Cow genome map
Conread name: | Utr1-UTR010045E09 |
Conread position: | 4-549 |
Cow position: | chr29:7840507-7841057 (view UCSC Genome Browser custom track) |
Alignm length: | 555 |
Alignm identity: | 411 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 292, 92 |
Conread position: | 4-564 |
Cow position: | chr29:30811244-30811798 (view UCSC Genome Browser custom track) |
Alignm length: | 568 |
Alignm identity: | 409 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 13, 88 |
Conread position: | 5-225 |
Cow position: | chr29:13578129-13578349 (view UCSC Genome Browser custom track) |
Alignm length: | 222 |
Alignm identity: | 162 |
Alignm E-value: | 2e-37 |
Alignm gaps (pig, cow): | 128, 84 |
Conread position: | 5-358 |
Cow position: | chr29:2368184-2367845 (view UCSC Genome Browser custom track) |
Alignm length: | 355 |
Alignm identity: | 235 |
Alignm E-value: | 4e-32 |
Alignm gaps (pig, cow): | 345, 15 |
Conread position: | 5-422 |
Cow position: | chr29:15969436-15969023 (view UCSC Genome Browser custom track) |
Alignm length: | 422 |
Alignm identity: | 318 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 290, 85 |
Conread position: | 5-521 |
Cow position: | chr29:1714962-1715474 (view UCSC Genome Browser custom track) |
Alignm length: | 526 |
Alignm identity: | 369 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 9, 90 |
Conread position: | 5-548 |
Cow position: | chr29:15895136-15894590 (view UCSC Genome Browser custom track) |
Alignm length: | 554 |
Alignm identity: | 421 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 293, 85 |
Conread position: | 5-562 |
Cow position: | chr29:20250871-20251433 (view UCSC Genome Browser custom track) |
Alignm length: | 568 |
Alignm identity: | 416 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 294, 85 |
Conread position: | 5-563 |
Cow position: | chr29:21543664-21543094 (view UCSC Genome Browser custom track) |
Alignm length: | 577 |
Alignm identity: | 425 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 8, 100 |
Conread position: | 6-174 |
Cow position: | chr29:9644008-9643844 (view UCSC Genome Browser custom track) |
Alignm length: | 169 |
Alignm identity: | 134 |
Alignm E-value: | 2e-35 |
Alignm gaps (pig, cow): | 84, 0 |
Conread position: | 6-265 |
Cow position: | chr29:12796751-12796503 (view UCSC Genome Browser custom track) |
Alignm length: | 260 |
Alignm identity: | 198 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 34, 0 |
Conread position: | 6-273 |
Cow position: | chr29:31121521-31121784 (view UCSC Genome Browser custom track) |
Alignm length: | 268 |
Alignm identity: | 199 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 43, 0 |
Conread position: | 6-388 |
Cow position: | chr29:21427342-21426962 (view UCSC Genome Browser custom track) |
Alignm length: | 386 |
Alignm identity: | 298 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 300, 82 |
Conread position: | 6-396 |
Cow position: | chr29:21246281-21246674 (view UCSC Genome Browser custom track) |
Alignm length: | 396 |
Alignm identity: | 301 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 110, 89 |
Conread position: | 6-402 |
Cow position: | chr29:39313877-39313481 (view UCSC Genome Browser custom track) |
Alignm length: | 401 |
Alignm identity: | 255 |
Alignm E-value: | 5e-35 |
Alignm gaps (pig, cow): | 142, 89 |
Conread position: | 6-403 |
Cow position: | chr29:28060953-28060553 (view UCSC Genome Browser custom track) |
Alignm length: | 402 |
Alignm identity: | 309 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 223, 83 |
Conread position: | 6-410 |
Cow position: | chr29:13853307-13852905 (view UCSC Genome Browser custom track) |
Alignm length: | 409 |
Alignm identity: | 327 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 296, 52 |
Conread position: | 6-469 |
Cow position: | chr29:16109442-16109908 (view UCSC Genome Browser custom track) |
Alignm length: | 473 |
Alignm identity: | 345 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 355, 84 |
Conread position: | 6-488 |
Cow position: | chr29:32315753-32316241 (view UCSC Genome Browser custom track) |
Alignm length: | 493 |
Alignm identity: | 358 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 296, 90 |
Conread position: | 6-528 |
Cow position: | chr29:10848403-10847852 (view UCSC Genome Browser custom track) |
Alignm length: | 559 |
Alignm identity: | 413 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 72, 42 |
Conread position: | 6-537 |
Cow position: | chr29:38226707-38227229 (view UCSC Genome Browser custom track) |
Alignm length: | 548 |
Alignm identity: | 402 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 108, 64 |
Conread position: | 6-547 |
Cow position: | chr29:15950466-15949932 (view UCSC Genome Browser custom track) |
Alignm length: | 550 |
Alignm identity: | 387 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 295, 62 |
Conread position: | 6-549 |
Cow position: | chr29:610898-610351 (view UCSC Genome Browser custom track) |
Alignm length: | 554 |
Alignm identity: | 408 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 296, 84 |
Conread position: | 6-549 |
Cow position: | chr29:35296591-35297135 (view UCSC Genome Browser custom track) |
Alignm length: | 555 |
Alignm identity: | 411 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 292, 53 |
Conread position: | 6-549 |
Cow position: | chr29:39079993-39079451 (view UCSC Genome Browser custom track) |
Alignm length: | 553 |
Alignm identity: | 419 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 355, 84 |
Conread position: | 6-558 |
Cow position: | chr29:104292-104834 (view UCSC Genome Browser custom track) |
Alignm length: | 563 |
Alignm identity: | 407 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 296, 69 |
Conread position: | 6-562 |
Cow position: | chr29:48763-48206 (view UCSC Genome Browser custom track) |
Alignm length: | 568 |
Alignm identity: | 423 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 225, 83 |
Conread position: | 6-562 |
Cow position: | chr29:7431503-7430945 (view UCSC Genome Browser custom track) |
Alignm length: | 566 |
Alignm identity: | 430 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 293, 84 |
Conread position: | 6-562 |
Cow position: | chr29:34800093-34799533 (view UCSC Genome Browser custom track) |
Alignm length: | 569 |
Alignm identity: | 422 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 296, 39 |
Conread position: | 6-563 |
Cow position: | chr29:2099557-2100120 (view UCSC Genome Browser custom track) |
Alignm length: | 568 |
Alignm identity: | 432 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 293, 84 |
Conread position: | 6-563 |
Cow position: | chr29:2689618-2690175 (view UCSC Genome Browser custom track) |
Alignm length: | 568 |
Alignm identity: | 431 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 156, 84 |
Conread position: | 6-563 |
Cow position: | chr29:2841652-2841098 (view UCSC Genome Browser custom track) |
Alignm length: | 567 |
Alignm identity: | 427 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 268, 84 |
Conread position: | 6-563 |
Cow position: | chr29:5957316-5957879 (view UCSC Genome Browser custom track) |
Alignm length: | 570 |
Alignm identity: | 416 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 296, 82 |
Conread position: | 6-563 |
Cow position: | chr29:6266779-6266226 (view UCSC Genome Browser custom track) |
Alignm length: | 567 |
Alignm identity: | 429 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 355, 29 |
Conread position: | 6-563 |
Cow position: | chr29:10648532-10647976 (view UCSC Genome Browser custom track) |
Alignm length: | 567 |
Alignm identity: | 418 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 293, 84 |
Conread position: | 6-563 |
Cow position: | chr29:11048996-11049553 (view UCSC Genome Browser custom track) |
Alignm length: | 570 |
Alignm identity: | 427 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 9, 20 |
Conread position: | 6-563 |
Cow position: | chr29:19623531-19622972 (view UCSC Genome Browser custom track) |
Alignm length: | 568 |
Alignm identity: | 427 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 293, 84 |
Conread position: | 6-563 |
Cow position: | chr29:19652821-19653383 (view UCSC Genome Browser custom track) |
Alignm length: | 571 |
Alignm identity: | 430 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 293, 83 |
Conread position: | 6-563 |
Cow position: | chr29:23975545-23976115 (view UCSC Genome Browser custom track) |
Alignm length: | 577 |
Alignm identity: | 433 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 104, 83 |
Conread position: | 6-563 |
Cow position: | chr29:25932831-25932269 (view UCSC Genome Browser custom track) |
Alignm length: | 568 |
Alignm identity: | 432 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 296, 84 |
Conread position: | 6-563 |
Cow position: | chr29:26165109-26164547 (view UCSC Genome Browser custom track) |
Alignm length: | 568 |
Alignm identity: | 437 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 296, 84 |
Conread position: | 6-563 |
Cow position: | chr29:27041047-27040497 (view UCSC Genome Browser custom track) |
Alignm length: | 567 |
Alignm identity: | 416 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 278, 89 |
Conread position: | 6-563 |
Cow position: | chr29:32539523-32540085 (view UCSC Genome Browser custom track) |
Alignm length: | 567 |
Alignm identity: | 423 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 293, 84 |
Conread position: | 6-563 |
Cow position: | chr29:43366283-43365727 (view UCSC Genome Browser custom track) |
Alignm length: | 573 |
Alignm identity: | 410 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 290, 17 |
Conread position: | 6-564 |
Cow position: | chr29:2750670-2750145 (view UCSC Genome Browser custom track) |
Alignm length: | 563 |
Alignm identity: | 398 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 296, 21 |
Conread position: | 6-566 |
Cow position: | chr29:16769845-16770400 (view UCSC Genome Browser custom track) |
Alignm length: | 570 |
Alignm identity: | 422 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 354, 84 |
Conread position: | 6-566 |
Cow position: | chr29:40503266-40502704 (view UCSC Genome Browser custom track) |
Alignm length: | 570 |
Alignm identity: | 425 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 293, 84 |
Conread position: | 6-566 |
Cow position: | chr29:43322272-43322834 (view UCSC Genome Browser custom track) |
Alignm length: | 567 |
Alignm identity: | 435 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 293, 89 |
Conread position: | 6-566 |
Cow position: | chr29:45459432-45459993 (view UCSC Genome Browser custom track) |
Alignm length: | 574 |
Alignm identity: | 429 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 293, 84 |
Conread position: | 6-567 |
Cow position: | chr29:27250622-27250063 (view UCSC Genome Browser custom track) |
Alignm length: | 567 |
Alignm identity: | 417 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 292, 84 |
Conread position: | 8-427 |
Cow position: | chr29:32220440-32220855 (view UCSC Genome Browser custom track) |
Alignm length: | 425 |
Alignm identity: | 259 |
Alignm E-value: | 4e-23 |
Alignm gaps (pig, cow): | 64, 57 |
Conread position: | 8-540 |
Cow position: | chr29:14073221-14072695 (view UCSC Genome Browser custom track) |
Alignm length: | 541 |
Alignm identity: | 364 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 182, 16 |
Conread position: | 9-167 |
Cow position: | chr29:2468224-2468057 (view UCSC Genome Browser custom track) |
Alignm length: | 168 |
Alignm identity: | 124 |
Alignm E-value: | 1e-23 |
Alignm gaps (pig, cow): | 79, 0 |
Conread position: | 9-563 |
Cow position: | chr29:10824243-10823694 (view UCSC Genome Browser custom track) |
Alignm length: | 566 |
Alignm identity: | 410 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 81, 283 |
Conread position: | 9-563 |
Cow position: | chr29:35196392-35196939 (view UCSC Genome Browser custom track) |
Alignm length: | 563 |
Alignm identity: | 425 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 68, 87 |
Conread position: | 10-301 |
Cow position: | chr29:32640505-32640785 (view UCSC Genome Browser custom track) |
Alignm length: | 293 |
Alignm identity: | 195 |
Alignm E-value: | 7e-28 |
Alignm gaps (pig, cow): | 208, 41 |
Conread position: | 12-380 |
Cow position: | chr29:31180842-31181212 (view UCSC Genome Browser custom track) |
Alignm length: | 374 |
Alignm identity: | 281 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 184, 78 |
Conread position: | 26-167 |
Cow position: | chr29:42650059-42650196 (view UCSC Genome Browser custom track) |
Alignm length: | 142 |
Alignm identity: | 106 |
Alignm E-value: | 1e-21 |
Alignm gaps (pig, cow): | 64, 0 |
Conread position: | 26-167 |
Cow position: | chr29:42801919-42802056 (view UCSC Genome Browser custom track) |
Alignm length: | 142 |
Alignm identity: | 106 |
Alignm E-value: | 1e-21 |
Alignm gaps (pig, cow): | 64, 0 |
Conread position: | 33-468 |
Cow position: | chr29:32948885-32949323 (view UCSC Genome Browser custom track) |
Alignm length: | 448 |
Alignm identity: | 277 |
Alignm E-value: | 4e-23 |
Alignm gaps (pig, cow): | 19, 27 |
Conread position: | 33-540 |
Cow position: | chr29:17662661-17663156 (view UCSC Genome Browser custom track) |
Alignm length: | 518 |
Alignm identity: | 341 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 62, 240 |
Conread position: | 34-563 |
Cow position: | chr29:16022272-16022805 (view UCSC Genome Browser custom track) |
Alignm length: | 538 |
Alignm identity: | 389 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 268, 56 |
Conread position: | 43-557 |
Cow position: | chr29:19884819-19885339 (view UCSC Genome Browser custom track) |
Alignm length: | 525 |
Alignm identity: | 349 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 259, 13 |
Conread position: | 48-406 |
Cow position: | chr29:11855354-11855709 (view UCSC Genome Browser custom track) |
Alignm length: | 364 |
Alignm identity: | 245 |
Alignm E-value: | 2e-39 |
Alignm gaps (pig, cow): | 240, 47 |
Conread position: | 52-410 |
Cow position: | chr29:4635207-4634857 (view UCSC Genome Browser custom track) |
Alignm length: | 363 |
Alignm identity: | 248 |
Alignm E-value: | 1.00053e-42 |
Alignm gaps (pig, cow): | 69, 43 |
Conread position: | 56-437 |
Cow position: | chr29:35283512-35283881 (view UCSC Genome Browser custom track) |
Alignm length: | 387 |
Alignm identity: | 246 |
Alignm E-value: | 5e-24 |
Alignm gaps (pig, cow): | 192, 81 |
Conread position: | 58-414 |
Cow position: | chr29:24198855-24198500 (view UCSC Genome Browser custom track) |
Alignm length: | 360 |
Alignm identity: | 242 |
Alignm E-value: | 4.06377e-44 |
Alignm gaps (pig, cow): | 63, 29 |
Conread position: | 91-549 |
Cow position: | chr29:27981123-27980658 (view UCSC Genome Browser custom track) |
Alignm length: | 471 |
Alignm identity: | 349 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 35, 256 |
Conread position: | 107-531 |
Cow position: | chr29:11841476-11841901 (view UCSC Genome Browser custom track) |
Alignm length: | 437 |
Alignm identity: | 292 |
Alignm E-value: | 3.00018e-42 |
Alignm gaps (pig, cow): | 11, 56 |
Conread position: | 141-378 |
Cow position: | chr29:5983333-5983094 (view UCSC Genome Browser custom track) |
Alignm length: | 243 |
Alignm identity: | 192 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 161, 55 |
Conread position: | 144-316 |
Cow position: | chr29:43791030-43791202 (view UCSC Genome Browser custom track) |
Alignm length: | 173 |
Alignm identity: | 137 |
Alignm E-value: | 7e-39 |
Alignm gaps (pig, cow): | 0, 0 |
Conread position: | 144-563 |
Cow position: | chr29:14585777-14586197 (view UCSC Genome Browser custom track) |
Alignm length: | 428 |
Alignm identity: | 321 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 155, 202 |
Conread position: | 155-476 |
Cow position: | chr29:13648278-13648584 (view UCSC Genome Browser custom track) |
Alignm length: | 324 |
Alignm identity: | 221 |
Alignm E-value: | 1e-31 |
Alignm gaps (pig, cow): | 207, 112 |
Conread position: | 162-549 |
Cow position: | chr29:670189-669796 (view UCSC Genome Browser custom track) |
Alignm length: | 398 |
Alignm identity: | 302 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 136, 183 |
Conread position: | 162-563 |
Cow position: | chr29:45587478-45587085 (view UCSC Genome Browser custom track) |
Alignm length: | 410 |
Alignm identity: | 293 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 201, 129 |
Conread position: | 200-549 |
Cow position: | chr29:18857039-18856683 (view UCSC Genome Browser custom track) |
Alignm length: | 360 |
Alignm identity: | 279 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 98, 145 |
Conread position: | 209-536 |
Cow position: | chr29:42650199-42650534 (view UCSC Genome Browser custom track) |
Alignm length: | 339 |
Alignm identity: | 252 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 94, 136 |
Conread position: | 209-536 |
Cow position: | chr29:42802059-42802394 (view UCSC Genome Browser custom track) |
Alignm length: | 339 |
Alignm identity: | 255 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 94, 136 |
Conread position: | 217-563 |
Cow position: | chr29:2466414-2466059 (view UCSC Genome Browser custom track) |
Alignm length: | 359 |
Alignm identity: | 263 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 85, 126 |
Conread position: | 221-549 |
Cow position: | chr29:13581998-13582329 (view UCSC Genome Browser custom track) |
Alignm length: | 335 |
Alignm identity: | 250 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 81, 131 |
Conread position: | 222-485 |
Cow position: | chr29:12796436-12796168 (view UCSC Genome Browser custom track) |
Alignm length: | 274 |
Alignm identity: | 199 |
Alignm E-value: | 7e-38 |
Alignm gaps (pig, cow): | 24, 59 |
Conread position: | 230-564 |
Cow position: | chr29:803416-803080 (view UCSC Genome Browser custom track) |
Alignm length: | 346 |
Alignm identity: | 240 |
Alignm E-value: | 8e-40 |
Alignm gaps (pig, cow): | 72, 24 |
Conread position: | 233-566 |
Cow position: | chr29:9643820-9643478 (view UCSC Genome Browser custom track) |
Alignm length: | 344 |
Alignm identity: | 263 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 69, 119 |
Conread position: | 272-563 |
Cow position: | chr29:410548-410250 (view UCSC Genome Browser custom track) |
Alignm length: | 302 |
Alignm identity: | 230 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 30, 80 |
Conread position: | 325-567 |
Cow position: | chr29:34925505-34925758 (view UCSC Genome Browser custom track) |
Alignm length: | 257 |
Alignm identity: | 189 |
Alignm E-value: | 2e-35 |
Alignm gaps (pig, cow): | 38, 26 |
Conread position: | 371-549 |
Cow position: | chr29:31181495-31181676 (view UCSC Genome Browser custom track) |
Alignm length: | 185 |
Alignm identity: | 139 |
Alignm E-value: | 2e-27 |
Alignm gaps (pig, cow): | 52, 24 |
Conread position: | 384-563 |
Cow position: | chr29:21426932-21426755 (view UCSC Genome Browser custom track) |
Alignm length: | 184 |
Alignm identity: | 135 |
Alignm E-value: | 5e-24 |
Alignm gaps (pig, cow): | 32, 123 |
Conread position: | 416-564 |
Cow position: | chr29:5983082-5982931 (view UCSC Genome Browser custom track) |
Alignm length: | 152 |
Alignm identity: | 111 |
Alignm E-value: | 3e-21 |
Alignm gaps (pig, cow): | 33, 0 |
Conread position: | 432-549 |
Cow position: | chr29:15968718-15968600 (view UCSC Genome Browser custom track) |
Alignm length: | 119 |
Alignm identity: | 95 |
Alignm E-value: | 1e-23 |
Alignm gaps (pig, cow): | 39, 0 |
Show alignments to all cow chromosomes.