Cow genome map


           Conread name:
           Utr1-UTR010045E09
        

               Conread position:
               4-549
               

               Cow position:
               
               

               Alignm length:
               555
               

               Alignm identity:
               411
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               292, 92
               

               Conread position:
               4-564
               

               Cow position:
               
               

               Alignm length:
               568
               

               Alignm identity:
               409
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               13, 88
               

               Conread position:
               5-225
               

               Cow position:
               
               

               Alignm length:
               222
               

               Alignm identity:
               162
               

               Alignm E-value:
               2e-37
               

               Alignm gaps (pig, cow):
               128, 84
               

               Conread position:
               5-358
               

               Cow position:
               
               

               Alignm length:
               355
               

               Alignm identity:
               235
               

               Alignm E-value:
               4e-32
               

               Alignm gaps (pig, cow):
               345, 15
               

               Conread position:
               5-422
               

               Cow position:
               
               

               Alignm length:
               422
               

               Alignm identity:
               318
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               290, 85
               

               Conread position:
               5-521
               

               Cow position:
               
               

               Alignm length:
               526
               

               Alignm identity:
               369
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               9, 90
               

               Conread position:
               5-548
               

               Cow position:
               
               

               Alignm length:
               554
               

               Alignm identity:
               421
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               293, 85
               

               Conread position:
               5-562
               

               Cow position:
               
               

               Alignm length:
               568
               

               Alignm identity:
               416
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               294, 85
               

               Conread position:
               5-563
               

               Cow position:
               
               

               Alignm length:
               577
               

               Alignm identity:
               425
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               8, 100
               

               Conread position:
               6-174
               

               Cow position:
               
               

               Alignm length:
               169
               

               Alignm identity:
               134
               

               Alignm E-value:
               2e-35
               

               Alignm gaps (pig, cow):
               84, 0
               

               Conread position:
               6-265
               

               Cow position:
               
               

               Alignm length:
               260
               

               Alignm identity:
               198
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               34, 0
               

               Conread position:
               6-273
               

               Cow position:
               
               

               Alignm length:
               268
               

               Alignm identity:
               199
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               43, 0
               

               Conread position:
               6-388
               

               Cow position:
               
               

               Alignm length:
               386
               

               Alignm identity:
               298
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               300, 82
               

               Conread position:
               6-396
               

               Cow position:
               
               

               Alignm length:
               396
               

               Alignm identity:
               301
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               110, 89
               

               Conread position:
               6-402
               

               Cow position:
               
               

               Alignm length:
               401
               

               Alignm identity:
               255
               

               Alignm E-value:
               5e-35
               

               Alignm gaps (pig, cow):
               142, 89
               

               Conread position:
               6-403
               

               Cow position:
               
               

               Alignm length:
               402
               

               Alignm identity:
               309
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               223, 83
               

               Conread position:
               6-410
               

               Cow position:
               
               

               Alignm length:
               409
               

               Alignm identity:
               327
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               296, 52
               

               Conread position:
               6-469
               

               Cow position:
               
               

               Alignm length:
               473
               

               Alignm identity:
               345
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               355, 84
               

               Conread position:
               6-488
               

               Cow position:
               
               

               Alignm length:
               493
               

               Alignm identity:
               358
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               296, 90
               

               Conread position:
               6-528
               

               Cow position:
               
               

               Alignm length:
               559
               

               Alignm identity:
               413
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               72, 42
               

               Conread position:
               6-537
               

               Cow position:
               
               

               Alignm length:
               548
               

               Alignm identity:
               402
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               108, 64
               

               Conread position:
               6-547
               

               Cow position:
               
               

               Alignm length:
               550
               

               Alignm identity:
               387
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               295, 62
               

               Conread position:
               6-549
               

               Cow position:
               
               

               Alignm length:
               554
               

               Alignm identity:
               408
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               296, 84
               

               Conread position:
               6-549
               

               Cow position:
               
               

               Alignm length:
               555
               

               Alignm identity:
               411
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               292, 53
               

               Conread position:
               6-549
               

               Cow position:
               
               

               Alignm length:
               553
               

               Alignm identity:
               419
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               355, 84
               

               Conread position:
               6-558
               

               Cow position:
               
               

               Alignm length:
               563
               

               Alignm identity:
               407
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               296, 69
               

               Conread position:
               6-562
               

               Cow position:
               
               

               Alignm length:
               568
               

               Alignm identity:
               423
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               225, 83
               

               Conread position:
               6-562
               

               Cow position:
               
               

               Alignm length:
               566
               

               Alignm identity:
               430
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               293, 84
               

               Conread position:
               6-562
               

               Cow position:
               
               

               Alignm length:
               569
               

               Alignm identity:
               422
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               296, 39
               

               Conread position:
               6-563
               

               Cow position:
               
               

               Alignm length:
               568
               

               Alignm identity:
               432
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               293, 84
               

               Conread position:
               6-563
               

               Cow position:
               
               

               Alignm length:
               568
               

               Alignm identity:
               431
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               156, 84
               

               Conread position:
               6-563
               

               Cow position:
               
               

               Alignm length:
               567
               

               Alignm identity:
               427
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               268, 84
               

               Conread position:
               6-563
               

               Cow position:
               
               

               Alignm length:
               570
               

               Alignm identity:
               416
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               296, 82
               

               Conread position:
               6-563
               

               Cow position:
               
               

               Alignm length:
               567
               

               Alignm identity:
               429
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               355, 29
               

               Conread position:
               6-563
               

               Cow position:
               
               

               Alignm length:
               567
               

               Alignm identity:
               418
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               293, 84
               

               Conread position:
               6-563
               

               Cow position:
               
               

               Alignm length:
               570
               

               Alignm identity:
               427
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               9, 20
               

               Conread position:
               6-563
               

               Cow position:
               
               

               Alignm length:
               568
               

               Alignm identity:
               427
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               293, 84
               

               Conread position:
               6-563
               

               Cow position:
               
               

               Alignm length:
               571
               

               Alignm identity:
               430
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               293, 83
               

               Conread position:
               6-563
               

               Cow position:
               
               

               Alignm length:
               577
               

               Alignm identity:
               433
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               104, 83
               

               Conread position:
               6-563
               

               Cow position:
               
               

               Alignm length:
               568
               

               Alignm identity:
               432
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               296, 84
               

               Conread position:
               6-563
               

               Cow position:
               
               

               Alignm length:
               568
               

               Alignm identity:
               437
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               296, 84
               

               Conread position:
               6-563
               

               Cow position:
               
               

               Alignm length:
               567
               

               Alignm identity:
               416
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               278, 89
               

               Conread position:
               6-563
               

               Cow position:
               
               

               Alignm length:
               567
               

               Alignm identity:
               423
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               293, 84
               

               Conread position:
               6-563
               

               Cow position:
               
               

               Alignm length:
               573
               

               Alignm identity:
               410
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               290, 17
               

               Conread position:
               6-564
               

               Cow position:
               
               

               Alignm length:
               563
               

               Alignm identity:
               398
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               296, 21
               

               Conread position:
               6-566
               

               Cow position:
               
               

               Alignm length:
               570
               

               Alignm identity:
               422
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               354, 84
               

               Conread position:
               6-566
               

               Cow position:
               
               

               Alignm length:
               570
               

               Alignm identity:
               425
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               293, 84
               

               Conread position:
               6-566
               

               Cow position:
               
               

               Alignm length:
               567
               

               Alignm identity:
               435
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               293, 89
               

               Conread position:
               6-566
               

               Cow position:
               
               

               Alignm length:
               574
               

               Alignm identity:
               429
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               293, 84
               

               Conread position:
               6-567
               

               Cow position:
               
               

               Alignm length:
               567
               

               Alignm identity:
               417
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               292, 84
               

               Conread position:
               8-427
               

               Cow position:
               
               

               Alignm length:
               425
               

               Alignm identity:
               259
               

               Alignm E-value:
               4e-23
               

               Alignm gaps (pig, cow):
               64, 57
               

               Conread position:
               8-540
               

               Cow position:
               
               

               Alignm length:
               541
               

               Alignm identity:
               364
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               182, 16
               

               Conread position:
               9-167
               

               Cow position:
               
               

               Alignm length:
               168
               

               Alignm identity:
               124
               

               Alignm E-value:
               1e-23
               

               Alignm gaps (pig, cow):
               79, 0
               

               Conread position:
               9-563
               

               Cow position:
               
               

               Alignm length:
               566
               

               Alignm identity:
               410
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               81, 283
               

               Conread position:
               9-563
               

               Cow position:
               
               

               Alignm length:
               563
               

               Alignm identity:
               425
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               68, 87
               

               Conread position:
               10-301
               

               Cow position:
               
               

               Alignm length:
               293
               

               Alignm identity:
               195
               

               Alignm E-value:
               7e-28
               

               Alignm gaps (pig, cow):
               208, 41
               

               Conread position:
               12-380
               

               Cow position:
               
               

               Alignm length:
               374
               

               Alignm identity:
               281
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               184, 78
               

               Conread position:
               26-167
               

               Cow position:
               
               

               Alignm length:
               142
               

               Alignm identity:
               106
               

               Alignm E-value:
               1e-21
               

               Alignm gaps (pig, cow):
               64, 0
               

               Conread position:
               26-167
               

               Cow position:
               
               

               Alignm length:
               142
               

               Alignm identity:
               106
               

               Alignm E-value:
               1e-21
               

               Alignm gaps (pig, cow):
               64, 0
               

               Conread position:
               33-468
               

               Cow position:
               
               

               Alignm length:
               448
               

               Alignm identity:
               277
               

               Alignm E-value:
               4e-23
               

               Alignm gaps (pig, cow):
               19, 27
               

               Conread position:
               33-540
               

               Cow position:
               
               

               Alignm length:
               518
               

               Alignm identity:
               341
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               62, 240
               

               Conread position:
               34-563
               

               Cow position:
               
               

               Alignm length:
               538
               

               Alignm identity:
               389
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               268, 56
               

               Conread position:
               43-557
               

               Cow position:
               
               

               Alignm length:
               525
               

               Alignm identity:
               349
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               259, 13
               

               Conread position:
               48-406
               

               Cow position:
               
               

               Alignm length:
               364
               

               Alignm identity:
               245
               

               Alignm E-value:
               2e-39
               

               Alignm gaps (pig, cow):
               240, 47
               

               Conread position:
               52-410
               

               Cow position:
               
               

               Alignm length:
               363
               

               Alignm identity:
               248
               

               Alignm E-value:
               1.00053e-42
               

               Alignm gaps (pig, cow):
               69, 43
               

               Conread position:
               56-437
               

               Cow position:
               
               

               Alignm length:
               387
               

               Alignm identity:
               246
               

               Alignm E-value:
               5e-24
               

               Alignm gaps (pig, cow):
               192, 81
               

               Conread position:
               58-414
               

               Cow position:
               
               

               Alignm length:
               360
               

               Alignm identity:
               242
               

               Alignm E-value:
               4.06377e-44
               

               Alignm gaps (pig, cow):
               63, 29
               

               Conread position:
               91-549
               

               Cow position:
               
               

               Alignm length:
               471
               

               Alignm identity:
               349
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               35, 256
               

               Conread position:
               107-531
               

               Cow position:
               
               

               Alignm length:
               437
               

               Alignm identity:
               292
               

               Alignm E-value:
               3.00018e-42
               

               Alignm gaps (pig, cow):
               11, 56
               

               Conread position:
               141-378
               

               Cow position:
               
               

               Alignm length:
               243
               

               Alignm identity:
               192
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               161, 55
               

               Conread position:
               144-316
               

               Cow position:
               
               

               Alignm length:
               173
               

               Alignm identity:
               137
               

               Alignm E-value:
               7e-39
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               144-563
               

               Cow position:
               
               

               Alignm length:
               428
               

               Alignm identity:
               321
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               155, 202
               

               Conread position:
               155-476
               

               Cow position:
               
               

               Alignm length:
               324
               

               Alignm identity:
               221
               

               Alignm E-value:
               1e-31
               

               Alignm gaps (pig, cow):
               207, 112
               

               Conread position:
               162-549
               

               Cow position:
               
               

               Alignm length:
               398
               

               Alignm identity:
               302
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               136, 183
               

               Conread position:
               162-563
               

               Cow position:
               
               

               Alignm length:
               410
               

               Alignm identity:
               293
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               201, 129
               

               Conread position:
               200-549
               

               Cow position:
               
               

               Alignm length:
               360
               

               Alignm identity:
               279
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               98, 145
               

               Conread position:
               209-536
               

               Cow position:
               
               

               Alignm length:
               339
               

               Alignm identity:
               252
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               94, 136
               

               Conread position:
               209-536
               

               Cow position:
               
               

               Alignm length:
               339
               

               Alignm identity:
               255
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               94, 136
               

               Conread position:
               217-563
               

               Cow position:
               
               

               Alignm length:
               359
               

               Alignm identity:
               263
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               85, 126
               

               Conread position:
               221-549
               

               Cow position:
               
               

               Alignm length:
               335
               

               Alignm identity:
               250
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               81, 131
               

               Conread position:
               222-485
               

               Cow position:
               
               

               Alignm length:
               274
               

               Alignm identity:
               199
               

               Alignm E-value:
               7e-38
               

               Alignm gaps (pig, cow):
               24, 59
               

               Conread position:
               230-564
               

               Cow position:
               
               

               Alignm length:
               346
               

               Alignm identity:
               240
               

               Alignm E-value:
               8e-40
               

               Alignm gaps (pig, cow):
               72, 24
               

               Conread position:
               233-566
               

               Cow position:
               
               

               Alignm length:
               344
               

               Alignm identity:
               263
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               69, 119
               

               Conread position:
               272-563
               

               Cow position:
               
               

               Alignm length:
               302
               

               Alignm identity:
               230
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               30, 80
               

               Conread position:
               325-567
               

               Cow position:
               
               

               Alignm length:
               257
               

               Alignm identity:
               189
               

               Alignm E-value:
               2e-35
               

               Alignm gaps (pig, cow):
               38, 26
               

               Conread position:
               371-549
               

               Cow position:
               
               

               Alignm length:
               185
               

               Alignm identity:
               139
               

               Alignm E-value:
               2e-27
               

               Alignm gaps (pig, cow):
               52, 24
               

               Conread position:
               384-563
               

               Cow position:
               
               

               Alignm length:
               184
               

               Alignm identity:
               135
               

               Alignm E-value:
               5e-24
               

               Alignm gaps (pig, cow):
               32, 123
               

               Conread position:
               416-564
               

               Cow position:
               
               

               Alignm length:
               152
               

               Alignm identity:
               111
               

               Alignm E-value:
               3e-21
               

               Alignm gaps (pig, cow):
               33, 0
               

               Conread position:
               432-549
               

               Cow position:
               
               

               Alignm length:
               119
               

               Alignm identity:
               95
               

               Alignm E-value:
               1e-23
               

               Alignm gaps (pig, cow):
               39, 0
               
Show alignments to all cow chromosomes.