Cow genome map

Conread name: Utr1-UTR010045E09

Conread position: 4-258
Cow position: chr3:36691559-36691311 (view UCSC Genome Browser custom track)
Alignm length: 255
Alignm identity: 190
Alignm E-value: 1.4013e-45
Alignm gaps (pig, cow): 86, 0

Conread position: 4-564
Cow position: chr3:4026904-4027467 (view UCSC Genome Browser custom track)
Alignm length: 573
Alignm identity: 423
Alignm E-value: 0
Alignm gaps (pig, cow): 132, 91

Conread position: 5-157
Cow position: chr3:19802053-19802204 (view UCSC Genome Browser custom track)
Alignm length: 153
Alignm identity: 119
Alignm E-value: 5e-30
Alignm gaps (pig, cow): 86, 0

Conread position: 5-237
Cow position: chr3:14588313-14588544 (view UCSC Genome Browser custom track)
Alignm length: 234
Alignm identity: 170
Alignm E-value: 4e-38
Alignm gaps (pig, cow): 179, 68

Conread position: 5-281
Cow position: chr3:17951992-17952266 (view UCSC Genome Browser custom track)
Alignm length: 278
Alignm identity: 203
Alignm E-value: 0
Alignm gaps (pig, cow): 26, 10

Conread position: 5-489
Cow position: chr3:17829017-17828530 (view UCSC Genome Browser custom track)
Alignm length: 495
Alignm identity: 373
Alignm E-value: 0
Alignm gaps (pig, cow): 293, 85

Conread position: 5-563
Cow position: chr3:2633558-2634113 (view UCSC Genome Browser custom track)
Alignm length: 567
Alignm identity: 420
Alignm E-value: 0
Alignm gaps (pig, cow): 299, 90

Conread position: 5-563
Cow position: chr3:55230062-55229508 (view UCSC Genome Browser custom track)
Alignm length: 569
Alignm identity: 434
Alignm E-value: 0
Alignm gaps (pig, cow): 356, 13

Conread position: 5-563
Cow position: chr3:57499881-57499353 (view UCSC Genome Browser custom track)
Alignm length: 563
Alignm identity: 402
Alignm E-value: 0
Alignm gaps (pig, cow): 136, 46

Conread position: 6-132
Cow position: chr3:66618817-66618939 (view UCSC Genome Browser custom track)
Alignm length: 127
Alignm identity: 98
Alignm E-value: 6e-21
Alignm gaps (pig, cow): 84, 0

Conread position: 6-162
Cow position: chr3:14440097-14439943 (view UCSC Genome Browser custom track)
Alignm length: 157
Alignm identity: 122
Alignm E-value: 5e-30
Alignm gaps (pig, cow): 50, 0

Conread position: 6-167
Cow position: chr3:7168235-7168394 (view UCSC Genome Browser custom track)
Alignm length: 162
Alignm identity: 121
Alignm E-value: 4e-27
Alignm gaps (pig, cow): 92, 0

Conread position: 6-225
Cow position: chr3:52865115-52864901 (view UCSC Genome Browser custom track)
Alignm length: 220
Alignm identity: 171
Alignm E-value: 8.40779e-45
Alignm gaps (pig, cow): 38, 0

Conread position: 6-271
Cow position: chr3:49677393-49677651 (view UCSC Genome Browser custom track)
Alignm length: 267
Alignm identity: 191
Alignm E-value: 1e-37
Alignm gaps (pig, cow): 142, 27

Conread position: 6-274
Cow position: chr3:56650633-56650371 (view UCSC Genome Browser custom track)
Alignm length: 269
Alignm identity: 207
Alignm E-value: 0
Alignm gaps (pig, cow): 78, 0

Conread position: 6-280
Cow position: chr3:49545542-49545274 (view UCSC Genome Browser custom track)
Alignm length: 276
Alignm identity: 198
Alignm E-value: 1.99993e-41
Alignm gaps (pig, cow): 268, 84

Conread position: 6-293
Cow position: chr3:19938544-19938829 (view UCSC Genome Browser custom track)
Alignm length: 288
Alignm identity: 216
Alignm E-value: 0
Alignm gaps (pig, cow): 84, 0

Conread position: 6-293
Cow position: chr3:39326322-39326603 (view UCSC Genome Browser custom track)
Alignm length: 289
Alignm identity: 217
Alignm E-value: 0
Alignm gaps (pig, cow): 108, 80

Conread position: 6-295
Cow position: chr3:40340330-40340044 (view UCSC Genome Browser custom track)
Alignm length: 291
Alignm identity: 175
Alignm E-value: 5e-39
Alignm gaps (pig, cow): 265, 84

Conread position: 6-321
Cow position: chr3:47273335-47273048 (view UCSC Genome Browser custom track)
Alignm length: 317
Alignm identity: 232
Alignm E-value: 7.00649e-43
Alignm gaps (pig, cow): 293, 84

Conread position: 6-349
Cow position: chr3:72704828-72705171 (view UCSC Genome Browser custom track)
Alignm length: 345
Alignm identity: 260
Alignm E-value: 0
Alignm gaps (pig, cow): 292, 84

Conread position: 6-358
Cow position: chr3:7322947-7323292 (view UCSC Genome Browser custom track)
Alignm length: 357
Alignm identity: 232
Alignm E-value: 4e-28
Alignm gaps (pig, cow): 87, 93

Conread position: 6-375
Cow position: chr3:4285516-4285887 (view UCSC Genome Browser custom track)
Alignm length: 374
Alignm identity: 289
Alignm E-value: 0
Alignm gaps (pig, cow): 292, 84

Conread position: 6-376
Cow position: chr3:63005518-63005144 (view UCSC Genome Browser custom track)
Alignm length: 378
Alignm identity: 288
Alignm E-value: 0
Alignm gaps (pig, cow): 58, 71

Conread position: 6-403
Cow position: chr3:80871538-80871924 (view UCSC Genome Browser custom track)
Alignm length: 402
Alignm identity: 275
Alignm E-value: 0
Alignm gaps (pig, cow): 296, 84

Conread position: 6-426
Cow position: chr3:37968715-37969129 (view UCSC Genome Browser custom track)
Alignm length: 425
Alignm identity: 317
Alignm E-value: 0
Alignm gaps (pig, cow): 296, 84

Conread position: 6-427
Cow position: chr3:21945771-21945358 (view UCSC Genome Browser custom track)
Alignm length: 426
Alignm identity: 309
Alignm E-value: 0
Alignm gaps (pig, cow): 268, 84

Conread position: 6-464
Cow position: chr3:46678282-46677821 (view UCSC Genome Browser custom track)
Alignm length: 468
Alignm identity: 350
Alignm E-value: 0
Alignm gaps (pig, cow): 292, 84

Conread position: 6-469
Cow position: chr3:38866039-38866493 (view UCSC Genome Browser custom track)
Alignm length: 473
Alignm identity: 361
Alignm E-value: 0
Alignm gaps (pig, cow): 293, 34

Conread position: 6-469
Cow position: chr3:43040061-43039608 (view UCSC Genome Browser custom track)
Alignm length: 472
Alignm identity: 350
Alignm E-value: 0
Alignm gaps (pig, cow): 296, 84

Conread position: 6-473
Cow position: chr3:57856367-57856840 (view UCSC Genome Browser custom track)
Alignm length: 478
Alignm identity: 361
Alignm E-value: 0
Alignm gaps (pig, cow): 292, 84

Conread position: 6-476
Cow position: chr3:54865060-54864593 (view UCSC Genome Browser custom track)
Alignm length: 480
Alignm identity: 349
Alignm E-value: 0
Alignm gaps (pig, cow): 141, 62

Conread position: 6-492
Cow position: chr3:32146454-32145970 (view UCSC Genome Browser custom track)
Alignm length: 496
Alignm identity: 375
Alignm E-value: 0
Alignm gaps (pig, cow): 292, 84

Conread position: 6-505
Cow position: chr3:5047552-5047049 (view UCSC Genome Browser custom track)
Alignm length: 508
Alignm identity: 390
Alignm E-value: 0
Alignm gaps (pig, cow): 292, 13

Conread position: 6-517
Cow position: chr3:23291774-23291256 (view UCSC Genome Browser custom track)
Alignm length: 525
Alignm identity: 383
Alignm E-value: 0
Alignm gaps (pig, cow): 293, 84

Conread position: 6-531
Cow position: chr3:18811134-18811664 (view UCSC Genome Browser custom track)
Alignm length: 535
Alignm identity: 409
Alignm E-value: 0
Alignm gaps (pig, cow): 206, 78

Conread position: 6-536
Cow position: chr3:30314191-30314732 (view UCSC Genome Browser custom track)
Alignm length: 552
Alignm identity: 408
Alignm E-value: 0
Alignm gaps (pig, cow): 157, 84

Conread position: 6-537
Cow position: chr3:5883171-5883706 (view UCSC Genome Browser custom track)
Alignm length: 541
Alignm identity: 415
Alignm E-value: 0
Alignm gaps (pig, cow): 140, 84

Conread position: 6-538
Cow position: chr3:2711327-2710794 (view UCSC Genome Browser custom track)
Alignm length: 543
Alignm identity: 410
Alignm E-value: 0
Alignm gaps (pig, cow): 296, 84

Conread position: 6-538
Cow position: chr3:56340789-56340259 (view UCSC Genome Browser custom track)
Alignm length: 543
Alignm identity: 408
Alignm E-value: 0
Alignm gaps (pig, cow): 296, 82

Conread position: 6-547
Cow position: chr3:19878293-19878835 (view UCSC Genome Browser custom track)
Alignm length: 551
Alignm identity: 413
Alignm E-value: 0
Alignm gaps (pig, cow): 355, 90

Conread position: 6-549
Cow position: chr3:2917093-2917640 (view UCSC Genome Browser custom track)
Alignm length: 554
Alignm identity: 424
Alignm E-value: 0
Alignm gaps (pig, cow): 292, 84

Conread position: 6-549
Cow position: chr3:6782021-6782563 (view UCSC Genome Browser custom track)
Alignm length: 554
Alignm identity: 406
Alignm E-value: 0
Alignm gaps (pig, cow): 296, 84

Conread position: 6-549
Cow position: chr3:22335523-22336067 (view UCSC Genome Browser custom track)
Alignm length: 553
Alignm identity: 426
Alignm E-value: 0
Alignm gaps (pig, cow): 292, 84

Conread position: 6-549
Cow position: chr3:41212107-41211558 (view UCSC Genome Browser custom track)
Alignm length: 554
Alignm identity: 417
Alignm E-value: 0
Alignm gaps (pig, cow): 290, 84

Conread position: 6-549
Cow position: chr3:45032372-45032920 (view UCSC Genome Browser custom track)
Alignm length: 554
Alignm identity: 419
Alignm E-value: 0
Alignm gaps (pig, cow): 292, 84

Conread position: 6-549
Cow position: chr3:46861667-46861124 (view UCSC Genome Browser custom track)
Alignm length: 553
Alignm identity: 409
Alignm E-value: 0
Alignm gaps (pig, cow): 296, 84

Conread position: 6-549
Cow position: chr3:49614346-49613798 (view UCSC Genome Browser custom track)
Alignm length: 554
Alignm identity: 414
Alignm E-value: 0
Alignm gaps (pig, cow): 292, 84

Conread position: 6-549
Cow position: chr3:56320941-56321494 (view UCSC Genome Browser custom track)
Alignm length: 557
Alignm identity: 410
Alignm E-value: 0
Alignm gaps (pig, cow): 84, 180

Conread position: 6-557
Cow position: chr3:66891330-66890776 (view UCSC Genome Browser custom track)
Alignm length: 562
Alignm identity: 418
Alignm E-value: 0
Alignm gaps (pig, cow): 296, 55

Conread position: 6-558
Cow position: chr3:24591979-24591439 (view UCSC Genome Browser custom track)
Alignm length: 576
Alignm identity: 415
Alignm E-value: 0
Alignm gaps (pig, cow): 296, 17

Conread position: 6-559
Cow position: chr3:3522645-3523210 (view UCSC Genome Browser custom track)
Alignm length: 570
Alignm identity: 418
Alignm E-value: 0
Alignm gaps (pig, cow): 262, 90

Conread position: 6-559
Cow position: chr3:58947088-58947646 (view UCSC Genome Browser custom track)
Alignm length: 566
Alignm identity: 441
Alignm E-value: 0
Alignm gaps (pig, cow): 178, 67

Conread position: 6-560
Cow position: chr3:3980020-3980574 (view UCSC Genome Browser custom track)
Alignm length: 566
Alignm identity: 399
Alignm E-value: 0
Alignm gaps (pig, cow): 174, 89

Conread position: 6-561
Cow position: chr3:10239283-10239840 (view UCSC Genome Browser custom track)
Alignm length: 566
Alignm identity: 430
Alignm E-value: 0
Alignm gaps (pig, cow): 293, 84

Conread position: 6-562
Cow position: chr3:24314109-24314661 (view UCSC Genome Browser custom track)
Alignm length: 567
Alignm identity: 420
Alignm E-value: 0
Alignm gaps (pig, cow): 355, 84

Conread position: 6-562
Cow position: chr3:26949148-26949704 (view UCSC Genome Browser custom track)
Alignm length: 570
Alignm identity: 418
Alignm E-value: 0
Alignm gaps (pig, cow): 202, 49

Conread position: 6-562
Cow position: chr3:40823019-40823579 (view UCSC Genome Browser custom track)
Alignm length: 566
Alignm identity: 431
Alignm E-value: 0
Alignm gaps (pig, cow): 293, 84

Conread position: 6-562
Cow position: chr3:47179573-47179011 (view UCSC Genome Browser custom track)
Alignm length: 568
Alignm identity: 422
Alignm E-value: 0
Alignm gaps (pig, cow): 278, 84

Conread position: 6-562
Cow position: chr3:59860996-59861558 (view UCSC Genome Browser custom track)
Alignm length: 568
Alignm identity: 433
Alignm E-value: 0
Alignm gaps (pig, cow): 293, 84

Conread position: 6-562
Cow position: chr3:72629702-72630262 (view UCSC Genome Browser custom track)
Alignm length: 567
Alignm identity: 434
Alignm E-value: 0
Alignm gaps (pig, cow): 293, 84

Conread position: 6-563
Cow position: chr3:207529-206968 (view UCSC Genome Browser custom track)
Alignm length: 570
Alignm identity: 435
Alignm E-value: 0
Alignm gaps (pig, cow): 292, 85

Conread position: 6-563
Cow position: chr3:594220-594769 (view UCSC Genome Browser custom track)
Alignm length: 568
Alignm identity: 422
Alignm E-value: 0
Alignm gaps (pig, cow): 296, 83

Conread position: 6-563
Cow position: chr3:2653741-2654295 (view UCSC Genome Browser custom track)
Alignm length: 568
Alignm identity: 438
Alignm E-value: 0
Alignm gaps (pig, cow): 292, 84

Conread position: 6-563
Cow position: chr3:5954556-5953993 (view UCSC Genome Browser custom track)
Alignm length: 566
Alignm identity: 407
Alignm E-value: 0
Alignm gaps (pig, cow): 296, 84

Conread position: 6-563
Cow position: chr3:9716442-9717003 (view UCSC Genome Browser custom track)
Alignm length: 568
Alignm identity: 430
Alignm E-value: 0
Alignm gaps (pig, cow): 126, 89

Conread position: 6-563
Cow position: chr3:18542777-18542215 (view UCSC Genome Browser custom track)
Alignm length: 568
Alignm identity: 431
Alignm E-value: 0
Alignm gaps (pig, cow): 296, 84

Conread position: 6-563
Cow position: chr3:19757329-19756766 (view UCSC Genome Browser custom track)
Alignm length: 568
Alignm identity: 434
Alignm E-value: 0
Alignm gaps (pig, cow): 293, 84

Conread position: 6-563
Cow position: chr3:21183051-21182494 (view UCSC Genome Browser custom track)
Alignm length: 567
Alignm identity: 426
Alignm E-value: 0
Alignm gaps (pig, cow): 293, 84

Conread position: 6-563
Cow position: chr3:31354622-31354072 (view UCSC Genome Browser custom track)
Alignm length: 567
Alignm identity: 423
Alignm E-value: 0
Alignm gaps (pig, cow): 355, 13

Conread position: 6-563
Cow position: chr3:31898342-31897784 (view UCSC Genome Browser custom track)
Alignm length: 566
Alignm identity: 425
Alignm E-value: 0
Alignm gaps (pig, cow): 76, 90

Conread position: 6-563
Cow position: chr3:34031266-34030706 (view UCSC Genome Browser custom track)
Alignm length: 568
Alignm identity: 419
Alignm E-value: 0
Alignm gaps (pig, cow): 296, 90

Conread position: 6-563
Cow position: chr3:36127025-36127586 (view UCSC Genome Browser custom track)
Alignm length: 573
Alignm identity: 403
Alignm E-value: 0
Alignm gaps (pig, cow): 244, 12

Conread position: 6-563
Cow position: chr3:36882281-36881729 (view UCSC Genome Browser custom track)
Alignm length: 568
Alignm identity: 426
Alignm E-value: 0
Alignm gaps (pig, cow): 296, 92

Conread position: 6-563
Cow position: chr3:57485092-57484537 (view UCSC Genome Browser custom track)
Alignm length: 565
Alignm identity: 428
Alignm E-value: 0
Alignm gaps (pig, cow): 296, 64

Conread position: 6-563
Cow position: chr3:64017733-64017172 (view UCSC Genome Browser custom track)
Alignm length: 569
Alignm identity: 434
Alignm E-value: 0
Alignm gaps (pig, cow): 253, 83

Conread position: 6-563
Cow position: chr3:69933028-69933587 (view UCSC Genome Browser custom track)
Alignm length: 568
Alignm identity: 423
Alignm E-value: 0
Alignm gaps (pig, cow): 293, 84

Conread position: 6-563
Cow position: chr3:77474393-77474955 (view UCSC Genome Browser custom track)
Alignm length: 569
Alignm identity: 425
Alignm E-value: 0
Alignm gaps (pig, cow): 243, 89

Conread position: 6-563
Cow position: chr3:78027780-78027217 (view UCSC Genome Browser custom track)
Alignm length: 568
Alignm identity: 437
Alignm E-value: 0
Alignm gaps (pig, cow): 293, 84

Conread position: 6-564
Cow position: chr3:3054243-3054790 (view UCSC Genome Browser custom track)
Alignm length: 566
Alignm identity: 410
Alignm E-value: 0
Alignm gaps (pig, cow): 296, 79

Conread position: 6-564
Cow position: chr3:36099083-36098525 (view UCSC Genome Browser custom track)
Alignm length: 573
Alignm identity: 379
Alignm E-value: 0
Alignm gaps (pig, cow): 46, 13

Conread position: 6-565
Cow position: chr3:472169-472727 (view UCSC Genome Browser custom track)
Alignm length: 569
Alignm identity: 435
Alignm E-value: 0
Alignm gaps (pig, cow): 12, 43

Conread position: 6-567
Cow position: chr3:5829998-5829432 (view UCSC Genome Browser custom track)
Alignm length: 571
Alignm identity: 438
Alignm E-value: 0
Alignm gaps (pig, cow): 290, 89

Conread position: 6-567
Cow position: chr3:36117293-36117860 (view UCSC Genome Browser custom track)
Alignm length: 577
Alignm identity: 404
Alignm E-value: 0
Alignm gaps (pig, cow): 84, 384

Conread position: 6-567
Cow position: chr3:42580334-42579772 (view UCSC Genome Browser custom track)
Alignm length: 571
Alignm identity: 429
Alignm E-value: 0
Alignm gaps (pig, cow): 355, 89

Conread position: 6-570
Cow position: chr3:64028452-64027885 (view UCSC Genome Browser custom track)
Alignm length: 576
Alignm identity: 434
Alignm E-value: 0
Alignm gaps (pig, cow): 292, 84

Conread position: 7-538
Cow position: chr3:70084011-70083486 (view UCSC Genome Browser custom track)
Alignm length: 543
Alignm identity: 408
Alignm E-value: 0
Alignm gaps (pig, cow): 291, 48

Conread position: 7-549
Cow position: chr3:42431864-42432410 (view UCSC Genome Browser custom track)
Alignm length: 555
Alignm identity: 414
Alignm E-value: 0
Alignm gaps (pig, cow): 83, 170

Conread position: 7-557
Cow position: chr3:64650263-64650813 (view UCSC Genome Browser custom track)
Alignm length: 561
Alignm identity: 417
Alignm E-value: 0
Alignm gaps (pig, cow): 291, 82

Conread position: 7-559
Cow position: chr3:50128242-50127690 (view UCSC Genome Browser custom track)
Alignm length: 564
Alignm identity: 390
Alignm E-value: 0
Alignm gaps (pig, cow): 265, 27

Conread position: 7-564
Cow position: chr3:32842801-32842255 (view UCSC Genome Browser custom track)
Alignm length: 574
Alignm identity: 390
Alignm E-value: 0
Alignm gaps (pig, cow): 6, 25

Conread position: 8-359
Cow position: chr3:78019128-78019476 (view UCSC Genome Browser custom track)
Alignm length: 355
Alignm identity: 220
Alignm E-value: 2e-22
Alignm gaps (pig, cow): 151, 81

Conread position: 8-402
Cow position: chr3:14634466-14634084 (view UCSC Genome Browser custom track)
Alignm length: 398
Alignm identity: 310
Alignm E-value: 0
Alignm gaps (pig, cow): 352, 84

Conread position: 8-564
Cow position: chr3:64358531-64357975 (view UCSC Genome Browser custom track)
Alignm length: 570
Alignm identity: 438
Alignm E-value: 0
Alignm gaps (pig, cow): 111, 61

Conread position: 9-562
Cow position: chr3:75041529-75040978 (view UCSC Genome Browser custom track)
Alignm length: 564
Alignm identity: 416
Alignm E-value: 0
Alignm gaps (pig, cow): 293, 81

Conread position: 9-564
Cow position: chr3:6685095-6685643 (view UCSC Genome Browser custom track)
Alignm length: 566
Alignm identity: 423
Alignm E-value: 0
Alignm gaps (pig, cow): 292, 86

Conread position: 10-266
Cow position: chr3:19692451-19692205 (view UCSC Genome Browser custom track)
Alignm length: 258
Alignm identity: 181
Alignm E-value: 6e-31
Alignm gaps (pig, cow): 161, 80

Conread position: 10-410
Cow position: chr3:52184599-52184189 (view UCSC Genome Browser custom track)
Alignm length: 418
Alignm identity: 268
Alignm E-value: 5e-29
Alignm gaps (pig, cow): 70, 80

Conread position: 10-539
Cow position: chr3:32623377-32622867 (view UCSC Genome Browser custom track)
Alignm length: 539
Alignm identity: 383
Alignm E-value: 0
Alignm gaps (pig, cow): 13, 83

Conread position: 10-549
Cow position: chr3:7159108-7158554 (view UCSC Genome Browser custom track)
Alignm length: 560
Alignm identity: 418
Alignm E-value: 0
Alignm gaps (pig, cow): 80, 224

Conread position: 10-561
Cow position: chr3:17936427-17935872 (view UCSC Genome Browser custom track)
Alignm length: 562
Alignm identity: 367
Alignm E-value: 0
Alignm gaps (pig, cow): 286, 9

Conread position: 10-563
Cow position: chr3:66119291-66119848 (view UCSC Genome Browser custom track)
Alignm length: 564
Alignm identity: 418
Alignm E-value: 0
Alignm gaps (pig, cow): 288, 85

Conread position: 10-564
Cow position: chr3:42630650-42631207 (view UCSC Genome Browser custom track)
Alignm length: 564
Alignm identity: 372
Alignm E-value: 0
Alignm gaps (pig, cow): 183, 76

Conread position: 11-523
Cow position: chr3:50914940-50915459 (view UCSC Genome Browser custom track)
Alignm length: 524
Alignm identity: 390
Alignm E-value: 0
Alignm gaps (pig, cow): 69, 79

Conread position: 11-539
Cow position: chr3:18463940-18463424 (view UCSC Genome Browser custom track)
Alignm length: 533
Alignm identity: 409
Alignm E-value: 0
Alignm gaps (pig, cow): 287, 65

Conread position: 11-563
Cow position: chr3:48061191-48060639 (view UCSC Genome Browser custom track)
Alignm length: 564
Alignm identity: 417
Alignm E-value: 0
Alignm gaps (pig, cow): 118, 79

Conread position: 11-564
Cow position: chr3:48231346-48230811 (view UCSC Genome Browser custom track)
Alignm length: 564
Alignm identity: 406
Alignm E-value: 0
Alignm gaps (pig, cow): 421, 84

Conread position: 11-564
Cow position: chr3:51940770-51940231 (view UCSC Genome Browser custom track)
Alignm length: 561
Alignm identity: 384
Alignm E-value: 0
Alignm gaps (pig, cow): 291, 79

Conread position: 12-562
Cow position: chr3:45775432-45774906 (view UCSC Genome Browser custom track)
Alignm length: 557
Alignm identity: 366
Alignm E-value: 1.4013e-45
Alignm gaps (pig, cow): 284, 84

Conread position: 15-527
Cow position: chr3:15989396-15988871 (view UCSC Genome Browser custom track)
Alignm length: 531
Alignm identity: 400
Alignm E-value: 0
Alignm gaps (pig, cow): 283, 75

Conread position: 15-557
Cow position: chr3:47082018-47081471 (view UCSC Genome Browser custom track)
Alignm length: 553
Alignm identity: 409
Alignm E-value: 0
Alignm gaps (pig, cow): 283, 75

Conread position: 15-560
Cow position: chr3:60210536-60209991 (view UCSC Genome Browser custom track)
Alignm length: 556
Alignm identity: 371
Alignm E-value: 0
Alignm gaps (pig, cow): 59, 76

Conread position: 18-412
Cow position: chr3:65583971-65583585 (view UCSC Genome Browser custom track)
Alignm length: 399
Alignm identity: 272
Alignm E-value: 0
Alignm gaps (pig, cow): 284, 77

Conread position: 20-567
Cow position: chr3:3806004-3806526 (view UCSC Genome Browser custom track)
Alignm length: 555
Alignm identity: 397
Alignm E-value: 0
Alignm gaps (pig, cow): 282, 75

Conread position: 24-521
Cow position: chr3:18357230-18356736 (view UCSC Genome Browser custom track)
Alignm length: 506
Alignm identity: 360
Alignm E-value: 0
Alignm gaps (pig, cow): 278, 66

Conread position: 25-524
Cow position: chr3:66990453-66990940 (view UCSC Genome Browser custom track)
Alignm length: 507
Alignm identity: 371
Alignm E-value: 0
Alignm gaps (pig, cow): 338, 65

Conread position: 25-563
Cow position: chr3:34396406-34395889 (view UCSC Genome Browser custom track)
Alignm length: 549
Alignm identity: 385
Alignm E-value: 0
Alignm gaps (pig, cow): 64, 44

Conread position: 29-513
Cow position: chr3:53410574-53411051 (view UCSC Genome Browser custom track)
Alignm length: 490
Alignm identity: 338
Alignm E-value: 0
Alignm gaps (pig, cow): 333, 66

Conread position: 29-560
Cow position: chr3:18729478-18728950 (view UCSC Genome Browser custom track)
Alignm length: 541
Alignm identity: 356
Alignm E-value: 0
Alignm gaps (pig, cow): 267, 62

Conread position: 29-563
Cow position: chr3:56097195-56097713 (view UCSC Genome Browser custom track)
Alignm length: 543
Alignm identity: 349
Alignm E-value: 4e-38
Alignm gaps (pig, cow): 271, 16

Conread position: 32-322
Cow position: chr3:60388037-60388321 (view UCSC Genome Browser custom track)
Alignm length: 292
Alignm identity: 189
Alignm E-value: 3e-25
Alignm gaps (pig, cow): 269, 63

Conread position: 32-558
Cow position: chr3:15177969-15178502 (view UCSC Genome Browser custom track)
Alignm length: 542
Alignm identity: 387
Alignm E-value: 0
Alignm gaps (pig, cow): 270, 29

Conread position: 32-563
Cow position: chr3:66638396-66638933 (view UCSC Genome Browser custom track)
Alignm length: 542
Alignm identity: 417
Alignm E-value: 0
Alignm gaps (pig, cow): 267, 63

Conread position: 47-536
Cow position: chr3:19943735-19944216 (view UCSC Genome Browser custom track)
Alignm length: 494
Alignm identity: 368
Alignm E-value: 0
Alignm gaps (pig, cow): 314, 143

Conread position: 57-300
Cow position: chr3:57900898-57901139 (view UCSC Genome Browser custom track)
Alignm length: 244
Alignm identity: 185
Alignm E-value: 0
Alignm gaps (pig, cow): 14, 0

Conread position: 58-277
Cow position: chr3:2909411-2909194 (view UCSC Genome Browser custom track)
Alignm length: 220
Alignm identity: 165
Alignm E-value: 5.99994e-41
Alignm gaps (pig, cow): 37, 0

Conread position: 58-562
Cow position: chr3:45869520-45869026 (view UCSC Genome Browser custom track)
Alignm length: 513
Alignm identity: 370
Alignm E-value: 0
Alignm gaps (pig, cow): 246, 31

Conread position: 58-564
Cow position: chr3:63242039-63241583 (view UCSC Genome Browser custom track)
Alignm length: 510
Alignm identity: 358
Alignm E-value: 0
Alignm gaps (pig, cow): 244, 38

Conread position: 75-564
Cow position: chr3:14754596-14754104 (view UCSC Genome Browser custom track)
Alignm length: 501
Alignm identity: 361
Alignm E-value: 0
Alignm gaps (pig, cow): 223, 20

Conread position: 81-539
Cow position: chr3:7168500-7168962 (view UCSC Genome Browser custom track)
Alignm length: 468
Alignm identity: 352
Alignm E-value: 0
Alignm gaps (pig, cow): 217, 176

Conread position: 83-564
Cow position: chr3:29594911-29595388 (view UCSC Genome Browser custom track)
Alignm length: 492
Alignm identity: 367
Alignm E-value: 0
Alignm gaps (pig, cow): 118, 12

Conread position: 85-482
Cow position: chr3:17775810-17776197 (view UCSC Genome Browser custom track)
Alignm length: 408
Alignm identity: 279
Alignm E-value: 2e-39
Alignm gaps (pig, cow): 211, 10

Conread position: 90-565
Cow position: chr3:5995981-5995502 (view UCSC Genome Browser custom track)
Alignm length: 486
Alignm identity: 361
Alignm E-value: 0
Alignm gaps (pig, cow): 212, 20

Conread position: 96-564
Cow position: chr3:54783261-54783737 (view UCSC Genome Browser custom track)
Alignm length: 480
Alignm identity: 316
Alignm E-value: 0
Alignm gaps (pig, cow): 184, 39

Conread position: 103-549
Cow position: chr3:18859149-18859593 (view UCSC Genome Browser custom track)
Alignm length: 454
Alignm identity: 335
Alignm E-value: 0
Alignm gaps (pig, cow): 195, 23

Conread position: 111-413
Cow position: chr3:13274205-13273900 (view UCSC Genome Browser custom track)
Alignm length: 310
Alignm identity: 206
Alignm E-value: 2e-30
Alignm gaps (pig, cow): 38, 100

Conread position: 115-537
Cow position: chr3:53515358-53515780 (view UCSC Genome Browser custom track)
Alignm length: 433
Alignm identity: 332
Alignm E-value: 0
Alignm gaps (pig, cow): 184, 7

Conread position: 120-516
Cow position: chr3:57501028-57500643 (view UCSC Genome Browser custom track)
Alignm length: 407
Alignm identity: 267
Alignm E-value: 4e-26
Alignm gaps (pig, cow): 241, 74

Conread position: 134-549
Cow position: chr3:66619936-66620351 (view UCSC Genome Browser custom track)
Alignm length: 425
Alignm identity: 311
Alignm E-value: 0
Alignm gaps (pig, cow): 165, 132

Conread position: 140-562
Cow position: chr3:19802423-19802841 (view UCSC Genome Browser custom track)
Alignm length: 428
Alignm identity: 313
Alignm E-value: 0
Alignm gaps (pig, cow): 162, 192

Conread position: 142-508
Cow position: chr3:29327214-29326842 (view UCSC Genome Browser custom track)
Alignm length: 380
Alignm identity: 252
Alignm E-value: 2e-32
Alignm gaps (pig, cow): 54, 14

Conread position: 146-523
Cow position: chr3:83234344-83233976 (view UCSC Genome Browser custom track)
Alignm length: 387
Alignm identity: 258
Alignm E-value: 2e-33
Alignm gaps (pig, cow): 150, 53

Conread position: 176-561
Cow position: chr3:39326521-39326908 (view UCSC Genome Browser custom track)
Alignm length: 396
Alignm identity: 283
Alignm E-value: 0
Alignm gaps (pig, cow): 187, 16

Conread position: 178-567
Cow position: chr3:26822692-26822312 (view UCSC Genome Browser custom track)
Alignm length: 394
Alignm identity: 283
Alignm E-value: 0
Alignm gaps (pig, cow): 124, 89

Conread position: 206-563
Cow position: chr3:23214232-23213869 (view UCSC Genome Browser custom track)
Alignm length: 368
Alignm identity: 282
Alignm E-value: 0
Alignm gaps (pig, cow): 93, 139

Conread position: 219-564
Cow position: chr3:52864631-52864275 (view UCSC Genome Browser custom track)
Alignm length: 361
Alignm identity: 276
Alignm E-value: 0
Alignm gaps (pig, cow): 83, 126

Conread position: 231-549
Cow position: chr3:14439906-14439582 (view UCSC Genome Browser custom track)
Alignm length: 329
Alignm identity: 257
Alignm E-value: 0
Alignm gaps (pig, cow): 71, 48

Conread position: 232-548
Cow position: chr3:34093589-34093271 (view UCSC Genome Browser custom track)
Alignm length: 326
Alignm identity: 229
Alignm E-value: 1.99993e-41
Alignm gaps (pig, cow): 70, 46

Conread position: 232-562
Cow position: chr3:49137685-49137348 (view UCSC Genome Browser custom track)
Alignm length: 340
Alignm identity: 255
Alignm E-value: 0
Alignm gaps (pig, cow): 67, 113

Conread position: 233-399
Cow position: chr3:6189065-6189240 (view UCSC Genome Browser custom track)
Alignm length: 177
Alignm identity: 131
Alignm E-value: 8e-23
Alignm gaps (pig, cow): 65, 118

Conread position: 236-531
Cow position: chr3:13518422-13518133 (view UCSC Genome Browser custom track)
Alignm length: 301
Alignm identity: 236
Alignm E-value: 0
Alignm gaps (pig, cow): 66, 111

Conread position: 243-563
Cow position: chr3:49677653-49677979 (view UCSC Genome Browser custom track)
Alignm length: 330
Alignm identity: 249
Alignm E-value: 0
Alignm gaps (pig, cow): 59, 109

Conread position: 262-538
Cow position: chr3:49545322-49545039 (view UCSC Genome Browser custom track)
Alignm length: 287
Alignm identity: 223
Alignm E-value: 0
Alignm gaps (pig, cow): 40, 83

Conread position: 262-563
Cow position: chr3:45895673-45895365 (view UCSC Genome Browser custom track)
Alignm length: 312
Alignm identity: 235
Alignm E-value: 0
Alignm gaps (pig, cow): 40, 82

Conread position: 262-563
Cow position: chr3:45974382-45974690 (view UCSC Genome Browser custom track)
Alignm length: 312
Alignm identity: 235
Alignm E-value: 0
Alignm gaps (pig, cow): 40, 82

Conread position: 268-565
Cow position: chr3:40157614-40157311 (view UCSC Genome Browser custom track)
Alignm length: 309
Alignm identity: 237
Alignm E-value: 0
Alignm gaps (pig, cow): 36, 84

Conread position: 273-564
Cow position: chr3:19891084-19890794 (view UCSC Genome Browser custom track)
Alignm length: 299
Alignm identity: 205
Alignm E-value: 7e-32
Alignm gaps (pig, cow): 39, 80

Conread position: 276-549
Cow position: chr3:68873848-68873576 (view UCSC Genome Browser custom track)
Alignm length: 284
Alignm identity: 216
Alignm E-value: 8.40779e-45
Alignm gaps (pig, cow): 26, 41

Conread position: 276-567
Cow position: chr3:68700070-68699776 (view UCSC Genome Browser custom track)
Alignm length: 300
Alignm identity: 227
Alignm E-value: 0
Alignm gaps (pig, cow): 26, 76

Conread position: 297-559
Cow position: chr3:77423602-77423863 (view UCSC Genome Browser custom track)
Alignm length: 267
Alignm identity: 205
Alignm E-value: 0
Alignm gaps (pig, cow): 67, 54

Conread position: 316-562
Cow position: chr3:36864419-36864167 (view UCSC Genome Browser custom track)
Alignm length: 256
Alignm identity: 194
Alignm E-value: 2.00386e-43
Alignm gaps (pig, cow): 48, 35

Conread position: 348-549
Cow position: chr3:19938856-19939063 (view UCSC Genome Browser custom track)
Alignm length: 209
Alignm identity: 161
Alignm E-value: 1e-37
Alignm gaps (pig, cow): 15, 134

Conread position: 384-564
Cow position: chr3:63004723-63004541 (view UCSC Genome Browser custom track)
Alignm length: 188
Alignm identity: 136
Alignm E-value: 7e-22
Alignm gaps (pig, cow): 47, 21

Conread position: 386-562
Cow position: chr3:29331265-29331085 (view UCSC Genome Browser custom track)
Alignm length: 183
Alignm identity: 142
Alignm E-value: 7e-32
Alignm gaps (pig, cow): 38, 19

Conread position: 394-561
Cow position: chr3:14632678-14632508 (view UCSC Genome Browser custom track)
Alignm length: 172
Alignm identity: 131
Alignm E-value: 5e-29
Alignm gaps (pig, cow): 22, 112

Conread position: 397-563
Cow position: chr3:7481212-7481039 (view UCSC Genome Browser custom track)
Alignm length: 174
Alignm identity: 128
Alignm E-value: 9e-24
Alignm gaps (pig, cow): 13, 0

Conread position: 432-549
Cow position: chr3:40340051-40339933 (view UCSC Genome Browser custom track)
Alignm length: 119
Alignm identity: 94
Alignm E-value: 2e-22
Alignm gaps (pig, cow): 39, 0

Show alignments to all cow chromosomes.