Cow genome map


           Conread name:
           Utr1-UTR010045E09
        

               Conread position:
               4-508
               

               Cow position:
               
               

               Alignm length:
               515
               

               Alignm identity:
               393
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               295, 86
               

               Conread position:
               5-272
               

               Cow position:
               
               

               Alignm length:
               268
               

               Alignm identity:
               203
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               85, 0
               

               Conread position:
               5-340
               

               Cow position:
               
               

               Alignm length:
               342
               

               Alignm identity:
               240
               

               Alignm E-value:
               1.99965e-42
               

               Alignm gaps (pig, cow):
               52, 96
               

               Conread position:
               5-468
               

               Cow position:
               
               

               Alignm length:
               469
               

               Alignm identity:
               312
               

               Alignm E-value:
               2.00386e-43
               

               Alignm gaps (pig, cow):
               355, 83
               

               Conread position:
               5-549
               

               Cow position:
               
               

               Alignm length:
               555
               

               Alignm identity:
               411
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               297, 14
               

               Conread position:
               5-567
               

               Cow position:
               
               

               Alignm length:
               574
               

               Alignm identity:
               434
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               272, 85
               

               Conread position:
               6-110
               

               Cow position:
               
               

               Alignm length:
               106
               

               Alignm identity:
               87
               

               Alignm E-value:
               5e-21
               

               Alignm gaps (pig, cow):
               94, 83
               

               Conread position:
               6-137
               

               Cow position:
               
               

               Alignm length:
               132
               

               Alignm identity:
               104
               

               Alignm E-value:
               9e-26
               

               Alignm gaps (pig, cow):
               83, 0
               

               Conread position:
               6-221
               

               Cow position:
               
               

               Alignm length:
               216
               

               Alignm identity:
               155
               

               Alignm E-value:
               2e-35
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               6-273
               

               Cow position:
               
               

               Alignm length:
               271
               

               Alignm identity:
               219
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               9, 92
               

               Conread position:
               6-339
               

               Cow position:
               
               

               Alignm length:
               335
               

               Alignm identity:
               252
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               255, 84
               

               Conread position:
               6-380
               

               Cow position:
               
               

               Alignm length:
               379
               

               Alignm identity:
               285
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               293, 78
               

               Conread position:
               6-424
               

               Cow position:
               
               

               Alignm length:
               423
               

               Alignm identity:
               333
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               25, 85
               

               Conread position:
               6-469
               

               Cow position:
               
               

               Alignm length:
               473
               

               Alignm identity:
               365
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               296, 84
               

               Conread position:
               6-516
               

               Cow position:
               
               

               Alignm length:
               523
               

               Alignm identity:
               380
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               200, 86
               

               Conread position:
               6-517
               

               Cow position:
               
               

               Alignm length:
               525
               

               Alignm identity:
               370
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               290, 23
               

               Conread position:
               6-532
               

               Cow position:
               
               

               Alignm length:
               537
               

               Alignm identity:
               359
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               292, 84
               

               Conread position:
               6-536
               

               Cow position:
               
               

               Alignm length:
               540
               

               Alignm identity:
               409
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               355, 84
               

               Conread position:
               6-548
               

               Cow position:
               
               

               Alignm length:
               557
               

               Alignm identity:
               421
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               55, 34
               

               Conread position:
               6-549
               

               Cow position:
               
               

               Alignm length:
               554
               

               Alignm identity:
               411
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               292, 84
               

               Conread position:
               6-549
               

               Cow position:
               
               

               Alignm length:
               553
               

               Alignm identity:
               409
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               296, 84
               

               Conread position:
               6-549
               

               Cow position:
               
               

               Alignm length:
               567
               

               Alignm identity:
               417
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               295, 84
               

               Conread position:
               6-549
               

               Cow position:
               
               

               Alignm length:
               552
               

               Alignm identity:
               407
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               358, 84
               

               Conread position:
               6-549
               

               Cow position:
               
               

               Alignm length:
               554
               

               Alignm identity:
               413
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               295, 84
               

               Conread position:
               6-549
               

               Cow position:
               
               

               Alignm length:
               554
               

               Alignm identity:
               422
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               293, 13
               

               Conread position:
               6-549
               

               Cow position:
               
               

               Alignm length:
               553
               

               Alignm identity:
               425
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               295, 84
               

               Conread position:
               6-562
               

               Cow position:
               
               

               Alignm length:
               566
               

               Alignm identity:
               430
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               293, 84
               

               Conread position:
               6-562
               

               Cow position:
               
               

               Alignm length:
               565
               

               Alignm identity:
               421
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               296, 89
               

               Conread position:
               6-562
               

               Cow position:
               
               

               Alignm length:
               567
               

               Alignm identity:
               426
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               292, 84
               

               Conread position:
               6-563
               

               Cow position:
               
               

               Alignm length:
               565
               

               Alignm identity:
               413
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               366, 83
               

               Conread position:
               6-563
               

               Cow position:
               
               

               Alignm length:
               568
               

               Alignm identity:
               420
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               293, 39
               

               Conread position:
               6-563
               

               Cow position:
               
               

               Alignm length:
               568
               

               Alignm identity:
               418
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               290, 84
               

               Conread position:
               6-563
               

               Cow position:
               
               

               Alignm length:
               568
               

               Alignm identity:
               437
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               296, 84
               

               Conread position:
               6-563
               

               Cow position:
               
               

               Alignm length:
               566
               

               Alignm identity:
               423
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               355, 84
               

               Conread position:
               6-563
               

               Cow position:
               
               

               Alignm length:
               570
               

               Alignm identity:
               425
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               105, 83
               

               Conread position:
               6-563
               

               Cow position:
               
               

               Alignm length:
               565
               

               Alignm identity:
               426
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               293, 84
               

               Conread position:
               6-563
               

               Cow position:
               
               

               Alignm length:
               569
               

               Alignm identity:
               422
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               150, 83
               

               Conread position:
               6-564
               

               Cow position:
               
               

               Alignm length:
               570
               

               Alignm identity:
               430
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               292, 84
               

               Conread position:
               6-564
               

               Cow position:
               
               

               Alignm length:
               571
               

               Alignm identity:
               428
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               31, 85
               

               Conread position:
               6-564
               

               Cow position:
               
               

               Alignm length:
               568
               

               Alignm identity:
               417
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               296, 36
               

               Conread position:
               6-566
               

               Cow position:
               
               

               Alignm length:
               571
               

               Alignm identity:
               431
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               293, 84
               

               Conread position:
               6-567
               

               Cow position:
               
               

               Alignm length:
               572
               

               Alignm identity:
               424
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               296, 84
               

               Conread position:
               6-567
               

               Cow position:
               
               

               Alignm length:
               570
               

               Alignm identity:
               451
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               287, 13
               

               Conread position:
               6-567
               

               Cow position:
               
               

               Alignm length:
               571
               

               Alignm identity:
               431
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               104, 53
               

               Conread position:
               7-563
               

               Cow position:
               
               

               Alignm length:
               567
               

               Alignm identity:
               432
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               295, 82
               

               Conread position:
               8-549
               

               Cow position:
               
               

               Alignm length:
               553
               

               Alignm identity:
               419
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               31, 45
               

               Conread position:
               8-562
               

               Cow position:
               
               

               Alignm length:
               565
               

               Alignm identity:
               430
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               158, 82
               

               Conread position:
               10-227
               

               Cow position:
               
               

               Alignm length:
               219
               

               Alignm identity:
               151
               

               Alignm E-value:
               7e-24
               

               Alignm gaps (pig, cow):
               68, 80
               

               Conread position:
               10-549
               

               Cow position:
               
               

               Alignm length:
               551
               

               Alignm identity:
               412
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               131, 79
               

               Conread position:
               10-557
               

               Cow position:
               
               

               Alignm length:
               558
               

               Alignm identity:
               411
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               292, 13
               

               Conread position:
               10-557
               

               Cow position:
               
               

               Alignm length:
               558
               

               Alignm identity:
               417
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               288, 80
               

               Conread position:
               10-558
               

               Cow position:
               
               

               Alignm length:
               556
               

               Alignm identity:
               403
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               13, 48
               

               Conread position:
               10-559
               

               Cow position:
               
               

               Alignm length:
               563
               

               Alignm identity:
               364
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               165, 54
               

               Conread position:
               10-560
               

               Cow position:
               
               

               Alignm length:
               562
               

               Alignm identity:
               368
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               351, 85
               

               Conread position:
               11-250
               

               Cow position:
               
               

               Alignm length:
               240
               

               Alignm identity:
               178
               

               Alignm E-value:
               9.99995e-41
               

               Alignm gaps (pig, cow):
               75, 0
               

               Conread position:
               15-557
               

               Cow position:
               
               

               Alignm length:
               552
               

               Alignm identity:
               405
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               287, 75
               

               Conread position:
               15-562
               

               Cow position:
               
               

               Alignm length:
               554
               

               Alignm identity:
               372
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               110, 54
               

               Conread position:
               18-561
               

               Cow position:
               
               

               Alignm length:
               553
               

               Alignm identity:
               390
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               342, 53
               

               Conread position:
               19-343
               

               Cow position:
               
               

               Alignm length:
               328
               

               Alignm identity:
               232
               

               Alignm E-value:
               1.4013e-45
               

               Alignm gaps (pig, cow):
               199, 72
               

               Conread position:
               22-406
               

               Cow position:
               
               

               Alignm length:
               402
               

               Alignm identity:
               294
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               209, 68
               

               Conread position:
               23-482
               

               Cow position:
               
               

               Alignm length:
               468
               

               Alignm identity:
               320
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               27, 73
               

               Conread position:
               34-560
               

               Cow position:
               
               

               Alignm length:
               539
               

               Alignm identity:
               350
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               34, 62
               

               Conread position:
               46-243
               

               Cow position:
               
               

               Alignm length:
               199
               

               Alignm identity:
               139
               

               Alignm E-value:
               2e-24
               

               Alignm gaps (pig, cow):
               49, 56
               

               Conread position:
               47-278
               

               Cow position:
               
               

               Alignm length:
               233
               

               Alignm identity:
               185
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               142, 48
               

               Conread position:
               58-561
               

               Cow position:
               
               

               Alignm length:
               513
               

               Alignm identity:
               380
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               244, 32
               

               Conread position:
               60-563
               

               Cow position:
               
               

               Alignm length:
               516
               

               Alignm identity:
               379
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               35, 287
               

               Conread position:
               83-505
               

               Cow position:
               
               

               Alignm length:
               431
               

               Alignm identity:
               281
               

               Alignm E-value:
               9.99995e-41
               

               Alignm gaps (pig, cow):
               192, 93
               

               Conread position:
               84-545
               

               Cow position:
               
               

               Alignm length:
               471
               

               Alignm identity:
               350
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               215, 6
               

               Conread position:
               86-563
               

               Cow position:
               
               

               Alignm length:
               488
               

               Alignm identity:
               355
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               216, 226
               

               Conread position:
               94-511
               

               Cow position:
               
               

               Alignm length:
               425
               

               Alignm identity:
               267
               

               Alignm E-value:
               5e-32
               

               Alignm gaps (pig, cow):
               268, 200
               

               Conread position:
               99-505
               

               Cow position:
               
               

               Alignm length:
               417
               

               Alignm identity:
               269
               

               Alignm E-value:
               2e-32
               

               Alignm gaps (pig, cow):
               203, 168
               

               Conread position:
               99-563
               

               Cow position:
               
               

               Alignm length:
               474
               

               Alignm identity:
               359
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               262, 71
               

               Conread position:
               102-557
               

               Cow position:
               
               

               Alignm length:
               462
               

               Alignm identity:
               341
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               104, 244
               

               Conread position:
               116-498
               

               Cow position:
               
               

               Alignm length:
               388
               

               Alignm identity:
               266
               

               Alignm E-value:
               4e-28
               

               Alignm gaps (pig, cow):
               245, 103
               

               Conread position:
               149-563
               

               Cow position:
               
               

               Alignm length:
               423
               

               Alignm identity:
               315
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               153, 26
               

               Conread position:
               160-545
               

               Cow position:
               
               

               Alignm length:
               397
               

               Alignm identity:
               302
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               44, 184
               

               Conread position:
               191-456
               

               Cow position:
               
               

               Alignm length:
               275
               

               Alignm identity:
               204
               

               Alignm E-value:
               1e-37
               

               Alignm gaps (pig, cow):
               21, 15
               

               Conread position:
               231-424
               

               Cow position:
               
               

               Alignm length:
               198
               

               Alignm identity:
               146
               

               Alignm E-value:
               7e-24
               

               Alignm gaps (pig, cow):
               71, 45
               

               Conread position:
               235-562
               

               Cow position:
               
               

               Alignm length:
               338
               

               Alignm identity:
               254
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               64, 110
               

               Conread position:
               243-568
               

               Cow position:
               
               

               Alignm length:
               330
               

               Alignm identity:
               215
               

               Alignm E-value:
               2e-23
               

               Alignm gaps (pig, cow):
               59, 36
               

               Conread position:
               244-563
               

               Cow position:
               
               

               Alignm length:
               325
               

               Alignm identity:
               252
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               60, 108
               

               Conread position:
               270-567
               

               Cow position:
               
               

               Alignm length:
               308
               

               Alignm identity:
               237
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               32, 82
               

               Conread position:
               320-469
               

               Cow position:
               
               

               Alignm length:
               159
               

               Alignm identity:
               121
               

               Alignm E-value:
               6e-22
               

               Alignm gaps (pig, cow):
               43, 31
               

               Conread position:
               326-562
               

               Cow position:
               
               

               Alignm length:
               246
               

               Alignm identity:
               181
               

               Alignm E-value:
               9e-37
               

               Alignm gaps (pig, cow):
               38, 25
               

               Conread position:
               330-563
               

               Cow position:
               
               

               Alignm length:
               242
               

               Alignm identity:
               169
               

               Alignm E-value:
               1e-26
               

               Alignm gaps (pig, cow):
               33, 21
               

               Conread position:
               372-549
               

               Cow position:
               
               

               Alignm length:
               184
               

               Alignm identity:
               142
               

               Alignm E-value:
               2e-31
               

               Alignm gaps (pig, cow):
               51, 33
               

               Conread position:
               377-563
               

               Cow position:
               
               

               Alignm length:
               189
               

               Alignm identity:
               140
               

               Alignm E-value:
               5e-31
               

               Alignm gaps (pig, cow):
               92, 37
               

               Conread position:
               384-564
               

               Cow position:
               
               

               Alignm length:
               183
               

               Alignm identity:
               135
               

               Alignm E-value:
               4e-28
               

               Alignm gaps (pig, cow):
               86, 21
               

               Conread position:
               406-549
               

               Cow position:
               
               

               Alignm length:
               151
               

               Alignm identity:
               115
               

               Alignm E-value:
               2e-22
               

               Alignm gaps (pig, cow):
               18, 0
               

               Conread position:
               406-549
               

               Cow position:
               
               

               Alignm length:
               151
               

               Alignm identity:
               115
               

               Alignm E-value:
               2e-22
               

               Alignm gaps (pig, cow):
               18, 0
               

               Conread position:
               431-549
               

               Cow position:
               
               

               Alignm length:
               119
               

               Alignm identity:
               94
               

               Alignm E-value:
               2e-23
               

               Alignm gaps (pig, cow):
               0, 0
               
Show alignments to all cow chromosomes.