Cow genome map
| Conread name: | Utr1-UTR010045E09 |
| Conread position: | 1-427 |
| Cow position: | chr5:25207216-25206790 (view UCSC Genome Browser custom track) |
| Alignm length: | 435 |
| Alignm identity: | 331 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 28, 93 |
| Conread position: | 4-428 |
| Cow position: | chr5:6188101-6188514 (view UCSC Genome Browser custom track) |
| Alignm length: | 429 |
| Alignm identity: | 294 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 6, 16 |
| Conread position: | 4-538 |
| Cow position: | chr5:26507970-26508503 (view UCSC Genome Browser custom track) |
| Alignm length: | 547 |
| Alignm identity: | 347 |
| Alignm E-value: | 2e-40 |
| Alignm gaps (pig, cow): | 33, 98 |
| Conread position: | 4-563 |
| Cow position: | chr5:39165269-39164708 (view UCSC Genome Browser custom track) |
| Alignm length: | 566 |
| Alignm identity: | 426 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 298, 86 |
| Conread position: | 5-333 |
| Cow position: | chr5:27569681-27570011 (view UCSC Genome Browser custom track) |
| Alignm length: | 334 |
| Alignm identity: | 252 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 185, 26 |
| Conread position: | 5-360 |
| Cow position: | chr5:23227790-23228138 (view UCSC Genome Browser custom track) |
| Alignm length: | 360 |
| Alignm identity: | 254 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 236, 27 |
| Conread position: | 5-517 |
| Cow position: | chr5:6158669-6158152 (view UCSC Genome Browser custom track) |
| Alignm length: | 525 |
| Alignm identity: | 388 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 6, 86 |
| Conread position: | 5-549 |
| Cow position: | chr5:2530799-2531349 (view UCSC Genome Browser custom track) |
| Alignm length: | 555 |
| Alignm identity: | 428 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 293, 85 |
| Conread position: | 5-563 |
| Cow position: | chr5:9686885-9686335 (view UCSC Genome Browser custom track) |
| Alignm length: | 569 |
| Alignm identity: | 419 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 318, 90 |
| Conread position: | 5-564 |
| Cow position: | chr5:49593930-49593362 (view UCSC Genome Browser custom track) |
| Alignm length: | 571 |
| Alignm identity: | 446 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 87, 213 |
| Conread position: | 5-564 |
| Cow position: | chr5:56858167-56857628 (view UCSC Genome Browser custom track) |
| Alignm length: | 568 |
| Alignm identity: | 374 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 143, 30 |
| Conread position: | 5-565 |
| Cow position: | chr5:26054296-26054842 (view UCSC Genome Browser custom track) |
| Alignm length: | 568 |
| Alignm identity: | 363 |
| Alignm E-value: | 7.00649e-44 |
| Alignm gaps (pig, cow): | 297, 86 |
| Conread position: | 5-567 |
| Cow position: | chr5:48468746-48468183 (view UCSC Genome Browser custom track) |
| Alignm length: | 572 |
| Alignm identity: | 432 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 357, 30 |
| Conread position: | 5-568 |
| Cow position: | chr5:14346845-14346283 (view UCSC Genome Browser custom track) |
| Alignm length: | 576 |
| Alignm identity: | 368 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 117, 86 |
| Conread position: | 6-136 |
| Cow position: | chr5:23960578-23960451 (view UCSC Genome Browser custom track) |
| Alignm length: | 131 |
| Alignm identity: | 102 |
| Alignm E-value: | 7e-23 |
| Alignm gaps (pig, cow): | 83, 0 |
| Conread position: | 6-168 |
| Cow position: | chr5:6519424-6519577 (view UCSC Genome Browser custom track) |
| Alignm length: | 163 |
| Alignm identity: | 132 |
| Alignm E-value: | 7e-33 |
| Alignm gaps (pig, cow): | 12, 0 |
| Conread position: | 6-178 |
| Cow position: | chr5:12185190-12185361 (view UCSC Genome Browser custom track) |
| Alignm length: | 173 |
| Alignm identity: | 134 |
| Alignm E-value: | 8e-35 |
| Alignm gaps (pig, cow): | 83, 0 |
| Conread position: | 6-183 |
| Cow position: | chr5:37755609-37755433 (view UCSC Genome Browser custom track) |
| Alignm length: | 178 |
| Alignm identity: | 132 |
| Alignm E-value: | 2e-30 |
| Alignm gaps (pig, cow): | 83, 0 |
| Conread position: | 6-248 |
| Cow position: | chr5:35299593-35299834 (view UCSC Genome Browser custom track) |
| Alignm length: | 243 |
| Alignm identity: | 184 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 84, 0 |
| Conread position: | 6-249 |
| Cow position: | chr5:23716415-23716177 (view UCSC Genome Browser custom track) |
| Alignm length: | 247 |
| Alignm identity: | 187 |
| Alignm E-value: | 1.99965e-42 |
| Alignm gaps (pig, cow): | 194, 42 |
| Conread position: | 6-264 |
| Cow position: | chr5:12644341-12644100 (view UCSC Genome Browser custom track) |
| Alignm length: | 260 |
| Alignm identity: | 193 |
| Alignm E-value: | 1e-37 |
| Alignm gaps (pig, cow): | 25, 91 |
| Conread position: | 6-266 |
| Cow position: | chr5:12681978-12681720 (view UCSC Genome Browser custom track) |
| Alignm length: | 270 |
| Alignm identity: | 198 |
| Alignm E-value: | 1e-37 |
| Alignm gaps (pig, cow): | 202, 29 |
| Conread position: | 6-317 |
| Cow position: | chr5:51771815-51771508 (view UCSC Genome Browser custom track) |
| Alignm length: | 313 |
| Alignm identity: | 212 |
| Alignm E-value: | 1e-37 |
| Alignm gaps (pig, cow): | 197, 85 |
| Conread position: | 6-323 |
| Cow position: | chr5:25846782-25846455 (view UCSC Genome Browser custom track) |
| Alignm length: | 333 |
| Alignm identity: | 216 |
| Alignm E-value: | 2e-21 |
| Alignm gaps (pig, cow): | 89, 17 |
| Conread position: | 6-361 |
| Cow position: | chr5:10844345-10843991 (view UCSC Genome Browser custom track) |
| Alignm length: | 357 |
| Alignm identity: | 264 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 296, 84 |
| Conread position: | 6-397 |
| Cow position: | chr5:53714786-53715176 (view UCSC Genome Browser custom track) |
| Alignm length: | 396 |
| Alignm identity: | 297 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 295, 84 |
| Conread position: | 6-423 |
| Cow position: | chr5:55097167-55096766 (view UCSC Genome Browser custom track) |
| Alignm length: | 424 |
| Alignm identity: | 281 |
| Alignm E-value: | 3e-35 |
| Alignm gaps (pig, cow): | 97, 62 |
| Conread position: | 6-495 |
| Cow position: | chr5:18665491-18665986 (view UCSC Genome Browser custom track) |
| Alignm length: | 501 |
| Alignm identity: | 364 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 292, 84 |
| Conread position: | 6-520 |
| Cow position: | chr5:61273638-61273138 (view UCSC Genome Browser custom track) |
| Alignm length: | 522 |
| Alignm identity: | 389 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 289, 89 |
| Conread position: | 6-521 |
| Cow position: | chr5:3504717-3504200 (view UCSC Genome Browser custom track) |
| Alignm length: | 526 |
| Alignm identity: | 395 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 293, 83 |
| Conread position: | 6-531 |
| Cow position: | chr5:1342266-1341737 (view UCSC Genome Browser custom track) |
| Alignm length: | 535 |
| Alignm identity: | 400 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 89, 340 |
| Conread position: | 6-533 |
| Cow position: | chr5:31102067-31101549 (view UCSC Genome Browser custom track) |
| Alignm length: | 535 |
| Alignm identity: | 410 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 141, 84 |
| Conread position: | 6-537 |
| Cow position: | chr5:48809184-48808649 (view UCSC Genome Browser custom track) |
| Alignm length: | 543 |
| Alignm identity: | 407 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 26, 85 |
| Conread position: | 6-538 |
| Cow position: | chr5:26090296-26089765 (view UCSC Genome Browser custom track) |
| Alignm length: | 544 |
| Alignm identity: | 395 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 202, 89 |
| Conread position: | 6-545 |
| Cow position: | chr5:64782487-64781944 (view UCSC Genome Browser custom track) |
| Alignm length: | 550 |
| Alignm identity: | 432 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 287, 84 |
| Conread position: | 6-548 |
| Cow position: | chr5:2430602-2430055 (view UCSC Genome Browser custom track) |
| Alignm length: | 553 |
| Alignm identity: | 427 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 293, 50 |
| Conread position: | 6-549 |
| Cow position: | chr5:4019669-4019120 (view UCSC Genome Browser custom track) |
| Alignm length: | 554 |
| Alignm identity: | 412 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 296, 84 |
| Conread position: | 6-549 |
| Cow position: | chr5:10918327-10918873 (view UCSC Genome Browser custom track) |
| Alignm length: | 554 |
| Alignm identity: | 420 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 296, 84 |
| Conread position: | 6-549 |
| Cow position: | chr5:14379692-14380240 (view UCSC Genome Browser custom track) |
| Alignm length: | 554 |
| Alignm identity: | 418 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 291, 84 |
| Conread position: | 6-549 |
| Cow position: | chr5:29042041-29042589 (view UCSC Genome Browser custom track) |
| Alignm length: | 554 |
| Alignm identity: | 426 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 292, 84 |
| Conread position: | 6-549 |
| Cow position: | chr5:31706104-31706652 (view UCSC Genome Browser custom track) |
| Alignm length: | 555 |
| Alignm identity: | 407 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 202, 83 |
| Conread position: | 6-549 |
| Cow position: | chr5:32772011-32772560 (view UCSC Genome Browser custom track) |
| Alignm length: | 554 |
| Alignm identity: | 421 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 292, 84 |
| Conread position: | 6-549 |
| Cow position: | chr5:45182572-45182025 (view UCSC Genome Browser custom track) |
| Alignm length: | 559 |
| Alignm identity: | 419 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 292, 84 |
| Conread position: | 6-549 |
| Cow position: | chr5:46663531-46664081 (view UCSC Genome Browser custom track) |
| Alignm length: | 558 |
| Alignm identity: | 415 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 278, 84 |
| Conread position: | 6-549 |
| Cow position: | chr5:58195532-58196080 (view UCSC Genome Browser custom track) |
| Alignm length: | 554 |
| Alignm identity: | 419 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 292, 84 |
| Conread position: | 6-556 |
| Cow position: | chr5:27909738-27909186 (view UCSC Genome Browser custom track) |
| Alignm length: | 562 |
| Alignm identity: | 419 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 296, 84 |
| Conread position: | 6-557 |
| Cow position: | chr5:10776723-10776178 (view UCSC Genome Browser custom track) |
| Alignm length: | 562 |
| Alignm identity: | 408 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 296, 84 |
| Conread position: | 6-557 |
| Cow position: | chr5:46775615-46776166 (view UCSC Genome Browser custom track) |
| Alignm length: | 566 |
| Alignm identity: | 414 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 84, 185 |
| Conread position: | 6-560 |
| Cow position: | chr5:28022697-28023242 (view UCSC Genome Browser custom track) |
| Alignm length: | 564 |
| Alignm identity: | 355 |
| Alignm E-value: | 4e-39 |
| Alignm gaps (pig, cow): | 293, 62 |
| Conread position: | 6-561 |
| Cow position: | chr5:41530040-41529504 (view UCSC Genome Browser custom track) |
| Alignm length: | 564 |
| Alignm identity: | 411 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 25, 91 |
| Conread position: | 6-562 |
| Cow position: | chr5:26079689-26079127 (view UCSC Genome Browser custom track) |
| Alignm length: | 567 |
| Alignm identity: | 430 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 295, 84 |
| Conread position: | 6-562 |
| Cow position: | chr5:30578852-30579413 (view UCSC Genome Browser custom track) |
| Alignm length: | 567 |
| Alignm identity: | 422 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 293, 84 |
| Conread position: | 6-562 |
| Cow position: | chr5:44459012-44459574 (view UCSC Genome Browser custom track) |
| Alignm length: | 567 |
| Alignm identity: | 427 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 292, 84 |
| Conread position: | 6-562 |
| Cow position: | chr5:46630895-46630350 (view UCSC Genome Browser custom track) |
| Alignm length: | 566 |
| Alignm identity: | 402 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 213, 89 |
| Conread position: | 6-562 |
| Cow position: | chr5:59481785-59482344 (view UCSC Genome Browser custom track) |
| Alignm length: | 566 |
| Alignm identity: | 418 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 355, 39 |
| Conread position: | 6-563 |
| Cow position: | chr5:416190-415630 (view UCSC Genome Browser custom track) |
| Alignm length: | 568 |
| Alignm identity: | 412 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 296, 84 |
| Conread position: | 6-563 |
| Cow position: | chr5:2913980-2914540 (view UCSC Genome Browser custom track) |
| Alignm length: | 568 |
| Alignm identity: | 422 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 293, 84 |
| Conread position: | 6-563 |
| Cow position: | chr5:3785341-3785877 (view UCSC Genome Browser custom track) |
| Alignm length: | 567 |
| Alignm identity: | 409 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 292, 84 |
| Conread position: | 6-563 |
| Cow position: | chr5:4068520-4069080 (view UCSC Genome Browser custom track) |
| Alignm length: | 568 |
| Alignm identity: | 430 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 296, 84 |
| Conread position: | 6-563 |
| Cow position: | chr5:4384759-4385338 (view UCSC Genome Browser custom track) |
| Alignm length: | 590 |
| Alignm identity: | 411 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 230, 84 |
| Conread position: | 6-563 |
| Cow position: | chr5:24098177-24098741 (view UCSC Genome Browser custom track) |
| Alignm length: | 570 |
| Alignm identity: | 434 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 25, 83 |
| Conread position: | 6-563 |
| Cow position: | chr5:28006749-28007282 (view UCSC Genome Browser custom track) |
| Alignm length: | 561 |
| Alignm identity: | 409 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 296, 51 |
| Conread position: | 6-563 |
| Cow position: | chr5:32945410-32945966 (view UCSC Genome Browser custom track) |
| Alignm length: | 568 |
| Alignm identity: | 449 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 298, 84 |
| Conread position: | 6-563 |
| Cow position: | chr5:34202477-34203027 (view UCSC Genome Browser custom track) |
| Alignm length: | 564 |
| Alignm identity: | 423 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 37, 68 |
| Conread position: | 6-563 |
| Cow position: | chr5:34696114-34696695 (view UCSC Genome Browser custom track) |
| Alignm length: | 587 |
| Alignm identity: | 428 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 108, 34 |
| Conread position: | 6-563 |
| Cow position: | chr5:45699810-45700358 (view UCSC Genome Browser custom track) |
| Alignm length: | 568 |
| Alignm identity: | 418 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 89, 143 |
| Conread position: | 6-563 |
| Cow position: | chr5:49119748-49119189 (view UCSC Genome Browser custom track) |
| Alignm length: | 568 |
| Alignm identity: | 417 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 296, 84 |
| Conread position: | 6-563 |
| Cow position: | chr5:54793088-54792543 (view UCSC Genome Browser custom track) |
| Alignm length: | 574 |
| Alignm identity: | 410 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 210, 84 |
| Conread position: | 6-563 |
| Cow position: | chr5:55627534-55628078 (view UCSC Genome Browser custom track) |
| Alignm length: | 568 |
| Alignm identity: | 421 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 190, 84 |
| Conread position: | 6-563 |
| Cow position: | chr5:57483017-57482454 (view UCSC Genome Browser custom track) |
| Alignm length: | 568 |
| Alignm identity: | 426 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 296, 84 |
| Conread position: | 6-564 |
| Cow position: | chr5:3964000-3964549 (view UCSC Genome Browser custom track) |
| Alignm length: | 569 |
| Alignm identity: | 409 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 355, 90 |
| Conread position: | 6-566 |
| Cow position: | chr5:7273396-7273922 (view UCSC Genome Browser custom track) |
| Alignm length: | 566 |
| Alignm identity: | 412 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 293, 26 |
| Conread position: | 6-566 |
| Cow position: | chr5:27652459-27651887 (view UCSC Genome Browser custom track) |
| Alignm length: | 586 |
| Alignm identity: | 429 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 89, 31 |
| Conread position: | 6-566 |
| Cow position: | chr5:46739055-46738491 (view UCSC Genome Browser custom track) |
| Alignm length: | 570 |
| Alignm identity: | 423 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 357, 84 |
| Conread position: | 6-567 |
| Cow position: | chr5:24576442-24577011 (view UCSC Genome Browser custom track) |
| Alignm length: | 574 |
| Alignm identity: | 424 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 56, 85 |
| Conread position: | 6-567 |
| Cow position: | chr5:26769348-26769901 (view UCSC Genome Browser custom track) |
| Alignm length: | 569 |
| Alignm identity: | 413 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 290, 16 |
| Conread position: | 6-567 |
| Cow position: | chr5:37731875-37732444 (view UCSC Genome Browser custom track) |
| Alignm length: | 574 |
| Alignm identity: | 441 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 293, 84 |
| Conread position: | 7-184 |
| Cow position: | chr5:52804865-52805041 (view UCSC Genome Browser custom track) |
| Alignm length: | 179 |
| Alignm identity: | 138 |
| Alignm E-value: | 2e-34 |
| Alignm gaps (pig, cow): | 85, 152 |
| Conread position: | 7-548 |
| Cow position: | chr5:54932687-54932141 (view UCSC Genome Browser custom track) |
| Alignm length: | 552 |
| Alignm identity: | 421 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 295, 83 |
| Conread position: | 8-192 |
| Cow position: | chr5:59282294-59282477 (view UCSC Genome Browser custom track) |
| Alignm length: | 185 |
| Alignm identity: | 144 |
| Alignm E-value: | 1e-38 |
| Alignm gaps (pig, cow): | 81, 0 |
| Conread position: | 8-563 |
| Cow position: | chr5:41551393-41550834 (view UCSC Genome Browser custom track) |
| Alignm length: | 565 |
| Alignm identity: | 418 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 287, 83 |
| Conread position: | 9-539 |
| Cow position: | chr5:46659257-46659778 (view UCSC Genome Browser custom track) |
| Alignm length: | 546 |
| Alignm identity: | 389 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 125, 79 |
| Conread position: | 10-170 |
| Cow position: | chr5:57976885-57977047 (view UCSC Genome Browser custom track) |
| Alignm length: | 164 |
| Alignm identity: | 129 |
| Alignm E-value: | 2e-31 |
| Alignm gaps (pig, cow): | 82, 9 |
| Conread position: | 10-272 |
| Cow position: | chr5:76124017-76123757 (view UCSC Genome Browser custom track) |
| Alignm length: | 263 |
| Alignm identity: | 169 |
| Alignm E-value: | 3e-24 |
| Alignm gaps (pig, cow): | 85, 0 |
| Conread position: | 10-391 |
| Cow position: | chr5:46005850-46005460 (view UCSC Genome Browser custom track) |
| Alignm length: | 393 |
| Alignm identity: | 295 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 289, 80 |
| Conread position: | 10-538 |
| Cow position: | chr5:24329834-24330341 (view UCSC Genome Browser custom track) |
| Alignm length: | 539 |
| Alignm identity: | 407 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 351, 13 |
| Conread position: | 10-549 |
| Cow position: | chr5:59060158-59060696 (view UCSC Genome Browser custom track) |
| Alignm length: | 549 |
| Alignm identity: | 402 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 288, 80 |
| Conread position: | 10-560 |
| Cow position: | chr5:41359199-41358657 (view UCSC Genome Browser custom track) |
| Alignm length: | 561 |
| Alignm identity: | 358 |
| Alignm E-value: | 1.96182e-44 |
| Alignm gaps (pig, cow): | 108, 85 |
| Conread position: | 10-562 |
| Cow position: | chr5:46644243-46644778 (view UCSC Genome Browser custom track) |
| Alignm length: | 563 |
| Alignm identity: | 399 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 292, 88 |
| Conread position: | 10-563 |
| Cow position: | chr5:49181815-49182361 (view UCSC Genome Browser custom track) |
| Alignm length: | 567 |
| Alignm identity: | 421 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 159, 85 |
| Conread position: | 11-275 |
| Cow position: | chr5:30088184-30087924 (view UCSC Genome Browser custom track) |
| Alignm length: | 265 |
| Alignm identity: | 181 |
| Alignm E-value: | 2e-33 |
| Alignm gaps (pig, cow): | 84, 0 |
| Conread position: | 11-531 |
| Cow position: | chr5:61020305-61019789 (view UCSC Genome Browser custom track) |
| Alignm length: | 534 |
| Alignm identity: | 355 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 26, 13 |
| Conread position: | 11-550 |
| Cow position: | chr5:32733710-32733173 (view UCSC Genome Browser custom track) |
| Alignm length: | 548 |
| Alignm identity: | 416 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 287, 84 |
| Conread position: | 12-265 |
| Cow position: | chr5:28570234-28570482 (view UCSC Genome Browser custom track) |
| Alignm length: | 254 |
| Alignm identity: | 165 |
| Alignm E-value: | 2e-22 |
| Alignm gaps (pig, cow): | 76, 0 |
| Conread position: | 12-300 |
| Cow position: | chr5:27488558-27488840 (view UCSC Genome Browser custom track) |
| Alignm length: | 289 |
| Alignm identity: | 196 |
| Alignm E-value: | 3e-35 |
| Alignm gaps (pig, cow): | 47, 0 |
| Conread position: | 12-390 |
| Cow position: | chr5:27683222-27682857 (view UCSC Genome Browser custom track) |
| Alignm length: | 382 |
| Alignm identity: | 272 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 286, 44 |
| Conread position: | 12-427 |
| Cow position: | chr5:16104228-16103828 (view UCSC Genome Browser custom track) |
| Alignm length: | 421 |
| Alignm identity: | 281 |
| Alignm E-value: | 3e-37 |
| Alignm gaps (pig, cow): | 20, 34 |
| Conread position: | 15-359 |
| Cow position: | chr5:49101178-49101499 (view UCSC Genome Browser custom track) |
| Alignm length: | 345 |
| Alignm identity: | 239 |
| Alignm E-value: | 3e-37 |
| Alignm gaps (pig, cow): | 58, 0 |
| Conread position: | 15-563 |
| Cow position: | chr5:29008898-29009445 (view UCSC Genome Browser custom track) |
| Alignm length: | 556 |
| Alignm identity: | 407 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 346, 80 |
| Conread position: | 15-564 |
| Cow position: | chr5:51162454-51162991 (view UCSC Genome Browser custom track) |
| Alignm length: | 558 |
| Alignm identity: | 362 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 30, 71 |
| Conread position: | 19-557 |
| Cow position: | chr5:53627214-53626676 (view UCSC Genome Browser custom track) |
| Alignm length: | 558 |
| Alignm identity: | 366 |
| Alignm E-value: | 2.8026e-45 |
| Alignm gaps (pig, cow): | 23, 44 |
| Conread position: | 22-522 |
| Cow position: | chr5:47073457-47073952 (view UCSC Genome Browser custom track) |
| Alignm length: | 515 |
| Alignm identity: | 330 |
| Alignm E-value: | 9e-36 |
| Alignm gaps (pig, cow): | 128, 67 |
| Conread position: | 30-388 |
| Cow position: | chr5:7811993-7811643 (view UCSC Genome Browser custom track) |
| Alignm length: | 361 |
| Alignm identity: | 242 |
| Alignm E-value: | 5e-40 |
| Alignm gaps (pig, cow): | 272, 69 |
| Conread position: | 30-549 |
| Cow position: | chr5:47831551-47831035 (view UCSC Genome Browser custom track) |
| Alignm length: | 528 |
| Alignm identity: | 386 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 272, 60 |
| Conread position: | 30-567 |
| Cow position: | chr5:28031039-28031574 (view UCSC Genome Browser custom track) |
| Alignm length: | 547 |
| Alignm identity: | 400 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 266, 54 |
| Conread position: | 35-562 |
| Cow position: | chr5:49518225-49518749 (view UCSC Genome Browser custom track) |
| Alignm length: | 538 |
| Alignm identity: | 396 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 267, 55 |
| Conread position: | 38-559 |
| Cow position: | chr5:32674174-32673652 (view UCSC Genome Browser custom track) |
| Alignm length: | 533 |
| Alignm identity: | 419 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 265, 54 |
| Conread position: | 60-266 |
| Cow position: | chr5:23767882-23768081 (view UCSC Genome Browser custom track) |
| Alignm length: | 207 |
| Alignm identity: | 152 |
| Alignm E-value: | 2e-30 |
| Alignm gaps (pig, cow): | 30, 0 |
| Conread position: | 61-412 |
| Cow position: | chr5:57366432-57366086 (view UCSC Genome Browser custom track) |
| Alignm length: | 355 |
| Alignm identity: | 245 |
| Alignm E-value: | 2.8026e-45 |
| Alignm gaps (pig, cow): | 229, 34 |
| Conread position: | 81-359 |
| Cow position: | chr5:58061232-58060957 (view UCSC Genome Browser custom track) |
| Alignm length: | 280 |
| Alignm identity: | 191 |
| Alignm E-value: | 2e-34 |
| Alignm gaps (pig, cow): | 221, 16 |
| Conread position: | 83-315 |
| Cow position: | chr5:18653614-18653844 (view UCSC Genome Browser custom track) |
| Alignm length: | 233 |
| Alignm identity: | 133 |
| Alignm E-value: | 4e-28 |
| Alignm gaps (pig, cow): | 14, 0 |
| Conread position: | 89-561 |
| Cow position: | chr5:14659477-14659012 (view UCSC Genome Browser custom track) |
| Alignm length: | 484 |
| Alignm identity: | 329 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 207, 18 |
| Conread position: | 93-549 |
| Cow position: | chr5:6589406-6588942 (view UCSC Genome Browser custom track) |
| Alignm length: | 468 |
| Alignm identity: | 358 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 205, 252 |
| Conread position: | 94-538 |
| Cow position: | chr5:41933199-41932763 (view UCSC Genome Browser custom track) |
| Alignm length: | 449 |
| Alignm identity: | 283 |
| Alignm E-value: | 2e-31 |
| Alignm gaps (pig, cow): | 62, 80 |
| Conread position: | 96-564 |
| Cow position: | chr5:41962616-41962145 (view UCSC Genome Browser custom track) |
| Alignm length: | 479 |
| Alignm identity: | 367 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 202, 81 |
| Conread position: | 102-456 |
| Cow position: | chr5:4088427-4088789 (view UCSC Genome Browser custom track) |
| Alignm length: | 366 |
| Alignm identity: | 278 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 11, 245 |
| Conread position: | 102-537 |
| Cow position: | chr5:28335207-28334759 (view UCSC Genome Browser custom track) |
| Alignm length: | 453 |
| Alignm identity: | 285 |
| Alignm E-value: | 4e-29 |
| Alignm gaps (pig, cow): | 79, 73 |
| Conread position: | 120-471 |
| Cow position: | chr5:32310324-32309975 (view UCSC Genome Browser custom track) |
| Alignm length: | 361 |
| Alignm identity: | 230 |
| Alignm E-value: | 2e-22 |
| Alignm gaps (pig, cow): | 149, 225 |
| Conread position: | 121-559 |
| Cow position: | chr5:25001004-25000558 (view UCSC Genome Browser custom track) |
| Alignm length: | 457 |
| Alignm identity: | 331 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 148, 30 |
| Conread position: | 134-562 |
| Cow position: | chr5:26069057-26068638 (view UCSC Genome Browser custom track) |
| Alignm length: | 437 |
| Alignm identity: | 303 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 162, 133 |
| Conread position: | 137-515 |
| Cow position: | chr5:51319583-51319203 (view UCSC Genome Browser custom track) |
| Alignm length: | 392 |
| Alignm identity: | 258 |
| Alignm E-value: | 5e-31 |
| Alignm gaps (pig, cow): | 13, 35 |
| Conread position: | 155-473 |
| Cow position: | chr5:58819957-58819632 (view UCSC Genome Browser custom track) |
| Alignm length: | 329 |
| Alignm identity: | 251 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 143, 190 |
| Conread position: | 163-564 |
| Cow position: | chr5:52433662-52434058 (view UCSC Genome Browser custom track) |
| Alignm length: | 408 |
| Alignm identity: | 285 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 142, 37 |
| Conread position: | 171-469 |
| Cow position: | chr5:5318063-5317760 (view UCSC Genome Browser custom track) |
| Alignm length: | 307 |
| Alignm identity: | 232 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 190, 173 |
| Conread position: | 176-470 |
| Cow position: | chr5:18653740-18654043 (view UCSC Genome Browser custom track) |
| Alignm length: | 307 |
| Alignm identity: | 176 |
| Alignm E-value: | 7e-23 |
| Alignm gaps (pig, cow): | 33, 103 |
| Conread position: | 231-523 |
| Cow position: | chr5:23755868-23755567 (view UCSC Genome Browser custom track) |
| Alignm length: | 303 |
| Alignm identity: | 212 |
| Alignm E-value: | 4e-39 |
| Alignm gaps (pig, cow): | 74, 121 |
| Conread position: | 233-563 |
| Cow position: | chr5:20972277-20971954 (view UCSC Genome Browser custom track) |
| Alignm length: | 337 |
| Alignm identity: | 254 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 65, 112 |
| Conread position: | 237-427 |
| Cow position: | chr5:52805126-52805316 (view UCSC Genome Browser custom track) |
| Alignm length: | 195 |
| Alignm identity: | 160 |
| Alignm E-value: | 5.99756e-43 |
| Alignm gaps (pig, cow): | 65, 95 |
| Conread position: | 248-488 |
| Cow position: | chr5:24108818-24108573 (view UCSC Genome Browser custom track) |
| Alignm length: | 250 |
| Alignm identity: | 173 |
| Alignm E-value: | 3e-25 |
| Alignm gaps (pig, cow): | 114, 21 |
| Conread position: | 248-509 |
| Cow position: | chr5:5786829-5786569 (view UCSC Genome Browser custom track) |
| Alignm length: | 269 |
| Alignm identity: | 194 |
| Alignm E-value: | 9e-36 |
| Alignm gaps (pig, cow): | 115, 53 |
| Conread position: | 248-558 |
| Cow position: | chr5:39247606-39247318 (view UCSC Genome Browser custom track) |
| Alignm length: | 315 |
| Alignm identity: | 230 |
| Alignm E-value: | 4e-39 |
| Alignm gaps (pig, cow): | 48, 19 |
| Conread position: | 257-404 |
| Cow position: | chr5:27060465-27060314 (view UCSC Genome Browser custom track) |
| Alignm length: | 153 |
| Alignm identity: | 117 |
| Alignm E-value: | 8e-24 |
| Alignm gaps (pig, cow): | 44, 10 |
| Conread position: | 258-560 |
| Cow position: | chr5:27001389-27001696 (view UCSC Genome Browser custom track) |
| Alignm length: | 313 |
| Alignm identity: | 226 |
| Alignm E-value: | 7.00649e-44 |
| Alignm gaps (pig, cow): | 20, 55 |
| Conread position: | 259-561 |
| Cow position: | chr5:49128997-49129309 (view UCSC Genome Browser custom track) |
| Alignm length: | 317 |
| Alignm identity: | 210 |
| Alignm E-value: | 3e-24 |
| Alignm gaps (pig, cow): | 8, 50 |
| Conread position: | 264-536 |
| Cow position: | chr5:29436185-29435902 (view UCSC Genome Browser custom track) |
| Alignm length: | 288 |
| Alignm identity: | 217 |
| Alignm E-value: | 8.40779e-45 |
| Alignm gaps (pig, cow): | 12, 83 |
| Conread position: | 269-562 |
| Cow position: | chr5:73489769-73489470 (view UCSC Genome Browser custom track) |
| Alignm length: | 303 |
| Alignm identity: | 187 |
| Alignm E-value: | 4e-38 |
| Alignm gaps (pig, cow): | 94, 82 |
| Conread position: | 291-564 |
| Cow position: | chr5:27489061-27489340 (view UCSC Genome Browser custom track) |
| Alignm length: | 284 |
| Alignm identity: | 214 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 11, 54 |
| Conread position: | 328-517 |
| Cow position: | chr5:17774189-17773994 (view UCSC Genome Browser custom track) |
| Alignm length: | 197 |
| Alignm identity: | 150 |
| Alignm E-value: | 7e-33 |
| Alignm gaps (pig, cow): | 33, 24 |
| Conread position: | 339-548 |
| Cow position: | chr5:23960451-23960238 (view UCSC Genome Browser custom track) |
| Alignm length: | 216 |
| Alignm identity: | 129 |
| Alignm E-value: | 1e-27 |
| Alignm gaps (pig, cow): | 83, 66 |
| Conread position: | 354-538 |
| Cow position: | chr5:76123701-76123514 (view UCSC Genome Browser custom track) |
| Alignm length: | 190 |
| Alignm identity: | 146 |
| Alignm E-value: | 2e-33 |
| Alignm gaps (pig, cow): | 20, 61 |
| Conread position: | 363-563 |
| Cow position: | chr5:27570000-27570203 (view UCSC Genome Browser custom track) |
| Alignm length: | 206 |
| Alignm identity: | 149 |
| Alignm E-value: | 1e-27 |
| Alignm gaps (pig, cow): | 10, 25 |
| Conread position: | 372-549 |
| Cow position: | chr5:10843522-10843341 (view UCSC Genome Browser custom track) |
| Alignm length: | 184 |
| Alignm identity: | 137 |
| Alignm E-value: | 1e-26 |
| Alignm gaps (pig, cow): | 52, 33 |
| Conread position: | 386-562 |
| Cow position: | chr5:9042949-9043129 (view UCSC Genome Browser custom track) |
| Alignm length: | 183 |
| Alignm identity: | 134 |
| Alignm E-value: | 3e-25 |
| Alignm gaps (pig, cow): | 40, 19 |
| Conread position: | 391-567 |
| Cow position: | chr5:27682828-27682646 (view UCSC Genome Browser custom track) |
| Alignm length: | 184 |
| Alignm identity: | 133 |
| Alignm E-value: | 7e-23 |
| Alignm gaps (pig, cow): | 25, 10 |
| Conread position: | 423-570 |
| Cow position: | chr5:18665945-18666094 (view UCSC Genome Browser custom track) |
| Alignm length: | 150 |
| Alignm identity: | 113 |
| Alignm E-value: | 9e-25 |
| Alignm gaps (pig, cow): | 49, 0 |
| Conread position: | 431-565 |
| Cow position: | chr5:27059165-27059030 (view UCSC Genome Browser custom track) |
| Alignm length: | 136 |
| Alignm identity: | 103 |
| Alignm E-value: | 7e-23 |
| Alignm gaps (pig, cow): | 40, 0 |
| Conread position: | 431-565 |
| Cow position: | chr5:27060068-27059933 (view UCSC Genome Browser custom track) |
| Alignm length: | 136 |
| Alignm identity: | 103 |
| Alignm E-value: | 7e-23 |
| Alignm gaps (pig, cow): | 40, 0 |
Show alignments to all cow chromosomes.