Cow genome map

Conread name: Utr1-UTR010045E09

Conread position: 1-427
Cow position:
Alignm length: 435
Alignm identity: 331
Alignm E-value: 0
Alignm gaps (pig, cow): 28, 93

Conread position: 4-428
Cow position:
Alignm length: 429
Alignm identity: 294
Alignm E-value: 0
Alignm gaps (pig, cow): 6, 16

Conread position: 4-538
Cow position:
Alignm length: 547
Alignm identity: 347
Alignm E-value: 2e-40
Alignm gaps (pig, cow): 33, 98

Conread position: 4-563
Cow position:
Alignm length: 566
Alignm identity: 426
Alignm E-value: 0
Alignm gaps (pig, cow): 298, 86

Conread position: 5-333
Cow position:
Alignm length: 334
Alignm identity: 252
Alignm E-value: 0
Alignm gaps (pig, cow): 185, 26

Conread position: 5-360
Cow position:
Alignm length: 360
Alignm identity: 254
Alignm E-value: 0
Alignm gaps (pig, cow): 236, 27

Conread position: 5-517
Cow position:
Alignm length: 525
Alignm identity: 388
Alignm E-value: 0
Alignm gaps (pig, cow): 6, 86

Conread position: 5-549
Cow position:
Alignm length: 555
Alignm identity: 428
Alignm E-value: 0
Alignm gaps (pig, cow): 293, 85

Conread position: 5-563
Cow position:
Alignm length: 569
Alignm identity: 419
Alignm E-value: 0
Alignm gaps (pig, cow): 318, 90

Conread position: 5-564
Cow position:
Alignm length: 571
Alignm identity: 446
Alignm E-value: 0
Alignm gaps (pig, cow): 87, 213

Conread position: 5-564
Cow position:
Alignm length: 568
Alignm identity: 374
Alignm E-value: 0
Alignm gaps (pig, cow): 143, 30

Conread position: 5-565
Cow position:
Alignm length: 568
Alignm identity: 363
Alignm E-value: 7.00649e-44
Alignm gaps (pig, cow): 297, 86

Conread position: 5-567
Cow position:
Alignm length: 572
Alignm identity: 432
Alignm E-value: 0
Alignm gaps (pig, cow): 357, 30

Conread position: 5-568
Cow position:
Alignm length: 576
Alignm identity: 368
Alignm E-value: 0
Alignm gaps (pig, cow): 117, 86

Conread position: 6-136
Cow position:
Alignm length: 131
Alignm identity: 102
Alignm E-value: 7e-23
Alignm gaps (pig, cow): 83, 0

Conread position: 6-168
Cow position:
Alignm length: 163
Alignm identity: 132
Alignm E-value: 7e-33
Alignm gaps (pig, cow): 12, 0

Conread position: 6-178
Cow position:
Alignm length: 173
Alignm identity: 134
Alignm E-value: 8e-35
Alignm gaps (pig, cow): 83, 0

Conread position: 6-183
Cow position:
Alignm length: 178
Alignm identity: 132
Alignm E-value: 2e-30
Alignm gaps (pig, cow): 83, 0

Conread position: 6-248
Cow position:
Alignm length: 243
Alignm identity: 184
Alignm E-value: 0
Alignm gaps (pig, cow): 84, 0

Conread position: 6-249
Cow position:
Alignm length: 247
Alignm identity: 187
Alignm E-value: 1.99965e-42
Alignm gaps (pig, cow): 194, 42

Conread position: 6-264
Cow position:
Alignm length: 260
Alignm identity: 193
Alignm E-value: 1e-37
Alignm gaps (pig, cow): 25, 91

Conread position: 6-266
Cow position:
Alignm length: 270
Alignm identity: 198
Alignm E-value: 1e-37
Alignm gaps (pig, cow): 202, 29

Conread position: 6-317
Cow position:
Alignm length: 313
Alignm identity: 212
Alignm E-value: 1e-37
Alignm gaps (pig, cow): 197, 85

Conread position: 6-323
Cow position:
Alignm length: 333
Alignm identity: 216
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 89, 17

Conread position: 6-361
Cow position:
Alignm length: 357
Alignm identity: 264
Alignm E-value: 0
Alignm gaps (pig, cow): 296, 84

Conread position: 6-397
Cow position:
Alignm length: 396
Alignm identity: 297
Alignm E-value: 0
Alignm gaps (pig, cow): 295, 84

Conread position: 6-423
Cow position:
Alignm length: 424
Alignm identity: 281
Alignm E-value: 3e-35
Alignm gaps (pig, cow): 97, 62

Conread position: 6-495
Cow position:
Alignm length: 501
Alignm identity: 364
Alignm E-value: 0
Alignm gaps (pig, cow): 292, 84

Conread position: 6-520
Cow position:
Alignm length: 522
Alignm identity: 389
Alignm E-value: 0
Alignm gaps (pig, cow): 289, 89

Conread position: 6-521
Cow position:
Alignm length: 526
Alignm identity: 395
Alignm E-value: 0
Alignm gaps (pig, cow): 293, 83

Conread position: 6-531
Cow position:
Alignm length: 535
Alignm identity: 400
Alignm E-value: 0
Alignm gaps (pig, cow): 89, 340

Conread position: 6-533
Cow position:
Alignm length: 535
Alignm identity: 410
Alignm E-value: 0
Alignm gaps (pig, cow): 141, 84

Conread position: 6-537
Cow position:
Alignm length: 543
Alignm identity: 407
Alignm E-value: 0
Alignm gaps (pig, cow): 26, 85

Conread position: 6-538
Cow position:
Alignm length: 544
Alignm identity: 395
Alignm E-value: 0
Alignm gaps (pig, cow): 202, 89

Conread position: 6-545
Cow position:
Alignm length: 550
Alignm identity: 432
Alignm E-value: 0
Alignm gaps (pig, cow): 287, 84

Conread position: 6-548
Cow position:
Alignm length: 553
Alignm identity: 427
Alignm E-value: 0
Alignm gaps (pig, cow): 293, 50

Conread position: 6-549
Cow position:
Alignm length: 554
Alignm identity: 412
Alignm E-value: 0
Alignm gaps (pig, cow): 296, 84

Conread position: 6-549
Cow position:
Alignm length: 554
Alignm identity: 420
Alignm E-value: 0
Alignm gaps (pig, cow): 296, 84

Conread position: 6-549
Cow position:
Alignm length: 554
Alignm identity: 418
Alignm E-value: 0
Alignm gaps (pig, cow): 291, 84

Conread position: 6-549
Cow position:
Alignm length: 554
Alignm identity: 426
Alignm E-value: 0
Alignm gaps (pig, cow): 292, 84

Conread position: 6-549
Cow position:
Alignm length: 555
Alignm identity: 407
Alignm E-value: 0
Alignm gaps (pig, cow): 202, 83

Conread position: 6-549
Cow position:
Alignm length: 554
Alignm identity: 421
Alignm E-value: 0
Alignm gaps (pig, cow): 292, 84

Conread position: 6-549
Cow position:
Alignm length: 559
Alignm identity: 419
Alignm E-value: 0
Alignm gaps (pig, cow): 292, 84

Conread position: 6-549
Cow position:
Alignm length: 558
Alignm identity: 415
Alignm E-value: 0
Alignm gaps (pig, cow): 278, 84

Conread position: 6-549
Cow position:
Alignm length: 554
Alignm identity: 419
Alignm E-value: 0
Alignm gaps (pig, cow): 292, 84

Conread position: 6-556
Cow position:
Alignm length: 562
Alignm identity: 419
Alignm E-value: 0
Alignm gaps (pig, cow): 296, 84

Conread position: 6-557
Cow position:
Alignm length: 562
Alignm identity: 408
Alignm E-value: 0
Alignm gaps (pig, cow): 296, 84

Conread position: 6-557
Cow position:
Alignm length: 566
Alignm identity: 414
Alignm E-value: 0
Alignm gaps (pig, cow): 84, 185

Conread position: 6-560
Cow position:
Alignm length: 564
Alignm identity: 355
Alignm E-value: 4e-39
Alignm gaps (pig, cow): 293, 62

Conread position: 6-561
Cow position:
Alignm length: 564
Alignm identity: 411
Alignm E-value: 0
Alignm gaps (pig, cow): 25, 91

Conread position: 6-562
Cow position:
Alignm length: 567
Alignm identity: 430
Alignm E-value: 0
Alignm gaps (pig, cow): 295, 84

Conread position: 6-562
Cow position:
Alignm length: 567
Alignm identity: 422
Alignm E-value: 0
Alignm gaps (pig, cow): 293, 84

Conread position: 6-562
Cow position:
Alignm length: 567
Alignm identity: 427
Alignm E-value: 0
Alignm gaps (pig, cow): 292, 84

Conread position: 6-562
Cow position:
Alignm length: 566
Alignm identity: 402
Alignm E-value: 0
Alignm gaps (pig, cow): 213, 89

Conread position: 6-562
Cow position:
Alignm length: 566
Alignm identity: 418
Alignm E-value: 0
Alignm gaps (pig, cow): 355, 39

Conread position: 6-563
Cow position:
Alignm length: 568
Alignm identity: 412
Alignm E-value: 0
Alignm gaps (pig, cow): 296, 84

Conread position: 6-563
Cow position:
Alignm length: 568
Alignm identity: 422
Alignm E-value: 0
Alignm gaps (pig, cow): 293, 84

Conread position: 6-563
Cow position:
Alignm length: 567
Alignm identity: 409
Alignm E-value: 0
Alignm gaps (pig, cow): 292, 84

Conread position: 6-563
Cow position:
Alignm length: 568
Alignm identity: 430
Alignm E-value: 0
Alignm gaps (pig, cow): 296, 84

Conread position: 6-563
Cow position:
Alignm length: 590
Alignm identity: 411
Alignm E-value: 0
Alignm gaps (pig, cow): 230, 84

Conread position: 6-563
Cow position:
Alignm length: 570
Alignm identity: 434
Alignm E-value: 0
Alignm gaps (pig, cow): 25, 83

Conread position: 6-563
Cow position:
Alignm length: 561
Alignm identity: 409
Alignm E-value: 0
Alignm gaps (pig, cow): 296, 51

Conread position: 6-563
Cow position:
Alignm length: 568
Alignm identity: 449
Alignm E-value: 0
Alignm gaps (pig, cow): 298, 84

Conread position: 6-563
Cow position:
Alignm length: 564
Alignm identity: 423
Alignm E-value: 0
Alignm gaps (pig, cow): 37, 68

Conread position: 6-563
Cow position:
Alignm length: 587
Alignm identity: 428
Alignm E-value: 0
Alignm gaps (pig, cow): 108, 34

Conread position: 6-563
Cow position:
Alignm length: 568
Alignm identity: 418
Alignm E-value: 0
Alignm gaps (pig, cow): 89, 143

Conread position: 6-563
Cow position:
Alignm length: 568
Alignm identity: 417
Alignm E-value: 0
Alignm gaps (pig, cow): 296, 84

Conread position: 6-563
Cow position:
Alignm length: 574
Alignm identity: 410
Alignm E-value: 0
Alignm gaps (pig, cow): 210, 84

Conread position: 6-563
Cow position:
Alignm length: 568
Alignm identity: 421
Alignm E-value: 0
Alignm gaps (pig, cow): 190, 84

Conread position: 6-563
Cow position:
Alignm length: 568
Alignm identity: 426
Alignm E-value: 0
Alignm gaps (pig, cow): 296, 84

Conread position: 6-564
Cow position:
Alignm length: 569
Alignm identity: 409
Alignm E-value: 0
Alignm gaps (pig, cow): 355, 90

Conread position: 6-566
Cow position:
Alignm length: 566
Alignm identity: 412
Alignm E-value: 0
Alignm gaps (pig, cow): 293, 26

Conread position: 6-566
Cow position:
Alignm length: 586
Alignm identity: 429
Alignm E-value: 0
Alignm gaps (pig, cow): 89, 31

Conread position: 6-566
Cow position:
Alignm length: 570
Alignm identity: 423
Alignm E-value: 0
Alignm gaps (pig, cow): 357, 84

Conread position: 6-567
Cow position:
Alignm length: 574
Alignm identity: 424
Alignm E-value: 0
Alignm gaps (pig, cow): 56, 85

Conread position: 6-567
Cow position:
Alignm length: 569
Alignm identity: 413
Alignm E-value: 0
Alignm gaps (pig, cow): 290, 16

Conread position: 6-567
Cow position:
Alignm length: 574
Alignm identity: 441
Alignm E-value: 0
Alignm gaps (pig, cow): 293, 84

Conread position: 7-184
Cow position:
Alignm length: 179
Alignm identity: 138
Alignm E-value: 2e-34
Alignm gaps (pig, cow): 85, 152

Conread position: 7-548
Cow position:
Alignm length: 552
Alignm identity: 421
Alignm E-value: 0
Alignm gaps (pig, cow): 295, 83

Conread position: 8-192
Cow position:
Alignm length: 185
Alignm identity: 144
Alignm E-value: 1e-38
Alignm gaps (pig, cow): 81, 0

Conread position: 8-563
Cow position:
Alignm length: 565
Alignm identity: 418
Alignm E-value: 0
Alignm gaps (pig, cow): 287, 83

Conread position: 9-539
Cow position:
Alignm length: 546
Alignm identity: 389
Alignm E-value: 0
Alignm gaps (pig, cow): 125, 79

Conread position: 10-170
Cow position:
Alignm length: 164
Alignm identity: 129
Alignm E-value: 2e-31
Alignm gaps (pig, cow): 82, 9

Conread position: 10-272
Cow position:
Alignm length: 263
Alignm identity: 169
Alignm E-value: 3e-24
Alignm gaps (pig, cow): 85, 0

Conread position: 10-391
Cow position:
Alignm length: 393
Alignm identity: 295
Alignm E-value: 0
Alignm gaps (pig, cow): 289, 80

Conread position: 10-538
Cow position:
Alignm length: 539
Alignm identity: 407
Alignm E-value: 0
Alignm gaps (pig, cow): 351, 13

Conread position: 10-549
Cow position:
Alignm length: 549
Alignm identity: 402
Alignm E-value: 0
Alignm gaps (pig, cow): 288, 80

Conread position: 10-560
Cow position:
Alignm length: 561
Alignm identity: 358
Alignm E-value: 1.96182e-44
Alignm gaps (pig, cow): 108, 85

Conread position: 10-562
Cow position:
Alignm length: 563
Alignm identity: 399
Alignm E-value: 0
Alignm gaps (pig, cow): 292, 88

Conread position: 10-563
Cow position:
Alignm length: 567
Alignm identity: 421
Alignm E-value: 0
Alignm gaps (pig, cow): 159, 85

Conread position: 11-275
Cow position:
Alignm length: 265
Alignm identity: 181
Alignm E-value: 2e-33
Alignm gaps (pig, cow): 84, 0

Conread position: 11-531
Cow position:
Alignm length: 534
Alignm identity: 355
Alignm E-value: 0
Alignm gaps (pig, cow): 26, 13

Conread position: 11-550
Cow position:
Alignm length: 548
Alignm identity: 416
Alignm E-value: 0
Alignm gaps (pig, cow): 287, 84

Conread position: 12-265
Cow position:
Alignm length: 254
Alignm identity: 165
Alignm E-value: 2e-22
Alignm gaps (pig, cow): 76, 0

Conread position: 12-300
Cow position:
Alignm length: 289
Alignm identity: 196
Alignm E-value: 3e-35
Alignm gaps (pig, cow): 47, 0

Conread position: 12-390
Cow position:
Alignm length: 382
Alignm identity: 272
Alignm E-value: 0
Alignm gaps (pig, cow): 286, 44

Conread position: 12-427
Cow position:
Alignm length: 421
Alignm identity: 281
Alignm E-value: 3e-37
Alignm gaps (pig, cow): 20, 34

Conread position: 15-359
Cow position:
Alignm length: 345
Alignm identity: 239
Alignm E-value: 3e-37
Alignm gaps (pig, cow): 58, 0

Conread position: 15-563
Cow position:
Alignm length: 556
Alignm identity: 407
Alignm E-value: 0
Alignm gaps (pig, cow): 346, 80

Conread position: 15-564
Cow position:
Alignm length: 558
Alignm identity: 362
Alignm E-value: 0
Alignm gaps (pig, cow): 30, 71

Conread position: 19-557
Cow position:
Alignm length: 558
Alignm identity: 366
Alignm E-value: 2.8026e-45
Alignm gaps (pig, cow): 23, 44

Conread position: 22-522
Cow position:
Alignm length: 515
Alignm identity: 330
Alignm E-value: 9e-36
Alignm gaps (pig, cow): 128, 67

Conread position: 30-388
Cow position:
Alignm length: 361
Alignm identity: 242
Alignm E-value: 5e-40
Alignm gaps (pig, cow): 272, 69

Conread position: 30-549
Cow position:
Alignm length: 528
Alignm identity: 386
Alignm E-value: 0
Alignm gaps (pig, cow): 272, 60

Conread position: 30-567
Cow position:
Alignm length: 547
Alignm identity: 400
Alignm E-value: 0
Alignm gaps (pig, cow): 266, 54

Conread position: 35-562
Cow position:
Alignm length: 538
Alignm identity: 396
Alignm E-value: 0
Alignm gaps (pig, cow): 267, 55

Conread position: 38-559
Cow position:
Alignm length: 533
Alignm identity: 419
Alignm E-value: 0
Alignm gaps (pig, cow): 265, 54

Conread position: 60-266
Cow position:
Alignm length: 207
Alignm identity: 152
Alignm E-value: 2e-30
Alignm gaps (pig, cow): 30, 0

Conread position: 61-412
Cow position:
Alignm length: 355
Alignm identity: 245
Alignm E-value: 2.8026e-45
Alignm gaps (pig, cow): 229, 34

Conread position: 81-359
Cow position:
Alignm length: 280
Alignm identity: 191
Alignm E-value: 2e-34
Alignm gaps (pig, cow): 221, 16

Conread position: 83-315
Cow position:
Alignm length: 233
Alignm identity: 133
Alignm E-value: 4e-28
Alignm gaps (pig, cow): 14, 0

Conread position: 89-561
Cow position:
Alignm length: 484
Alignm identity: 329
Alignm E-value: 0
Alignm gaps (pig, cow): 207, 18

Conread position: 93-549
Cow position:
Alignm length: 468
Alignm identity: 358
Alignm E-value: 0
Alignm gaps (pig, cow): 205, 252

Conread position: 94-538
Cow position:
Alignm length: 449
Alignm identity: 283
Alignm E-value: 2e-31
Alignm gaps (pig, cow): 62, 80

Conread position: 96-564
Cow position:
Alignm length: 479
Alignm identity: 367
Alignm E-value: 0
Alignm gaps (pig, cow): 202, 81

Conread position: 102-456
Cow position:
Alignm length: 366
Alignm identity: 278
Alignm E-value: 0
Alignm gaps (pig, cow): 11, 245

Conread position: 102-537
Cow position:
Alignm length: 453
Alignm identity: 285
Alignm E-value: 4e-29
Alignm gaps (pig, cow): 79, 73

Conread position: 120-471
Cow position:
Alignm length: 361
Alignm identity: 230
Alignm E-value: 2e-22
Alignm gaps (pig, cow): 149, 225

Conread position: 121-559
Cow position:
Alignm length: 457
Alignm identity: 331
Alignm E-value: 0
Alignm gaps (pig, cow): 148, 30

Conread position: 134-562
Cow position:
Alignm length: 437
Alignm identity: 303
Alignm E-value: 0
Alignm gaps (pig, cow): 162, 133

Conread position: 137-515
Cow position:
Alignm length: 392
Alignm identity: 258
Alignm E-value: 5e-31
Alignm gaps (pig, cow): 13, 35

Conread position: 155-473
Cow position:
Alignm length: 329
Alignm identity: 251
Alignm E-value: 0
Alignm gaps (pig, cow): 143, 190

Conread position: 163-564
Cow position:
Alignm length: 408
Alignm identity: 285
Alignm E-value: 0
Alignm gaps (pig, cow): 142, 37

Conread position: 171-469
Cow position:
Alignm length: 307
Alignm identity: 232
Alignm E-value: 0
Alignm gaps (pig, cow): 190, 173

Conread position: 176-470
Cow position:
Alignm length: 307
Alignm identity: 176
Alignm E-value: 7e-23
Alignm gaps (pig, cow): 33, 103

Conread position: 231-523
Cow position:
Alignm length: 303
Alignm identity: 212
Alignm E-value: 4e-39
Alignm gaps (pig, cow): 74, 121

Conread position: 233-563
Cow position:
Alignm length: 337
Alignm identity: 254
Alignm E-value: 0
Alignm gaps (pig, cow): 65, 112

Conread position: 237-427
Cow position:
Alignm length: 195
Alignm identity: 160
Alignm E-value: 5.99756e-43
Alignm gaps (pig, cow): 65, 95

Conread position: 248-488
Cow position:
Alignm length: 250
Alignm identity: 173
Alignm E-value: 3e-25
Alignm gaps (pig, cow): 114, 21

Conread position: 248-509
Cow position:
Alignm length: 269
Alignm identity: 194
Alignm E-value: 9e-36
Alignm gaps (pig, cow): 115, 53

Conread position: 248-558
Cow position:
Alignm length: 315
Alignm identity: 230
Alignm E-value: 4e-39
Alignm gaps (pig, cow): 48, 19

Conread position: 257-404
Cow position:
Alignm length: 153
Alignm identity: 117
Alignm E-value: 8e-24
Alignm gaps (pig, cow): 44, 10

Conread position: 258-560
Cow position:
Alignm length: 313
Alignm identity: 226
Alignm E-value: 7.00649e-44
Alignm gaps (pig, cow): 20, 55

Conread position: 259-561
Cow position:
Alignm length: 317
Alignm identity: 210
Alignm E-value: 3e-24
Alignm gaps (pig, cow): 8, 50

Conread position: 264-536
Cow position:
Alignm length: 288
Alignm identity: 217
Alignm E-value: 8.40779e-45
Alignm gaps (pig, cow): 12, 83

Conread position: 269-562
Cow position:
Alignm length: 303
Alignm identity: 187
Alignm E-value: 4e-38
Alignm gaps (pig, cow): 94, 82

Conread position: 291-564
Cow position:
Alignm length: 284
Alignm identity: 214
Alignm E-value: 0
Alignm gaps (pig, cow): 11, 54

Conread position: 328-517
Cow position:
Alignm length: 197
Alignm identity: 150
Alignm E-value: 7e-33
Alignm gaps (pig, cow): 33, 24

Conread position: 339-548
Cow position:
Alignm length: 216
Alignm identity: 129
Alignm E-value: 1e-27
Alignm gaps (pig, cow): 83, 66

Conread position: 354-538
Cow position:
Alignm length: 190
Alignm identity: 146
Alignm E-value: 2e-33
Alignm gaps (pig, cow): 20, 61

Conread position: 363-563
Cow position:
Alignm length: 206
Alignm identity: 149
Alignm E-value: 1e-27
Alignm gaps (pig, cow): 10, 25

Conread position: 372-549
Cow position:
Alignm length: 184
Alignm identity: 137
Alignm E-value: 1e-26
Alignm gaps (pig, cow): 52, 33

Conread position: 386-562
Cow position:
Alignm length: 183
Alignm identity: 134
Alignm E-value: 3e-25
Alignm gaps (pig, cow): 40, 19

Conread position: 391-567
Cow position:
Alignm length: 184
Alignm identity: 133
Alignm E-value: 7e-23
Alignm gaps (pig, cow): 25, 10

Conread position: 423-570
Cow position:
Alignm length: 150
Alignm identity: 113
Alignm E-value: 9e-25
Alignm gaps (pig, cow): 49, 0

Conread position: 431-565
Cow position:
Alignm length: 136
Alignm identity: 103
Alignm E-value: 7e-23
Alignm gaps (pig, cow): 40, 0

Conread position: 431-565
Cow position:
Alignm length: 136
Alignm identity: 103
Alignm E-value: 7e-23
Alignm gaps (pig, cow): 40, 0

Show alignments to all cow chromosomes.