Cow genome map

Conread name: Utr1-UTR010045E09

Conread position: 4-277
Cow position:
Alignm length: 274
Alignm identity: 197
Alignm E-value: 1.4013e-45
Alignm gaps (pig, cow): 85, 0

Conread position: 4-282
Cow position:
Alignm length: 279
Alignm identity: 211
Alignm E-value: 0
Alignm gaps (pig, cow): 15, 0

Conread position: 4-537
Cow position:
Alignm length: 545
Alignm identity: 388
Alignm E-value: 0
Alignm gaps (pig, cow): 355, 83

Conread position: 5-160
Cow position:
Alignm length: 156
Alignm identity: 119
Alignm E-value: 1e-26
Alignm gaps (pig, cow): 71, 0

Conread position: 5-228
Cow position:
Alignm length: 224
Alignm identity: 164
Alignm E-value: 7e-35
Alignm gaps (pig, cow): 18, 0

Conread position: 5-244
Cow position:
Alignm length: 240
Alignm identity: 158
Alignm E-value: 6e-22
Alignm gaps (pig, cow): 12, 0

Conread position: 5-295
Cow position:
Alignm length: 291
Alignm identity: 220
Alignm E-value: 0
Alignm gaps (pig, cow): 90, 0

Conread position: 5-403
Cow position:
Alignm length: 407
Alignm identity: 256
Alignm E-value: 8e-25
Alignm gaps (pig, cow): 5, 58

Conread position: 5-416
Cow position:
Alignm length: 424
Alignm identity: 315
Alignm E-value: 0
Alignm gaps (pig, cow): 47, 87

Conread position: 5-425
Cow position:
Alignm length: 424
Alignm identity: 321
Alignm E-value: 0
Alignm gaps (pig, cow): 277, 43

Conread position: 5-549
Cow position:
Alignm length: 560
Alignm identity: 423
Alignm E-value: 0
Alignm gaps (pig, cow): 228, 85

Conread position: 5-558
Cow position:
Alignm length: 561
Alignm identity: 400
Alignm E-value: 0
Alignm gaps (pig, cow): 288, 76

Conread position: 5-560
Cow position:
Alignm length: 566
Alignm identity: 366
Alignm E-value: 1.4013e-45
Alignm gaps (pig, cow): 14, 45

Conread position: 5-564
Cow position:
Alignm length: 571
Alignm identity: 416
Alignm E-value: 0
Alignm gaps (pig, cow): 29, 18

Conread position: 5-564
Cow position:
Alignm length: 574
Alignm identity: 445
Alignm E-value: 0
Alignm gaps (pig, cow): 61, 18

Conread position: 6-135
Cow position:
Alignm length: 130
Alignm identity: 98
Alignm E-value: 5e-21
Alignm gaps (pig, cow): 83, 0

Conread position: 6-136
Cow position:
Alignm length: 131
Alignm identity: 99
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 83, 0

Conread position: 6-225
Cow position:
Alignm length: 220
Alignm identity: 163
Alignm E-value: 8e-36
Alignm gaps (pig, cow): 83, 0

Conread position: 6-225
Cow position:
Alignm length: 220
Alignm identity: 168
Alignm E-value: 7.00649e-45
Alignm gaps (pig, cow): 84, 0

Conread position: 6-250
Cow position:
Alignm length: 245
Alignm identity: 183
Alignm E-value: 0
Alignm gaps (pig, cow): 84, 0

Conread position: 6-250
Cow position:
Alignm length: 246
Alignm identity: 182
Alignm E-value: 3e-38
Alignm gaps (pig, cow): 13, 90

Conread position: 6-271
Cow position:
Alignm length: 267
Alignm identity: 213
Alignm E-value: 0
Alignm gaps (pig, cow): 89, 24

Conread position: 6-271
Cow position:
Alignm length: 266
Alignm identity: 198
Alignm E-value: 0
Alignm gaps (pig, cow): 84, 0

Conread position: 6-275
Cow position:
Alignm length: 270
Alignm identity: 210
Alignm E-value: 0
Alignm gaps (pig, cow): 84, 0

Conread position: 6-291
Cow position:
Alignm length: 286
Alignm identity: 218
Alignm E-value: 0
Alignm gaps (pig, cow): 84, 0

Conread position: 6-293
Cow position:
Alignm length: 288
Alignm identity: 220
Alignm E-value: 0
Alignm gaps (pig, cow): 84, 0

Conread position: 6-318
Cow position:
Alignm length: 314
Alignm identity: 188
Alignm E-value: 4.99983e-42
Alignm gaps (pig, cow): 301, 83

Conread position: 6-322
Cow position:
Alignm length: 318
Alignm identity: 245
Alignm E-value: 0
Alignm gaps (pig, cow): 289, 84

Conread position: 6-371
Cow position:
Alignm length: 368
Alignm identity: 265
Alignm E-value: 0
Alignm gaps (pig, cow): 355, 13

Conread position: 6-380
Cow position:
Alignm length: 379
Alignm identity: 288
Alignm E-value: 0
Alignm gaps (pig, cow): 293, 44

Conread position: 6-406
Cow position:
Alignm length: 403
Alignm identity: 310
Alignm E-value: 0
Alignm gaps (pig, cow): 293, 57

Conread position: 6-485
Cow position:
Alignm length: 490
Alignm identity: 376
Alignm E-value: 0
Alignm gaps (pig, cow): 291, 84

Conread position: 6-503
Cow position:
Alignm length: 517
Alignm identity: 379
Alignm E-value: 0
Alignm gaps (pig, cow): 293, 84

Conread position: 6-511
Cow position:
Alignm length: 527
Alignm identity: 391
Alignm E-value: 0
Alignm gaps (pig, cow): 223, 84

Conread position: 6-513
Cow position:
Alignm length: 523
Alignm identity: 393
Alignm E-value: 0
Alignm gaps (pig, cow): 191, 84

Conread position: 6-531
Cow position:
Alignm length: 532
Alignm identity: 401
Alignm E-value: 0
Alignm gaps (pig, cow): 419, 84

Conread position: 6-531
Cow position:
Alignm length: 536
Alignm identity: 392
Alignm E-value: 0
Alignm gaps (pig, cow): 293, 67

Conread position: 6-540
Cow position:
Alignm length: 552
Alignm identity: 418
Alignm E-value: 0
Alignm gaps (pig, cow): 72, 19

Conread position: 6-549
Cow position:
Alignm length: 557
Alignm identity: 423
Alignm E-value: 0
Alignm gaps (pig, cow): 137, 84

Conread position: 6-549
Cow position:
Alignm length: 554
Alignm identity: 417
Alignm E-value: 0
Alignm gaps (pig, cow): 292, 83

Conread position: 6-549
Cow position:
Alignm length: 554
Alignm identity: 419
Alignm E-value: 0
Alignm gaps (pig, cow): 292, 84

Conread position: 6-549
Cow position:
Alignm length: 548
Alignm identity: 401
Alignm E-value: 0
Alignm gaps (pig, cow): 292, 84

Conread position: 6-549
Cow position:
Alignm length: 571
Alignm identity: 421
Alignm E-value: 0
Alignm gaps (pig, cow): 115, 84

Conread position: 6-549
Cow position:
Alignm length: 552
Alignm identity: 405
Alignm E-value: 0
Alignm gaps (pig, cow): 290, 84

Conread position: 6-549
Cow position:
Alignm length: 558
Alignm identity: 424
Alignm E-value: 0
Alignm gaps (pig, cow): 254, 84

Conread position: 6-549
Cow position:
Alignm length: 550
Alignm identity: 412
Alignm E-value: 0
Alignm gaps (pig, cow): 355, 84

Conread position: 6-549
Cow position:
Alignm length: 553
Alignm identity: 410
Alignm E-value: 0
Alignm gaps (pig, cow): 355, 101

Conread position: 6-549
Cow position:
Alignm length: 554
Alignm identity: 421
Alignm E-value: 0
Alignm gaps (pig, cow): 292, 84

Conread position: 6-549
Cow position:
Alignm length: 564
Alignm identity: 424
Alignm E-value: 0
Alignm gaps (pig, cow): 271, 84

Conread position: 6-557
Cow position:
Alignm length: 562
Alignm identity: 424
Alignm E-value: 0
Alignm gaps (pig, cow): 292, 84

Conread position: 6-557
Cow position:
Alignm length: 562
Alignm identity: 428
Alignm E-value: 0
Alignm gaps (pig, cow): 292, 84

Conread position: 6-557
Cow position:
Alignm length: 561
Alignm identity: 419
Alignm E-value: 0
Alignm gaps (pig, cow): 355, 69

Conread position: 6-557
Cow position:
Alignm length: 567
Alignm identity: 420
Alignm E-value: 0
Alignm gaps (pig, cow): 292, 84

Conread position: 6-557
Cow position:
Alignm length: 562
Alignm identity: 419
Alignm E-value: 0
Alignm gaps (pig, cow): 296, 84

Conread position: 6-557
Cow position:
Alignm length: 562
Alignm identity: 419
Alignm E-value: 0
Alignm gaps (pig, cow): 292, 84

Conread position: 6-562
Cow position:
Alignm length: 566
Alignm identity: 423
Alignm E-value: 0
Alignm gaps (pig, cow): 355, 83

Conread position: 6-562
Cow position:
Alignm length: 569
Alignm identity: 427
Alignm E-value: 0
Alignm gaps (pig, cow): 293, 84

Conread position: 6-562
Cow position:
Alignm length: 568
Alignm identity: 422
Alignm E-value: 0
Alignm gaps (pig, cow): 93, 83

Conread position: 6-563
Cow position:
Alignm length: 568
Alignm identity: 430
Alignm E-value: 0
Alignm gaps (pig, cow): 296, 84

Conread position: 6-563
Cow position:
Alignm length: 568
Alignm identity: 422
Alignm E-value: 0
Alignm gaps (pig, cow): 296, 82

Conread position: 6-563
Cow position:
Alignm length: 572
Alignm identity: 420
Alignm E-value: 0
Alignm gaps (pig, cow): 293, 84

Conread position: 6-563
Cow position:
Alignm length: 568
Alignm identity: 422
Alignm E-value: 0
Alignm gaps (pig, cow): 293, 84

Conread position: 6-563
Cow position:
Alignm length: 567
Alignm identity: 414
Alignm E-value: 0
Alignm gaps (pig, cow): 289, 84

Conread position: 6-563
Cow position:
Alignm length: 564
Alignm identity: 428
Alignm E-value: 0
Alignm gaps (pig, cow): 261, 86

Conread position: 6-563
Cow position:
Alignm length: 566
Alignm identity: 422
Alignm E-value: 0
Alignm gaps (pig, cow): 296, 84

Conread position: 6-563
Cow position:
Alignm length: 569
Alignm identity: 427
Alignm E-value: 0
Alignm gaps (pig, cow): 296, 84

Conread position: 6-563
Cow position:
Alignm length: 568
Alignm identity: 417
Alignm E-value: 0
Alignm gaps (pig, cow): 293, 70

Conread position: 6-563
Cow position:
Alignm length: 569
Alignm identity: 420
Alignm E-value: 0
Alignm gaps (pig, cow): 355, 84

Conread position: 6-563
Cow position:
Alignm length: 571
Alignm identity: 431
Alignm E-value: 0
Alignm gaps (pig, cow): 296, 84

Conread position: 6-563
Cow position:
Alignm length: 569
Alignm identity: 429
Alignm E-value: 0
Alignm gaps (pig, cow): 68, 64

Conread position: 6-564
Cow position:
Alignm length: 565
Alignm identity: 440
Alignm E-value: 0
Alignm gaps (pig, cow): 269, 8

Conread position: 6-564
Cow position:
Alignm length: 571
Alignm identity: 419
Alignm E-value: 0
Alignm gaps (pig, cow): 206, 84

Conread position: 6-566
Cow position:
Alignm length: 575
Alignm identity: 432
Alignm E-value: 0
Alignm gaps (pig, cow): 292, 84

Conread position: 7-342
Cow position:
Alignm length: 337
Alignm identity: 236
Alignm E-value: 1.4013e-45
Alignm gaps (pig, cow): 295, 89

Conread position: 7-563
Cow position:
Alignm length: 572
Alignm identity: 411
Alignm E-value: 0
Alignm gaps (pig, cow): 59, 88

Conread position: 7-563
Cow position:
Alignm length: 566
Alignm identity: 418
Alignm E-value: 0
Alignm gaps (pig, cow): 295, 83

Conread position: 8-557
Cow position:
Alignm length: 556
Alignm identity: 416
Alignm E-value: 0
Alignm gaps (pig, cow): 25, 88

Conread position: 8-562
Cow position:
Alignm length: 569
Alignm identity: 424
Alignm E-value: 0
Alignm gaps (pig, cow): 101, 82

Conread position: 8-563
Cow position:
Alignm length: 566
Alignm identity: 417
Alignm E-value: 0
Alignm gaps (pig, cow): 291, 82

Conread position: 8-563
Cow position:
Alignm length: 566
Alignm identity: 420
Alignm E-value: 0
Alignm gaps (pig, cow): 294, 82

Conread position: 10-427
Cow position:
Alignm length: 423
Alignm identity: 323
Alignm E-value: 0
Alignm gaps (pig, cow): 177, 85

Conread position: 10-548
Cow position:
Alignm length: 551
Alignm identity: 383
Alignm E-value: 0
Alignm gaps (pig, cow): 214, 79

Conread position: 10-560
Cow position:
Alignm length: 564
Alignm identity: 368
Alignm E-value: 0
Alignm gaps (pig, cow): 14, 88

Conread position: 10-563
Cow position:
Alignm length: 569
Alignm identity: 412
Alignm E-value: 0
Alignm gaps (pig, cow): 292, 66

Conread position: 11-559
Cow position:
Alignm length: 559
Alignm identity: 361
Alignm E-value: 0
Alignm gaps (pig, cow): 99, 57

Conread position: 15-258
Cow position:
Alignm length: 244
Alignm identity: 186
Alignm E-value: 0
Alignm gaps (pig, cow): 75, 0

Conread position: 15-260
Cow position:
Alignm length: 246
Alignm identity: 174
Alignm E-value: 5e-31
Alignm gaps (pig, cow): 76, 0

Conread position: 15-265
Cow position:
Alignm length: 251
Alignm identity: 168
Alignm E-value: 4e-30
Alignm gaps (pig, cow): 80, 0

Conread position: 15-549
Cow position:
Alignm length: 545
Alignm identity: 414
Alignm E-value: 0
Alignm gaps (pig, cow): 283, 75

Conread position: 15-562
Cow position:
Alignm length: 560
Alignm identity: 369
Alignm E-value: 0
Alignm gaps (pig, cow): 73, 99

Conread position: 15-564
Cow position:
Alignm length: 560
Alignm identity: 400
Alignm E-value: 0
Alignm gaps (pig, cow): 284, 42

Conread position: 15-564
Cow position:
Alignm length: 566
Alignm identity: 426
Alignm E-value: 0
Alignm gaps (pig, cow): 287, 30

Conread position: 18-300
Cow position:
Alignm length: 284
Alignm identity: 193
Alignm E-value: 2e-35
Alignm gaps (pig, cow): 77, 37

Conread position: 18-538
Cow position:
Alignm length: 539
Alignm identity: 406
Alignm E-value: 0
Alignm gaps (pig, cow): 346, 68

Conread position: 19-529
Cow position:
Alignm length: 514
Alignm identity: 339
Alignm E-value: 4.99983e-42
Alignm gaps (pig, cow): 277, 71

Conread position: 24-564
Cow position:
Alignm length: 549
Alignm identity: 392
Alignm E-value: 0
Alignm gaps (pig, cow): 192, 69

Conread position: 25-564
Cow position:
Alignm length: 550
Alignm identity: 384
Alignm E-value: 0
Alignm gaps (pig, cow): 277, 59

Conread position: 29-335
Cow position:
Alignm length: 311
Alignm identity: 209
Alignm E-value: 7e-34
Alignm gaps (pig, cow): 139, 26

Conread position: 34-562
Cow position:
Alignm length: 537
Alignm identity: 361
Alignm E-value: 0
Alignm gaps (pig, cow): 37, 63

Conread position: 42-505
Cow position:
Alignm length: 475
Alignm identity: 311
Alignm E-value: 9.99995e-41
Alignm gaps (pig, cow): 32, 49

Conread position: 44-563
Cow position:
Alignm length: 528
Alignm identity: 381
Alignm E-value: 0
Alignm gaps (pig, cow): 258, 46

Conread position: 46-392
Cow position:
Alignm length: 356
Alignm identity: 238
Alignm E-value: 4e-39
Alignm gaps (pig, cow): 49, 232

Conread position: 52-427
Cow position:
Alignm length: 403
Alignm identity: 292
Alignm E-value: 0
Alignm gaps (pig, cow): 7, 34

Conread position: 73-561
Cow position:
Alignm length: 496
Alignm identity: 331
Alignm E-value: 0
Alignm gaps (pig, cow): 289, 17

Conread position: 73-563
Cow position:
Alignm length: 499
Alignm identity: 338
Alignm E-value: 0
Alignm gaps (pig, cow): 228, 146

Conread position: 75-565
Cow position:
Alignm length: 503
Alignm identity: 375
Alignm E-value: 0
Alignm gaps (pig, cow): 286, 20

Conread position: 83-549
Cow position:
Alignm length: 479
Alignm identity: 339
Alignm E-value: 0
Alignm gaps (pig, cow): 28, 194

Conread position: 88-413
Cow position:
Alignm length: 332
Alignm identity: 224
Alignm E-value: 4e-29
Alignm gaps (pig, cow): 72, 12

Conread position: 89-549
Cow position:
Alignm length: 473
Alignm identity: 310
Alignm E-value: 0
Alignm gaps (pig, cow): 43, 21

Conread position: 90-567
Cow position:
Alignm length: 488
Alignm identity: 361
Alignm E-value: 0
Alignm gaps (pig, cow): 212, 145

Conread position: 94-508
Cow position:
Alignm length: 423
Alignm identity: 278
Alignm E-value: 2e-33
Alignm gaps (pig, cow): 208, 104

Conread position: 94-567
Cow position:
Alignm length: 485
Alignm identity: 353
Alignm E-value: 0
Alignm gaps (pig, cow): 28, 186

Conread position: 120-564
Cow position:
Alignm length: 454
Alignm identity: 317
Alignm E-value: 0
Alignm gaps (pig, cow): 182, 48

Conread position: 121-513
Cow position:
Alignm length: 407
Alignm identity: 267
Alignm E-value: 3e-27
Alignm gaps (pig, cow): 240, 83

Conread position: 132-491
Cow position:
Alignm length: 371
Alignm identity: 274
Alignm E-value: 0
Alignm gaps (pig, cow): 170, 48

Conread position: 147-563
Cow position:
Alignm length: 431
Alignm identity: 290
Alignm E-value: 2e-35
Alignm gaps (pig, cow): 216, 76

Conread position: 160-282
Cow position:
Alignm length: 123
Alignm identity: 98
Alignm E-value: 2e-24
Alignm gaps (pig, cow): 83, 0

Conread position: 200-420
Cow position:
Alignm length: 232
Alignm identity: 164
Alignm E-value: 7e-24
Alignm gaps (pig, cow): 72, 150

Conread position: 200-563
Cow position:
Alignm length: 375
Alignm identity: 282
Alignm E-value: 0
Alignm gaps (pig, cow): 21, 37

Conread position: 218-562
Cow position:
Alignm length: 355
Alignm identity: 269
Alignm E-value: 0
Alignm gaps (pig, cow): 80, 127

Conread position: 239-549
Cow position:
Alignm length: 321
Alignm identity: 245
Alignm E-value: 0
Alignm gaps (pig, cow): 63, 40

Conread position: 239-552
Cow position:
Alignm length: 324
Alignm identity: 247
Alignm E-value: 0
Alignm gaps (pig, cow): 63, 12

Conread position: 243-421
Cow position:
Alignm length: 182
Alignm identity: 132
Alignm E-value: 7e-24
Alignm gaps (pig, cow): 119, 79

Conread position: 248-549
Cow position:
Alignm length: 310
Alignm identity: 240
Alignm E-value: 0
Alignm gaps (pig, cow): 54, 104

Conread position: 260-557
Cow position:
Alignm length: 312
Alignm identity: 202
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 42, 83

Conread position: 268-563
Cow position:
Alignm length: 309
Alignm identity: 225
Alignm E-value: 0
Alignm gaps (pig, cow): 34, 84

Conread position: 291-562
Cow position:
Alignm length: 279
Alignm identity: 196
Alignm E-value: 1e-28
Alignm gaps (pig, cow): 81, 21

Conread position: 292-560
Cow position:
Alignm length: 273
Alignm identity: 207
Alignm E-value: 0
Alignm gaps (pig, cow): 10, 60

Conread position: 325-562
Cow position:
Alignm length: 247
Alignm identity: 170
Alignm E-value: 5e-21
Alignm gaps (pig, cow): 37, 18

Conread position: 348-552
Cow position:
Alignm length: 214
Alignm identity: 166
Alignm E-value: 1e-37
Alignm gaps (pig, cow): 16, 60

Conread position: 387-564
Cow position:
Alignm length: 179
Alignm identity: 130
Alignm E-value: 7e-24
Alignm gaps (pig, cow): 84, 18

Conread position: 392-550
Cow position:
Alignm length: 163
Alignm identity: 120
Alignm E-value: 6e-22
Alignm gaps (pig, cow): 27, 53

Show alignments to all cow chromosomes.