Cow genome map

Conread name: Utr1-UTR010045E09

Conread position: 3-538
Cow position:
Alignm length: 550
Alignm identity: 359
Alignm E-value: 0
Alignm gaps (pig, cow): 16, 71

Conread position: 3-549
Cow position:
Alignm length: 556
Alignm identity: 410
Alignm E-value: 0
Alignm gaps (pig, cow): 299, 87

Conread position: 4-286
Cow position:
Alignm length: 284
Alignm identity: 201
Alignm E-value: 2e-35
Alignm gaps (pig, cow): 259, 15

Conread position: 5-300
Cow position:
Alignm length: 298
Alignm identity: 198
Alignm E-value: 4e-31
Alignm gaps (pig, cow): 216, 88

Conread position: 5-300
Cow position:
Alignm length: 296
Alignm identity: 221
Alignm E-value: 0
Alignm gaps (pig, cow): 85, 0

Conread position: 5-521
Cow position:
Alignm length: 529
Alignm identity: 391
Alignm E-value: 0
Alignm gaps (pig, cow): 278, 56

Conread position: 5-549
Cow position:
Alignm length: 561
Alignm identity: 403
Alignm E-value: 0
Alignm gaps (pig, cow): 127, 84

Conread position: 5-549
Cow position:
Alignm length: 555
Alignm identity: 416
Alignm E-value: 0
Alignm gaps (pig, cow): 293, 85

Conread position: 5-563
Cow position:
Alignm length: 569
Alignm identity: 428
Alignm E-value: 0
Alignm gaps (pig, cow): 90, 43

Conread position: 5-567
Cow position:
Alignm length: 572
Alignm identity: 422
Alignm E-value: 0
Alignm gaps (pig, cow): 356, 85

Conread position: 6-124
Cow position:
Alignm length: 119
Alignm identity: 97
Alignm E-value: 2e-25
Alignm gaps (pig, cow): 85, 0

Conread position: 6-144
Cow position:
Alignm length: 139
Alignm identity: 106
Alignm E-value: 2e-24
Alignm gaps (pig, cow): 83, 0

Conread position: 6-150
Cow position:
Alignm length: 146
Alignm identity: 116
Alignm E-value: 1e-28
Alignm gaps (pig, cow): 13, 86

Conread position: 6-183
Cow position:
Alignm length: 178
Alignm identity: 134
Alignm E-value: 5e-32
Alignm gaps (pig, cow): 84, 0

Conread position: 6-194
Cow position:
Alignm length: 189
Alignm identity: 140
Alignm E-value: 1e-29
Alignm gaps (pig, cow): 84, 0

Conread position: 6-213
Cow position:
Alignm length: 208
Alignm identity: 155
Alignm E-value: 8e-37
Alignm gaps (pig, cow): 29, 0

Conread position: 6-225
Cow position:
Alignm length: 220
Alignm identity: 167
Alignm E-value: 4.00001e-41
Alignm gaps (pig, cow): 50, 0

Conread position: 6-232
Cow position:
Alignm length: 227
Alignm identity: 170
Alignm E-value: 3e-39
Alignm gaps (pig, cow): 83, 0

Conread position: 6-232
Cow position:
Alignm length: 227
Alignm identity: 174
Alignm E-value: 0
Alignm gaps (pig, cow): 84, 0

Conread position: 6-277
Cow position:
Alignm length: 272
Alignm identity: 185
Alignm E-value: 4e-29
Alignm gaps (pig, cow): 72, 0

Conread position: 6-278
Cow position:
Alignm length: 273
Alignm identity: 202
Alignm E-value: 0
Alignm gaps (pig, cow): 83, 0

Conread position: 6-300
Cow position:
Alignm length: 295
Alignm identity: 227
Alignm E-value: 0
Alignm gaps (pig, cow): 90, 0

Conread position: 6-359
Cow position:
Alignm length: 354
Alignm identity: 170
Alignm E-value: 4.00001e-40
Alignm gaps (pig, cow): 83, 0

Conread position: 6-378
Cow position:
Alignm length: 374
Alignm identity: 275
Alignm E-value: 0
Alignm gaps (pig, cow): 30, 85

Conread position: 6-456
Cow position:
Alignm length: 458
Alignm identity: 354
Alignm E-value: 0
Alignm gaps (pig, cow): 296, 80

Conread position: 6-473
Cow position:
Alignm length: 477
Alignm identity: 354
Alignm E-value: 0
Alignm gaps (pig, cow): 306, 40

Conread position: 6-478
Cow position:
Alignm length: 484
Alignm identity: 360
Alignm E-value: 0
Alignm gaps (pig, cow): 165, 85

Conread position: 6-489
Cow position:
Alignm length: 494
Alignm identity: 376
Alignm E-value: 0
Alignm gaps (pig, cow): 293, 84

Conread position: 6-504
Cow position:
Alignm length: 503
Alignm identity: 379
Alignm E-value: 0
Alignm gaps (pig, cow): 88, 106

Conread position: 6-531
Cow position:
Alignm length: 536
Alignm identity: 414
Alignm E-value: 0
Alignm gaps (pig, cow): 120, 89

Conread position: 6-533
Cow position:
Alignm length: 543
Alignm identity: 401
Alignm E-value: 0
Alignm gaps (pig, cow): 135, 13

Conread position: 6-535
Cow position:
Alignm length: 542
Alignm identity: 401
Alignm E-value: 0
Alignm gaps (pig, cow): 296, 82

Conread position: 6-536
Cow position:
Alignm length: 539
Alignm identity: 411
Alignm E-value: 0
Alignm gaps (pig, cow): 296, 8

Conread position: 6-538
Cow position:
Alignm length: 540
Alignm identity: 408
Alignm E-value: 0
Alignm gaps (pig, cow): 293, 84

Conread position: 6-548
Cow position:
Alignm length: 574
Alignm identity: 422
Alignm E-value: 0
Alignm gaps (pig, cow): 86, 210

Conread position: 6-549
Cow position:
Alignm length: 553
Alignm identity: 413
Alignm E-value: 0
Alignm gaps (pig, cow): 296, 84

Conread position: 6-549
Cow position:
Alignm length: 551
Alignm identity: 409
Alignm E-value: 0
Alignm gaps (pig, cow): 357, 84

Conread position: 6-549
Cow position:
Alignm length: 554
Alignm identity: 419
Alignm E-value: 0
Alignm gaps (pig, cow): 292, 84

Conread position: 6-549
Cow position:
Alignm length: 554
Alignm identity: 412
Alignm E-value: 0
Alignm gaps (pig, cow): 292, 20

Conread position: 6-549
Cow position:
Alignm length: 553
Alignm identity: 417
Alignm E-value: 0
Alignm gaps (pig, cow): 296, 84

Conread position: 6-549
Cow position:
Alignm length: 554
Alignm identity: 431
Alignm E-value: 0
Alignm gaps (pig, cow): 293, 84

Conread position: 6-549
Cow position:
Alignm length: 554
Alignm identity: 429
Alignm E-value: 0
Alignm gaps (pig, cow): 293, 84

Conread position: 6-557
Cow position:
Alignm length: 562
Alignm identity: 427
Alignm E-value: 0
Alignm gaps (pig, cow): 293, 84

Conread position: 6-558
Cow position:
Alignm length: 561
Alignm identity: 422
Alignm E-value: 0
Alignm gaps (pig, cow): 45, 69

Conread position: 6-558
Cow position:
Alignm length: 564
Alignm identity: 400
Alignm E-value: 0
Alignm gaps (pig, cow): 38, 85

Conread position: 6-558
Cow position:
Alignm length: 562
Alignm identity: 415
Alignm E-value: 0
Alignm gaps (pig, cow): 250, 89

Conread position: 6-562
Cow position:
Alignm length: 568
Alignm identity: 434
Alignm E-value: 0
Alignm gaps (pig, cow): 13, 85

Conread position: 6-562
Cow position:
Alignm length: 567
Alignm identity: 424
Alignm E-value: 0
Alignm gaps (pig, cow): 355, 13

Conread position: 6-562
Cow position:
Alignm length: 567
Alignm identity: 429
Alignm E-value: 0
Alignm gaps (pig, cow): 293, 84

Conread position: 6-562
Cow position:
Alignm length: 578
Alignm identity: 424
Alignm E-value: 0
Alignm gaps (pig, cow): 292, 89

Conread position: 6-562
Cow position:
Alignm length: 564
Alignm identity: 416
Alignm E-value: 0
Alignm gaps (pig, cow): 296, 14

Conread position: 6-562
Cow position:
Alignm length: 570
Alignm identity: 428
Alignm E-value: 0
Alignm gaps (pig, cow): 86, 13

Conread position: 6-563
Cow position:
Alignm length: 568
Alignm identity: 416
Alignm E-value: 0
Alignm gaps (pig, cow): 292, 82

Conread position: 6-563
Cow position:
Alignm length: 568
Alignm identity: 424
Alignm E-value: 0
Alignm gaps (pig, cow): 293, 25

Conread position: 6-563
Cow position:
Alignm length: 570
Alignm identity: 420
Alignm E-value: 0
Alignm gaps (pig, cow): 97, 82

Conread position: 6-563
Cow position:
Alignm length: 565
Alignm identity: 413
Alignm E-value: 0
Alignm gaps (pig, cow): 255, 81

Conread position: 6-563
Cow position:
Alignm length: 568
Alignm identity: 421
Alignm E-value: 0
Alignm gaps (pig, cow): 296, 39

Conread position: 6-563
Cow position:
Alignm length: 569
Alignm identity: 405
Alignm E-value: 0
Alignm gaps (pig, cow): 121, 52

Conread position: 6-563
Cow position:
Alignm length: 587
Alignm identity: 424
Alignm E-value: 0
Alignm gaps (pig, cow): 222, 62

Conread position: 6-563
Cow position:
Alignm length: 568
Alignm identity: 424
Alignm E-value: 0
Alignm gaps (pig, cow): 293, 84

Conread position: 6-563
Cow position:
Alignm length: 570
Alignm identity: 432
Alignm E-value: 0
Alignm gaps (pig, cow): 274, 90

Conread position: 6-563
Cow position:
Alignm length: 567
Alignm identity: 412
Alignm E-value: 0
Alignm gaps (pig, cow): 143, 81

Conread position: 6-563
Cow position:
Alignm length: 565
Alignm identity: 406
Alignm E-value: 0
Alignm gaps (pig, cow): 98, 83

Conread position: 6-563
Cow position:
Alignm length: 569
Alignm identity: 435
Alignm E-value: 0
Alignm gaps (pig, cow): 293, 84

Conread position: 6-563
Cow position:
Alignm length: 572
Alignm identity: 428
Alignm E-value: 0
Alignm gaps (pig, cow): 239, 13

Conread position: 6-563
Cow position:
Alignm length: 568
Alignm identity: 427
Alignm E-value: 0
Alignm gaps (pig, cow): 296, 84

Conread position: 6-563
Cow position:
Alignm length: 568
Alignm identity: 424
Alignm E-value: 0
Alignm gaps (pig, cow): 293, 91

Conread position: 6-564
Cow position:
Alignm length: 570
Alignm identity: 416
Alignm E-value: 0
Alignm gaps (pig, cow): 268, 84

Conread position: 6-566
Cow position:
Alignm length: 572
Alignm identity: 423
Alignm E-value: 0
Alignm gaps (pig, cow): 293, 84

Conread position: 6-566
Cow position:
Alignm length: 572
Alignm identity: 421
Alignm E-value: 0
Alignm gaps (pig, cow): 293, 83

Conread position: 6-566
Cow position:
Alignm length: 571
Alignm identity: 419
Alignm E-value: 0
Alignm gaps (pig, cow): 296, 84

Conread position: 6-570
Cow position:
Alignm length: 577
Alignm identity: 424
Alignm E-value: 0
Alignm gaps (pig, cow): 292, 84

Conread position: 7-496
Cow position:
Alignm length: 499
Alignm identity: 368
Alignm E-value: 0
Alignm gaps (pig, cow): 292, 83

Conread position: 7-548
Cow position:
Alignm length: 558
Alignm identity: 364
Alignm E-value: 1.96182e-44
Alignm gaps (pig, cow): 143, 17

Conread position: 7-549
Cow position:
Alignm length: 553
Alignm identity: 418
Alignm E-value: 0
Alignm gaps (pig, cow): 295, 83

Conread position: 7-563
Cow position:
Alignm length: 566
Alignm identity: 418
Alignm E-value: 0
Alignm gaps (pig, cow): 292, 83

Conread position: 7-563
Cow position:
Alignm length: 567
Alignm identity: 430
Alignm E-value: 0
Alignm gaps (pig, cow): 295, 83

Conread position: 10-561
Cow position:
Alignm length: 565
Alignm identity: 430
Alignm E-value: 0
Alignm gaps (pig, cow): 277, 9

Conread position: 11-549
Cow position:
Alignm length: 558
Alignm identity: 405
Alignm E-value: 0
Alignm gaps (pig, cow): 235, 79

Conread position: 12-567
Cow position:
Alignm length: 566
Alignm identity: 422
Alignm E-value: 0
Alignm gaps (pig, cow): 290, 77

Conread position: 15-220
Cow position:
Alignm length: 206
Alignm identity: 150
Alignm E-value: 2e-34
Alignm gaps (pig, cow): 73, 0

Conread position: 15-297
Cow position:
Alignm length: 286
Alignm identity: 218
Alignm E-value: 0
Alignm gaps (pig, cow): 23, 78

Conread position: 15-316
Cow position:
Alignm length: 302
Alignm identity: 225
Alignm E-value: 0
Alignm gaps (pig, cow): 75, 0

Conread position: 15-556
Cow position:
Alignm length: 554
Alignm identity: 371
Alignm E-value: 0
Alignm gaps (pig, cow): 178, 76

Conread position: 19-564
Cow position:
Alignm length: 555
Alignm identity: 392
Alignm E-value: 0
Alignm gaps (pig, cow): 282, 72

Conread position: 20-300
Cow position:
Alignm length: 290
Alignm identity: 191
Alignm E-value: 6e-24
Alignm gaps (pig, cow): 72, 53

Conread position: 20-395
Cow position:
Alignm length: 382
Alignm identity: 274
Alignm E-value: 0
Alignm gaps (pig, cow): 46, 13

Conread position: 20-533
Cow position:
Alignm length: 523
Alignm identity: 392
Alignm E-value: 0
Alignm gaps (pig, cow): 282, 83

Conread position: 23-489
Cow position:
Alignm length: 477
Alignm identity: 323
Alignm E-value: 0
Alignm gaps (pig, cow): 99, 72

Conread position: 29-462
Cow position:
Alignm length: 441
Alignm identity: 297
Alignm E-value: 4.99983e-42
Alignm gaps (pig, cow): 167, 66

Conread position: 32-523
Cow position:
Alignm length: 497
Alignm identity: 362
Alignm E-value: 0
Alignm gaps (pig, cow): 33, 64

Conread position: 33-560
Cow position:
Alignm length: 535
Alignm identity: 405
Alignm E-value: 0
Alignm gaps (pig, cow): 72, 62

Conread position: 33-563
Cow position:
Alignm length: 545
Alignm identity: 401
Alignm E-value: 0
Alignm gaps (pig, cow): 196, 24

Conread position: 37-563
Cow position:
Alignm length: 537
Alignm identity: 407
Alignm E-value: 0
Alignm gaps (pig, cow): 262, 53

Conread position: 45-287
Cow position:
Alignm length: 243
Alignm identity: 194
Alignm E-value: 0
Alignm gaps (pig, cow): 50, 0

Conread position: 65-562
Cow position:
Alignm length: 504
Alignm identity: 384
Alignm E-value: 0
Alignm gaps (pig, cow): 30, 112

Conread position: 69-335
Cow position:
Alignm length: 268
Alignm identity: 179
Alignm E-value: 6e-23
Alignm gaps (pig, cow): 234, 19

Conread position: 75-563
Cow position:
Alignm length: 499
Alignm identity: 365
Alignm E-value: 0
Alignm gaps (pig, cow): 227, 270

Conread position: 89-260
Cow position:
Alignm length: 172
Alignm identity: 129
Alignm E-value: 1e-30
Alignm gaps (pig, cow): 120, 0

Conread position: 89-561
Cow position:
Alignm length: 488
Alignm identity: 329
Alignm E-value: 0
Alignm gaps (pig, cow): 207, 13

Conread position: 89-563
Cow position:
Alignm length: 485
Alignm identity: 365
Alignm E-value: 0
Alignm gaps (pig, cow): 209, 105

Conread position: 93-324
Cow position:
Alignm length: 234
Alignm identity: 171
Alignm E-value: 2e-33
Alignm gaps (pig, cow): 78, 85

Conread position: 94-322
Cow position:
Alignm length: 232
Alignm identity: 163
Alignm E-value: 5e-32
Alignm gaps (pig, cow): 204, 19

Conread position: 94-559
Cow position:
Alignm length: 472
Alignm identity: 338
Alignm E-value: 0
Alignm gaps (pig, cow): 95, 64

Conread position: 112-514
Cow position:
Alignm length: 410
Alignm identity: 253
Alignm E-value: 2e-23
Alignm gaps (pig, cow): 47, 65

Conread position: 112-562
Cow position:
Alignm length: 458
Alignm identity: 329
Alignm E-value: 0
Alignm gaps (pig, cow): 251, 65

Conread position: 116-379
Cow position:
Alignm length: 271
Alignm identity: 206
Alignm E-value: 0
Alignm gaps (pig, cow): 182, 231

Conread position: 116-563
Cow position:
Alignm length: 460
Alignm identity: 334
Alignm E-value: 0
Alignm gaps (pig, cow): 78, 83

Conread position: 117-564
Cow position:
Alignm length: 456
Alignm identity: 330
Alignm E-value: 0
Alignm gaps (pig, cow): 185, 150

Conread position: 118-523
Cow position:
Alignm length: 415
Alignm identity: 315
Alignm E-value: 0
Alignm gaps (pig, cow): 178, 151

Conread position: 120-550
Cow position:
Alignm length: 441
Alignm identity: 313
Alignm E-value: 0
Alignm gaps (pig, cow): 178, 103

Conread position: 128-562
Cow position:
Alignm length: 452
Alignm identity: 320
Alignm E-value: 0
Alignm gaps (pig, cow): 174, 160

Conread position: 149-567
Cow position:
Alignm length: 426
Alignm identity: 322
Alignm E-value: 0
Alignm gaps (pig, cow): 153, 47

Conread position: 183-564
Cow position:
Alignm length: 392
Alignm identity: 266
Alignm E-value: 3e-37
Alignm gaps (pig, cow): 119, 60

Conread position: 190-549
Cow position:
Alignm length: 370
Alignm identity: 288
Alignm E-value: 0
Alignm gaps (pig, cow): 108, 155

Conread position: 200-425
Cow position:
Alignm length: 233
Alignm identity: 165
Alignm E-value: 1e-27
Alignm gaps (pig, cow): 102, 43

Conread position: 200-558
Cow position:
Alignm length: 368
Alignm identity: 286
Alignm E-value: 0
Alignm gaps (pig, cow): 12, 146

Conread position: 222-563
Cow position:
Alignm length: 353
Alignm identity: 260
Alignm E-value: 0
Alignm gaps (pig, cow): 77, 123

Conread position: 223-536
Cow position:
Alignm length: 333
Alignm identity: 247
Alignm E-value: 0
Alignm gaps (pig, cow): 79, 129

Conread position: 224-539
Cow position:
Alignm length: 328
Alignm identity: 257
Alignm E-value: 0
Alignm gaps (pig, cow): 78, 122

Conread position: 244-564
Cow position:
Alignm length: 330
Alignm identity: 245
Alignm E-value: 0
Alignm gaps (pig, cow): 58, 101

Conread position: 259-547
Cow position:
Alignm length: 298
Alignm identity: 212
Alignm E-value: 2e-36
Alignm gaps (pig, cow): 104, 20

Conread position: 259-563
Cow position:
Alignm length: 315
Alignm identity: 220
Alignm E-value: 9e-38
Alignm gaps (pig, cow): 21, 31

Conread position: 284-561
Cow position:
Alignm length: 287
Alignm identity: 210
Alignm E-value: 4.99983e-42
Alignm gaps (pig, cow): 77, 13

Conread position: 285-562
Cow position:
Alignm length: 288
Alignm identity: 212
Alignm E-value: 6.02558e-44
Alignm gaps (pig, cow): 17, 60

Conread position: 292-548
Cow position:
Alignm length: 267
Alignm identity: 200
Alignm E-value: 5.00264e-43
Alignm gaps (pig, cow): 10, 60

Conread position: 298-562
Cow position:
Alignm length: 270
Alignm identity: 182
Alignm E-value: 3e-26
Alignm gaps (pig, cow): 10, 54

Conread position: 305-522
Cow position:
Alignm length: 227
Alignm identity: 164
Alignm E-value: 9e-27
Alignm gaps (pig, cow): 58, 24

Conread position: 354-563
Cow position:
Alignm length: 220
Alignm identity: 163
Alignm E-value: 5e-32
Alignm gaps (pig, cow): 7, 50

Conread position: 360-567
Cow position:
Alignm length: 214
Alignm identity: 161
Alignm E-value: 7e-35
Alignm gaps (pig, cow): 12, 46

Conread position: 377-564
Cow position:
Alignm length: 191
Alignm identity: 135
Alignm E-value: 2e-25
Alignm gaps (pig, cow): 39, 0

Conread position: 392-563
Cow position:
Alignm length: 177
Alignm identity: 126
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 34, 23

Conread position: 397-563
Cow position:
Alignm length: 173
Alignm identity: 125
Alignm E-value: 5e-21
Alignm gaps (pig, cow): 32, 8

Conread position: 409-564
Cow position:
Alignm length: 162
Alignm identity: 127
Alignm E-value: 4e-30
Alignm gaps (pig, cow): 27, 0

Conread position: 411-550
Cow position:
Alignm length: 147
Alignm identity: 111
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 21, 0

Conread position: 431-562
Cow position:
Alignm length: 133
Alignm identity: 101
Alignm E-value: 2e-22
Alignm gaps (pig, cow): 40, 0

Show alignments to all cow chromosomes.