Cow genome map

Conread name: Utr1-UTR010045E09

Conread position: 5-225
Cow position:
Alignm length: 221
Alignm identity: 166
Alignm E-value: 9.99967e-42
Alignm gaps (pig, cow): 84, 0

Conread position: 5-357
Cow position:
Alignm length: 354
Alignm identity: 255
Alignm E-value: 0
Alignm gaps (pig, cow): 293, 90

Conread position: 5-549
Cow position:
Alignm length: 567
Alignm identity: 418
Alignm E-value: 0
Alignm gaps (pig, cow): 297, 56

Conread position: 5-563
Cow position:
Alignm length: 569
Alignm identity: 429
Alignm E-value: 0
Alignm gaps (pig, cow): 297, 85

Conread position: 5-564
Cow position:
Alignm length: 568
Alignm identity: 362
Alignm E-value: 2e-33
Alignm gaps (pig, cow): 117, 90

Conread position: 5-564
Cow position:
Alignm length: 577
Alignm identity: 378
Alignm E-value: 6.02558e-44
Alignm gaps (pig, cow): 154, 17

Conread position: 5-564
Cow position:
Alignm length: 569
Alignm identity: 385
Alignm E-value: 0
Alignm gaps (pig, cow): 115, 85

Conread position: 5-564
Cow position:
Alignm length: 573
Alignm identity: 416
Alignm E-value: 0
Alignm gaps (pig, cow): 90, 16

Conread position: 6-129
Cow position:
Alignm length: 124
Alignm identity: 95
Alignm E-value: 5e-21
Alignm gaps (pig, cow): 83, 0

Conread position: 6-133
Cow position:
Alignm length: 128
Alignm identity: 101
Alignm E-value: 6e-24
Alignm gaps (pig, cow): 8, 0

Conread position: 6-144
Cow position:
Alignm length: 139
Alignm identity: 106
Alignm E-value: 2e-24
Alignm gaps (pig, cow): 83, 0

Conread position: 6-144
Cow position:
Alignm length: 139
Alignm identity: 105
Alignm E-value: 2e-23
Alignm gaps (pig, cow): 83, 0

Conread position: 6-173
Cow position:
Alignm length: 168
Alignm identity: 129
Alignm E-value: 2e-32
Alignm gaps (pig, cow): 83, 0

Conread position: 6-251
Cow position:
Alignm length: 247
Alignm identity: 182
Alignm E-value: 4.00001e-40
Alignm gaps (pig, cow): 56, 13

Conread position: 6-261
Cow position:
Alignm length: 256
Alignm identity: 199
Alignm E-value: 0
Alignm gaps (pig, cow): 84, 0

Conread position: 6-264
Cow position:
Alignm length: 268
Alignm identity: 200
Alignm E-value: 1.96182e-44
Alignm gaps (pig, cow): 133, 83

Conread position: 6-265
Cow position:
Alignm length: 262
Alignm identity: 193
Alignm E-value: 0
Alignm gaps (pig, cow): 216, 83

Conread position: 6-273
Cow position:
Alignm length: 275
Alignm identity: 184
Alignm E-value: 9e-27
Alignm gaps (pig, cow): 50, 18

Conread position: 6-294
Cow position:
Alignm length: 289
Alignm identity: 221
Alignm E-value: 0
Alignm gaps (pig, cow): 83, 0

Conread position: 6-296
Cow position:
Alignm length: 295
Alignm identity: 217
Alignm E-value: 0
Alignm gaps (pig, cow): 19, 88

Conread position: 6-305
Cow position:
Alignm length: 305
Alignm identity: 234
Alignm E-value: 0
Alignm gaps (pig, cow): 190, 94

Conread position: 6-318
Cow position:
Alignm length: 321
Alignm identity: 239
Alignm E-value: 0
Alignm gaps (pig, cow): 143, 84

Conread position: 6-318
Cow position:
Alignm length: 314
Alignm identity: 241
Alignm E-value: 0
Alignm gaps (pig, cow): 289, 89

Conread position: 6-371
Cow position:
Alignm length: 369
Alignm identity: 280
Alignm E-value: 0
Alignm gaps (pig, cow): 300, 90

Conread position: 6-374
Cow position:
Alignm length: 372
Alignm identity: 285
Alignm E-value: 0
Alignm gaps (pig, cow): 293, 84

Conread position: 6-424
Cow position:
Alignm length: 424
Alignm identity: 314
Alignm E-value: 0
Alignm gaps (pig, cow): 197, 64

Conread position: 6-457
Cow position:
Alignm length: 460
Alignm identity: 334
Alignm E-value: 0
Alignm gaps (pig, cow): 296, 84

Conread position: 6-469
Cow position:
Alignm length: 475
Alignm identity: 353
Alignm E-value: 0
Alignm gaps (pig, cow): 293, 84

Conread position: 6-493
Cow position:
Alignm length: 497
Alignm identity: 370
Alignm E-value: 0
Alignm gaps (pig, cow): 292, 84

Conread position: 6-496
Cow position:
Alignm length: 499
Alignm identity: 353
Alignm E-value: 0
Alignm gaps (pig, cow): 287, 84

Conread position: 6-503
Cow position:
Alignm length: 512
Alignm identity: 391
Alignm E-value: 0
Alignm gaps (pig, cow): 95, 40

Conread position: 6-508
Cow position:
Alignm length: 512
Alignm identity: 374
Alignm E-value: 0
Alignm gaps (pig, cow): 355, 83

Conread position: 6-524
Cow position:
Alignm length: 530
Alignm identity: 403
Alignm E-value: 0
Alignm gaps (pig, cow): 296, 84

Conread position: 6-529
Cow position:
Alignm length: 534
Alignm identity: 387
Alignm E-value: 0
Alignm gaps (pig, cow): 316, 82

Conread position: 6-536
Cow position:
Alignm length: 541
Alignm identity: 393
Alignm E-value: 0
Alignm gaps (pig, cow): 289, 42

Conread position: 6-536
Cow position:
Alignm length: 540
Alignm identity: 407
Alignm E-value: 0
Alignm gaps (pig, cow): 296, 84

Conread position: 6-538
Cow position:
Alignm length: 543
Alignm identity: 404
Alignm E-value: 0
Alignm gaps (pig, cow): 293, 84

Conread position: 6-549
Cow position:
Alignm length: 558
Alignm identity: 393
Alignm E-value: 0
Alignm gaps (pig, cow): 296, 83

Conread position: 6-549
Cow position:
Alignm length: 554
Alignm identity: 408
Alignm E-value: 0
Alignm gaps (pig, cow): 292, 84

Conread position: 6-549
Cow position:
Alignm length: 554
Alignm identity: 410
Alignm E-value: 0
Alignm gaps (pig, cow): 296, 84

Conread position: 6-549
Cow position:
Alignm length: 553
Alignm identity: 410
Alignm E-value: 0
Alignm gaps (pig, cow): 130, 84

Conread position: 6-549
Cow position:
Alignm length: 553
Alignm identity: 421
Alignm E-value: 0
Alignm gaps (pig, cow): 355, 84

Conread position: 6-549
Cow position:
Alignm length: 551
Alignm identity: 417
Alignm E-value: 0
Alignm gaps (pig, cow): 367, 84

Conread position: 6-550
Cow position:
Alignm length: 555
Alignm identity: 424
Alignm E-value: 0
Alignm gaps (pig, cow): 268, 84

Conread position: 6-557
Cow position:
Alignm length: 562
Alignm identity: 426
Alignm E-value: 0
Alignm gaps (pig, cow): 292, 84

Conread position: 6-560
Cow position:
Alignm length: 565
Alignm identity: 430
Alignm E-value: 0
Alignm gaps (pig, cow): 33, 90

Conread position: 6-561
Cow position:
Alignm length: 567
Alignm identity: 421
Alignm E-value: 0
Alignm gaps (pig, cow): 222, 84

Conread position: 6-562
Cow position:
Alignm length: 567
Alignm identity: 417
Alignm E-value: 0
Alignm gaps (pig, cow): 292, 84

Conread position: 6-562
Cow position:
Alignm length: 573
Alignm identity: 431
Alignm E-value: 0
Alignm gaps (pig, cow): 89, 352

Conread position: 6-562
Cow position:
Alignm length: 567
Alignm identity: 415
Alignm E-value: 0
Alignm gaps (pig, cow): 84, 272

Conread position: 6-562
Cow position:
Alignm length: 570
Alignm identity: 421
Alignm E-value: 0
Alignm gaps (pig, cow): 53, 85

Conread position: 6-562
Cow position:
Alignm length: 582
Alignm identity: 431
Alignm E-value: 0
Alignm gaps (pig, cow): 13, 196

Conread position: 6-563
Cow position:
Alignm length: 570
Alignm identity: 427
Alignm E-value: 0
Alignm gaps (pig, cow): 252, 39

Conread position: 6-563
Cow position:
Alignm length: 575
Alignm identity: 417
Alignm E-value: 0
Alignm gaps (pig, cow): 190, 44

Conread position: 6-563
Cow position:
Alignm length: 566
Alignm identity: 423
Alignm E-value: 0
Alignm gaps (pig, cow): 295, 84

Conread position: 6-563
Cow position:
Alignm length: 570
Alignm identity: 421
Alignm E-value: 0
Alignm gaps (pig, cow): 39, 34

Conread position: 6-563
Cow position:
Alignm length: 580
Alignm identity: 420
Alignm E-value: 0
Alignm gaps (pig, cow): 84, 359

Conread position: 6-563
Cow position:
Alignm length: 570
Alignm identity: 421
Alignm E-value: 0
Alignm gaps (pig, cow): 147, 62

Conread position: 6-563
Cow position:
Alignm length: 568
Alignm identity: 420
Alignm E-value: 0
Alignm gaps (pig, cow): 296, 84

Conread position: 6-563
Cow position:
Alignm length: 568
Alignm identity: 420
Alignm E-value: 0
Alignm gaps (pig, cow): 293, 78

Conread position: 6-563
Cow position:
Alignm length: 568
Alignm identity: 429
Alignm E-value: 0
Alignm gaps (pig, cow): 296, 90

Conread position: 6-563
Cow position:
Alignm length: 567
Alignm identity: 420
Alignm E-value: 0
Alignm gaps (pig, cow): 292, 9

Conread position: 6-563
Cow position:
Alignm length: 568
Alignm identity: 435
Alignm E-value: 0
Alignm gaps (pig, cow): 296, 84

Conread position: 6-563
Cow position:
Alignm length: 568
Alignm identity: 434
Alignm E-value: 0
Alignm gaps (pig, cow): 293, 84

Conread position: 6-563
Cow position:
Alignm length: 570
Alignm identity: 440
Alignm E-value: 0
Alignm gaps (pig, cow): 293, 84

Conread position: 6-563
Cow position:
Alignm length: 570
Alignm identity: 424
Alignm E-value: 0
Alignm gaps (pig, cow): 296, 70

Conread position: 6-563
Cow position:
Alignm length: 567
Alignm identity: 421
Alignm E-value: 0
Alignm gaps (pig, cow): 355, 19

Conread position: 6-563
Cow position:
Alignm length: 568
Alignm identity: 424
Alignm E-value: 0
Alignm gaps (pig, cow): 296, 84

Conread position: 6-563
Cow position:
Alignm length: 569
Alignm identity: 427
Alignm E-value: 0
Alignm gaps (pig, cow): 296, 64

Conread position: 6-564
Cow position:
Alignm length: 570
Alignm identity: 433
Alignm E-value: 0
Alignm gaps (pig, cow): 292, 84

Conread position: 6-566
Cow position:
Alignm length: 573
Alignm identity: 425
Alignm E-value: 0
Alignm gaps (pig, cow): 229, 84

Conread position: 6-567
Cow position:
Alignm length: 583
Alignm identity: 434
Alignm E-value: 0
Alignm gaps (pig, cow): 117, 83

Conread position: 6-567
Cow position:
Alignm length: 574
Alignm identity: 425
Alignm E-value: 0
Alignm gaps (pig, cow): 293, 84

Conread position: 6-570
Cow position:
Alignm length: 577
Alignm identity: 435
Alignm E-value: 0
Alignm gaps (pig, cow): 218, 83

Conread position: 7-293
Cow position:
Alignm length: 291
Alignm identity: 197
Alignm E-value: 5e-31
Alignm gaps (pig, cow): 85, 105

Conread position: 7-549
Cow position:
Alignm length: 554
Alignm identity: 417
Alignm E-value: 0
Alignm gaps (pig, cow): 267, 83

Conread position: 7-565
Cow position:
Alignm length: 593
Alignm identity: 369
Alignm E-value: 3e-26
Alignm gaps (pig, cow): 85, 94

Conread position: 8-518
Cow position:
Alignm length: 521
Alignm identity: 369
Alignm E-value: 0
Alignm gaps (pig, cow): 287, 32

Conread position: 8-562
Cow position:
Alignm length: 565
Alignm identity: 427
Alignm E-value: 0
Alignm gaps (pig, cow): 291, 82

Conread position: 10-261
Cow position:
Alignm length: 252
Alignm identity: 188
Alignm E-value: 0
Alignm gaps (pig, cow): 85, 0

Conread position: 10-273
Cow position:
Alignm length: 266
Alignm identity: 173
Alignm E-value: 6e-23
Alignm gaps (pig, cow): 80, 63

Conread position: 10-277
Cow position:
Alignm length: 272
Alignm identity: 197
Alignm E-value: 1e-39
Alignm gaps (pig, cow): 72, 36

Conread position: 10-423
Cow position:
Alignm length: 418
Alignm identity: 314
Alignm E-value: 0
Alignm gaps (pig, cow): 280, 85

Conread position: 10-538
Cow position:
Alignm length: 545
Alignm identity: 367
Alignm E-value: 0
Alignm gaps (pig, cow): 153, 47

Conread position: 10-549
Cow position:
Alignm length: 551
Alignm identity: 416
Alignm E-value: 0
Alignm gaps (pig, cow): 288, 80

Conread position: 10-560
Cow position:
Alignm length: 564
Alignm identity: 371
Alignm E-value: 0
Alignm gaps (pig, cow): 32, 7

Conread position: 10-563
Cow position:
Alignm length: 564
Alignm identity: 429
Alignm E-value: 0
Alignm gaps (pig, cow): 23, 83

Conread position: 12-536
Cow position:
Alignm length: 538
Alignm identity: 340
Alignm E-value: 9.99995e-41
Alignm gaps (pig, cow): 284, 92

Conread position: 15-413
Cow position:
Alignm length: 405
Alignm identity: 279
Alignm E-value: 0
Alignm gaps (pig, cow): 121, 76

Conread position: 15-522
Cow position:
Alignm length: 517
Alignm identity: 370
Alignm E-value: 0
Alignm gaps (pig, cow): 179, 59

Conread position: 20-213
Cow position:
Alignm length: 194
Alignm identity: 135
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 75, 0

Conread position: 20-454
Cow position:
Alignm length: 445
Alignm identity: 305
Alignm E-value: 0
Alignm gaps (pig, cow): 85, 71

Conread position: 29-562
Cow position:
Alignm length: 544
Alignm identity: 407
Alignm E-value: 0
Alignm gaps (pig, cow): 273, 55

Conread position: 29-564
Cow position:
Alignm length: 538
Alignm identity: 337
Alignm E-value: 3e-28
Alignm gaps (pig, cow): 267, 22

Conread position: 30-361
Cow position:
Alignm length: 337
Alignm identity: 254
Alignm E-value: 0
Alignm gaps (pig, cow): 130, 64

Conread position: 30-557
Cow position:
Alignm length: 532
Alignm identity: 415
Alignm E-value: 0
Alignm gaps (pig, cow): 331, 70

Conread position: 32-564
Cow position:
Alignm length: 543
Alignm identity: 395
Alignm E-value: 0
Alignm gaps (pig, cow): 262, 39

Conread position: 33-562
Cow position:
Alignm length: 540
Alignm identity: 407
Alignm E-value: 0
Alignm gaps (pig, cow): 265, 57

Conread position: 46-560
Cow position:
Alignm length: 528
Alignm identity: 346
Alignm E-value: 0
Alignm gaps (pig, cow): 250, 62

Conread position: 60-536
Cow position:
Alignm length: 482
Alignm identity: 336
Alignm E-value: 0
Alignm gaps (pig, cow): 10, 14

Conread position: 63-564
Cow position:
Alignm length: 513
Alignm identity: 361
Alignm E-value: 0
Alignm gaps (pig, cow): 20, 33

Conread position: 75-537
Cow position:
Alignm length: 473
Alignm identity: 363
Alignm E-value: 0
Alignm gaps (pig, cow): 227, 15

Conread position: 81-536
Cow position:
Alignm length: 468
Alignm identity: 287
Alignm E-value: 5e-22
Alignm gaps (pig, cow): 191, 14

Conread position: 89-403
Cow position:
Alignm length: 321
Alignm identity: 214
Alignm E-value: 4e-29
Alignm gaps (pig, cow): 74, 181

Conread position: 102-563
Cow position:
Alignm length: 468
Alignm identity: 356
Alignm E-value: 0
Alignm gaps (pig, cow): 94, 166

Conread position: 104-548
Cow position:
Alignm length: 455
Alignm identity: 344
Alignm E-value: 0
Alignm gaps (pig, cow): 9, 242

Conread position: 113-557
Cow position:
Alignm length: 468
Alignm identity: 341
Alignm E-value: 0
Alignm gaps (pig, cow): 12, 312

Conread position: 113-561
Cow position:
Alignm length: 459
Alignm identity: 343
Alignm E-value: 0
Alignm gaps (pig, cow): 189, 21

Conread position: 120-427
Cow position:
Alignm length: 317
Alignm identity: 217
Alignm E-value: 3e-27
Alignm gaps (pig, cow): 171, 78

Conread position: 134-561
Cow position:
Alignm length: 447
Alignm identity: 324
Alignm E-value: 0
Alignm gaps (pig, cow): 155, 64

Conread position: 146-549
Cow position:
Alignm length: 414
Alignm identity: 313
Alignm E-value: 0
Alignm gaps (pig, cow): 147, 199

Conread position: 156-564
Cow position:
Alignm length: 413
Alignm identity: 274
Alignm E-value: 5e-32
Alignm gaps (pig, cow): 151, 19

Conread position: 180-296
Cow position:
Alignm length: 117
Alignm identity: 92
Alignm E-value: 2e-22
Alignm gaps (pig, cow): 0, 0

Conread position: 220-508
Cow position:
Alignm length: 299
Alignm identity: 215
Alignm E-value: 4e-39
Alignm gaps (pig, cow): 140, 47

Conread position: 220-564
Cow position:
Alignm length: 356
Alignm identity: 255
Alignm E-value: 0
Alignm gaps (pig, cow): 82, 126

Conread position: 231-538
Cow position:
Alignm length: 316
Alignm identity: 207
Alignm E-value: 4e-30
Alignm gaps (pig, cow): 76, 112

Conread position: 232-517
Cow position:
Alignm length: 296
Alignm identity: 201
Alignm E-value: 4e-29
Alignm gaps (pig, cow): 61, 121

Conread position: 243-536
Cow position:
Alignm length: 304
Alignm identity: 212
Alignm E-value: 3e-38
Alignm gaps (pig, cow): 59, 101

Conread position: 248-413
Cow position:
Alignm length: 170
Alignm identity: 129
Alignm E-value: 3e-26
Alignm gaps (pig, cow): 54, 40

Conread position: 254-563
Cow position:
Alignm length: 320
Alignm identity: 243
Alignm E-value: 0
Alignm gaps (pig, cow): 48, 98

Conread position: 258-564
Cow position:
Alignm length: 317
Alignm identity: 240
Alignm E-value: 0
Alignm gaps (pig, cow): 45, 94

Conread position: 263-562
Cow position:
Alignm length: 310
Alignm identity: 234
Alignm E-value: 0
Alignm gaps (pig, cow): 39, 82

Conread position: 273-539
Cow position:
Alignm length: 271
Alignm identity: 201
Alignm E-value: 4.00001e-40
Alignm gaps (pig, cow): 29, 139

Conread position: 273-563
Cow position:
Alignm length: 298
Alignm identity: 206
Alignm E-value: 5e-32
Alignm gaps (pig, cow): 35, 81

Conread position: 282-519
Cow position:
Alignm length: 247
Alignm identity: 184
Alignm E-value: 3e-38
Alignm gaps (pig, cow): 82, 30

Conread position: 294-473
Cow position:
Alignm length: 191
Alignm identity: 148
Alignm E-value: 5e-31
Alignm gaps (pig, cow): 12, 58

Conread position: 297-562
Cow position:
Alignm length: 275
Alignm identity: 201
Alignm E-value: 4.99983e-42
Alignm gaps (pig, cow): 67, 54

Conread position: 314-567
Cow position:
Alignm length: 261
Alignm identity: 197
Alignm E-value: 2.00386e-43
Alignm gaps (pig, cow): 50, 37

Conread position: 322-558
Cow position:
Alignm length: 239
Alignm identity: 173
Alignm E-value: 3e-37
Alignm gaps (pig, cow): 50, 22

Conread position: 326-566
Cow position:
Alignm length: 252
Alignm identity: 193
Alignm E-value: 4.99983e-42
Alignm gaps (pig, cow): 38, 29

Conread position: 352-563
Cow position:
Alignm length: 219
Alignm identity: 158
Alignm E-value: 1e-29
Alignm gaps (pig, cow): 21, 62

Conread position: 358-564
Cow position:
Alignm length: 214
Alignm identity: 171
Alignm E-value: 6.02558e-44
Alignm gaps (pig, cow): 15, 57

Conread position: 363-562
Cow position:
Alignm length: 207
Alignm identity: 152
Alignm E-value: 4e-30
Alignm gaps (pig, cow): 9, 43

Conread position: 371-563
Cow position:
Alignm length: 197
Alignm identity: 141
Alignm E-value: 1e-27
Alignm gaps (pig, cow): 48, 0

Conread position: 386-567
Cow position:
Alignm length: 188
Alignm identity: 140
Alignm E-value: 1e-27
Alignm gaps (pig, cow): 38, 19

Conread position: 391-547
Cow position:
Alignm length: 163
Alignm identity: 124
Alignm E-value: 8e-26
Alignm gaps (pig, cow): 37, 16

Show alignments to all cow chromosomes.