Cow genome map
| Conread name: | Utr1-UTR010059E06 |
| Conread position: | 258-474 |
| Cow position: | chr16:25042807-25042589 (view UCSC Genome Browser custom track) |
| Alignm length: | 220 |
| Alignm identity: | 166 |
| Alignm E-value: | 9.99995e-41 |
| Alignm gaps (pig, cow): | 72, 179 |
| Conread position: | 259-475 |
| Cow position: | chr16:16149998-16150212 (view UCSC Genome Browser custom track) |
| Alignm length: | 217 |
| Alignm identity: | 150 |
| Alignm E-value: | 9e-29 |
| Alignm gaps (pig, cow): | 177, 0 |
| Conread position: | 259-475 |
| Cow position: | chr16:26990190-26990404 (view UCSC Genome Browser custom track) |
| Alignm length: | 217 |
| Alignm identity: | 157 |
| Alignm E-value: | 6e-35 |
| Alignm gaps (pig, cow): | 169, 0 |
| Conread position: | 259-475 |
| Cow position: | chr16:29093871-29093657 (view UCSC Genome Browser custom track) |
| Alignm length: | 218 |
| Alignm identity: | 173 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 178, 79 |
| Conread position: | 260-468 |
| Cow position: | chr16:55151079-55150874 (view UCSC Genome Browser custom track) |
| Alignm length: | 210 |
| Alignm identity: | 149 |
| Alignm E-value: | 3e-28 |
| Alignm gaps (pig, cow): | 141, 175 |
| Conread position: | 260-469 |
| Cow position: | chr16:45654832-45655039 (view UCSC Genome Browser custom track) |
| Alignm length: | 210 |
| Alignm identity: | 169 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 180, 0 |
| Conread position: | 260-471 |
| Cow position: | chr16:49742782-49742989 (view UCSC Genome Browser custom track) |
| Alignm length: | 212 |
| Alignm identity: | 154 |
| Alignm E-value: | 1e-32 |
| Alignm gaps (pig, cow): | 26, 0 |
| Conread position: | 260-473 |
| Cow position: | chr16:29539062-29539269 (view UCSC Genome Browser custom track) |
| Alignm length: | 214 |
| Alignm identity: | 153 |
| Alignm E-value: | 3e-30 |
| Alignm gaps (pig, cow): | 123, 0 |
| Conread position: | 260-473 |
| Cow position: | chr16:47367735-47367524 (view UCSC Genome Browser custom track) |
| Alignm length: | 214 |
| Alignm identity: | 174 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 174, 0 |
| Conread position: | 260-473 |
| Cow position: | chr16:50190369-50190576 (view UCSC Genome Browser custom track) |
| Alignm length: | 214 |
| Alignm identity: | 157 |
| Alignm E-value: | 2e-34 |
| Alignm gaps (pig, cow): | 72, 0 |
| Conread position: | 260-475 |
| Cow position: | chr16:702008-701797 (view UCSC Genome Browser custom track) |
| Alignm length: | 217 |
| Alignm identity: | 156 |
| Alignm E-value: | 4e-31 |
| Alignm gaps (pig, cow): | 86, 74 |
| Conread position: | 260-475 |
| Cow position: | chr16:1734488-1734274 (view UCSC Genome Browser custom track) |
| Alignm length: | 217 |
| Alignm identity: | 156 |
| Alignm E-value: | 5e-33 |
| Alignm gaps (pig, cow): | 132, 169 |
| Conread position: | 260-475 |
| Cow position: | chr16:18745291-18745494 (view UCSC Genome Browser custom track) |
| Alignm length: | 216 |
| Alignm identity: | 161 |
| Alignm E-value: | 5e-33 |
| Alignm gaps (pig, cow): | 47, 0 |
| Conread position: | 260-475 |
| Cow position: | chr16:30052694-30052484 (view UCSC Genome Browser custom track) |
| Alignm length: | 217 |
| Alignm identity: | 155 |
| Alignm E-value: | 1e-29 |
| Alignm gaps (pig, cow): | 114, 119 |
| Conread position: | 260-475 |
| Cow position: | chr16:44676103-44675889 (view UCSC Genome Browser custom track) |
| Alignm length: | 217 |
| Alignm identity: | 158 |
| Alignm E-value: | 2e-35 |
| Alignm gaps (pig, cow): | 78, 181 |
| Conread position: | 260-475 |
| Cow position: | chr16:45704049-45704259 (view UCSC Genome Browser custom track) |
| Alignm length: | 216 |
| Alignm identity: | 170 |
| Alignm E-value: | 1.4013e-45 |
| Alignm gaps (pig, cow): | 15, 0 |
| Conread position: | 260-475 |
| Cow position: | chr16:51400812-51401011 (view UCSC Genome Browser custom track) |
| Alignm length: | 216 |
| Alignm identity: | 157 |
| Alignm E-value: | 2e-24 |
| Alignm gaps (pig, cow): | 61, 0 |
| Conread position: | 261-475 |
| Cow position: | chr16:2305110-2304897 (view UCSC Genome Browser custom track) |
| Alignm length: | 216 |
| Alignm identity: | 166 |
| Alignm E-value: | 5.00264e-43 |
| Alignm gaps (pig, cow): | 20, 130 |
| Conread position: | 261-475 |
| Cow position: | chr16:12737028-12736816 (view UCSC Genome Browser custom track) |
| Alignm length: | 215 |
| Alignm identity: | 168 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 128, 0 |
| Conread position: | 261-475 |
| Cow position: | chr16:13601896-13602102 (view UCSC Genome Browser custom track) |
| Alignm length: | 218 |
| Alignm identity: | 163 |
| Alignm E-value: | 4e-31 |
| Alignm gaps (pig, cow): | 174, 15 |
| Conread position: | 261-475 |
| Cow position: | chr16:27013145-27012938 (view UCSC Genome Browser custom track) |
| Alignm length: | 215 |
| Alignm identity: | 173 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 157, 0 |
| Conread position: | 261-475 |
| Cow position: | chr16:45560041-45559829 (view UCSC Genome Browser custom track) |
| Alignm length: | 215 |
| Alignm identity: | 169 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 167, 0 |
| Conread position: | 261-475 |
| Cow position: | chr16:53612549-53612339 (view UCSC Genome Browser custom track) |
| Alignm length: | 215 |
| Alignm identity: | 160 |
| Alignm E-value: | 8e-38 |
| Alignm gaps (pig, cow): | 80, 0 |
| Conread position: | 263-475 |
| Cow position: | chr16:51087529-51087319 (view UCSC Genome Browser custom track) |
| Alignm length: | 214 |
| Alignm identity: | 169 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 14, 22 |
| Conread position: | 272-468 |
| Cow position: | chr16:20201810-20201614 (view UCSC Genome Browser custom track) |
| Alignm length: | 198 |
| Alignm identity: | 158 |
| Alignm E-value: | 5.60519e-45 |
| Alignm gaps (pig, cow): | 40, 163 |
| Conread position: | 273-475 |
| Cow position: | chr16:18426142-18425940 (view UCSC Genome Browser custom track) |
| Alignm length: | 203 |
| Alignm identity: | 156 |
| Alignm E-value: | 1.00053e-42 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 273-475 |
| Cow position: | chr16:43770419-43770615 (view UCSC Genome Browser custom track) |
| Alignm length: | 205 |
| Alignm identity: | 159 |
| Alignm E-value: | 7e-37 |
| Alignm gaps (pig, cow): | 30, 125 |
| Conread position: | 279-475 |
| Cow position: | chr16:20634491-20634678 (view UCSC Genome Browser custom track) |
| Alignm length: | 197 |
| Alignm identity: | 144 |
| Alignm E-value: | 3e-27 |
| Alignm gaps (pig, cow): | 47, 0 |
| Conread position: | 284-475 |
| Cow position: | chr16:658675-658496 (view UCSC Genome Browser custom track) |
| Alignm length: | 192 |
| Alignm identity: | 139 |
| Alignm E-value: | 2e-23 |
| Alignm gaps (pig, cow): | 54, 0 |
| Conread position: | 284-475 |
| Cow position: | chr16:5525374-5525563 (view UCSC Genome Browser custom track) |
| Alignm length: | 192 |
| Alignm identity: | 142 |
| Alignm E-value: | 1e-32 |
| Alignm gaps (pig, cow): | 144, 0 |
| Conread position: | 284-475 |
| Cow position: | chr16:14040150-14039961 (view UCSC Genome Browser custom track) |
| Alignm length: | 193 |
| Alignm identity: | 145 |
| Alignm E-value: | 5e-33 |
| Alignm gaps (pig, cow): | 67, 57 |
| Conread position: | 284-475 |
| Cow position: | chr16:18975593-18975404 (view UCSC Genome Browser custom track) |
| Alignm length: | 192 |
| Alignm identity: | 146 |
| Alignm E-value: | 2e-36 |
| Alignm gaps (pig, cow): | 144, 0 |
| Conread position: | 284-475 |
| Cow position: | chr16:22798979-22799168 (view UCSC Genome Browser custom track) |
| Alignm length: | 192 |
| Alignm identity: | 144 |
| Alignm E-value: | 2e-34 |
| Alignm gaps (pig, cow): | 144, 0 |
| Conread position: | 284-475 |
| Cow position: | chr16:45534187-45533998 (view UCSC Genome Browser custom track) |
| Alignm length: | 192 |
| Alignm identity: | 156 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 150, 0 |
| Conread position: | 284-475 |
| Cow position: | chr16:50712714-50712903 (view UCSC Genome Browser custom track) |
| Alignm length: | 192 |
| Alignm identity: | 147 |
| Alignm E-value: | 2e-37 |
| Alignm gaps (pig, cow): | 144, 0 |
| Conread position: | 287-475 |
| Cow position: | chr16:2233004-2233190 (view UCSC Genome Browser custom track) |
| Alignm length: | 189 |
| Alignm identity: | 139 |
| Alignm E-value: | 4e-31 |
| Alignm gaps (pig, cow): | 141, 0 |
| Conread position: | 288-475 |
| Cow position: | chr16:7457265-7457446 (view UCSC Genome Browser custom track) |
| Alignm length: | 188 |
| Alignm identity: | 145 |
| Alignm E-value: | 6e-35 |
| Alignm gaps (pig, cow): | 47, 0 |
| Conread position: | 299-475 |
| Cow position: | chr16:5763548-5763378 (view UCSC Genome Browser custom track) |
| Alignm length: | 177 |
| Alignm identity: | 138 |
| Alignm E-value: | 2e-33 |
| Alignm gaps (pig, cow): | 97, 0 |
| Conread position: | 316-475 |
| Cow position: | chr16:37486562-37486721 (view UCSC Genome Browser custom track) |
| Alignm length: | 161 |
| Alignm identity: | 130 |
| Alignm E-value: | 6e-36 |
| Alignm gaps (pig, cow): | 12, 119 |
| Conread position: | 324-475 |
| Cow position: | chr16:51041228-51041083 (view UCSC Genome Browser custom track) |
| Alignm length: | 152 |
| Alignm identity: | 112 |
| Alignm E-value: | 4e-21 |
| Alignm gaps (pig, cow): | 59, 0 |
Show alignments to all cow chromosomes.