Cow genome map
| Conread name: | Utr1-UTR010059E06 |
| Conread position: | 188-475 |
| Cow position: | chr3:66736136-66736422 (view UCSC Genome Browser custom track) |
| Alignm length: | 294 |
| Alignm identity: | 214 |
| Alignm E-value: | 7.9874e-44 |
| Alignm gaps (pig, cow): | 29, 21 |
| Conread position: | 258-475 |
| Cow position: | chr3:2432290-2432503 (view UCSC Genome Browser custom track) |
| Alignm length: | 218 |
| Alignm identity: | 158 |
| Alignm E-value: | 8e-34 |
| Alignm gaps (pig, cow): | 79, 0 |
| Conread position: | 259-465 |
| Cow position: | chr3:24638769-24638576 (view UCSC Genome Browser custom track) |
| Alignm length: | 207 |
| Alignm identity: | 152 |
| Alignm E-value: | 4e-28 |
| Alignm gaps (pig, cow): | 66, 0 |
| Conread position: | 259-475 |
| Cow position: | chr3:29573764-29573976 (view UCSC Genome Browser custom track) |
| Alignm length: | 217 |
| Alignm identity: | 157 |
| Alignm E-value: | 2e-33 |
| Alignm gaps (pig, cow): | 39, 0 |
| Conread position: | 259-475 |
| Cow position: | chr3:30351639-30351425 (view UCSC Genome Browser custom track) |
| Alignm length: | 217 |
| Alignm identity: | 154 |
| Alignm E-value: | 6e-32 |
| Alignm gaps (pig, cow): | 169, 0 |
| Conread position: | 259-475 |
| Cow position: | chr3:36121539-36121325 (view UCSC Genome Browser custom track) |
| Alignm length: | 217 |
| Alignm identity: | 162 |
| Alignm E-value: | 1e-39 |
| Alignm gaps (pig, cow): | 169, 0 |
| Conread position: | 259-475 |
| Cow position: | chr3:64654032-64653818 (view UCSC Genome Browser custom track) |
| Alignm length: | 217 |
| Alignm identity: | 159 |
| Alignm E-value: | 1e-36 |
| Alignm gaps (pig, cow): | 169, 0 |
| Conread position: | 260-471 |
| Cow position: | chr3:42500425-42500226 (view UCSC Genome Browser custom track) |
| Alignm length: | 212 |
| Alignm identity: | 160 |
| Alignm E-value: | 2e-33 |
| Alignm gaps (pig, cow): | 54, 0 |
| Conread position: | 260-475 |
| Cow position: | chr3:12676277-12676492 (view UCSC Genome Browser custom track) |
| Alignm length: | 220 |
| Alignm identity: | 163 |
| Alignm E-value: | 9e-35 |
| Alignm gaps (pig, cow): | 51, 32 |
| Conread position: | 260-475 |
| Cow position: | chr3:15655953-15656161 (view UCSC Genome Browser custom track) |
| Alignm length: | 217 |
| Alignm identity: | 171 |
| Alignm E-value: | 7.00649e-43 |
| Alignm gaps (pig, cow): | 152, 98 |
| Conread position: | 260-475 |
| Cow position: | chr3:22352976-22352767 (view UCSC Genome Browser custom track) |
| Alignm length: | 216 |
| Alignm identity: | 172 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 164, 0 |
| Conread position: | 260-475 |
| Cow position: | chr3:23010718-23010501 (view UCSC Genome Browser custom track) |
| Alignm length: | 221 |
| Alignm identity: | 159 |
| Alignm E-value: | 2e-30 |
| Alignm gaps (pig, cow): | 131, 124 |
| Conread position: | 260-475 |
| Cow position: | chr3:27454574-27454783 (view UCSC Genome Browser custom track) |
| Alignm length: | 216 |
| Alignm identity: | 169 |
| Alignm E-value: | 7.9874e-44 |
| Alignm gaps (pig, cow): | 123, 0 |
| Conread position: | 260-475 |
| Cow position: | chr3:37451464-37451250 (view UCSC Genome Browser custom track) |
| Alignm length: | 217 |
| Alignm identity: | 176 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 91, 175 |
| Conread position: | 260-475 |
| Cow position: | chr3:45184625-45184835 (view UCSC Genome Browser custom track) |
| Alignm length: | 216 |
| Alignm identity: | 163 |
| Alignm E-value: | 4e-39 |
| Alignm gaps (pig, cow): | 35, 0 |
| Conread position: | 260-475 |
| Cow position: | chr3:49732434-49732646 (view UCSC Genome Browser custom track) |
| Alignm length: | 217 |
| Alignm identity: | 163 |
| Alignm E-value: | 1e-37 |
| Alignm gaps (pig, cow): | 122, 98 |
| Conread position: | 260-475 |
| Cow position: | chr3:50347170-50346965 (view UCSC Genome Browser custom track) |
| Alignm length: | 216 |
| Alignm identity: | 163 |
| Alignm E-value: | 9e-35 |
| Alignm gaps (pig, cow): | 123, 0 |
| Conread position: | 260-475 |
| Cow position: | chr3:54653812-54654025 (view UCSC Genome Browser custom track) |
| Alignm length: | 216 |
| Alignm identity: | 158 |
| Alignm E-value: | 3e-36 |
| Alignm gaps (pig, cow): | 168, 0 |
| Conread position: | 260-475 |
| Cow position: | chr3:58950822-58950611 (view UCSC Genome Browser custom track) |
| Alignm length: | 216 |
| Alignm identity: | 160 |
| Alignm E-value: | 3e-36 |
| Alignm gaps (pig, cow): | 27, 0 |
| Conread position: | 260-475 |
| Cow position: | chr3:60184808-60185023 (view UCSC Genome Browser custom track) |
| Alignm length: | 218 |
| Alignm identity: | 161 |
| Alignm E-value: | 3e-36 |
| Alignm gaps (pig, cow): | 66, 165 |
| Conread position: | 260-475 |
| Cow position: | chr3:84199131-84198932 (view UCSC Genome Browser custom track) |
| Alignm length: | 216 |
| Alignm identity: | 162 |
| Alignm E-value: | 6e-31 |
| Alignm gaps (pig, cow): | 38, 0 |
| Conread position: | 261-473 |
| Cow position: | chr3:49429408-49429602 (view UCSC Genome Browser custom track) |
| Alignm length: | 213 |
| Alignm identity: | 165 |
| Alignm E-value: | 2e-33 |
| Alignm gaps (pig, cow): | 13, 0 |
| Conread position: | 261-475 |
| Cow position: | chr3:15988301-15988089 (view UCSC Genome Browser custom track) |
| Alignm length: | 215 |
| Alignm identity: | 170 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 173, 0 |
| Conread position: | 261-475 |
| Cow position: | chr3:28435337-28435549 (view UCSC Genome Browser custom track) |
| Alignm length: | 215 |
| Alignm identity: | 157 |
| Alignm E-value: | 1e-35 |
| Alignm gaps (pig, cow): | 167, 0 |
| Conread position: | 261-475 |
| Cow position: | chr3:31933976-31934189 (view UCSC Genome Browser custom track) |
| Alignm length: | 215 |
| Alignm identity: | 172 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 173, 0 |
| Conread position: | 261-475 |
| Cow position: | chr3:70913907-70914113 (view UCSC Genome Browser custom track) |
| Alignm length: | 215 |
| Alignm identity: | 165 |
| Alignm E-value: | 1e-39 |
| Alignm gaps (pig, cow): | 14, 0 |
| Conread position: | 262-475 |
| Cow position: | chr3:8391716-8391515 (view UCSC Genome Browser custom track) |
| Alignm length: | 214 |
| Alignm identity: | 163 |
| Alignm E-value: | 1e-35 |
| Alignm gaps (pig, cow): | 74, 0 |
| Conread position: | 263-475 |
| Cow position: | chr3:36671258-36671470 (view UCSC Genome Browser custom track) |
| Alignm length: | 214 |
| Alignm identity: | 157 |
| Alignm E-value: | 3e-36 |
| Alignm gaps (pig, cow): | 157, 172 |
| Conread position: | 263-475 |
| Cow position: | chr3:58766503-58766293 (view UCSC Genome Browser custom track) |
| Alignm length: | 213 |
| Alignm identity: | 158 |
| Alignm E-value: | 1e-37 |
| Alignm gaps (pig, cow): | 163, 0 |
| Conread position: | 263-475 |
| Cow position: | chr3:64281961-64282166 (view UCSC Genome Browser custom track) |
| Alignm length: | 214 |
| Alignm identity: | 160 |
| Alignm E-value: | 3e-34 |
| Alignm gaps (pig, cow): | 155, 64 |
| Conread position: | 272-475 |
| Cow position: | chr3:34557027-34557220 (view UCSC Genome Browser custom track) |
| Alignm length: | 204 |
| Alignm identity: | 162 |
| Alignm E-value: | 4.99997e-41 |
| Alignm gaps (pig, cow): | 95, 0 |
| Conread position: | 274-475 |
| Cow position: | chr3:31224624-31224428 (view UCSC Genome Browser custom track) |
| Alignm length: | 202 |
| Alignm identity: | 154 |
| Alignm E-value: | 4e-37 |
| Alignm gaps (pig, cow): | 123, 0 |
| Conread position: | 275-475 |
| Cow position: | chr3:78024088-78024286 (view UCSC Genome Browser custom track) |
| Alignm length: | 201 |
| Alignm identity: | 145 |
| Alignm E-value: | 6e-31 |
| Alignm gaps (pig, cow): | 153, 0 |
| Conread position: | 278-473 |
| Cow position: | chr3:48240600-48240404 (view UCSC Genome Browser custom track) |
| Alignm length: | 200 |
| Alignm identity: | 152 |
| Alignm E-value: | 3e-34 |
| Alignm gaps (pig, cow): | 10, 5 |
| Conread position: | 283-475 |
| Cow position: | chr3:46006431-46006253 (view UCSC Genome Browser custom track) |
| Alignm length: | 193 |
| Alignm identity: | 145 |
| Alignm E-value: | 4e-28 |
| Alignm gaps (pig, cow): | 49, 0 |
| Conread position: | 284-475 |
| Cow position: | chr3:47986778-47986589 (view UCSC Genome Browser custom track) |
| Alignm length: | 192 |
| Alignm identity: | 143 |
| Alignm E-value: | 2e-33 |
| Alignm gaps (pig, cow): | 144, 0 |
| Conread position: | 284-475 |
| Cow position: | chr3:48273117-48272931 (view UCSC Genome Browser custom track) |
| Alignm length: | 192 |
| Alignm identity: | 142 |
| Alignm E-value: | 2e-30 |
| Alignm gaps (pig, cow): | 113, 0 |
| Conread position: | 284-475 |
| Cow position: | chr3:64655547-64655360 (view UCSC Genome Browser custom track) |
| Alignm length: | 192 |
| Alignm identity: | 142 |
| Alignm E-value: | 6e-31 |
| Alignm gaps (pig, cow): | 105, 0 |
| Conread position: | 284-475 |
| Cow position: | chr3:69271940-69271751 (view UCSC Genome Browser custom track) |
| Alignm length: | 192 |
| Alignm identity: | 142 |
| Alignm E-value: | 2e-32 |
| Alignm gaps (pig, cow): | 144, 0 |
| Conread position: | 286-473 |
| Cow position: | chr3:14724451-14724271 (view UCSC Genome Browser custom track) |
| Alignm length: | 188 |
| Alignm identity: | 148 |
| Alignm E-value: | 3e-36 |
| Alignm gaps (pig, cow): | 12, 0 |
| Conread position: | 294-474 |
| Cow position: | chr3:63238707-63238879 (view UCSC Genome Browser custom track) |
| Alignm length: | 181 |
| Alignm identity: | 145 |
| Alignm E-value: | 4e-37 |
| Alignm gaps (pig, cow): | 89, 0 |
| Conread position: | 297-475 |
| Cow position: | chr3:64318072-64317899 (view UCSC Genome Browser custom track) |
| Alignm length: | 179 |
| Alignm identity: | 145 |
| Alignm E-value: | 1e-38 |
| Alignm gaps (pig, cow): | 24, 0 |
| Conread position: | 314-475 |
| Cow position: | chr3:18759114-18759271 (view UCSC Genome Browser custom track) |
| Alignm length: | 162 |
| Alignm identity: | 130 |
| Alignm E-value: | 3e-34 |
| Alignm gaps (pig, cow): | 13, 0 |
| Conread position: | 316-475 |
| Cow position: | chr3:49463253-49463410 (view UCSC Genome Browser custom track) |
| Alignm length: | 160 |
| Alignm identity: | 120 |
| Alignm E-value: | 1e-26 |
| Alignm gaps (pig, cow): | 112, 0 |
| Conread position: | 319-475 |
| Cow position: | chr3:7481203-7481352 (view UCSC Genome Browser custom track) |
| Alignm length: | 158 |
| Alignm identity: | 118 |
| Alignm E-value: | 2e-21 |
| Alignm gaps (pig, cow): | 46, 78 |
| Conread position: | 321-475 |
| Cow position: | chr3:6854325-6854477 (view UCSC Genome Browser custom track) |
| Alignm length: | 155 |
| Alignm identity: | 121 |
| Alignm E-value: | 2e-30 |
| Alignm gaps (pig, cow): | 125, 0 |
| Conread position: | 321-475 |
| Cow position: | chr3:40285017-40285166 (view UCSC Genome Browser custom track) |
| Alignm length: | 155 |
| Alignm identity: | 120 |
| Alignm E-value: | 3e-26 |
| Alignm gaps (pig, cow): | 62, 0 |
| Conread position: | 345-476 |
| Cow position: | chr3:36571415-36571289 (view UCSC Genome Browser custom track) |
| Alignm length: | 132 |
| Alignm identity: | 104 |
| Alignm E-value: | 7e-23 |
| Alignm gaps (pig, cow): | 76, 0 |
Show alignments to all cow chromosomes.