Cow genome map
| Conread name: | Utr1-UTR010059E06 |
| Conread position: | 259-475 |
| Cow position: | chr4:1007061-1006848 (view UCSC Genome Browser custom track) |
| Alignm length: | 217 |
| Alignm identity: | 160 |
| Alignm E-value: | 9e-37 |
| Alignm gaps (pig, cow): | 113, 0 |
| Conread position: | 260-468 |
| Cow position: | chr4:48496845-48496639 (view UCSC Genome Browser custom track) |
| Alignm length: | 210 |
| Alignm identity: | 166 |
| Alignm E-value: | 1.4013e-45 |
| Alignm gaps (pig, cow): | 153, 165 |
| Conread position: | 260-475 |
| Cow position: | chr4:2601372-2601166 (view UCSC Genome Browser custom track) |
| Alignm length: | 216 |
| Alignm identity: | 159 |
| Alignm E-value: | 6e-33 |
| Alignm gaps (pig, cow): | 30, 0 |
| Conread position: | 260-475 |
| Cow position: | chr4:7214608-7214822 (view UCSC Genome Browser custom track) |
| Alignm length: | 217 |
| Alignm identity: | 155 |
| Alignm E-value: | 2e-32 |
| Alignm gaps (pig, cow): | 113, 175 |
| Conread position: | 260-475 |
| Cow position: | chr4:8673890-8673693 (view UCSC Genome Browser custom track) |
| Alignm length: | 216 |
| Alignm identity: | 162 |
| Alignm E-value: | 2e-31 |
| Alignm gaps (pig, cow): | 75, 0 |
| Conread position: | 260-475 |
| Cow position: | chr4:12841114-12840896 (view UCSC Genome Browser custom track) |
| Alignm length: | 224 |
| Alignm identity: | 183 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 27, 41 |
| Conread position: | 260-475 |
| Cow position: | chr4:17833678-17833885 (view UCSC Genome Browser custom track) |
| Alignm length: | 216 |
| Alignm identity: | 161 |
| Alignm E-value: | 8e-36 |
| Alignm gaps (pig, cow): | 123, 0 |
| Conread position: | 260-475 |
| Cow position: | chr4:33181118-33181333 (view UCSC Genome Browser custom track) |
| Alignm length: | 217 |
| Alignm identity: | 169 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 88, 81 |
| Conread position: | 260-475 |
| Cow position: | chr4:37786467-37786257 (view UCSC Genome Browser custom track) |
| Alignm length: | 216 |
| Alignm identity: | 172 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 13, 0 |
| Conread position: | 260-475 |
| Cow position: | chr4:39457837-39457615 (view UCSC Genome Browser custom track) |
| Alignm length: | 226 |
| Alignm identity: | 171 |
| Alignm E-value: | 3e-38 |
| Alignm gaps (pig, cow): | 98, 139 |
| Conread position: | 260-475 |
| Cow position: | chr4:44733787-44733577 (view UCSC Genome Browser custom track) |
| Alignm length: | 217 |
| Alignm identity: | 150 |
| Alignm E-value: | 7e-24 |
| Alignm gaps (pig, cow): | 149, 123 |
| Conread position: | 260-475 |
| Cow position: | chr4:55509687-55509902 (view UCSC Genome Browser custom track) |
| Alignm length: | 218 |
| Alignm identity: | 173 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 203, 176 |
| Conread position: | 260-475 |
| Cow position: | chr4:58688731-58688941 (view UCSC Genome Browser custom track) |
| Alignm length: | 220 |
| Alignm identity: | 164 |
| Alignm E-value: | 2e-33 |
| Alignm gaps (pig, cow): | 178, 49 |
| Conread position: | 260-475 |
| Cow position: | chr4:65431438-65431236 (view UCSC Genome Browser custom track) |
| Alignm length: | 216 |
| Alignm identity: | 163 |
| Alignm E-value: | 2e-33 |
| Alignm gaps (pig, cow): | 59, 0 |
| Conread position: | 260-475 |
| Cow position: | chr4:65581687-65581470 (view UCSC Genome Browser custom track) |
| Alignm length: | 220 |
| Alignm identity: | 166 |
| Alignm E-value: | 1e-39 |
| Alignm gaps (pig, cow): | 78, 185 |
| Conread position: | 260-475 |
| Cow position: | chr4:68880685-68880468 (view UCSC Genome Browser custom track) |
| Alignm length: | 221 |
| Alignm identity: | 172 |
| Alignm E-value: | 5.99756e-43 |
| Alignm gaps (pig, cow): | 105, 173 |
| Conread position: | 260-476 |
| Cow position: | chr4:52086324-52086111 (view UCSC Genome Browser custom track) |
| Alignm length: | 217 |
| Alignm identity: | 170 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 168, 0 |
| Conread position: | 261-471 |
| Cow position: | chr4:45499338-45499141 (view UCSC Genome Browser custom track) |
| Alignm length: | 211 |
| Alignm identity: | 161 |
| Alignm E-value: | 2e-34 |
| Alignm gaps (pig, cow): | 37, 0 |
| Conread position: | 261-475 |
| Cow position: | chr4:32933-33138 (view UCSC Genome Browser custom track) |
| Alignm length: | 215 |
| Alignm identity: | 161 |
| Alignm E-value: | 7e-35 |
| Alignm gaps (pig, cow): | 59, 0 |
| Conread position: | 261-475 |
| Cow position: | chr4:36754951-36754740 (view UCSC Genome Browser custom track) |
| Alignm length: | 215 |
| Alignm identity: | 175 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 38, 0 |
| Conread position: | 261-475 |
| Cow position: | chr4:68795872-68795669 (view UCSC Genome Browser custom track) |
| Alignm length: | 216 |
| Alignm identity: | 160 |
| Alignm E-value: | 2e-32 |
| Alignm gaps (pig, cow): | 13, 160 |
| Conread position: | 262-475 |
| Cow position: | chr4:6631140-6631353 (view UCSC Genome Browser custom track) |
| Alignm length: | 214 |
| Alignm identity: | 147 |
| Alignm E-value: | 1e-28 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 263-475 |
| Cow position: | chr4:65890946-65890748 (view UCSC Genome Browser custom track) |
| Alignm length: | 213 |
| Alignm identity: | 157 |
| Alignm E-value: | 1e-29 |
| Alignm gaps (pig, cow): | 59, 0 |
| Conread position: | 264-471 |
| Cow position: | chr4:19237231-19237026 (view UCSC Genome Browser custom track) |
| Alignm length: | 208 |
| Alignm identity: | 158 |
| Alignm E-value: | 9.99995e-41 |
| Alignm gaps (pig, cow): | 172, 0 |
| Conread position: | 264-475 |
| Cow position: | chr4:19264832-19264635 (view UCSC Genome Browser custom track) |
| Alignm length: | 212 |
| Alignm identity: | 155 |
| Alignm E-value: | 1e-27 |
| Alignm gaps (pig, cow): | 63, 0 |
| Conread position: | 264-475 |
| Cow position: | chr4:54973214-54973005 (view UCSC Genome Browser custom track) |
| Alignm length: | 212 |
| Alignm identity: | 152 |
| Alignm E-value: | 2e-32 |
| Alignm gaps (pig, cow): | 164, 0 |
| Conread position: | 265-475 |
| Cow position: | chr4:21843357-21843565 (view UCSC Genome Browser custom track) |
| Alignm length: | 211 |
| Alignm identity: | 149 |
| Alignm E-value: | 4e-30 |
| Alignm gaps (pig, cow): | 163, 0 |
| Conread position: | 265-475 |
| Cow position: | chr4:46530090-46530290 (view UCSC Genome Browser custom track) |
| Alignm length: | 211 |
| Alignm identity: | 151 |
| Alignm E-value: | 1e-27 |
| Alignm gaps (pig, cow): | 66, 0 |
| Conread position: | 272-475 |
| Cow position: | chr4:25192728-25192922 (view UCSC Genome Browser custom track) |
| Alignm length: | 204 |
| Alignm identity: | 153 |
| Alignm E-value: | 2e-33 |
| Alignm gaps (pig, cow): | 59, 0 |
| Conread position: | 273-475 |
| Cow position: | chr4:36812174-36811976 (view UCSC Genome Browser custom track) |
| Alignm length: | 203 |
| Alignm identity: | 161 |
| Alignm E-value: | 7.00649e-45 |
| Alignm gaps (pig, cow): | 164, 0 |
| Conread position: | 274-475 |
| Cow position: | chr4:26745669-26745473 (view UCSC Genome Browser custom track) |
| Alignm length: | 202 |
| Alignm identity: | 150 |
| Alignm E-value: | 6e-33 |
| Alignm gaps (pig, cow): | 45, 0 |
| Conread position: | 281-475 |
| Cow position: | chr4:35868341-35868149 (view UCSC Genome Browser custom track) |
| Alignm length: | 195 |
| Alignm identity: | 165 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 161, 0 |
| Conread position: | 283-475 |
| Cow position: | chr4:11193102-11192910 (view UCSC Genome Browser custom track) |
| Alignm length: | 202 |
| Alignm identity: | 149 |
| Alignm E-value: | 6e-23 |
| Alignm gaps (pig, cow): | 49, 31 |
| Conread position: | 284-475 |
| Cow position: | chr4:10553386-10553200 (view UCSC Genome Browser custom track) |
| Alignm length: | 192 |
| Alignm identity: | 140 |
| Alignm E-value: | 3e-28 |
| Alignm gaps (pig, cow): | 48, 0 |
| Conread position: | 284-475 |
| Cow position: | chr4:38153156-38153349 (view UCSC Genome Browser custom track) |
| Alignm length: | 194 |
| Alignm identity: | 143 |
| Alignm E-value: | 2e-32 |
| Alignm gaps (pig, cow): | 149, 0 |
| Conread position: | 284-475 |
| Cow position: | chr4:60651737-60651548 (view UCSC Genome Browser custom track) |
| Alignm length: | 195 |
| Alignm identity: | 145 |
| Alignm E-value: | 4e-29 |
| Alignm gaps (pig, cow): | 50, 23 |
| Conread position: | 285-474 |
| Cow position: | chr4:41037969-41037784 (view UCSC Genome Browser custom track) |
| Alignm length: | 190 |
| Alignm identity: | 143 |
| Alignm E-value: | 6e-33 |
| Alignm gaps (pig, cow): | 75, 0 |
| Conread position: | 299-469 |
| Cow position: | chr4:66670059-66670222 (view UCSC Genome Browser custom track) |
| Alignm length: | 172 |
| Alignm identity: | 136 |
| Alignm E-value: | 5e-32 |
| Alignm gaps (pig, cow): | 97, 61 |
| Conread position: | 299-475 |
| Cow position: | chr4:10822743-10822913 (view UCSC Genome Browser custom track) |
| Alignm length: | 177 |
| Alignm identity: | 129 |
| Alignm E-value: | 7e-25 |
| Alignm gaps (pig, cow): | 33, 0 |
| Conread position: | 299-475 |
| Cow position: | chr4:27996902-27996731 (view UCSC Genome Browser custom track) |
| Alignm length: | 177 |
| Alignm identity: | 133 |
| Alignm E-value: | 4e-29 |
| Alignm gaps (pig, cow): | 36, 0 |
| Conread position: | 312-475 |
| Cow position: | chr4:61625451-61625611 (view UCSC Genome Browser custom track) |
| Alignm length: | 164 |
| Alignm identity: | 136 |
| Alignm E-value: | 1e-39 |
| Alignm gaps (pig, cow): | 19, 0 |
| Conread position: | 327-473 |
| Cow position: | chr4:14142409-14142264 (view UCSC Genome Browser custom track) |
| Alignm length: | 148 |
| Alignm identity: | 118 |
| Alignm E-value: | 1e-29 |
| Alignm gaps (pig, cow): | 60, 102 |
| Conread position: | 343-473 |
| Cow position: | chr4:18107433-18107307 (view UCSC Genome Browser custom track) |
| Alignm length: | 132 |
| Alignm identity: | 105 |
| Alignm E-value: | 2e-23 |
| Alignm gaps (pig, cow): | 44, 11 |
| Conread position: | 345-475 |
| Cow position: | chr4:25353923-25354051 (view UCSC Genome Browser custom track) |
| Alignm length: | 131 |
| Alignm identity: | 102 |
| Alignm E-value: | 2e-23 |
| Alignm gaps (pig, cow): | 83, 0 |
| Conread position: | 366-475 |
| Cow position: | chr4:19107990-19108097 (view UCSC Genome Browser custom track) |
| Alignm length: | 110 |
| Alignm identity: | 89 |
| Alignm E-value: | 5e-21 |
| Alignm gaps (pig, cow): | 62, 0 |
Show alignments to all cow chromosomes.