Cow genome map
| Conread name: | Utr1-UTR010059E06 |
| Conread position: | 259-475 |
| Cow position: | chr5:58192184-58191973 (view UCSC Genome Browser custom track) |
| Alignm length: | 218 |
| Alignm identity: | 154 |
| Alignm E-value: | 3e-27 |
| Alignm gaps (pig, cow): | 11, 17 |
| Conread position: | 259-475 |
| Cow position: | chr5:76098761-76098975 (view UCSC Genome Browser custom track) |
| Alignm length: | 217 |
| Alignm identity: | 158 |
| Alignm E-value: | 9e-36 |
| Alignm gaps (pig, cow): | 169, 0 |
| Conread position: | 260-465 |
| Cow position: | chr5:45941730-45941926 (view UCSC Genome Browser custom track) |
| Alignm length: | 206 |
| Alignm identity: | 165 |
| Alignm E-value: | 5.99756e-43 |
| Alignm gaps (pig, cow): | 100, 0 |
| Conread position: | 260-471 |
| Cow position: | chr5:64845000-64845208 (view UCSC Genome Browser custom track) |
| Alignm length: | 213 |
| Alignm identity: | 166 |
| Alignm E-value: | 5.99756e-43 |
| Alignm gaps (pig, cow): | 112, 66 |
| Conread position: | 260-473 |
| Cow position: | chr5:47855095-47854884 (view UCSC Genome Browser custom track) |
| Alignm length: | 214 |
| Alignm identity: | 170 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 182, 0 |
| Conread position: | 260-474 |
| Cow position: | chr5:58461425-58461643 (view UCSC Genome Browser custom track) |
| Alignm length: | 222 |
| Alignm identity: | 157 |
| Alignm E-value: | 3e-27 |
| Alignm gaps (pig, cow): | 130, 104 |
| Conread position: | 260-475 |
| Cow position: | chr5:8529913-8529706 (view UCSC Genome Browser custom track) |
| Alignm length: | 216 |
| Alignm identity: | 164 |
| Alignm E-value: | 1e-37 |
| Alignm gaps (pig, cow): | 39, 0 |
| Conread position: | 260-475 |
| Cow position: | chr5:24643606-24643815 (view UCSC Genome Browser custom track) |
| Alignm length: | 217 |
| Alignm identity: | 165 |
| Alignm E-value: | 4e-39 |
| Alignm gaps (pig, cow): | 43, 72 |
| Conread position: | 260-475 |
| Cow position: | chr5:31634704-31634493 (view UCSC Genome Browser custom track) |
| Alignm length: | 219 |
| Alignm identity: | 163 |
| Alignm E-value: | 7e-34 |
| Alignm gaps (pig, cow): | 42, 81 |
| Conread position: | 260-475 |
| Cow position: | chr5:32697524-32697747 (view UCSC Genome Browser custom track) |
| Alignm length: | 229 |
| Alignm identity: | 165 |
| Alignm E-value: | 8e-25 |
| Alignm gaps (pig, cow): | 36, 15 |
| Conread position: | 260-475 |
| Cow position: | chr5:41603547-41603336 (view UCSC Genome Browser custom track) |
| Alignm length: | 216 |
| Alignm identity: | 175 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 18, 0 |
| Conread position: | 260-475 |
| Cow position: | chr5:42676511-42676302 (view UCSC Genome Browser custom track) |
| Alignm length: | 216 |
| Alignm identity: | 158 |
| Alignm E-value: | 7e-34 |
| Alignm gaps (pig, cow): | 123, 0 |
| Conread position: | 260-475 |
| Cow position: | chr5:46797168-46796963 (view UCSC Genome Browser custom track) |
| Alignm length: | 216 |
| Alignm identity: | 165 |
| Alignm E-value: | 1e-38 |
| Alignm gaps (pig, cow): | 109, 0 |
| Conread position: | 260-475 |
| Cow position: | chr5:51684349-51684566 (view UCSC Genome Browser custom track) |
| Alignm length: | 222 |
| Alignm identity: | 152 |
| Alignm E-value: | 5e-21 |
| Alignm gaps (pig, cow): | 23, 28 |
| Conread position: | 260-475 |
| Cow position: | chr5:55088122-55087908 (view UCSC Genome Browser custom track) |
| Alignm length: | 217 |
| Alignm identity: | 168 |
| Alignm E-value: | 7.00649e-45 |
| Alignm gaps (pig, cow): | 122, 181 |
| Conread position: | 260-475 |
| Cow position: | chr5:56442525-56442314 (view UCSC Genome Browser custom track) |
| Alignm length: | 216 |
| Alignm identity: | 159 |
| Alignm E-value: | 3e-35 |
| Alignm gaps (pig, cow): | 35, 0 |
| Conread position: | 260-475 |
| Cow position: | chr5:64778733-64778947 (view UCSC Genome Browser custom track) |
| Alignm length: | 217 |
| Alignm identity: | 156 |
| Alignm E-value: | 6e-33 |
| Alignm gaps (pig, cow): | 105, 169 |
| Conread position: | 261-475 |
| Cow position: | chr5:23648163-23648374 (view UCSC Genome Browser custom track) |
| Alignm length: | 216 |
| Alignm identity: | 155 |
| Alignm E-value: | 2e-31 |
| Alignm gaps (pig, cow): | 113, 43 |
| Conread position: | 262-459 |
| Cow position: | chr5:1344625-1344824 (view UCSC Genome Browser custom track) |
| Alignm length: | 202 |
| Alignm identity: | 159 |
| Alignm E-value: | 1.99993e-41 |
| Alignm gaps (pig, cow): | 132, 37 |
| Conread position: | 263-475 |
| Cow position: | chr5:15761105-15761315 (view UCSC Genome Browser custom track) |
| Alignm length: | 213 |
| Alignm identity: | 151 |
| Alignm E-value: | 5e-31 |
| Alignm gaps (pig, cow): | 165, 0 |
| Conread position: | 266-475 |
| Cow position: | chr5:6180801-6180591 (view UCSC Genome Browser custom track) |
| Alignm length: | 217 |
| Alignm identity: | 164 |
| Alignm E-value: | 2e-34 |
| Alignm gaps (pig, cow): | 123, 33 |
| Conread position: | 270-475 |
| Cow position: | chr5:59782502-59782707 (view UCSC Genome Browser custom track) |
| Alignm length: | 208 |
| Alignm identity: | 159 |
| Alignm E-value: | 4e-39 |
| Alignm gaps (pig, cow): | 6, 160 |
| Conread position: | 272-475 |
| Cow position: | chr5:29558848-29558652 (view UCSC Genome Browser custom track) |
| Alignm length: | 205 |
| Alignm identity: | 168 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 55, 143 |
| Conread position: | 276-475 |
| Cow position: | chr5:41391983-41391784 (view UCSC Genome Browser custom track) |
| Alignm length: | 203 |
| Alignm identity: | 151 |
| Alignm E-value: | 6e-32 |
| Alignm gaps (pig, cow): | 41, 152 |
| Conread position: | 278-475 |
| Cow position: | chr5:29769310-29769115 (view UCSC Genome Browser custom track) |
| Alignm length: | 198 |
| Alignm identity: | 150 |
| Alignm E-value: | 1e-37 |
| Alignm gaps (pig, cow): | 156, 0 |
| Conread position: | 278-475 |
| Cow position: | chr5:41228799-41228992 (view UCSC Genome Browser custom track) |
| Alignm length: | 198 |
| Alignm identity: | 161 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 66, 0 |
| Conread position: | 283-475 |
| Cow position: | chr5:4348754-4348933 (view UCSC Genome Browser custom track) |
| Alignm length: | 194 |
| Alignm identity: | 142 |
| Alignm E-value: | 2e-24 |
| Alignm gaps (pig, cow): | 131, 43 |
| Conread position: | 284-475 |
| Cow position: | chr5:14551357-14551546 (view UCSC Genome Browser custom track) |
| Alignm length: | 193 |
| Alignm identity: | 148 |
| Alignm E-value: | 3e-36 |
| Alignm gaps (pig, cow): | 48, 53 |
| Conread position: | 284-475 |
| Cow position: | chr5:51746462-51746279 (view UCSC Genome Browser custom track) |
| Alignm length: | 192 |
| Alignm identity: | 142 |
| Alignm E-value: | 1e-27 |
| Alignm gaps (pig, cow): | 99, 0 |
| Conread position: | 287-475 |
| Cow position: | chr5:12133834-12133648 (view UCSC Genome Browser custom track) |
| Alignm length: | 189 |
| Alignm identity: | 138 |
| Alignm E-value: | 5e-30 |
| Alignm gaps (pig, cow): | 141, 0 |
| Conread position: | 287-475 |
| Cow position: | chr5:39363113-39362927 (view UCSC Genome Browser custom track) |
| Alignm length: | 189 |
| Alignm identity: | 143 |
| Alignm E-value: | 8e-35 |
| Alignm gaps (pig, cow): | 141, 0 |
| Conread position: | 299-475 |
| Cow position: | chr5:40357714-40357889 (view UCSC Genome Browser custom track) |
| Alignm length: | 178 |
| Alignm identity: | 142 |
| Alignm E-value: | 1e-38 |
| Alignm gaps (pig, cow): | 109, 142 |
| Conread position: | 310-475 |
| Cow position: | chr5:47696986-47697151 (view UCSC Genome Browser custom track) |
| Alignm length: | 169 |
| Alignm identity: | 134 |
| Alignm E-value: | 6e-33 |
| Alignm gaps (pig, cow): | 15, 98 |
| Conread position: | 333-471 |
| Cow position: | chr5:65597620-65597488 (view UCSC Genome Browser custom track) |
| Alignm length: | 139 |
| Alignm identity: | 109 |
| Alignm E-value: | 7e-23 |
| Alignm gaps (pig, cow): | 50, 0 |
| Conread position: | 343-473 |
| Cow position: | chr5:69771247-69771118 (view UCSC Genome Browser custom track) |
| Alignm length: | 131 |
| Alignm identity: | 109 |
| Alignm E-value: | 5e-31 |
| Alignm gaps (pig, cow): | 91, 0 |
| Conread position: | 366-475 |
| Cow position: | chr5:50604192-50604299 (view UCSC Genome Browser custom track) |
| Alignm length: | 110 |
| Alignm identity: | 89 |
| Alignm E-value: | 2e-21 |
| Alignm gaps (pig, cow): | 68, 0 |
Show alignments to all cow chromosomes.