Cow genome map
| Conread name: | Utr1-UTR010059E06 |
| Conread position: | 240-475 |
| Cow position: | chrX:32329472-32329240 (view UCSC Genome Browser custom track) |
| Alignm length: | 236 |
| Alignm identity: | 138 |
| Alignm E-value: | 3e-31 |
| Alignm gaps (pig, cow): | 137, 0 |
| Conread position: | 259-475 |
| Cow position: | chrX:11146088-11146302 (view UCSC Genome Browser custom track) |
| Alignm length: | 217 |
| Alignm identity: | 154 |
| Alignm E-value: | 4e-32 |
| Alignm gaps (pig, cow): | 169, 0 |
| Conread position: | 259-475 |
| Cow position: | chrX:16465546-16465338 (view UCSC Genome Browser custom track) |
| Alignm length: | 217 |
| Alignm identity: | 152 |
| Alignm E-value: | 6e-26 |
| Alignm gaps (pig, cow): | 147, 0 |
| Conread position: | 259-475 |
| Cow position: | chrX:21793836-21793621 (view UCSC Genome Browser custom track) |
| Alignm length: | 218 |
| Alignm identity: | 155 |
| Alignm E-value: | 1e-31 |
| Alignm gaps (pig, cow): | 45, 170 |
| Conread position: | 260-465 |
| Cow position: | chrX:40365501-40365705 (view UCSC Genome Browser custom track) |
| Alignm length: | 206 |
| Alignm identity: | 171 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 174, 0 |
| Conread position: | 260-471 |
| Cow position: | chrX:34222009-34221789 (view UCSC Genome Browser custom track) |
| Alignm length: | 221 |
| Alignm identity: | 168 |
| Alignm E-value: | 3e-39 |
| Alignm gaps (pig, cow): | 136, 0 |
| Conread position: | 260-474 |
| Cow position: | chrX:21255023-21254811 (view UCSC Genome Browser custom track) |
| Alignm length: | 215 |
| Alignm identity: | 158 |
| Alignm E-value: | 2e-37 |
| Alignm gaps (pig, cow): | 176, 0 |
| Conread position: | 260-475 |
| Cow position: | chrX:2300125-2299917 (view UCSC Genome Browser custom track) |
| Alignm length: | 216 |
| Alignm identity: | 170 |
| Alignm E-value: | 5.60519e-45 |
| Alignm gaps (pig, cow): | 14, 0 |
| Conread position: | 260-475 |
| Cow position: | chrX:4767934-4767727 (view UCSC Genome Browser custom track) |
| Alignm length: | 216 |
| Alignm identity: | 159 |
| Alignm E-value: | 1e-33 |
| Alignm gaps (pig, cow): | 71, 0 |
| Conread position: | 260-475 |
| Cow position: | chrX:6655792-6655987 (view UCSC Genome Browser custom track) |
| Alignm length: | 216 |
| Alignm identity: | 168 |
| Alignm E-value: | 2e-36 |
| Alignm gaps (pig, cow): | 66, 0 |
| Conread position: | 260-475 |
| Cow position: | chrX:10412731-10412944 (view UCSC Genome Browser custom track) |
| Alignm length: | 216 |
| Alignm identity: | 164 |
| Alignm E-value: | 3.00018e-42 |
| Alignm gaps (pig, cow): | 166, 0 |
| Conread position: | 260-475 |
| Cow position: | chrX:20675112-20674899 (view UCSC Genome Browser custom track) |
| Alignm length: | 216 |
| Alignm identity: | 166 |
| Alignm E-value: | 4.06377e-44 |
| Alignm gaps (pig, cow): | 168, 0 |
| Conread position: | 260-475 |
| Cow position: | chrX:27754672-27754459 (view UCSC Genome Browser custom track) |
| Alignm length: | 216 |
| Alignm identity: | 156 |
| Alignm E-value: | 2e-34 |
| Alignm gaps (pig, cow): | 168, 0 |
| Conread position: | 260-475 |
| Cow position: | chrX:28624517-28624729 (view UCSC Genome Browser custom track) |
| Alignm length: | 216 |
| Alignm identity: | 160 |
| Alignm E-value: | 2e-37 |
| Alignm gaps (pig, cow): | 98, 0 |
| Conread position: | 260-475 |
| Cow position: | chrX:31261389-31261602 (view UCSC Genome Browser custom track) |
| Alignm length: | 217 |
| Alignm identity: | 170 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 84, 22 |
| Conread position: | 260-475 |
| Cow position: | chrX:31728707-31728498 (view UCSC Genome Browser custom track) |
| Alignm length: | 216 |
| Alignm identity: | 170 |
| Alignm E-value: | 9.80909e-45 |
| Alignm gaps (pig, cow): | 67, 0 |
| Conread position: | 260-475 |
| Cow position: | chrX:39559119-39559322 (view UCSC Genome Browser custom track) |
| Alignm length: | 216 |
| Alignm identity: | 154 |
| Alignm E-value: | 2e-26 |
| Alignm gaps (pig, cow): | 66, 0 |
| Conread position: | 260-475 |
| Cow position: | chrX:42222529-42222738 (view UCSC Genome Browser custom track) |
| Alignm length: | 216 |
| Alignm identity: | 157 |
| Alignm E-value: | 1e-32 |
| Alignm gaps (pig, cow): | 154, 0 |
| Conread position: | 260-477 |
| Cow position: | chrX:2008459-2008669 (view UCSC Genome Browser custom track) |
| Alignm length: | 218 |
| Alignm identity: | 163 |
| Alignm E-value: | 2e-37 |
| Alignm gaps (pig, cow): | 67, 0 |
| Conread position: | 261-475 |
| Cow position: | chrX:40693486-40693701 (view UCSC Genome Browser custom track) |
| Alignm length: | 219 |
| Alignm identity: | 172 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 133, 177 |
| Conread position: | 262-472 |
| Cow position: | chrX:23415453-23415661 (view UCSC Genome Browser custom track) |
| Alignm length: | 211 |
| Alignm identity: | 178 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 170, 0 |
| Conread position: | 262-475 |
| Cow position: | chrX:2382710-2382497 (view UCSC Genome Browser custom track) |
| Alignm length: | 215 |
| Alignm identity: | 162 |
| Alignm E-value: | 8.99998e-41 |
| Alignm gaps (pig, cow): | 75, 173 |
| Conread position: | 262-475 |
| Cow position: | chrX:38228074-38228286 (view UCSC Genome Browser custom track) |
| Alignm length: | 215 |
| Alignm identity: | 157 |
| Alignm E-value: | 2e-35 |
| Alignm gaps (pig, cow): | 57, 179 |
| Conread position: | 263-475 |
| Cow position: | chrX:43075124-43074914 (view UCSC Genome Browser custom track) |
| Alignm length: | 213 |
| Alignm identity: | 163 |
| Alignm E-value: | 3.9937e-43 |
| Alignm gaps (pig, cow): | 171, 0 |
| Conread position: | 264-475 |
| Cow position: | chrX:4407123-4406914 (view UCSC Genome Browser custom track) |
| Alignm length: | 212 |
| Alignm identity: | 163 |
| Alignm E-value: | 3.9937e-43 |
| Alignm gaps (pig, cow): | 162, 0 |
| Conread position: | 282-475 |
| Cow position: | chrX:29700721-29700912 (view UCSC Genome Browser custom track) |
| Alignm length: | 194 |
| Alignm identity: | 154 |
| Alignm E-value: | 9.94922e-44 |
| Alignm gaps (pig, cow): | 152, 0 |
| Conread position: | 283-475 |
| Cow position: | chrX:16035293-16035477 (view UCSC Genome Browser custom track) |
| Alignm length: | 194 |
| Alignm identity: | 138 |
| Alignm E-value: | 1e-23 |
| Alignm gaps (pig, cow): | 136, 84 |
| Conread position: | 283-475 |
| Cow position: | chrX:37832245-37832423 (view UCSC Genome Browser custom track) |
| Alignm length: | 193 |
| Alignm identity: | 145 |
| Alignm E-value: | 7e-28 |
| Alignm gaps (pig, cow): | 77, 0 |
| Conread position: | 284-475 |
| Cow position: | chrX:8482667-8482478 (view UCSC Genome Browser custom track) |
| Alignm length: | 192 |
| Alignm identity: | 140 |
| Alignm E-value: | 1e-30 |
| Alignm gaps (pig, cow): | 144, 0 |
| Conread position: | 284-475 |
| Cow position: | chrX:22819298-22819109 (view UCSC Genome Browser custom track) |
| Alignm length: | 192 |
| Alignm identity: | 155 |
| Alignm E-value: | 5.60519e-45 |
| Alignm gaps (pig, cow): | 144, 0 |
| Conread position: | 284-475 |
| Cow position: | chrX:23986470-23986281 (view UCSC Genome Browser custom track) |
| Alignm length: | 192 |
| Alignm identity: | 146 |
| Alignm E-value: | 2e-36 |
| Alignm gaps (pig, cow): | 144, 0 |
| Conread position: | 284-475 |
| Cow position: | chrX:29083287-29083098 (view UCSC Genome Browser custom track) |
| Alignm length: | 192 |
| Alignm identity: | 142 |
| Alignm E-value: | 1e-32 |
| Alignm gaps (pig, cow): | 144, 0 |
| Conread position: | 284-475 |
| Cow position: | chrX:38231047-38231236 (view UCSC Genome Browser custom track) |
| Alignm length: | 192 |
| Alignm identity: | 141 |
| Alignm E-value: | 4e-32 |
| Alignm gaps (pig, cow): | 156, 0 |
| Conread position: | 284-475 |
| Cow position: | chrX:41847310-41847498 (view UCSC Genome Browser custom track) |
| Alignm length: | 192 |
| Alignm identity: | 147 |
| Alignm E-value: | 2e-36 |
| Alignm gaps (pig, cow): | 117, 0 |
| Conread position: | 284-476 |
| Cow position: | chrX:24280140-24279950 (view UCSC Genome Browser custom track) |
| Alignm length: | 194 |
| Alignm identity: | 151 |
| Alignm E-value: | 2e-38 |
| Alignm gaps (pig, cow): | 97, 92 |
| Conread position: | 287-475 |
| Cow position: | chrX:39713768-39713582 (view UCSC Genome Browser custom track) |
| Alignm length: | 189 |
| Alignm identity: | 142 |
| Alignm E-value: | 5e-34 |
| Alignm gaps (pig, cow): | 141, 0 |
| Conread position: | 287-475 |
| Cow position: | chrX:44193223-44193405 (view UCSC Genome Browser custom track) |
| Alignm length: | 189 |
| Alignm identity: | 145 |
| Alignm E-value: | 5e-35 |
| Alignm gaps (pig, cow): | 96, 0 |
| Conread position: | 326-475 |
| Cow position: | chrX:11074007-11074152 (view UCSC Genome Browser custom track) |
| Alignm length: | 150 |
| Alignm identity: | 123 |
| Alignm E-value: | 1e-33 |
| Alignm gaps (pig, cow): | 62, 0 |
| Conread position: | 348-475 |
| Cow position: | chrX:28765952-28766077 (view UCSC Genome Browser custom track) |
| Alignm length: | 128 |
| Alignm identity: | 98 |
| Alignm E-value: | 3e-21 |
| Alignm gaps (pig, cow): | 80, 0 |
Show alignments to all cow chromosomes.