Cow genome map

Conread name: Utr1-UTR010070C09

Conread position: 1-145
Cow position:
Alignm length: 146
Alignm identity: 115
Alignm E-value: 2e-28
Alignm gaps (pig, cow): 7, 37

Conread position: 1-150
Cow position:
Alignm length: 152
Alignm identity: 117
Alignm E-value: 6e-27
Alignm gaps (pig, cow): 14, 38

Conread position: 1-150
Cow position:
Alignm length: 153
Alignm identity: 119
Alignm E-value: 2e-27
Alignm gaps (pig, cow): 45, 36

Conread position: 1-150
Cow position:
Alignm length: 151
Alignm identity: 113
Alignm E-value: 4e-22
Alignm gaps (pig, cow): 35, 14

Conread position: 2-136
Cow position:
Alignm length: 136
Alignm identity: 103
Alignm E-value: 3e-21
Alignm gaps (pig, cow): 100, 28

Conread position: 2-139
Cow position:
Alignm length: 139
Alignm identity: 111
Alignm E-value: 6e-27
Alignm gaps (pig, cow): 90, 31

Conread position: 2-140
Cow position:
Alignm length: 139
Alignm identity: 110
Alignm E-value: 6e-27
Alignm gaps (pig, cow): 35, 0

Conread position: 2-144
Cow position:
Alignm length: 144
Alignm identity: 115
Alignm E-value: 5e-25
Alignm gaps (pig, cow): 12, 32

Conread position: 2-144
Cow position:
Alignm length: 144
Alignm identity: 112
Alignm E-value: 5e-24
Alignm gaps (pig, cow): 80, 35

Conread position: 2-144
Cow position:
Alignm length: 143
Alignm identity: 109
Alignm E-value: 1e-22
Alignm gaps (pig, cow): 31, 0

Conread position: 2-145
Cow position:
Alignm length: 145
Alignm identity: 113
Alignm E-value: 6e-27
Alignm gaps (pig, cow): 24, 36

Conread position: 2-145
Cow position:
Alignm length: 145
Alignm identity: 114
Alignm E-value: 7e-28
Alignm gaps (pig, cow): 9, 36

Conread position: 2-148
Cow position:
Alignm length: 147
Alignm identity: 114
Alignm E-value: 4e-23
Alignm gaps (pig, cow): 35, 0

Conread position: 2-149
Cow position:
Alignm length: 148
Alignm identity: 111
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 31, 0

Conread position: 2-150
Cow position:
Alignm length: 149
Alignm identity: 110
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 31, 0

Conread position: 2-150
Cow position:
Alignm length: 149
Alignm identity: 123
Alignm E-value: 1e-33
Alignm gaps (pig, cow): 12, 0

Conread position: 2-150
Cow position:
Alignm length: 150
Alignm identity: 120
Alignm E-value: 1e-30
Alignm gaps (pig, cow): 12, 32

Conread position: 2-150
Cow position:
Alignm length: 151
Alignm identity: 118
Alignm E-value: 5e-25
Alignm gaps (pig, cow): 7, 36

Conread position: 2-150
Cow position:
Alignm length: 149
Alignm identity: 117
Alignm E-value: 3e-29
Alignm gaps (pig, cow): 31, 0

Conread position: 2-150
Cow position:
Alignm length: 149
Alignm identity: 113
Alignm E-value: 2e-24
Alignm gaps (pig, cow): 31, 0

Conread position: 2-150
Cow position:
Alignm length: 149
Alignm identity: 115
Alignm E-value: 2e-24
Alignm gaps (pig, cow): 36, 0

Conread position: 2-150
Cow position:
Alignm length: 149
Alignm identity: 110
Alignm E-value: 4e-23
Alignm gaps (pig, cow): 35, 0

Conread position: 2-150
Cow position:
Alignm length: 149
Alignm identity: 114
Alignm E-value: 5e-25
Alignm gaps (pig, cow): 35, 0

Conread position: 2-150
Cow position:
Alignm length: 149
Alignm identity: 119
Alignm E-value: 3e-29
Alignm gaps (pig, cow): 8, 0

Conread position: 2-150
Cow position:
Alignm length: 149
Alignm identity: 118
Alignm E-value: 2e-28
Alignm gaps (pig, cow): 35, 0

Conread position: 2-150
Cow position:
Alignm length: 151
Alignm identity: 113
Alignm E-value: 1e-22
Alignm gaps (pig, cow): 88, 39

Conread position: 2-150
Cow position:
Alignm length: 149
Alignm identity: 114
Alignm E-value: 5e-25
Alignm gaps (pig, cow): 8, 0

Conread position: 2-150
Cow position:
Alignm length: 149
Alignm identity: 115
Alignm E-value: 5e-25
Alignm gaps (pig, cow): 8, 0

Conread position: 2-150
Cow position:
Alignm length: 149
Alignm identity: 115
Alignm E-value: 2e-26
Alignm gaps (pig, cow): 31, 0

Conread position: 2-150
Cow position:
Alignm length: 149
Alignm identity: 117
Alignm E-value: 1e-23
Alignm gaps (pig, cow): 8, 0

Conread position: 2-150
Cow position:
Alignm length: 149
Alignm identity: 117
Alignm E-value: 7e-28
Alignm gaps (pig, cow): 31, 0

Conread position: 2-150
Cow position:
Alignm length: 150
Alignm identity: 116
Alignm E-value: 2e-25
Alignm gaps (pig, cow): 92, 8

Conread position: 2-150
Cow position:
Alignm length: 150
Alignm identity: 116
Alignm E-value: 2e-25
Alignm gaps (pig, cow): 97, 35

Conread position: 2-150
Cow position:
Alignm length: 149
Alignm identity: 110
Alignm E-value: 1e-22
Alignm gaps (pig, cow): 31, 0

Conread position: 2-150
Cow position:
Alignm length: 150
Alignm identity: 113
Alignm E-value: 5e-24
Alignm gaps (pig, cow): 49, 39

Conread position: 2-150
Cow position:
Alignm length: 149
Alignm identity: 113
Alignm E-value: 2e-25
Alignm gaps (pig, cow): 31, 0

Conread position: 2-150
Cow position:
Alignm length: 150
Alignm identity: 111
Alignm E-value: 1e-22
Alignm gaps (pig, cow): 12, 36

Conread position: 2-152
Cow position:
Alignm length: 152
Alignm identity: 114
Alignm E-value: 2e-24
Alignm gaps (pig, cow): 6, 36

Conread position: 2-153
Cow position:
Alignm length: 153
Alignm identity: 123
Alignm E-value: 9e-30
Alignm gaps (pig, cow): 145, 36

Conread position: 2-153
Cow position:
Alignm length: 153
Alignm identity: 119
Alignm E-value: 2e-28
Alignm gaps (pig, cow): 105, 33

Conread position: 2-153
Cow position:
Alignm length: 152
Alignm identity: 123
Alignm E-value: 4e-34
Alignm gaps (pig, cow): 35, 0

Conread position: 2-154
Cow position:
Alignm length: 154
Alignm identity: 126
Alignm E-value: 1e-34
Alignm gaps (pig, cow): 12, 32

Conread position: 3-132
Cow position:
Alignm length: 131
Alignm identity: 103
Alignm E-value: 1e-22
Alignm gaps (pig, cow): 13, 35

Conread position: 3-143
Cow position:
Alignm length: 146
Alignm identity: 112
Alignm E-value: 4e-22
Alignm gaps (pig, cow): 13, 32

Conread position: 3-143
Cow position:
Alignm length: 141
Alignm identity: 108
Alignm E-value: 4e-22
Alignm gaps (pig, cow): 34, 0

Conread position: 3-149
Cow position:
Alignm length: 147
Alignm identity: 111
Alignm E-value: 4e-23
Alignm gaps (pig, cow): 34, 0

Conread position: 3-150
Cow position:
Alignm length: 156
Alignm identity: 120
Alignm E-value: 2e-24
Alignm gaps (pig, cow): 89, 34

Conread position: 3-150
Cow position:
Alignm length: 148
Alignm identity: 116
Alignm E-value: 1e-23
Alignm gaps (pig, cow): 7, 0

Conread position: 3-150
Cow position:
Alignm length: 148
Alignm identity: 117
Alignm E-value: 3e-29
Alignm gaps (pig, cow): 7, 0

Conread position: 3-150
Cow position:
Alignm length: 148
Alignm identity: 114
Alignm E-value: 2e-25
Alignm gaps (pig, cow): 11, 0

Conread position: 3-150
Cow position:
Alignm length: 148
Alignm identity: 114
Alignm E-value: 4e-23
Alignm gaps (pig, cow): 34, 0

Conread position: 3-150
Cow position:
Alignm length: 148
Alignm identity: 113
Alignm E-value: 4e-22
Alignm gaps (pig, cow): 34, 0

Conread position: 4-150
Cow position:
Alignm length: 147
Alignm identity: 117
Alignm E-value: 3e-30
Alignm gaps (pig, cow): 31, 0

Conread position: 4-150
Cow position:
Alignm length: 149
Alignm identity: 110
Alignm E-value: 3e-21
Alignm gaps (pig, cow): 22, 34

Conread position: 4-150
Cow position:
Alignm length: 151
Alignm identity: 118
Alignm E-value: 5e-24
Alignm gaps (pig, cow): 96, 32

Conread position: 4-150
Cow position:
Alignm length: 149
Alignm identity: 117
Alignm E-value: 6e-26
Alignm gaps (pig, cow): 35, 89

Conread position: 5-150
Cow position:
Alignm length: 147
Alignm identity: 119
Alignm E-value: 3e-30
Alignm gaps (pig, cow): 46, 36

Conread position: 6-143
Cow position:
Alignm length: 139
Alignm identity: 109
Alignm E-value: 5e-25
Alignm gaps (pig, cow): 119, 31

Conread position: 6-150
Cow position:
Alignm length: 145
Alignm identity: 118
Alignm E-value: 1e-32
Alignm gaps (pig, cow): 31, 0

Conread position: 6-150
Cow position:
Alignm length: 145
Alignm identity: 110
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 31, 0

Conread position: 6-152
Cow position:
Alignm length: 147
Alignm identity: 114
Alignm E-value: 4e-23
Alignm gaps (pig, cow): 31, 0

Conread position: 6-153
Cow position:
Alignm length: 156
Alignm identity: 119
Alignm E-value: 1e-23
Alignm gaps (pig, cow): 88, 30

Conread position: 6-154
Cow position:
Alignm length: 150
Alignm identity: 111
Alignm E-value: 3e-21
Alignm gaps (pig, cow): 144, 27

Conread position: 7-140
Cow position:
Alignm length: 134
Alignm identity: 105
Alignm E-value: 1e-22
Alignm gaps (pig, cow): 30, 0

Conread position: 7-143
Cow position:
Alignm length: 137
Alignm identity: 105
Alignm E-value: 4e-23
Alignm gaps (pig, cow): 30, 0

Conread position: 7-150
Cow position:
Alignm length: 148
Alignm identity: 111
Alignm E-value: 3e-21
Alignm gaps (pig, cow): 34, 86

Conread position: 7-150
Cow position:
Alignm length: 144
Alignm identity: 108
Alignm E-value: 3e-21
Alignm gaps (pig, cow): 30, 0

Conread position: 7-153
Cow position:
Alignm length: 148
Alignm identity: 117
Alignm E-value: 5e-25
Alignm gaps (pig, cow): 107, 19

Conread position: 9-142
Cow position:
Alignm length: 135
Alignm identity: 107
Alignm E-value: 6e-26
Alignm gaps (pig, cow): 93, 30

Conread position: 9-143
Cow position:
Alignm length: 135
Alignm identity: 108
Alignm E-value: 7e-28
Alignm gaps (pig, cow): 28, 0

Conread position: 10-141
Cow position:
Alignm length: 132
Alignm identity: 109
Alignm E-value: 3e-30
Alignm gaps (pig, cow): 27, 0

Conread position: 10-142
Cow position:
Alignm length: 134
Alignm identity: 104
Alignm E-value: 1e-23
Alignm gaps (pig, cow): 12, 29

Conread position: 10-143
Cow position:
Alignm length: 134
Alignm identity: 104
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 27, 0

Conread position: 10-143
Cow position:
Alignm length: 134
Alignm identity: 104
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 27, 0

Conread position: 10-143
Cow position:
Alignm length: 134
Alignm identity: 107
Alignm E-value: 5e-25
Alignm gaps (pig, cow): 27, 0

Conread position: 10-143
Cow position:
Alignm length: 135
Alignm identity: 108
Alignm E-value: 1e-22
Alignm gaps (pig, cow): 112, 11

Conread position: 10-144
Cow position:
Alignm length: 135
Alignm identity: 110
Alignm E-value: 9e-30
Alignm gaps (pig, cow): 27, 0

Conread position: 10-149
Cow position:
Alignm length: 140
Alignm identity: 106
Alignm E-value: 1e-22
Alignm gaps (pig, cow): 28, 0

Conread position: 10-150
Cow position:
Alignm length: 141
Alignm identity: 113
Alignm E-value: 2e-25
Alignm gaps (pig, cow): 25, 0

Conread position: 10-150
Cow position:
Alignm length: 141
Alignm identity: 108
Alignm E-value: 1e-23
Alignm gaps (pig, cow): 27, 0

Conread position: 10-150
Cow position:
Alignm length: 144
Alignm identity: 113
Alignm E-value: 6e-26
Alignm gaps (pig, cow): 80, 23

Conread position: 10-150
Cow position:
Alignm length: 142
Alignm identity: 107
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 95, 27

Conread position: 10-150
Cow position:
Alignm length: 141
Alignm identity: 106
Alignm E-value: 1e-22
Alignm gaps (pig, cow): 31, 0

Conread position: 10-150
Cow position:
Alignm length: 141
Alignm identity: 110
Alignm E-value: 5e-24
Alignm gaps (pig, cow): 22, 0

Conread position: 10-150
Cow position:
Alignm length: 141
Alignm identity: 110
Alignm E-value: 1e-23
Alignm gaps (pig, cow): 27, 0

Conread position: 10-150
Cow position:
Alignm length: 141
Alignm identity: 105
Alignm E-value: 4e-22
Alignm gaps (pig, cow): 27, 0

Conread position: 10-150
Cow position:
Alignm length: 141
Alignm identity: 107
Alignm E-value: 4e-22
Alignm gaps (pig, cow): 27, 0

Conread position: 10-150
Cow position:
Alignm length: 141
Alignm identity: 111
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 28, 0

Conread position: 10-150
Cow position:
Alignm length: 141
Alignm identity: 106
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 28, 0

Conread position: 10-150
Cow position:
Alignm length: 141
Alignm identity: 108
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 27, 0

Conread position: 10-150
Cow position:
Alignm length: 144
Alignm identity: 112
Alignm E-value: 2e-24
Alignm gaps (pig, cow): 92, 27

Conread position: 10-150
Cow position:
Alignm length: 141
Alignm identity: 109
Alignm E-value: 1e-23
Alignm gaps (pig, cow): 27, 0

Conread position: 10-150
Cow position:
Alignm length: 141
Alignm identity: 108
Alignm E-value: 1e-23
Alignm gaps (pig, cow): 38, 0

Conread position: 10-150
Cow position:
Alignm length: 141
Alignm identity: 108
Alignm E-value: 4e-23
Alignm gaps (pig, cow): 27, 0

Conread position: 10-152
Cow position:
Alignm length: 149
Alignm identity: 113
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 63, 27

Conread position: 10-152
Cow position:
Alignm length: 143
Alignm identity: 117
Alignm E-value: 1e-31
Alignm gaps (pig, cow): 27, 0

Conread position: 10-153
Cow position:
Alignm length: 146
Alignm identity: 115
Alignm E-value: 6e-26
Alignm gaps (pig, cow): 7, 25

Conread position: 11-148
Cow position:
Alignm length: 138
Alignm identity: 108
Alignm E-value: 2e-25
Alignm gaps (pig, cow): 17, 0

Conread position: 11-150
Cow position:
Alignm length: 140
Alignm identity: 110
Alignm E-value: 2e-27
Alignm gaps (pig, cow): 26, 0

Conread position: 11-151
Cow position:
Alignm length: 141
Alignm identity: 108
Alignm E-value: 4e-23
Alignm gaps (pig, cow): 26, 0

Conread position: 11-151
Cow position:
Alignm length: 141
Alignm identity: 110
Alignm E-value: 4e-23
Alignm gaps (pig, cow): 27, 0

Conread position: 11-152
Cow position:
Alignm length: 142
Alignm identity: 107
Alignm E-value: 4e-22
Alignm gaps (pig, cow): 27, 0

Conread position: 12-153
Cow position:
Alignm length: 142
Alignm identity: 117
Alignm E-value: 4e-33
Alignm gaps (pig, cow): 25, 0

Conread position: 13-148
Cow position:
Alignm length: 136
Alignm identity: 107
Alignm E-value: 2e-26
Alignm gaps (pig, cow): 25, 0

Conread position: 14-148
Cow position:
Alignm length: 135
Alignm identity: 112
Alignm E-value: 9e-30
Alignm gaps (pig, cow): 23, 0

Conread position: 14-150
Cow position:
Alignm length: 143
Alignm identity: 112
Alignm E-value: 2e-24
Alignm gaps (pig, cow): 78, 23

Conread position: 14-150
Cow position:
Alignm length: 137
Alignm identity: 104
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 24, 0

Conread position: 14-150
Cow position:
Alignm length: 137
Alignm identity: 104
Alignm E-value: 3e-21
Alignm gaps (pig, cow): 19, 0

Conread position: 14-152
Cow position:
Alignm length: 139
Alignm identity: 107
Alignm E-value: 1e-23
Alignm gaps (pig, cow): 23, 0

Conread position: 14-152
Cow position:
Alignm length: 139
Alignm identity: 107
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 20, 0

Conread position: 14-154
Cow position:
Alignm length: 144
Alignm identity: 112
Alignm E-value: 5e-25
Alignm gaps (pig, cow): 70, 23

Conread position: 14-168
Cow position:
Alignm length: 158
Alignm identity: 116
Alignm E-value: 4e-22
Alignm gaps (pig, cow): 138, 23

Conread position: 15-150
Cow position:
Alignm length: 137
Alignm identity: 105
Alignm E-value: 3e-21
Alignm gaps (pig, cow): 107, 22

Conread position: 15-152
Cow position:
Alignm length: 138
Alignm identity: 105
Alignm E-value: 1e-22
Alignm gaps (pig, cow): 22, 0

Conread position: 17-150
Cow position:
Alignm length: 134
Alignm identity: 107
Alignm E-value: 6e-26
Alignm gaps (pig, cow): 20, 0

Conread position: 20-153
Cow position:
Alignm length: 134
Alignm identity: 106
Alignm E-value: 5e-25
Alignm gaps (pig, cow): 13, 0

Conread position: 22-131
Cow position:
Alignm length: 110
Alignm identity: 93
Alignm E-value: 4e-23
Alignm gaps (pig, cow): 11, 0

Conread position: 22-150
Cow position:
Alignm length: 129
Alignm identity: 107
Alignm E-value: 8e-29
Alignm gaps (pig, cow): 15, 0

Conread position: 24-150
Cow position:
Alignm length: 127
Alignm identity: 103
Alignm E-value: 2e-26
Alignm gaps (pig, cow): 9, 0

Conread position: 24-150
Cow position:
Alignm length: 127
Alignm identity: 101
Alignm E-value: 1e-22
Alignm gaps (pig, cow): 13, 0

Conread position: 24-150
Cow position:
Alignm length: 127
Alignm identity: 100
Alignm E-value: 1e-23
Alignm gaps (pig, cow): 11, 0

Conread position: 24-150
Cow position:
Alignm length: 127
Alignm identity: 100
Alignm E-value: 5e-24
Alignm gaps (pig, cow): 13, 0

Conread position: 27-150
Cow position:
Alignm length: 124
Alignm identity: 97
Alignm E-value: 1e-22
Alignm gaps (pig, cow): 10, 0

Conread position: 30-144
Cow position:
Alignm length: 115
Alignm identity: 94
Alignm E-value: 2e-24
Alignm gaps (pig, cow): 5, 0

Conread position: 35-142
Cow position:
Alignm length: 110
Alignm identity: 92
Alignm E-value: 1e-23
Alignm gaps (pig, cow): 60, 69

Conread position: 36-140
Cow position:
Alignm length: 105
Alignm identity: 86
Alignm E-value: 1e-22
Alignm gaps (pig, cow): 0, 0

Conread position: 130-278
Cow position:
Alignm length: 151
Alignm identity: 114
Alignm E-value: 3e-21
Alignm gaps (pig, cow): 7, 16

Conread position: 137-291
Cow position:
Alignm length: 161
Alignm identity: 119
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 26, 149

Conread position: 149-279
Cow position:
Alignm length: 133
Alignm identity: 102
Alignm E-value: 3e-21
Alignm gaps (pig, cow): 13, 51

Conread position: 152-261
Cow position:
Alignm length: 111
Alignm identity: 90
Alignm E-value: 3e-21
Alignm gaps (pig, cow): 10, 47

Conread position: 152-267
Cow position:
Alignm length: 117
Alignm identity: 96
Alignm E-value: 3e-21
Alignm gaps (pig, cow): 10, 24

Conread position: 152-278
Cow position:
Alignm length: 128
Alignm identity: 103
Alignm E-value: 1e-22
Alignm gaps (pig, cow): 10, 24

Conread position: 152-278
Cow position:
Alignm length: 128
Alignm identity: 101
Alignm E-value: 3e-21
Alignm gaps (pig, cow): 9, 46

Conread position: 152-278
Cow position:
Alignm length: 129
Alignm identity: 103
Alignm E-value: 3e-21
Alignm gaps (pig, cow): 10, 23

Conread position: 152-278
Cow position:
Alignm length: 128
Alignm identity: 100
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 10, 47

Conread position: 152-278
Cow position:
Alignm length: 128
Alignm identity: 101
Alignm E-value: 3e-21
Alignm gaps (pig, cow): 10, 47

Conread position: 152-278
Cow position:
Alignm length: 128
Alignm identity: 103
Alignm E-value: 2e-24
Alignm gaps (pig, cow): 10, 55

Conread position: 152-278
Cow position:
Alignm length: 130
Alignm identity: 101
Alignm E-value: 3e-21
Alignm gaps (pig, cow): 10, 47

Conread position: 153-278
Cow position:
Alignm length: 127
Alignm identity: 100
Alignm E-value: 1e-22
Alignm gaps (pig, cow): 9, 23

Conread position: 153-280
Cow position:
Alignm length: 130
Alignm identity: 103
Alignm E-value: 1e-22
Alignm gaps (pig, cow): 9, 46

Conread position: 161-268
Cow position:
Alignm length: 108
Alignm identity: 92
Alignm E-value: 1e-23
Alignm gaps (pig, cow): 20, 0

Conread position: 181-278
Cow position:
Alignm length: 99
Alignm identity: 84
Alignm E-value: 3e-21
Alignm gaps (pig, cow): 45, 16

Show alignments to all cow chromosomes.