Cow genome map

Conread name: Utr1-UTR010070C09

Conread position: 1-150
Cow position: chr21:5218979-5218837 (view UCSC Genome Browser custom track)
Alignm length: 150
Alignm identity: 112
Alignm E-value: 9e-21
Alignm gaps (pig, cow): 14, 0

Conread position: 1-150
Cow position: chr21:6834325-6834177 (view UCSC Genome Browser custom track)
Alignm length: 153
Alignm identity: 114
Alignm E-value: 9e-21
Alignm gaps (pig, cow): 8, 36

Conread position: 1-153
Cow position: chr21:25345136-25344986 (view UCSC Genome Browser custom track)
Alignm length: 153
Alignm identity: 115
Alignm E-value: 2e-25
Alignm gaps (pig, cow): 32, 0

Conread position: 1-157
Cow position: chr21:19136631-19136780 (view UCSC Genome Browser custom track)
Alignm length: 158
Alignm identity: 118
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 110, 36

Conread position: 2-99
Cow position: chr21:12074907-12075002 (view UCSC Genome Browser custom track)
Alignm length: 98
Alignm identity: 85
Alignm E-value: 1e-23
Alignm gaps (pig, cow): 35, 0

Conread position: 2-132
Cow position: chr21:31278459-31278331 (view UCSC Genome Browser custom track)
Alignm length: 131
Alignm identity: 104
Alignm E-value: 2e-25
Alignm gaps (pig, cow): 31, 0

Conread position: 2-135
Cow position: chr21:12293295-12293164 (view UCSC Genome Browser custom track)
Alignm length: 136
Alignm identity: 105
Alignm E-value: 3e-21
Alignm gaps (pig, cow): 13, 36

Conread position: 2-140
Cow position: chr21:5214622-5214486 (view UCSC Genome Browser custom track)
Alignm length: 140
Alignm identity: 107
Alignm E-value: 1e-22
Alignm gaps (pig, cow): 99, 16

Conread position: 2-140
Cow position: chr21:24858586-24858453 (view UCSC Genome Browser custom track)
Alignm length: 139
Alignm identity: 105
Alignm E-value: 9e-21
Alignm gaps (pig, cow): 13, 0

Conread position: 2-140
Cow position: chr21:41482702-41482838 (view UCSC Genome Browser custom track)
Alignm length: 140
Alignm identity: 105
Alignm E-value: 9e-21
Alignm gaps (pig, cow): 92, 35

Conread position: 2-143
Cow position: chr21:2904032-2904170 (view UCSC Genome Browser custom track)
Alignm length: 144
Alignm identity: 109
Alignm E-value: 3e-21
Alignm gaps (pig, cow): 98, 35

Conread position: 2-143
Cow position: chr21:41140442-41140583 (view UCSC Genome Browser custom track)
Alignm length: 144
Alignm identity: 110
Alignm E-value: 1e-23
Alignm gaps (pig, cow): 15, 37

Conread position: 2-143
Cow position: chr21:42227426-42227564 (view UCSC Genome Browser custom track)
Alignm length: 142
Alignm identity: 113
Alignm E-value: 2e-28
Alignm gaps (pig, cow): 35, 0

Conread position: 2-144
Cow position: chr21:6583869-6584007 (view UCSC Genome Browser custom track)
Alignm length: 143
Alignm identity: 107
Alignm E-value: 3e-21
Alignm gaps (pig, cow): 35, 0

Conread position: 2-144
Cow position: chr21:34737432-34737293 (view UCSC Genome Browser custom track)
Alignm length: 143
Alignm identity: 110
Alignm E-value: 1e-24
Alignm gaps (pig, cow): 31, 0

Conread position: 2-144
Cow position: chr21:44251570-44251709 (view UCSC Genome Browser custom track)
Alignm length: 143
Alignm identity: 114
Alignm E-value: 2e-28
Alignm gaps (pig, cow): 31, 0

Conread position: 2-145
Cow position: chr21:44724103-44724240 (view UCSC Genome Browser custom track)
Alignm length: 146
Alignm identity: 113
Alignm E-value: 1e-22
Alignm gaps (pig, cow): 15, 37

Conread position: 2-145
Cow position: chr21:49144729-49144870 (view UCSC Genome Browser custom track)
Alignm length: 144
Alignm identity: 108
Alignm E-value: 1e-23
Alignm gaps (pig, cow): 35, 0

Conread position: 2-148
Cow position: chr21:40266395-40266251 (view UCSC Genome Browser custom track)
Alignm length: 147
Alignm identity: 111
Alignm E-value: 5e-25
Alignm gaps (pig, cow): 35, 0

Conread position: 2-149
Cow position: chr21:4109047-4108904 (view UCSC Genome Browser custom track)
Alignm length: 148
Alignm identity: 113
Alignm E-value: 1e-24
Alignm gaps (pig, cow): 8, 0

Conread position: 2-149
Cow position: chr21:16797122-16796980 (view UCSC Genome Browser custom track)
Alignm length: 149
Alignm identity: 116
Alignm E-value: 1e-24
Alignm gaps (pig, cow): 91, 8

Conread position: 2-149
Cow position: chr21:27863249-27863384 (view UCSC Genome Browser custom track)
Alignm length: 148
Alignm identity: 115
Alignm E-value: 3e-21
Alignm gaps (pig, cow): 8, 0

Conread position: 2-149
Cow position: chr21:41829107-41829252 (view UCSC Genome Browser custom track)
Alignm length: 148
Alignm identity: 111
Alignm E-value: 1e-24
Alignm gaps (pig, cow): 35, 0

Conread position: 2-149
Cow position: chr21:42047769-42047913 (view UCSC Genome Browser custom track)
Alignm length: 148
Alignm identity: 109
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 35, 0

Conread position: 2-150
Cow position: chr21:47319-47168 (view UCSC Genome Browser custom track)
Alignm length: 154
Alignm identity: 117
Alignm E-value: 1e-23
Alignm gaps (pig, cow): 13, 36

Conread position: 2-150
Cow position: chr21:71859-71715 (view UCSC Genome Browser custom track)
Alignm length: 151
Alignm identity: 115
Alignm E-value: 3e-22
Alignm gaps (pig, cow): 10, 37

Conread position: 2-150
Cow position: chr21:745441-745303 (view UCSC Genome Browser custom track)
Alignm length: 149
Alignm identity: 117
Alignm E-value: 1e-24
Alignm gaps (pig, cow): 36, 0

Conread position: 2-150
Cow position: chr21:8545747-8545895 (view UCSC Genome Browser custom track)
Alignm length: 151
Alignm identity: 118
Alignm E-value: 6e-28
Alignm gaps (pig, cow): 12, 38

Conread position: 2-150
Cow position: chr21:9278799-9278653 (view UCSC Genome Browser custom track)
Alignm length: 149
Alignm identity: 109
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 31, 0

Conread position: 2-150
Cow position: chr21:12322769-12322625 (view UCSC Genome Browser custom track)
Alignm length: 149
Alignm identity: 111
Alignm E-value: 3e-22
Alignm gaps (pig, cow): 31, 0

Conread position: 2-150
Cow position: chr21:12473791-12473933 (view UCSC Genome Browser custom track)
Alignm length: 149
Alignm identity: 113
Alignm E-value: 1e-23
Alignm gaps (pig, cow): 35, 0

Conread position: 2-150
Cow position: chr21:13134867-13134728 (view UCSC Genome Browser custom track)
Alignm length: 149
Alignm identity: 117
Alignm E-value: 1e-24
Alignm gaps (pig, cow): 8, 0

Conread position: 2-150
Cow position: chr21:16099289-16099437 (view UCSC Genome Browser custom track)
Alignm length: 151
Alignm identity: 120
Alignm E-value: 2e-29
Alignm gaps (pig, cow): 92, 34

Conread position: 2-150
Cow position: chr21:27521071-27521212 (view UCSC Genome Browser custom track)
Alignm length: 149
Alignm identity: 121
Alignm E-value: 3e-30
Alignm gaps (pig, cow): 27, 0

Conread position: 2-150
Cow position: chr21:27810663-27810515 (view UCSC Genome Browser custom track)
Alignm length: 151
Alignm identity: 113
Alignm E-value: 4e-23
Alignm gaps (pig, cow): 83, 31

Conread position: 2-150
Cow position: chr21:28882454-28882309 (view UCSC Genome Browser custom track)
Alignm length: 149
Alignm identity: 117
Alignm E-value: 7e-29
Alignm gaps (pig, cow): 36, 0

Conread position: 2-150
Cow position: chr21:30794152-30794298 (view UCSC Genome Browser custom track)
Alignm length: 149
Alignm identity: 111
Alignm E-value: 1e-23
Alignm gaps (pig, cow): 33, 0

Conread position: 2-150
Cow position: chr21:31652658-31652512 (view UCSC Genome Browser custom track)
Alignm length: 149
Alignm identity: 108
Alignm E-value: 3e-21
Alignm gaps (pig, cow): 36, 0

Conread position: 2-150
Cow position: chr21:34209743-34209888 (view UCSC Genome Browser custom track)
Alignm length: 149
Alignm identity: 116
Alignm E-value: 6e-28
Alignm gaps (pig, cow): 36, 0

Conread position: 2-150
Cow position: chr21:37706140-37706287 (view UCSC Genome Browser custom track)
Alignm length: 150
Alignm identity: 120
Alignm E-value: 9e-31
Alignm gaps (pig, cow): 12, 32

Conread position: 2-150
Cow position: chr21:38918473-38918326 (view UCSC Genome Browser custom track)
Alignm length: 150
Alignm identity: 116
Alignm E-value: 2e-27
Alignm gaps (pig, cow): 92, 35

Conread position: 2-150
Cow position: chr21:42341670-42341810 (view UCSC Genome Browser custom track)
Alignm length: 150
Alignm identity: 116
Alignm E-value: 1e-22
Alignm gaps (pig, cow): 120, 35

Conread position: 2-151
Cow position: chr21:45446809-45446661 (view UCSC Genome Browser custom track)
Alignm length: 151
Alignm identity: 111
Alignm E-value: 3e-22
Alignm gaps (pig, cow): 102, 35

Conread position: 2-152
Cow position: chr21:25012348-25012208 (view UCSC Genome Browser custom track)
Alignm length: 151
Alignm identity: 116
Alignm E-value: 1e-22
Alignm gaps (pig, cow): 8, 0

Conread position: 2-152
Cow position: chr21:40475772-40475624 (view UCSC Genome Browser custom track)
Alignm length: 151
Alignm identity: 121
Alignm E-value: 1e-32
Alignm gaps (pig, cow): 35, 0

Conread position: 2-153
Cow position: chr21:26828700-26828849 (view UCSC Genome Browser custom track)
Alignm length: 152
Alignm identity: 119
Alignm E-value: 3e-30
Alignm gaps (pig, cow): 35, 0

Conread position: 2-153
Cow position: chr21:30359079-30359222 (view UCSC Genome Browser custom track)
Alignm length: 152
Alignm identity: 119
Alignm E-value: 6e-27
Alignm gaps (pig, cow): 35, 0

Conread position: 2-153
Cow position: chr21:31759955-31760100 (view UCSC Genome Browser custom track)
Alignm length: 152
Alignm identity: 119
Alignm E-value: 2e-26
Alignm gaps (pig, cow): 32, 0

Conread position: 2-153
Cow position: chr21:38482653-38482504 (view UCSC Genome Browser custom track)
Alignm length: 153
Alignm identity: 113
Alignm E-value: 3e-22
Alignm gaps (pig, cow): 105, 36

Conread position: 2-158
Cow position: chr21:5345152-5344998 (view UCSC Genome Browser custom track)
Alignm length: 157
Alignm identity: 123
Alignm E-value: 3e-31
Alignm gaps (pig, cow): 31, 0

Conread position: 2-158
Cow position: chr21:47713736-47713888 (view UCSC Genome Browser custom track)
Alignm length: 158
Alignm identity: 120
Alignm E-value: 1e-24
Alignm gaps (pig, cow): 92, 36

Conread position: 3-142
Cow position: chr21:641854-641723 (view UCSC Genome Browser custom track)
Alignm length: 140
Alignm identity: 107
Alignm E-value: 3e-21
Alignm gaps (pig, cow): 34, 0

Conread position: 3-146
Cow position: chr21:40589210-40589350 (view UCSC Genome Browser custom track)
Alignm length: 144
Alignm identity: 106
Alignm E-value: 9e-21
Alignm gaps (pig, cow): 34, 0

Conread position: 3-149
Cow position: chr21:24757207-24757069 (view UCSC Genome Browser custom track)
Alignm length: 147
Alignm identity: 114
Alignm E-value: 1e-24
Alignm gaps (pig, cow): 30, 0

Conread position: 3-150
Cow position: chr21:19339960-19340104 (view UCSC Genome Browser custom track)
Alignm length: 148
Alignm identity: 118
Alignm E-value: 8e-30
Alignm gaps (pig, cow): 34, 0

Conread position: 3-150
Cow position: chr21:45970908-45971046 (view UCSC Genome Browser custom track)
Alignm length: 149
Alignm identity: 115
Alignm E-value: 1e-22
Alignm gaps (pig, cow): 11, 35

Conread position: 3-153
Cow position: chr21:3135597-3135744 (view UCSC Genome Browser custom track)
Alignm length: 152
Alignm identity: 121
Alignm E-value: 8e-30
Alignm gaps (pig, cow): 13, 35

Conread position: 4-145
Cow position: chr21:40821627-40821762 (view UCSC Genome Browser custom track)
Alignm length: 142
Alignm identity: 111
Alignm E-value: 1e-24
Alignm gaps (pig, cow): 6, 0

Conread position: 4-150
Cow position: chr21:48482261-48482402 (view UCSC Genome Browser custom track)
Alignm length: 147
Alignm identity: 113
Alignm E-value: 1e-24
Alignm gaps (pig, cow): 33, 0

Conread position: 4-153
Cow position: chr21:18568369-18568514 (view UCSC Genome Browser custom track)
Alignm length: 150
Alignm identity: 115
Alignm E-value: 2e-25
Alignm gaps (pig, cow): 6, 0

Conread position: 4-153
Cow position: chr21:23979910-23980057 (view UCSC Genome Browser custom track)
Alignm length: 150
Alignm identity: 114
Alignm E-value: 2e-26
Alignm gaps (pig, cow): 33, 0

Conread position: 4-153
Cow position: chr21:40457878-40457726 (view UCSC Genome Browser custom track)
Alignm length: 157
Alignm identity: 119
Alignm E-value: 9e-21
Alignm gaps (pig, cow): 7, 34

Conread position: 6-135
Cow position: chr21:18578301-18578428 (view UCSC Genome Browser custom track)
Alignm length: 130
Alignm identity: 99
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 31, 0

Conread position: 6-142
Cow position: chr21:2536868-2537003 (view UCSC Genome Browser custom track)
Alignm length: 138
Alignm identity: 109
Alignm E-value: 5e-26
Alignm gaps (pig, cow): 8, 25

Conread position: 6-144
Cow position: chr21:24296498-24296633 (view UCSC Genome Browser custom track)
Alignm length: 139
Alignm identity: 105
Alignm E-value: 3e-22
Alignm gaps (pig, cow): 31, 0

Conread position: 6-145
Cow position: chr21:12310740-12310605 (view UCSC Genome Browser custom track)
Alignm length: 140
Alignm identity: 108
Alignm E-value: 1e-23
Alignm gaps (pig, cow): 27, 0

Conread position: 6-145
Cow position: chr21:20153224-20153089 (view UCSC Genome Browser custom track)
Alignm length: 141
Alignm identity: 111
Alignm E-value: 5e-25
Alignm gaps (pig, cow): 101, 31

Conread position: 6-149
Cow position: chr21:19236701-19236842 (view UCSC Genome Browser custom track)
Alignm length: 144
Alignm identity: 105
Alignm E-value: 9e-21
Alignm gaps (pig, cow): 31, 0

Conread position: 6-149
Cow position: chr21:42189493-42189627 (view UCSC Genome Browser custom track)
Alignm length: 144
Alignm identity: 111
Alignm E-value: 3e-22
Alignm gaps (pig, cow): 31, 0

Conread position: 6-150
Cow position: chr21:7768741-7768883 (view UCSC Genome Browser custom track)
Alignm length: 145
Alignm identity: 109
Alignm E-value: 1e-23
Alignm gaps (pig, cow): 35, 0

Conread position: 6-150
Cow position: chr21:10264302-10264161 (view UCSC Genome Browser custom track)
Alignm length: 145
Alignm identity: 115
Alignm E-value: 7e-29
Alignm gaps (pig, cow): 31, 0

Conread position: 6-150
Cow position: chr21:13225984-13225843 (view UCSC Genome Browser custom track)
Alignm length: 145
Alignm identity: 112
Alignm E-value: 5e-26
Alignm gaps (pig, cow): 32, 0

Conread position: 6-150
Cow position: chr21:15305028-15305171 (view UCSC Genome Browser custom track)
Alignm length: 147
Alignm identity: 112
Alignm E-value: 1e-23
Alignm gaps (pig, cow): 90, 31

Conread position: 6-150
Cow position: chr21:17890570-17890430 (view UCSC Genome Browser custom track)
Alignm length: 145
Alignm identity: 113
Alignm E-value: 5e-26
Alignm gaps (pig, cow): 31, 0

Conread position: 6-150
Cow position: chr21:23535980-23535837 (view UCSC Genome Browser custom track)
Alignm length: 146
Alignm identity: 115
Alignm E-value: 2e-28
Alignm gaps (pig, cow): 45, 31

Conread position: 6-150
Cow position: chr21:23568492-23568356 (view UCSC Genome Browser custom track)
Alignm length: 145
Alignm identity: 110
Alignm E-value: 3e-21
Alignm gaps (pig, cow): 27, 0

Conread position: 6-150
Cow position: chr21:38943341-38943480 (view UCSC Genome Browser custom track)
Alignm length: 147
Alignm identity: 113
Alignm E-value: 3e-22
Alignm gaps (pig, cow): 102, 31

Conread position: 6-150
Cow position: chr21:44829490-44829631 (view UCSC Genome Browser custom track)
Alignm length: 145
Alignm identity: 109
Alignm E-value: 4e-23
Alignm gaps (pig, cow): 16, 0

Conread position: 6-153
Cow position: chr21:58714-58568 (view UCSC Genome Browser custom track)
Alignm length: 148
Alignm identity: 115
Alignm E-value: 7e-29
Alignm gaps (pig, cow): 31, 0

Conread position: 6-153
Cow position: chr21:15444815-15444960 (view UCSC Genome Browser custom track)
Alignm length: 148
Alignm identity: 120
Alignm E-value: 4e-33
Alignm gaps (pig, cow): 31, 0

Conread position: 7-150
Cow position: chr21:1464609-1464471 (view UCSC Genome Browser custom track)
Alignm length: 144
Alignm identity: 109
Alignm E-value: 1e-22
Alignm gaps (pig, cow): 30, 0

Conread position: 7-150
Cow position: chr21:18450021-18449880 (view UCSC Genome Browser custom track)
Alignm length: 144
Alignm identity: 105
Alignm E-value: 9e-21
Alignm gaps (pig, cow): 30, 0

Conread position: 7-150
Cow position: chr21:31658888-31659023 (view UCSC Genome Browser custom track)
Alignm length: 144
Alignm identity: 111
Alignm E-value: 4e-23
Alignm gaps (pig, cow): 30, 0

Conread position: 7-150
Cow position: chr21:41156137-41155998 (view UCSC Genome Browser custom track)
Alignm length: 144
Alignm identity: 112
Alignm E-value: 5e-26
Alignm gaps (pig, cow): 25, 0

Conread position: 7-153
Cow position: chr21:31246536-31246393 (view UCSC Genome Browser custom track)
Alignm length: 147
Alignm identity: 108
Alignm E-value: 3e-21
Alignm gaps (pig, cow): 14, 0

Conread position: 9-128
Cow position: chr21:674932-674812 (view UCSC Genome Browser custom track)
Alignm length: 124
Alignm identity: 100
Alignm E-value: 3e-21
Alignm gaps (pig, cow): 80, 28

Conread position: 9-150
Cow position: chr21:18341483-18341347 (view UCSC Genome Browser custom track)
Alignm length: 142
Alignm identity: 110
Alignm E-value: 4e-24
Alignm gaps (pig, cow): 24, 0

Conread position: 9-150
Cow position: chr21:30938400-30938538 (view UCSC Genome Browser custom track)
Alignm length: 144
Alignm identity: 112
Alignm E-value: 4e-23
Alignm gaps (pig, cow): 8, 30

Conread position: 10-143
Cow position: chr21:6051768-6051638 (view UCSC Genome Browser custom track)
Alignm length: 134
Alignm identity: 104
Alignm E-value: 1e-23
Alignm gaps (pig, cow): 27, 0

Conread position: 10-143
Cow position: chr21:40820588-40820718 (view UCSC Genome Browser custom track)
Alignm length: 134
Alignm identity: 101
Alignm E-value: 9e-21
Alignm gaps (pig, cow): 27, 0

Conread position: 10-143
Cow position: chr21:42920737-42920870 (view UCSC Genome Browser custom track)
Alignm length: 136
Alignm identity: 103
Alignm E-value: 3e-21
Alignm gaps (pig, cow): 88, 27

Conread position: 10-145
Cow position: chr21:28919268-28919395 (view UCSC Genome Browser custom track)
Alignm length: 136
Alignm identity: 105
Alignm E-value: 9e-21
Alignm gaps (pig, cow): 27, 0

Conread position: 10-145
Cow position: chr21:36763325-36763194 (view UCSC Genome Browser custom track)
Alignm length: 136
Alignm identity: 107
Alignm E-value: 5e-25
Alignm gaps (pig, cow): 27, 0

Conread position: 10-148
Cow position: chr21:24351114-24350977 (view UCSC Genome Browser custom track)
Alignm length: 140
Alignm identity: 107
Alignm E-value: 4e-23
Alignm gaps (pig, cow): 101, 31

Conread position: 10-148
Cow position: chr21:28244730-28244600 (view UCSC Genome Browser custom track)
Alignm length: 139
Alignm identity: 112
Alignm E-value: 2e-26
Alignm gaps (pig, cow): 27, 0

Conread position: 10-149
Cow position: chr21:12349031-12348894 (view UCSC Genome Browser custom track)
Alignm length: 140
Alignm identity: 108
Alignm E-value: 2e-25
Alignm gaps (pig, cow): 27, 0

Conread position: 10-149
Cow position: chr21:41621391-41621254 (view UCSC Genome Browser custom track)
Alignm length: 140
Alignm identity: 109
Alignm E-value: 2e-26
Alignm gaps (pig, cow): 27, 0

Conread position: 10-149
Cow position: chr21:41738171-41738037 (view UCSC Genome Browser custom track)
Alignm length: 140
Alignm identity: 107
Alignm E-value: 3e-22
Alignm gaps (pig, cow): 27, 0

Conread position: 10-150
Cow position: chr21:6154063-6153928 (view UCSC Genome Browser custom track)
Alignm length: 141
Alignm identity: 106
Alignm E-value: 9e-21
Alignm gaps (pig, cow): 23, 0

Conread position: 10-150
Cow position: chr21:8430834-8430972 (view UCSC Genome Browser custom track)
Alignm length: 141
Alignm identity: 110
Alignm E-value: 6e-27
Alignm gaps (pig, cow): 27, 0

Conread position: 10-150
Cow position: chr21:8986289-8986149 (view UCSC Genome Browser custom track)
Alignm length: 143
Alignm identity: 107
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 88, 27

Conread position: 10-150
Cow position: chr21:10004620-10004758 (view UCSC Genome Browser custom track)
Alignm length: 141
Alignm identity: 116
Alignm E-value: 1e-32
Alignm gaps (pig, cow): 27, 0

Conread position: 10-150
Cow position: chr21:14452496-14452362 (view UCSC Genome Browser custom track)
Alignm length: 141
Alignm identity: 108
Alignm E-value: 3e-22
Alignm gaps (pig, cow): 27, 0

Conread position: 10-150
Cow position: chr21:15271176-15271309 (view UCSC Genome Browser custom track)
Alignm length: 141
Alignm identity: 107
Alignm E-value: 9e-21
Alignm gaps (pig, cow): 27, 0

Conread position: 10-150
Cow position: chr21:27677746-27677608 (view UCSC Genome Browser custom track)
Alignm length: 141
Alignm identity: 112
Alignm E-value: 7e-29
Alignm gaps (pig, cow): 27, 0

Conread position: 10-150
Cow position: chr21:27744292-27744153 (view UCSC Genome Browser custom track)
Alignm length: 143
Alignm identity: 113
Alignm E-value: 2e-26
Alignm gaps (pig, cow): 84, 27

Conread position: 10-150
Cow position: chr21:29418836-29418696 (view UCSC Genome Browser custom track)
Alignm length: 143
Alignm identity: 113
Alignm E-value: 2e-27
Alignm gaps (pig, cow): 16, 29

Conread position: 10-150
Cow position: chr21:32339482-32339612 (view UCSC Genome Browser custom track)
Alignm length: 141
Alignm identity: 111
Alignm E-value: 1e-22
Alignm gaps (pig, cow): 25, 0

Conread position: 10-150
Cow position: chr21:32392800-32392939 (view UCSC Genome Browser custom track)
Alignm length: 143
Alignm identity: 109
Alignm E-value: 3e-22
Alignm gaps (pig, cow): 90, 11

Conread position: 10-150
Cow position: chr21:37479327-37479465 (view UCSC Genome Browser custom track)
Alignm length: 141
Alignm identity: 106
Alignm E-value: 4e-23
Alignm gaps (pig, cow): 27, 0

Conread position: 10-150
Cow position: chr21:42501315-42501178 (view UCSC Genome Browser custom track)
Alignm length: 141
Alignm identity: 105
Alignm E-value: 3e-21
Alignm gaps (pig, cow): 27, 0

Conread position: 10-152
Cow position: chr21:3178108-3177972 (view UCSC Genome Browser custom track)
Alignm length: 144
Alignm identity: 113
Alignm E-value: 1e-23
Alignm gaps (pig, cow): 137, 27

Conread position: 10-152
Cow position: chr21:8358966-8359099 (view UCSC Genome Browser custom track)
Alignm length: 143
Alignm identity: 109
Alignm E-value: 3e-21
Alignm gaps (pig, cow): 34, 0

Conread position: 10-153
Cow position: chr21:41041211-41041069 (view UCSC Genome Browser custom track)
Alignm length: 146
Alignm identity: 111
Alignm E-value: 4e-23
Alignm gaps (pig, cow): 69, 27

Conread position: 10-153
Cow position: chr21:45537453-45537310 (view UCSC Genome Browser custom track)
Alignm length: 144
Alignm identity: 110
Alignm E-value: 6e-27
Alignm gaps (pig, cow): 0, 0

Conread position: 10-153
Cow position: chr21:46609740-46609879 (view UCSC Genome Browser custom track)
Alignm length: 144
Alignm identity: 108
Alignm E-value: 3e-22
Alignm gaps (pig, cow): 28, 0

Conread position: 11-143
Cow position: chr21:11644704-11644831 (view UCSC Genome Browser custom track)
Alignm length: 134
Alignm identity: 104
Alignm E-value: 9e-21
Alignm gaps (pig, cow): 95, 30

Conread position: 11-145
Cow position: chr21:22718521-22718651 (view UCSC Genome Browser custom track)
Alignm length: 135
Alignm identity: 103
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 26, 0

Conread position: 11-150
Cow position: chr21:6292011-6291874 (view UCSC Genome Browser custom track)
Alignm length: 140
Alignm identity: 112
Alignm E-value: 2e-29
Alignm gaps (pig, cow): 26, 0

Conread position: 11-150
Cow position: chr21:13842755-13842617 (view UCSC Genome Browser custom track)
Alignm length: 141
Alignm identity: 108
Alignm E-value: 4e-24
Alignm gaps (pig, cow): 104, 26

Conread position: 11-150
Cow position: chr21:29069061-29069198 (view UCSC Genome Browser custom track)
Alignm length: 140
Alignm identity: 106
Alignm E-value: 1e-23
Alignm gaps (pig, cow): 27, 0

Conread position: 11-150
Cow position: chr21:48242788-48242928 (view UCSC Genome Browser custom track)
Alignm length: 143
Alignm identity: 109
Alignm E-value: 4e-23
Alignm gaps (pig, cow): 77, 26

Conread position: 12-142
Cow position: chr21:34727465-34727337 (view UCSC Genome Browser custom track)
Alignm length: 131
Alignm identity: 103
Alignm E-value: 5e-25
Alignm gaps (pig, cow): 26, 0

Conread position: 12-150
Cow position: chr21:17184179-17184045 (view UCSC Genome Browser custom track)
Alignm length: 140
Alignm identity: 111
Alignm E-value: 5e-25
Alignm gaps (pig, cow): 112, 25

Conread position: 12-150
Cow position: chr21:38720510-38720377 (view UCSC Genome Browser custom track)
Alignm length: 140
Alignm identity: 107
Alignm E-value: 9e-21
Alignm gaps (pig, cow): 88, 25

Conread position: 13-139
Cow position: chr21:20925205-20925329 (view UCSC Genome Browser custom track)
Alignm length: 129
Alignm identity: 102
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 101, 14

Conread position: 13-150
Cow position: chr21:27711974-27712109 (view UCSC Genome Browser custom track)
Alignm length: 138
Alignm identity: 110
Alignm E-value: 6e-28
Alignm gaps (pig, cow): 22, 0

Conread position: 14-134
Cow position: chr21:30231437-30231555 (view UCSC Genome Browser custom track)
Alignm length: 122
Alignm identity: 98
Alignm E-value: 1e-22
Alignm gaps (pig, cow): 101, 23

Conread position: 14-142
Cow position: chr21:11353323-11353196 (view UCSC Genome Browser custom track)
Alignm length: 129
Alignm identity: 106
Alignm E-value: 2e-29
Alignm gaps (pig, cow): 21, 0

Conread position: 14-150
Cow position: chr21:868660-868796 (view UCSC Genome Browser custom track)
Alignm length: 139
Alignm identity: 105
Alignm E-value: 3e-21
Alignm gaps (pig, cow): 74, 23

Conread position: 14-150
Cow position: chr21:14464845-14464711 (view UCSC Genome Browser custom track)
Alignm length: 137
Alignm identity: 108
Alignm E-value: 2e-26
Alignm gaps (pig, cow): 21, 0

Conread position: 14-150
Cow position: chr21:16119903-16120033 (view UCSC Genome Browser custom track)
Alignm length: 137
Alignm identity: 107
Alignm E-value: 4e-23
Alignm gaps (pig, cow): 23, 0

Conread position: 14-150
Cow position: chr21:29011717-29011844 (view UCSC Genome Browser custom track)
Alignm length: 137
Alignm identity: 108
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 23, 0

Conread position: 14-150
Cow position: chr21:30970194-30970063 (view UCSC Genome Browser custom track)
Alignm length: 137
Alignm identity: 106
Alignm E-value: 1e-22
Alignm gaps (pig, cow): 23, 0

Conread position: 14-150
Cow position: chr21:43655961-43655830 (view UCSC Genome Browser custom track)
Alignm length: 137
Alignm identity: 105
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 23, 0

Conread position: 14-154
Cow position: chr21:11779279-11779419 (view UCSC Genome Browser custom track)
Alignm length: 143
Alignm identity: 110
Alignm E-value: 4e-24
Alignm gaps (pig, cow): 80, 24

Conread position: 16-150
Cow position: chr21:20160935-20160804 (view UCSC Genome Browser custom track)
Alignm length: 135
Alignm identity: 110
Alignm E-value: 7e-29
Alignm gaps (pig, cow): 22, 0

Conread position: 20-150
Cow position: chr21:17193495-17193621 (view UCSC Genome Browser custom track)
Alignm length: 131
Alignm identity: 106
Alignm E-value: 5e-26
Alignm gaps (pig, cow): 13, 0

Conread position: 20-153
Cow position: chr21:37014172-37014302 (view UCSC Genome Browser custom track)
Alignm length: 134
Alignm identity: 108
Alignm E-value: 2e-27
Alignm gaps (pig, cow): 17, 0

Conread position: 21-150
Cow position: chr21:16152692-16152569 (view UCSC Genome Browser custom track)
Alignm length: 130
Alignm identity: 101
Alignm E-value: 9e-21
Alignm gaps (pig, cow): 18, 0

Conread position: 22-153
Cow position: chr21:3360765-3360890 (view UCSC Genome Browser custom track)
Alignm length: 132
Alignm identity: 104
Alignm E-value: 4e-23
Alignm gaps (pig, cow): 15, 0

Conread position: 24-143
Cow position: chr21:8351045-8351158 (view UCSC Genome Browser custom track)
Alignm length: 120
Alignm identity: 96
Alignm E-value: 9e-21
Alignm gaps (pig, cow): 13, 0

Conread position: 24-144
Cow position: chr21:14746021-14745903 (view UCSC Genome Browser custom track)
Alignm length: 121
Alignm identity: 96
Alignm E-value: 1e-22
Alignm gaps (pig, cow): 9, 0

Conread position: 24-145
Cow position: chr21:31258718-31258599 (view UCSC Genome Browser custom track)
Alignm length: 122
Alignm identity: 102
Alignm E-value: 2e-28
Alignm gaps (pig, cow): 13, 0

Conread position: 24-150
Cow position: chr21:28237450-28237580 (view UCSC Genome Browser custom track)
Alignm length: 133
Alignm identity: 104
Alignm E-value: 3e-21
Alignm gaps (pig, cow): 70, 13

Conread position: 24-150
Cow position: chr21:42017352-42017475 (view UCSC Genome Browser custom track)
Alignm length: 128
Alignm identity: 101
Alignm E-value: 3e-22
Alignm gaps (pig, cow): 59, 13

Conread position: 24-153
Cow position: chr21:24266312-24266441 (view UCSC Genome Browser custom track)
Alignm length: 132
Alignm identity: 104
Alignm E-value: 1e-23
Alignm gaps (pig, cow): 75, 9

Conread position: 24-164
Cow position: chr21:42441879-42441741 (view UCSC Genome Browser custom track)
Alignm length: 141
Alignm identity: 108
Alignm E-value: 5e-25
Alignm gaps (pig, cow): 13, 0

Conread position: 27-150
Cow position: chr21:7424767-7424886 (view UCSC Genome Browser custom track)
Alignm length: 124
Alignm identity: 99
Alignm E-value: 4e-23
Alignm gaps (pig, cow): 10, 0

Conread position: 35-144
Cow position: chr21:10410463-10410356 (view UCSC Genome Browser custom track)
Alignm length: 110
Alignm identity: 92
Alignm E-value: 1e-24
Alignm gaps (pig, cow): 31, 0

Conread position: 35-150
Cow position: chr21:28191589-28191474 (view UCSC Genome Browser custom track)
Alignm length: 116
Alignm identity: 92
Alignm E-value: 4e-23
Alignm gaps (pig, cow): 0, 0

Conread position: 35-153
Cow position: chr21:27568134-27568019 (view UCSC Genome Browser custom track)
Alignm length: 119
Alignm identity: 96
Alignm E-value: 1e-22
Alignm gaps (pig, cow): 24, 0

Conread position: 35-243
Cow position: chr21:7535304-7535507 (view UCSC Genome Browser custom track)
Alignm length: 209
Alignm identity: 153
Alignm E-value: 3e-32
Alignm gaps (pig, cow): 22, 0

Conread position: 43-144
Cow position: chr21:39319175-39319276 (view UCSC Genome Browser custom track)
Alignm length: 102
Alignm identity: 86
Alignm E-value: 4e-24
Alignm gaps (pig, cow): 0, 0

Conread position: 142-289
Cow position: chr21:11706876-11706729 (view UCSC Genome Browser custom track)
Alignm length: 151
Alignm identity: 112
Alignm E-value: 9e-21
Alignm gaps (pig, cow): 20, 60

Conread position: 149-278
Cow position: chr21:43357381-43357252 (view UCSC Genome Browser custom track)
Alignm length: 133
Alignm identity: 107
Alignm E-value: 1e-24
Alignm gaps (pig, cow): 13, 25

Conread position: 152-266
Cow position: chr21:47802374-47802263 (view UCSC Genome Browser custom track)
Alignm length: 116
Alignm identity: 95
Alignm E-value: 3e-22
Alignm gaps (pig, cow): 51, 16

Conread position: 152-267
Cow position: chr21:42348792-42348679 (view UCSC Genome Browser custom track)
Alignm length: 117
Alignm identity: 94
Alignm E-value: 3e-21
Alignm gaps (pig, cow): 10, 50

Conread position: 152-270
Cow position: chr21:27863634-27863517 (view UCSC Genome Browser custom track)
Alignm length: 120
Alignm identity: 94
Alignm E-value: 9e-21
Alignm gaps (pig, cow): 10, 47

Conread position: 152-278
Cow position: chr21:38900660-38900784 (view UCSC Genome Browser custom track)
Alignm length: 128
Alignm identity: 100
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 10, 47

Conread position: 152-279
Cow position: chr21:33210084-33210209 (view UCSC Genome Browser custom track)
Alignm length: 129
Alignm identity: 100
Alignm E-value: 3e-21
Alignm gaps (pig, cow): 10, 46

Conread position: 152-289
Cow position: chr21:38449566-38449431 (view UCSC Genome Browser custom track)
Alignm length: 139
Alignm identity: 105
Alignm E-value: 9e-21
Alignm gaps (pig, cow): 11, 42

Conread position: 159-278
Cow position: chr21:5636827-5636712 (view UCSC Genome Browser custom track)
Alignm length: 120
Alignm identity: 96
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 7, 0

Conread position: 159-278
Cow position: chr21:9416136-9416254 (view UCSC Genome Browser custom track)
Alignm length: 121
Alignm identity: 95
Alignm E-value: 3e-21
Alignm gaps (pig, cow): 64, 39

Conread position: 159-278
Cow position: chr21:12462076-12461964 (view UCSC Genome Browser custom track)
Alignm length: 120
Alignm identity: 98
Alignm E-value: 3e-22
Alignm gaps (pig, cow): 21, 0

Conread position: 161-277
Cow position: chr21:23586772-23586885 (view UCSC Genome Browser custom track)
Alignm length: 117
Alignm identity: 95
Alignm E-value: 4e-23
Alignm gaps (pig, cow): 37, 0

Conread position: 162-268
Cow position: chr21:9998826-9998721 (view UCSC Genome Browser custom track)
Alignm length: 108
Alignm identity: 88
Alignm E-value: 9e-21
Alignm gaps (pig, cow): 59, 36

Conread position: 162-278
Cow position: chr21:912074-911961 (view UCSC Genome Browser custom track)
Alignm length: 117
Alignm identity: 93
Alignm E-value: 3e-21
Alignm gaps (pig, cow): 36, 0

Conread position: 162-278
Cow position: chr21:957565-957678 (view UCSC Genome Browser custom track)
Alignm length: 117
Alignm identity: 96
Alignm E-value: 4e-24
Alignm gaps (pig, cow): 36, 0

Conread position: 167-276
Cow position: chr21:5985420-5985310 (view UCSC Genome Browser custom track)
Alignm length: 113
Alignm identity: 92
Alignm E-value: 9e-21
Alignm gaps (pig, cow): 51, 30

Conread position: 170-278
Cow position: chr21:39401495-39401600 (view UCSC Genome Browser custom track)
Alignm length: 109
Alignm identity: 89
Alignm E-value: 3e-21
Alignm gaps (pig, cow): 28, 0

Show alignments to all cow chromosomes.