• Home
• Research
• Resources
• Publications
• About
• People
• Events
• Jobs
• News
• Contact

Cow genome map

           
Conread name:
           
Utr1-UTR01B050090
        

               
Conread position:
               
117-367
               

               
Cow position:
               
chr11:22884398-22884653 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
256
               

               
Alignm identity:
               
179
               

               
Alignm E-value:
               
4e-35
               

               
Alignm gaps (pig, cow):
               
19, 0
               

               
Conread position:
               
124-318
               

               
Cow position:
               
chr11:84968371-84968560 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
196
               

               
Alignm identity:
               
137
               

               
Alignm E-value:
               
1e-22
               

               
Alignm gaps (pig, cow):
               
123, 95
               

               
Conread position:
               
126-302
               

               
Cow position:
               
chr11:78672668-78672853 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
188
               

               
Alignm identity:
               
141
               

               
Alignm E-value:
               
1e-25
               

               
Alignm gaps (pig, cow):
               
103, 14
               

               
Conread position:
               
127-317
               

               
Cow position:
               
chr11:75918586-75918775 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
197
               

               
Alignm identity:
               
143
               

               
Alignm E-value:
               
1e-24
               

               
Alignm gaps (pig, cow):
               
42, 16
               

               
Conread position:
               
132-313
               

               
Cow position:
               
chr11:42066865-42067053 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
191
               

               
Alignm identity:
               
145
               

               
Alignm E-value:
               
2e-30
               

               
Alignm gaps (pig, cow):
               
8, 182
               

               
Conread position:
               
132-316
               

               
Cow position:
               
chr11:35213167-35212978 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
193
               

               
Alignm identity:
               
144
               

               
Alignm E-value:
               
6e-28
               

               
Alignm gaps (pig, cow):
               
25, 144
               

               
Conread position:
               
135-326
               

               
Cow position:
               
chr11:18915030-18915214 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
193
               

               
Alignm identity:
               
145
               

               
Alignm E-value:
               
8e-31
               

               
Alignm gaps (pig, cow):
               
15, 93
               

               
Conread position:
               
140-325
               

               
Cow position:
               
chr11:62483953-62483771 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
187
               

               
Alignm identity:
               
141
               

               
Alignm E-value:
               
1e-32
               

               
Alignm gaps (pig, cow):
               
9, 90
               

               
Conread position:
               
142-310
               

               
Cow position:
               
chr11:41603676-41603513 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
171
               

               
Alignm identity:
               
128
               

               
Alignm E-value:
               
1e-24
               

               
Alignm gaps (pig, cow):
               
12, 52
               

               
Conread position:
               
143-312
               

               
Cow position:
               
chr11:30857049-30857226 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
178
               

               
Alignm identity:
               
138
               

               
Alignm E-value:
               
8e-31
               

               
Alignm gaps (pig, cow):
               
14, 0
               

               
Conread position:
               
143-353
               

               
Cow position:
               
chr11:53487142-53486932 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
215
               

               
Alignm identity:
               
154
               

               
Alignm E-value:
               
2e-28
               

               
Alignm gaps (pig, cow):
               
14, 65
               

               
Conread position:
               
144-273
               

               
Cow position:
               
chr11:68206828-68206695 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
134
               

               
Alignm identity:
               
102
               

               
Alignm E-value:
               
8e-21
               

               
Alignm gaps (pig, cow):
               
83, 0
               

               
Conread position:
               
144-304
               

               
Cow position:
               
chr11:23271988-23271824 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
168
               

               
Alignm identity:
               
126
               

               
Alignm E-value:
               
3e-23
               

               
Alignm gaps (pig, cow):
               
86, 8
               

               
Conread position:
               
144-314
               

               
Cow position:
               
chr11:43965864-43965697 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
175
               

               
Alignm identity:
               
135
               

               
Alignm E-value:
               
2e-28
               

               
Alignm gaps (pig, cow):
               
111, 66
               

               
Conread position:
               
146-303
               

               
Cow position:
               
chr11:71390547-71390393 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
160
               

               
Alignm identity:
               
122
               

               
Alignm E-value:
               
5e-26
               

               
Alignm gaps (pig, cow):
               
8, 33
               

               
Conread position:
               
146-326
               

               
Cow position:
               
chr11:19508273-19508444 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
183
               

               
Alignm identity:
               
136
               

               
Alignm E-value:
               
1e-23
               

               
Alignm gaps (pig, cow):
               
50, 45
               

               
Conread position:
               
147-311
               

               
Cow position:
               
chr11:9270709-9270548 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
167
               

               
Alignm identity:
               
122
               

               
Alignm E-value:
               
3e-22
               

               
Alignm gaps (pig, cow):
               
96, 57
               

               
Conread position:
               
147-312
               

               
Cow position:
               
chr11:42160040-42159872 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
171
               

               
Alignm identity:
               
129
               

               
Alignm E-value:
               
2e-27
               

               
Alignm gaps (pig, cow):
               
84, 132
               

               
Conread position:
               
147-312
               

               
Cow position:
               
chr11:64048420-64048579 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
166
               

               
Alignm identity:
               
120
               

               
Alignm E-value:
               
9e-22
               

               
Alignm gaps (pig, cow):
               
76, 0
               

               
Conread position:
               
147-316
               

               
Cow position:
               
chr11:56114957-56115131 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
175
               

               
Alignm identity:
               
137
               

               
Alignm E-value:
               
1e-33
               

               
Alignm gaps (pig, cow):
               
81, 0
               

               
Conread position:
               
147-317
               

               
Cow position:
               
chr11:47724914-47725083 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
173
               

               
Alignm identity:
               
130
               

               
Alignm E-value:
               
6e-28
               

               
Alignm gaps (pig, cow):
               
96, 40
               

               
Conread position:
               
147-328
               

               
Cow position:
               
chr11:17721785-17721593 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
193
               

               
Alignm identity:
               
151
               

               
Alignm E-value:
               
4e-35
               

               
Alignm gaps (pig, cow):
               
85, 0
               

               
Conread position:
               
147-344
               

               
Cow position:
               
chr11:35153807-35153601 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
211
               

               
Alignm identity:
               
155
               

               
Alignm E-value:
               
4e-25
               

               
Alignm gaps (pig, cow):
               
83, 69
               

               
Conread position:
               
148-281
               

               
Cow position:
               
chr11:62081950-62081813 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
138
               

               
Alignm identity:
               
105
               

               
Alignm E-value:
               
3e-22
               

               
Alignm gaps (pig, cow):
               
80, 0
               

               
Conread position:
               
148-292
               

               
Cow position:
               
chr11:33289440-33289299 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
148
               

               
Alignm identity:
               
114
               

               
Alignm E-value:
               
1e-22
               

               
Alignm gaps (pig, cow):
               
98, 14
               

               
Conread position:
               
148-304
               

               
Cow position:
               
chr11:8422100-8421943 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
158
               

               
Alignm identity:
               
122
               

               
Alignm E-value:
               
8e-31
               

               
Alignm gaps (pig, cow):
               
84, 0
               

               
Conread position:
               
148-304
               

               
Cow position:
               
chr11:19500774-19500622 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
157
               

               
Alignm identity:
               
118
               

               
Alignm E-value:
               
1e-25
               

               
Alignm gaps (pig, cow):
               
71, 0
               

               
Conread position:
               
148-304
               

               
Cow position:
               
chr11:30986656-30986818 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
163
               

               
Alignm identity:
               
128
               

               
Alignm E-value:
               
2e-30
               

               
Alignm gaps (pig, cow):
               
80, 0
               

               
Conread position:
               
148-304
               

               
Cow position:
               
chr11:80819988-80819843 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
158
               

               
Alignm identity:
               
119
               

               
Alignm E-value:
               
8e-21
               

               
Alignm gaps (pig, cow):
               
7, 75
               

               
Conread position:
               
148-308
               

               
Cow position:
               
chr11:63483960-63484127 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
168
               

               
Alignm identity:
               
127
               

               
Alignm E-value:
               
1e-25
               

               
Alignm gaps (pig, cow):
               
80, 0
               

               
Conread position:
               
148-312
               

               
Cow position:
               
chr11:15607957-15607800 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
167
               

               
Alignm identity:
               
125
               

               
Alignm E-value:
               
3e-23
               

               
Alignm gaps (pig, cow):
               
9, 81
               

               
Conread position:
               
148-312
               

               
Cow position:
               
chr11:49152964-49153129 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
169
               

               
Alignm identity:
               
126
               

               
Alignm E-value:
               
4e-24
               

               
Alignm gaps (pig, cow):
               
7, 72
               

               
Conread position:
               
148-312
               

               
Cow position:
               
chr11:49872870-49872698 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
174
               

               
Alignm identity:
               
138
               

               
Alignm E-value:
               
3e-32
               

               
Alignm gaps (pig, cow):
               
76, 167
               

               
Conread position:
               
148-312
               

               
Cow position:
               
chr11:63382173-63382009 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
167
               

               
Alignm identity:
               
119
               

               
Alignm E-value:
               
8e-21
               

               
Alignm gaps (pig, cow):
               
95, 156
               

               
Conread position:
               
148-314
               

               
Cow position:
               
chr11:64334853-64335022 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
173
               

               
Alignm identity:
               
131
               

               
Alignm E-value:
               
5e-27
               

               
Alignm gaps (pig, cow):
               
18, 129
               

               
Conread position:
               
148-315
               

               
Cow position:
               
chr11:84764051-84764209 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
168
               

               
Alignm identity:
               
124
               

               
Alignm E-value:
               
3e-22
               

               
Alignm gaps (pig, cow):
               
7, 0
               

               
Conread position:
               
148-316
               

               
Cow position:
               
chr11:6194416-6194582 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
171
               

               
Alignm identity:
               
127
               

               
Alignm E-value:
               
4e-25
               

               
Alignm gaps (pig, cow):
               
94, 45
               

               
Conread position:
               
148-316
               

               
Cow position:
               
chr11:27405055-27404877 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
181
               

               
Alignm identity:
               
136
               

               
Alignm E-value:
               
1e-25
               

               
Alignm gaps (pig, cow):
               
82, 35
               

               
Conread position:
               
148-317
               

               
Cow position:
               
chr11:80923306-80923130 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
181
               

               
Alignm identity:
               
141
               

               
Alignm E-value:
               
7e-30
               

               
Alignm gaps (pig, cow):
               
95, 78
               

               
Conread position:
               
148-318
               

               
Cow position:
               
chr11:27248508-27248683 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
179
               

               
Alignm identity:
               
141
               

               
Alignm E-value:
               
1e-32
               

               
Alignm gaps (pig, cow):
               
94, 73
               

               
Conread position:
               
148-325
               

               
Cow position:
               
chr11:80556237-80556422 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
187
               

               
Alignm identity:
               
140
               

               
Alignm E-value:
               
6e-28
               

               
Alignm gaps (pig, cow):
               
87, 73
               

               
Conread position:
               
148-328
               

               
Cow position:
               
chr11:19890857-19891040 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
186
               

               
Alignm identity:
               
132
               

               
Alignm E-value:
               
3e-22
               

               
Alignm gaps (pig, cow):
               
80, 167
               

               
Conread position:
               
148-353
               

               
Cow position:
               
chr11:62663217-62663015 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
209
               

               
Alignm identity:
               
145
               

               
Alignm E-value:
               
1e-22
               

               
Alignm gaps (pig, cow):
               
95, 127
               

               
Conread position:
               
148-353
               

               
Cow position:
               
chr11:63499112-63498895 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
218
               

               
Alignm identity:
               
152
               

               
Alignm E-value:
               
1e-22
               

               
Alignm gaps (pig, cow):
               
82, 0
               

               
Conread position:
               
149-273
               

               
Cow position:
               
chr11:31410859-31410729 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
131
               

               
Alignm identity:
               
103
               

               
Alignm E-value:
               
9e-22
               

               
Alignm gaps (pig, cow):
               
79, 0
               

               
Conread position:
               
149-293
               

               
Cow position:
               
chr11:18543491-18543350 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
146
               

               
Alignm identity:
               
110
               

               
Alignm E-value:
               
9e-22
               

               
Alignm gaps (pig, cow):
               
91, 15
               

               
Conread position:
               
149-293
               

               
Cow position:
               
chr11:28993719-28993577 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
145
               

               
Alignm identity:
               
110
               

               
Alignm E-value:
               
1e-24
               

               
Alignm gaps (pig, cow):
               
40, 0
               

               
Conread position:
               
149-293
               

               
Cow position:
               
chr11:34467585-34467733 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
149
               

               
Alignm identity:
               
114
               

               
Alignm E-value:
               
1e-25
               

               
Alignm gaps (pig, cow):
               
73, 0
               

               
Conread position:
               
149-293
               

               
Cow position:
               
chr11:42296601-42296456 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
148
               

               
Alignm identity:
               
114
               

               
Alignm E-value:
               
4e-25
               

               
Alignm gaps (pig, cow):
               
89, 105
               

               
Conread position:
               
149-297
               

               
Cow position:
               
chr11:13043127-13042973 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
155
               

               
Alignm identity:
               
115
               

               
Alignm E-value:
               
9e-22
               

               
Alignm gaps (pig, cow):
               
79, 0
               

               
Conread position:
               
149-299
               

               
Cow position:
               
chr11:17036509-17036355 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
155
               

               
Alignm identity:
               
116
               

               
Alignm E-value:
               
1e-24
               

               
Alignm gaps (pig, cow):
               
91, 0
               

               
Conread position:
               
149-299
               

               
Cow position:
               
chr11:17083291-17083136 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
156
               

               
Alignm identity:
               
116
               

               
Alignm E-value:
               
1e-22
               

               
Alignm gaps (pig, cow):
               
83, 0
               

               
Conread position:
               
149-299
               

               
Cow position:
               
chr11:18910867-18910706 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
163
               

               
Alignm identity:
               
124
               

               
Alignm E-value:
               
3e-22
               

               
Alignm gaps (pig, cow):
               
15, 79
               

               
Conread position:
               
149-299
               

               
Cow position:
               
chr11:43360766-43360610 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
157
               

               
Alignm identity:
               
117
               

               
Alignm E-value:
               
1e-22
               

               
Alignm gaps (pig, cow):
               
8, 0
               

               
Conread position:
               
149-301
               

               
Cow position:
               
chr11:27661436-27661578 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
153
               

               
Alignm identity:
               
117
               

               
Alignm E-value:
               
9e-22
               

               
Alignm gaps (pig, cow):
               
61, 0
               

               
Conread position:
               
149-301
               

               
Cow position:
               
chr11:48544456-48544615 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
161
               

               
Alignm identity:
               
122
               

               
Alignm E-value:
               
4e-24
               

               
Alignm gaps (pig, cow):
               
43, 73
               

               
Conread position:
               
149-301
               

               
Cow position:
               
chr11:49149067-49149225 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
159
               

               
Alignm identity:
               
121
               

               
Alignm E-value:
               
1e-25
               

               
Alignm gaps (pig, cow):
               
12, 0
               

               
Conread position:
               
149-301
               

               
Cow position:
               
chr11:63484956-63485111 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
156
               

               
Alignm identity:
               
118
               

               
Alignm E-value:
               
2e-26
               

               
Alignm gaps (pig, cow):
               
92, 0
               

               
Conread position:
               
149-301
               

               
Cow position:
               
chr11:66104377-66104214 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
164
               

               
Alignm identity:
               
123
               

               
Alignm E-value:
               
9e-22
               

               
Alignm gaps (pig, cow):
               
21, 0
               

               
Conread position:
               
149-303
               

               
Cow position:
               
chr11:39060583-39060424 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
163
               

               
Alignm identity:
               
125
               

               
Alignm E-value:
               
1e-25
               

               
Alignm gaps (pig, cow):
               
96, 39
               

               
Conread position:
               
149-303
               

               
Cow position:
               
chr11:62742627-62742467 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
161
               

               
Alignm identity:
               
120
               

               
Alignm E-value:
               
4e-24
               

               
Alignm gaps (pig, cow):
               
79, 0
               

               
Conread position:
               
149-304
               

               
Cow position:
               
chr11:13684692-13684539 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
156
               

               
Alignm identity:
               
118
               

               
Alignm E-value:
               
5e-27
               

               
Alignm gaps (pig, cow):
               
90, 0
               

               
Conread position:
               
149-304
               

               
Cow position:
               
chr11:15285596-15285442 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
157
               

               
Alignm identity:
               
115
               

               
Alignm E-value:
               
3e-23
               

               
Alignm gaps (pig, cow):
               
110, 72
               

               
Conread position:
               
149-304
               

               
Cow position:
               
chr11:20205833-20205676 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
158
               

               
Alignm identity:
               
123
               

               
Alignm E-value:
               
8e-31
               

               
Alignm gaps (pig, cow):
               
79, 0
               

               
Conread position:
               
149-304
               

               
Cow position:
               
chr11:23407483-23407642 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
160
               

               
Alignm identity:
               
123
               

               
Alignm E-value:
               
7e-29
               

               
Alignm gaps (pig, cow):
               
79, 0
               

               
Conread position:
               
149-304
               

               
Cow position:
               
chr11:25119913-25119754 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
161
               

               
Alignm identity:
               
126
               

               
Alignm E-value:
               
2e-29
               

               
Alignm gaps (pig, cow):
               
74, 62
               

               
Conread position:
               
149-304
               

               
Cow position:
               
chr11:30830595-30830441 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
160
               

               
Alignm identity:
               
124
               

               
Alignm E-value:
               
5e-26
               

               
Alignm gaps (pig, cow):
               
79, 129
               

               
Conread position:
               
149-304
               

               
Cow position:
               
chr11:30843000-30842843 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
159
               

               
Alignm identity:
               
117
               

               
Alignm E-value:
               
3e-23
               

               
Alignm gaps (pig, cow):
               
83, 128
               

               
Conread position:
               
149-304
               

               
Cow position:
               
chr11:30894985-30894821 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
165
               

               
Alignm identity:
               
127
               

               
Alignm E-value:
               
2e-27
               

               
Alignm gaps (pig, cow):
               
75, 0
               

               
Conread position:
               
149-304
               

               
Cow position:
               
chr11:35580279-35580443 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
165
               

               
Alignm identity:
               
121
               

               
Alignm E-value:
               
9e-22
               

               
Alignm gaps (pig, cow):
               
82, 0
               

               
Conread position:
               
149-304
               

               
Cow position:
               
chr11:44032030-44032188 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
160
               

               
Alignm identity:
               
129
               

               
Alignm E-value:
               
3e-33
               

               
Alignm gaps (pig, cow):
               
79, 126
               

               
Conread position:
               
149-304
               

               
Cow position:
               
chr11:47899287-47899432 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
156
               

               
Alignm identity:
               
122
               

               
Alignm E-value:
               
2e-27
               

               
Alignm gaps (pig, cow):
               
73, 0
               

               
Conread position:
               
149-304
               

               
Cow position:
               
chr11:48247043-48246896 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
156
               

               
Alignm identity:
               
125
               

               
Alignm E-value:
               
2e-29
               

               
Alignm gaps (pig, cow):
               
78, 0
               

               
Conread position:
               
149-304
               

               
Cow position:
               
chr11:51196064-51195915 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
156
               

               
Alignm identity:
               
124
               

               
Alignm E-value:
               
8e-31
               

               
Alignm gaps (pig, cow):
               
72, 0
               

               
Conread position:
               
149-304
               

               
Cow position:
               
chr11:80586293-80586447 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
156
               

               
Alignm identity:
               
114
               

               
Alignm E-value:
               
4e-24
               

               
Alignm gaps (pig, cow):
               
147, 0
               

               
Conread position:
               
149-304
               

               
Cow position:
               
chr11:80639528-80639370 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
160
               

               
Alignm identity:
               
118
               

               
Alignm E-value:
               
1e-22
               

               
Alignm gaps (pig, cow):
               
79, 117
               

               
Conread position:
               
149-305
               

               
Cow position:
               
chr11:33409243-33409083 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
164
               

               
Alignm identity:
               
127
               

               
Alignm E-value:
               
2e-26
               

               
Alignm gaps (pig, cow):
               
73, 128
               

               
Conread position:
               
149-306
               

               
Cow position:
               
chr11:62812931-62812767 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
166
               

               
Alignm identity:
               
129
               

               
Alignm E-value:
               
5e-27
               

               
Alignm gaps (pig, cow):
               
79, 131
               

               
Conread position:
               
149-307
               

               
Cow position:
               
chr11:63999073-63998904 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
170
               

               
Alignm identity:
               
132
               

               
Alignm E-value:
               
2e-27
               

               
Alignm gaps (pig, cow):
               
78, 0
               

               
Conread position:
               
149-308
               

               
Cow position:
               
chr11:83032699-83032863 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
165
               

               
Alignm identity:
               
135
               

               
Alignm E-value:
               
5e-37
               

               
Alignm gaps (pig, cow):
               
71, 0
               

               
Conread position:
               
149-309
               

               
Cow position:
               
chr11:54872741-54872574 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
169
               

               
Alignm identity:
               
130
               

               
Alignm E-value:
               
5e-27
               

               
Alignm gaps (pig, cow):
               
43, 27
               

               
Conread position:
               
149-310
               

               
Cow position:
               
chr11:80296834-80296671 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
169
               

               
Alignm identity:
               
132
               

               
Alignm E-value:
               
6e-28
               

               
Alignm gaps (pig, cow):
               
63, 76
               

               
Conread position:
               
149-311
               

               
Cow position:
               
chr11:4637153-4636986 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
169
               

               
Alignm identity:
               
124
               

               
Alignm E-value:
               
1e-22
               

               
Alignm gaps (pig, cow):
               
79, 67
               

               
Conread position:
               
149-311
               

               
Cow position:
               
chr11:64105016-64105182 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
167
               

               
Alignm identity:
               
120
               

               
Alignm E-value:
               
3e-22
               

               
Alignm gaps (pig, cow):
               
57, 0
               

               
Conread position:
               
149-312
               

               
Cow position:
               
chr11:1485208-1485044 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
166
               

               
Alignm identity:
               
122
               

               
Alignm E-value:
               
1e-25
               

               
Alignm gaps (pig, cow):
               
94, 57
               

               
Conread position:
               
149-312
               

               
Cow position:
               
chr11:3175692-3175859 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
173
               

               
Alignm identity:
               
137
               

               
Alignm E-value:
               
2e-29
               

               
Alignm gaps (pig, cow):
               
91, 67
               

               
Conread position:
               
149-312
               

               
Cow position:
               
chr11:45631747-45631590 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
164
               

               
Alignm identity:
               
122
               

               
Alignm E-value:
               
1e-24
               

               
Alignm gaps (pig, cow):
               
75, 0
               

               
Conread position:
               
149-312
               

               
Cow position:
               
chr11:55052890-55053052 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
168
               

               
Alignm identity:
               
125
               

               
Alignm E-value:
               
1e-23
               

               
Alignm gaps (pig, cow):
               
91, 122
               

               
Conread position:
               
149-312
               

               
Cow position:
               
chr11:66041297-66041462 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
168
               

               
Alignm identity:
               
125
               

               
Alignm E-value:
               
1e-24
               

               
Alignm gaps (pig, cow):
               
85, 71
               

               
Conread position:
               
149-313
               

               
Cow position:
               
chr11:259153-258982 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
172
               

               
Alignm identity:
               
128
               

               
Alignm E-value:
               
1e-25
               

               
Alignm gaps (pig, cow):
               
80, 0
               

               
Conread position:
               
149-313
               

               
Cow position:
               
chr11:42206440-42206605 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
171
               

               
Alignm identity:
               
135
               

               
Alignm E-value:
               
7e-30
               

               
Alignm gaps (pig, cow):
               
79, 131
               

               
Conread position:
               
149-313
               

               
Cow position:
               
chr11:45435099-45435266 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
169
               

               
Alignm identity:
               
128
               

               
Alignm E-value:
               
6e-28
               

               
Alignm gaps (pig, cow):
               
103, 81
               

               
Conread position:
               
149-315
               

               
Cow position:
               
chr11:897692-897857 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
170
               

               
Alignm identity:
               
129
               

               
Alignm E-value:
               
6e-28
               

               
Alignm gaps (pig, cow):
               
94, 72
               

               
Conread position:
               
149-315
               

               
Cow position:
               
chr11:15772695-15772521 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
176
               

               
Alignm identity:
               
129
               

               
Alignm E-value:
               
3e-22
               

               
Alignm gaps (pig, cow):
               
79, 166
               

               
Conread position:
               
149-315
               

               
Cow position:
               
chr11:46922867-46922694 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
174
               

               
Alignm identity:
               
133
               

               
Alignm E-value:
               
7e-29
               

               
Alignm gaps (pig, cow):
               
60, 0
               

               
Conread position:
               
149-315
               

               
Cow position:
               
chr11:62620395-62620569 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
175
               

               
Alignm identity:
               
132
               

               
Alignm E-value:
               
6e-28
               

               
Alignm gaps (pig, cow):
               
78, 0
               

               
Conread position:
               
149-316
               

               
Cow position:
               
chr11:41196-41364 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
172
               

               
Alignm identity:
               
126
               

               
Alignm E-value:
               
1e-23
               

               
Alignm gaps (pig, cow):
               
22, 77
               

               
Conread position:
               
149-316
               

               
Cow position:
               
chr11:9699226-9699061 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
168
               

               
Alignm identity:
               
122
               

               
Alignm E-value:
               
1e-25
               

               
Alignm gaps (pig, cow):
               
75, 0
               

               
Conread position:
               
149-316
               

               
Cow position:
               
chr11:15591456-15591286 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
171
               

               
Alignm identity:
               
134
               

               
Alignm E-value:
               
1e-34
               

               
Alignm gaps (pig, cow):
               
83, 0
               

               
Conread position:
               
149-316
               

               
Cow position:
               
chr11:17227626-17227458 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
172
               

               
Alignm identity:
               
132
               

               
Alignm E-value:
               
7e-30
               

               
Alignm gaps (pig, cow):
               
94, 72
               

               
Conread position:
               
149-316
               

               
Cow position:
               
chr11:25721976-25721809 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
172
               

               
Alignm identity:
               
134
               

               
Alignm E-value:
               
2e-30
               

               
Alignm gaps (pig, cow):
               
78, 18
               

               
Conread position:
               
149-316
               

               
Cow position:
               
chr11:36092898-36092724 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
177
               

               
Alignm identity:
               
129
               

               
Alignm E-value:
               
3e-21
               

               
Alignm gaps (pig, cow):
               
16, 111
               

               
Conread position:
               
149-316
               

               
Cow position:
               
chr11:38211664-38211836 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
174
               

               
Alignm identity:
               
125
               

               
Alignm E-value:
               
8e-21
               

               
Alignm gaps (pig, cow):
               
80, 140
               

               
Conread position:
               
149-316
               

               
Cow position:
               
chr11:39462642-39462813 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
172
               

               
Alignm identity:
               
126
               

               
Alignm E-value:
               
1e-25
               

               
Alignm gaps (pig, cow):
               
79, 0
               

               
Conread position:
               
149-316
               

               
Cow position:
               
chr11:42083487-42083647 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
168
               

               
Alignm identity:
               
123
               

               
Alignm E-value:
               
1e-23
               

               
Alignm gaps (pig, cow):
               
74, 0
               

               
Conread position:
               
149-316
               

               
Cow position:
               
chr11:55494698-55494858 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
168
               

               
Alignm identity:
               
128
               

               
Alignm E-value:
               
2e-27
               

               
Alignm gaps (pig, cow):
               
78, 0
               

               
Conread position:
               
149-316
               

               
Cow position:
               
chr11:62789149-62789319 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
174
               

               
Alignm identity:
               
137
               

               
Alignm E-value:
               
3e-32
               

               
Alignm gaps (pig, cow):
               
90, 71
               

               
Conread position:
               
149-316
               

               
Cow position:
               
chr11:64044252-64044410 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
168
               

               
Alignm identity:
               
130
               

               
Alignm E-value:
               
2e-29
               

               
Alignm gaps (pig, cow):
               
75, 0
               

               
Conread position:
               
149-316
               

               
Cow position:
               
chr11:71022019-71022194 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
177
               

               
Alignm identity:
               
136
               

               
Alignm E-value:
               
2e-29
               

               
Alignm gaps (pig, cow):
               
84, 109
               

               
Conread position:
               
149-316
               

               
Cow position:
               
chr11:74839629-74839796 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
172
               

               
Alignm identity:
               
134
               

               
Alignm E-value:
               
8e-31
               

               
Alignm gaps (pig, cow):
               
91, 130
               

               
Conread position:
               
149-317
               

               
Cow position:
               
chr11:15017075-15017253 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
179
               

               
Alignm identity:
               
138
               

               
Alignm E-value:
               
2e-30
               

               
Alignm gaps (pig, cow):
               
72, 0
               

               
Conread position:
               
149-317
               

               
Cow position:
               
chr11:27746942-27747114 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
175
               

               
Alignm identity:
               
141
               

               
Alignm E-value:
               
1e-35
               

               
Alignm gaps (pig, cow):
               
86, 75
               

               
Conread position:
               
149-317
               

               
Cow position:
               
chr11:44222904-44223076 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
176
               

               
Alignm identity:
               
132
               

               
Alignm E-value:
               
1e-25
               

               
Alignm gaps (pig, cow):
               
78, 132
               

               
Conread position:
               
149-317
               

               
Cow position:
               
chr11:52297202-52297027 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
176
               

               
Alignm identity:
               
140
               

               
Alignm E-value:
               
4e-35
               

               
Alignm gaps (pig, cow):
               
76, 0
               

               
Conread position:
               
149-317
               

               
Cow position:
               
chr11:63165628-63165455 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
174
               

               
Alignm identity:
               
136
               

               
Alignm E-value:
               
1e-32
               

               
Alignm gaps (pig, cow):
               
79, 0
               

               
Conread position:
               
149-317
               

               
Cow position:
               
chr11:63866641-63866461 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
181
               

               
Alignm identity:
               
135
               

               
Alignm E-value:
               
4e-24
               

               
Alignm gaps (pig, cow):
               
51, 0
               

               
Conread position:
               
149-317
               

               
Cow position:
               
chr11:67948723-67948563 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
169
               

               
Alignm identity:
               
131
               

               
Alignm E-value:
               
2e-28
               

               
Alignm gaps (pig, cow):
               
82, 0
               

               
Conread position:
               
149-318
               

               
Cow position:
               
chr11:13061217-13061056 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
173
               

               
Alignm identity:
               
131
               

               
Alignm E-value:
               
4e-24
               

               
Alignm gaps (pig, cow):
               
61, 76
               

               
Conread position:
               
149-318
               

               
Cow position:
               
chr11:83043344-83043171 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
174
               

               
Alignm identity:
               
143
               

               
Alignm E-value:
               
2e-40
               

               
Alignm gaps (pig, cow):
               
79, 0
               

               
Conread position:
               
149-324
               

               
Cow position:
               
chr11:16342210-16342049 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
176
               

               
Alignm identity:
               
135
               

               
Alignm E-value:
               
2e-27
               

               
Alignm gaps (pig, cow):
               
88, 0
               

               
Conread position:
               
149-325
               

               
Cow position:
               
chr11:14470384-14470564 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
181
               

               
Alignm identity:
               
126
               

               
Alignm E-value:
               
3e-21
               

               
Alignm gaps (pig, cow):
               
79, 0
               

               
Conread position:
               
149-325
               

               
Cow position:
               
chr11:30192197-30192381 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
188
               

               
Alignm identity:
               
141
               

               
Alignm E-value:
               
1e-25
               

               
Alignm gaps (pig, cow):
               
79, 133
               

               
Conread position:
               
149-326
               

               
Cow position:
               
chr11:30172323-30172505 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
183
               

               
Alignm identity:
               
141
               

               
Alignm E-value:
               
1e-33
               

               
Alignm gaps (pig, cow):
               
83, 0
               

               
Conread position:
               
149-326
               

               
Cow position:
               
chr11:31227981-31228158 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
183
               

               
Alignm identity:
               
138
               

               
Alignm E-value:
               
5e-27
               

               
Alignm gaps (pig, cow):
               
78, 115
               

               
Conread position:
               
149-326
               

               
Cow position:
               
chr11:77241723-77241905 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
184
               

               
Alignm identity:
               
134
               

               
Alignm E-value:
               
1e-25
               

               
Alignm gaps (pig, cow):
               
79, 163
               

               
Conread position:
               
149-328
               

               
Cow position:
               
chr11:35669933-35669763 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
181
               

               
Alignm identity:
               
133
               

               
Alignm E-value:
               
1e-22
               

               
Alignm gaps (pig, cow):
               
126, 39
               

               
Conread position:
               
149-328
               

               
Cow position:
               
chr11:67614903-67614719 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
185
               

               
Alignm identity:
               
138
               

               
Alignm E-value:
               
2e-30
               

               
Alignm gaps (pig, cow):
               
81, 0
               

               
Conread position:
               
149-336
               

               
Cow position:
               
chr11:15366954-15366767 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
193
               

               
Alignm identity:
               
140
               

               
Alignm E-value:
               
4e-25
               

               
Alignm gaps (pig, cow):
               
92, 75
               

               
Conread position:
               
149-336
               

               
Cow position:
               
chr11:67615227-67615041 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
194
               

               
Alignm identity:
               
146
               

               
Alignm E-value:
               
2e-27
               

               
Alignm gaps (pig, cow):
               
79, 8
               

               
Conread position:
               
149-350
               

               
Cow position:
               
chr11:5176358-5176153 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
206
               

               
Alignm identity:
               
142
               

               
Alignm E-value:
               
4e-25
               

               
Alignm gaps (pig, cow):
               
93, 0
               

               
Conread position:
               
149-351
               

               
Cow position:
               
chr11:21844118-21843909 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
212
               

               
Alignm identity:
               
147
               

               
Alignm E-value:
               
3e-22
               

               
Alignm gaps (pig, cow):
               
93, 30
               

               
Conread position:
               
149-353
               

               
Cow position:
               
chr11:77017260-77017464 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
208
               

               
Alignm identity:
               
145
               

               
Alignm E-value:
               
1e-25
               

               
Alignm gaps (pig, cow):
               
154, 57
               

               
Conread position:
               
149-357
               

               
Cow position:
               
chr11:1932473-1932254 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
222
               

               
Alignm identity:
               
160
               

               
Alignm E-value:
               
2e-27
               

               
Alignm gaps (pig, cow):
               
38, 169
               

               
Conread position:
               
149-362
               

               
Cow position:
               
chr11:7617188-7616972 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
221
               

               
Alignm identity:
               
158
               

               
Alignm E-value:
               
2e-27
               

               
Alignm gaps (pig, cow):
               
17, 156
               

               
Conread position:
               
149-363
               

               
Cow position:
               
chr11:52380853-52380636 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
224
               

               
Alignm identity:
               
162
               

               
Alignm E-value:
               
6e-28
               

               
Alignm gaps (pig, cow):
               
79, 164
               

               
Conread position:
               
149-366
               

               
Cow position:
               
chr11:62239763-62239986 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
228
               

               
Alignm identity:
               
169
               

               
Alignm E-value:
               
1e-32
               

               
Alignm gaps (pig, cow):
               
96, 72
               

               
Conread position:
               
150-304
               

               
Cow position:
               
chr11:2917566-2917411 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
159
               

               
Alignm identity:
               
123
               

               
Alignm E-value:
               
5e-27
               

               
Alignm gaps (pig, cow):
               
90, 48
               

               
Conread position:
               
150-304
               

               
Cow position:
               
chr11:29960315-29960474 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
163
               

               
Alignm identity:
               
128
               

               
Alignm E-value:
               
2e-28
               

               
Alignm gaps (pig, cow):
               
93, 71
               

               
Conread position:
               
150-311
               

               
Cow position:
               
chr11:65495320-65495155 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
166
               

               
Alignm identity:
               
120
               

               
Alignm E-value:
               
1e-22
               

               
Alignm gaps (pig, cow):
               
78, 0
               

               
Conread position:
               
150-316
               

               
Cow position:
               
chr11:4411849-4411679 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
172
               

               
Alignm identity:
               
126
               

               
Alignm E-value:
               
4e-24
               

               
Alignm gaps (pig, cow):
               
81, 146
               

               
Conread position:
               
150-316
               

               
Cow position:
               
chr11:48296050-48296217 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
172
               

               
Alignm identity:
               
132
               

               
Alignm E-value:
               
6e-28
               

               
Alignm gaps (pig, cow):
               
102, 71
               

               
Conread position:
               
150-316
               

               
Cow position:
               
chr11:83249422-83249589 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
172
               

               
Alignm identity:
               
125
               

               
Alignm E-value:
               
8e-21
               

               
Alignm gaps (pig, cow):
               
78, 128
               

               
Conread position:
               
150-325
               

               
Cow position:
               
chr11:5483-5655 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
177
               

               
Alignm identity:
               
125
               

               
Alignm E-value:
               
3e-21
               

               
Alignm gaps (pig, cow):
               
122, 88
               

               
Conread position:
               
150-349
               

               
Cow position:
               
chr11:36182714-36182919 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
207
               

               
Alignm identity:
               
153
               

               
Alignm E-value:
               
3e-31
               

               
Alignm gaps (pig, cow):
               
72, 118
               

               
Conread position:
               
150-360
               

               
Cow position:
               
chr11:44615148-44614928 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
221
               

               
Alignm identity:
               
156
               

               
Alignm E-value:
               
2e-26
               

               
Alignm gaps (pig, cow):
               
22, 0
               

               
Conread position:
               
151-282
               

               
Cow position:
               
chr11:39499377-39499515 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
140
               

               
Alignm identity:
               
108
               

               
Alignm E-value:
               
3e-21
               

               
Alignm gaps (pig, cow):
               
90, 64
               

               
Conread position:
               
151-292
               

               
Cow position:
               
chr11:18851929-18852073 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
146
               

               
Alignm identity:
               
110
               

               
Alignm E-value:
               
1e-22
               

               
Alignm gaps (pig, cow):
               
94, 25
               

               
Conread position:
               
151-301
               

               
Cow position:
               
chr11:21728255-21728110 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
152
               

               
Alignm identity:
               
119
               

               
Alignm E-value:
               
5e-27
               

               
Alignm gaps (pig, cow):
               
81, 30
               

               
Conread position:
               
151-304
               

               
Cow position:
               
chr11:50152793-50152631 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
163
               

               
Alignm identity:
               
123
               

               
Alignm E-value:
               
1e-24
               

               
Alignm gaps (pig, cow):
               
76, 0
               

               
Conread position:
               
151-304
               

               
Cow position:
               
chr11:65157387-65157223 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
165
               

               
Alignm identity:
               
124
               

               
Alignm E-value:
               
1e-23
               

               
Alignm gaps (pig, cow):
               
75, 0
               

               
Conread position:
               
151-305
               

               
Cow position:
               
chr11:4621410-4621252 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
159
               

               
Alignm identity:
               
120
               

               
Alignm E-value:
               
5e-27
               

               
Alignm gaps (pig, cow):
               
92, 0
               

               
Conread position:
               
151-307
               

               
Cow position:
               
chr11:20238697-20238861 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
165
               

               
Alignm identity:
               
131
               

               
Alignm E-value:
               
3e-32
               

               
Alignm gaps (pig, cow):
               
90, 0
               

               
Conread position:
               
151-310
               

               
Cow position:
               
chr11:17676352-17676187 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
166
               

               
Alignm identity:
               
125
               

               
Alignm E-value:
               
2e-26
               

               
Alignm gaps (pig, cow):
               
77, 0
               

               
Conread position:
               
151-310
               

               
Cow position:
               
chr11:51729307-51729462 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
160
               

               
Alignm identity:
               
129
               

               
Alignm E-value:
               
1e-34
               

               
Alignm gaps (pig, cow):
               
73, 0
               

               
Conread position:
               
151-311
               

               
Cow position:
               
chr11:38223767-38223604 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
165
               

               
Alignm identity:
               
121
               

               
Alignm E-value:
               
1e-23
               

               
Alignm gaps (pig, cow):
               
69, 47
               

               
Conread position:
               
151-316
               

               
Cow position:
               
chr11:66685885-66685718 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
170
               

               
Alignm identity:
               
124
               

               
Alignm E-value:
               
3e-23
               

               
Alignm gaps (pig, cow):
               
13, 158
               

               
Conread position:
               
151-317
               

               
Cow position:
               
chr11:48315376-48315204 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
173
               

               
Alignm identity:
               
126
               

               
Alignm E-value:
               
1e-23
               

               
Alignm gaps (pig, cow):
               
77, 0
               

               
Conread position:
               
151-317
               

               
Cow position:
               
chr11:75874734-75874578 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
167
               

               
Alignm identity:
               
130
               

               
Alignm E-value:
               
2e-28
               

               
Alignm gaps (pig, cow):
               
65, 0
               

               
Conread position:
               
151-321
               

               
Cow position:
               
chr11:30867204-30867378 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
175
               

               
Alignm identity:
               
128
               

               
Alignm E-value:
               
1e-25
               

               
Alignm gaps (pig, cow):
               
77, 0
               

               
Conread position:
               
151-325
               

               
Cow position:
               
chr11:40818606-40818431 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
178
               

               
Alignm identity:
               
138
               

               
Alignm E-value:
               
3e-33
               

               
Alignm gaps (pig, cow):
               
81, 146
               

               
Conread position:
               
151-362
               

               
Cow position:
               
chr11:33369171-33369391 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
223
               

               
Alignm identity:
               
153
               

               
Alignm E-value:
               
8e-21
               

               
Alignm gaps (pig, cow):
               
77, 197
               

               
Conread position:
               
152-315
               

               
Cow position:
               
chr11:1625202-1625028 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
176
               

               
Alignm identity:
               
132
               

               
Alignm E-value:
               
4e-24
               

               
Alignm gaps (pig, cow):
               
78, 51
               

               
Conread position:
               
152-316
               

               
Cow position:
               
chr11:69977992-69978159 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
171
               

               
Alignm identity:
               
126
               

               
Alignm E-value:
               
1e-22
               

               
Alignm gaps (pig, cow):
               
75, 128
               

               
Conread position:
               
153-304
               

               
Cow position:
               
chr11:18447469-18447319 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
152
               

               
Alignm identity:
               
115
               

               
Alignm E-value:
               
5e-27
               

               
Alignm gaps (pig, cow):
               
76, 0
               

               
Conread position:
               
153-322
               

               
Cow position:
               
chr11:35536609-35536775 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
170
               

               
Alignm identity:
               
120
               

               
Alignm E-value:
               
9e-22
               

               
Alignm gaps (pig, cow):
               
91, 0
               

               
Conread position:
               
155-308
               

               
Cow position:
               
chr11:74316734-74316892 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
160
               

               
Alignm identity:
               
124
               

               
Alignm E-value:
               
2e-27
               

               
Alignm gaps (pig, cow):
               
83, 53
               

               
Conread position:
               
155-310
               

               
Cow position:
               
chr11:2484771-2484608 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
166
               

               
Alignm identity:
               
127
               

               
Alignm E-value:
               
1e-24
               

               
Alignm gaps (pig, cow):
               
86, 66
               

               
Conread position:
               
155-314
               

               
Cow position:
               
chr11:48085947-48086108 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
166
               

               
Alignm identity:
               
123
               

               
Alignm E-value:
               
9e-22
               

               
Alignm gaps (pig, cow):
               
72, 12
               

               
Conread position:
               
155-316
               

               
Cow position:
               
chr11:40608570-40608399 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
172
               

               
Alignm identity:
               
130
               

               
Alignm E-value:
               
1e-25
               

               
Alignm gaps (pig, cow):
               
67, 0
               

               
Conread position:
               
156-312
               

               
Cow position:
               
chr11:49057417-49057573 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
157
               

               
Alignm identity:
               
120
               

               
Alignm E-value:
               
2e-30
               

               
Alignm gaps (pig, cow):
               
0, 0
               

               
Conread position:
               
157-311
               

               
Cow position:
               
chr11:75915020-75915174 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
156
               

               
Alignm identity:
               
112
               

               
Alignm E-value:
               
3e-21
               

               
Alignm gaps (pig, cow):
               
75, 140
               

               
Conread position:
               
157-316
               

               
Cow position:
               
chr11:17559157-17559310 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
161
               

               
Alignm identity:
               
120
               

               
Alignm E-value:
               
9e-22
               

               
Alignm gaps (pig, cow):
               
149, 51
               

               
Conread position:
               
157-317
               

               
Cow position:
               
chr11:58185909-58186068 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
162
               

               
Alignm identity:
               
128
               

               
Alignm E-value:
               
3e-33
               

               
Alignm gaps (pig, cow):
               
154, 73
               

               
Conread position:
               
157-325
               

               
Cow position:
               
chr11:77013807-77013972 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
170
               

               
Alignm identity:
               
124
               

               
Alignm E-value:
               
1e-23
               

               
Alignm gaps (pig, cow):
               
157, 51
               

               
Conread position:
               
157-327
               

               
Cow position:
               
chr11:40395466-40395643 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
178
               

               
Alignm identity:
               
128
               

               
Alignm E-value:
               
1e-22
               

               
Alignm gaps (pig, cow):
               
74, 0
               

               
Conread position:
               
157-342
               

               
Cow position:
               
chr11:77227565-77227751 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
189
               

               
Alignm identity:
               
139
               

               
Alignm E-value:
               
7e-29
               

               
Alignm gaps (pig, cow):
               
86, 62
               

               
Conread position:
               
159-309
               

               
Cow position:
               
chr11:18698908-18699057 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
151
               

               
Alignm identity:
               
111
               

               
Alignm E-value:
               
1e-23
               

               
Alignm gaps (pig, cow):
               
73, 0
               

               
Conread position:
               
159-312
               

               
Cow position:
               
chr11:46784502-46784655 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
156
               

               
Alignm identity:
               
116
               

               
Alignm E-value:
               
1e-23
               

               
Alignm gaps (pig, cow):
               
144, 80
               

               
Conread position:
               
160-314
               

               
Cow position:
               
chr11:17369560-17369717 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
159
               

               
Alignm identity:
               
122
               

               
Alignm E-value:
               
5e-27
               

               
Alignm gaps (pig, cow):
               
68, 150
               

               
Conread position:
               
160-316
               

               
Cow position:
               
chr11:81340511-81340349 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
163
               

               
Alignm identity:
               
136
               

               
Alignm E-value:
               
2e-38
               

               
Alignm gaps (pig, cow):
               
70, 0
               

               
Conread position:
               
161-304
               

               
Cow position:
               
chr11:12768429-12768578 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
150
               

               
Alignm identity:
               
112
               

               
Alignm E-value:
               
9e-22
               

               
Alignm gaps (pig, cow):
               
71, 0
               

               
Conread position:
               
161-325
               

               
Cow position:
               
chr11:63478403-63478567 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
167
               

               
Alignm identity:
               
134
               

               
Alignm E-value:
               
5e-36
               

               
Alignm gaps (pig, cow):
               
148, 63
               

               
Conread position:
               
163-312
               

               
Cow position:
               
chr11:57170566-57170420 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
150
               

               
Alignm identity:
               
113
               

               
Alignm E-value:
               
4e-25
               

               
Alignm gaps (pig, cow):
               
53, 0
               

               
Conread position:
               
163-325
               

               
Cow position:
               
chr11:2937631-2937466 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
168
               

               
Alignm identity:
               
123
               

               
Alignm E-value:
               
1e-22
               

               
Alignm gaps (pig, cow):
               
80, 61
               

               
Conread position:
               
164-307
               

               
Cow position:
               
chr11:73637888-73638040 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
154
               

               
Alignm identity:
               
118
               

               
Alignm E-value:
               
9e-22
               

               
Alignm gaps (pig, cow):
               
63, 24
               

               
Conread position:
               
164-316
               

               
Cow position:
               
chr11:2925267-2925114 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
157
               

               
Alignm identity:
               
119
               

               
Alignm E-value:
               
1e-24
               

               
Alignm gaps (pig, cow):
               
79, 60
               

               
Conread position:
               
164-316
               

               
Cow position:
               
chr11:4653221-4653068 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
157
               

               
Alignm identity:
               
120
               

               
Alignm E-value:
               
4e-25
               

               
Alignm gaps (pig, cow):
               
64, 114
               

               
Conread position:
               
165-316
               

               
Cow position:
               
chr11:33824871-33824722 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
154
               

               
Alignm identity:
               
118
               

               
Alignm E-value:
               
1e-24
               

               
Alignm gaps (pig, cow):
               
63, 46
               

               
Conread position:
               
166-304
               

               
Cow position:
               
chr11:63038398-63038534 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
139
               

               
Alignm identity:
               
104
               

               
Alignm E-value:
               
9e-22
               

               
Alignm gaps (pig, cow):
               
12, 0
               

               
Conread position:
               
166-307
               

               
Cow position:
               
chr11:49568196-49568051 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
148
               

               
Alignm identity:
               
119
               

               
Alignm E-value:
               
6e-28
               

               
Alignm gaps (pig, cow):
               
76, 59
               

               
Conread position:
               
167-300
               

               
Cow position:
               
chr11:1842000-1842135 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
136
               

               
Alignm identity:
               
106
               

               
Alignm E-value:
               
1e-25
               

               
Alignm gaps (pig, cow):
               
76, 0
               

               
Conread position:
               
167-312
               

               
Cow position:
               
chr11:28078530-28078679 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
150
               

               
Alignm identity:
               
114
               

               
Alignm E-value:
               
1e-24
               

               
Alignm gaps (pig, cow):
               
61, 0
               

               
Conread position:
               
167-315
               

               
Cow position:
               
chr11:45671333-45671188 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
149
               

               
Alignm identity:
               
110
               

               
Alignm E-value:
               
3e-22
               

               
Alignm gaps (pig, cow):
               
67, 0
               

               
Conread position:
               
167-316
               

               
Cow position:
               
chr11:18484152-18484007 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
150
               

               
Alignm identity:
               
111
               

               
Alignm E-value:
               
1e-22
               

               
Alignm gaps (pig, cow):
               
55, 0
               

               
Conread position:
               
169-311
               

               
Cow position:
               
chr11:67600823-67600966 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
145
               

               
Alignm identity:
               
109
               

               
Alignm E-value:
               
3e-23
               

               
Alignm gaps (pig, cow):
               
74, 139
               

               
Conread position:
               
171-316
               

               
Cow position:
               
chr11:62655734-62655885 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
154
               

               
Alignm identity:
               
119
               

               
Alignm E-value:
               
1e-24
               

               
Alignm gaps (pig, cow):
               
81, 50
               

               
Conread position:
               
172-307
               

               
Cow position:
               
chr11:65431560-65431702 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
144
               

               
Alignm identity:
               
114
               

               
Alignm E-value:
               
4e-25
               

               
Alignm gaps (pig, cow):
               
70, 53
               

               
Conread position:
               
172-316
               

               
Cow position:
               
chr11:4602194-4602348 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
155
               

               
Alignm identity:
               
119
               

               
Alignm E-value:
               
1e-22
               

               
Alignm gaps (pig, cow):
               
56, 0
               

               
Conread position:
               
173-346
               

               
Cow position:
               
chr11:6784251-6784429 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
183
               

               
Alignm identity:
               
134
               

               
Alignm E-value:
               
3e-21
               

               
Alignm gaps (pig, cow):
               
55, 31
               

               
Conread position:
               
174-316
               

               
Cow position:
               
chr11:63977101-63977249 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
149
               

               
Alignm identity:
               
115
               

               
Alignm E-value:
               
1e-24
               

               
Alignm gaps (pig, cow):
               
54, 0
               

               
Conread position:
               
175-315
               

               
Cow position:
               
chr11:32587079-32586930 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
150
               

               
Alignm identity:
               
117
               

               
Alignm E-value:
               
4e-24
               

               
Alignm gaps (pig, cow):
               
52, 0
               

               
Conread position:
               
177-312
               

               
Cow position:
               
chr11:20093699-20093836 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
141
               

               
Alignm identity:
               
109
               

               
Alignm E-value:
               
3e-21
               

               
Alignm gaps (pig, cow):
               
17, 40
               

               
Conread position:
               
177-316
               

               
Cow position:
               
chr11:38739060-38738915 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
146
               

               
Alignm identity:
               
110
               

               
Alignm E-value:
               
3e-21
               

               
Alignm gaps (pig, cow):
               
49, 0
               

               
Conread position:
               
186-310
               

               
Cow position:
               
chr11:34233502-34233632 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
131
               

               
Alignm identity:
               
104
               

               
Alignm E-value:
               
1e-22
               

               
Alignm gaps (pig, cow):
               
44, 0
               

               
Conread position:
               
186-311
               

               
Cow position:
               
chr11:58669137-58669258 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
126
               

               
Alignm identity:
               
98
               

               
Alignm E-value:
               
8e-21
               

               
Alignm gaps (pig, cow):
               
47, 0
               

               
Conread position:
               
186-316
               

               
Cow position:
               
chr11:32787142-32787013 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
131
               

               
Alignm identity:
               
102
               

               
Alignm E-value:
               
1e-24
               

               
Alignm gaps (pig, cow):
               
44, 0
               

               
Conread position:
               
192-345
               

               
Cow position:
               
chr11:73076353-73076200 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
155
               

               
Alignm identity:
               
125
               

               
Alignm E-value:
               
4e-34
               

               
Alignm gaps (pig, cow):
               
52, 115
               

               
Conread position:
               
195-316
               

               
Cow position:
               
chr11:80823974-80824096 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
124
               

               
Alignm identity:
               
98
               

               
Alignm E-value:
               
3e-22
               

               
Alignm gaps (pig, cow):
               
33, 113
               

               
Conread position:
               
198-312
               

               
Cow position:
               
chr11:6638931-6638812 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
120
               

               
Alignm identity:
               
98
               

               
Alignm E-value:
               
1e-22
               

               
Alignm gaps (pig, cow):
               
32, 0
               

               
Conread position:
               
206-334
               

               
Cow position:
               
chr11:36520965-36521092 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
129
               

               
Alignm identity:
               
97
               

               
Alignm E-value:
               
8e-21
               

               
Alignm gaps (pig, cow):
               
14, 0
               

               
Conread position:
               
215-316
               

               
Cow position:
               
chr11:36128583-36128682 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
102
               

               
Alignm identity:
               
84
               

               
Alignm E-value:
               
8e-21
               

               
Alignm gaps (pig, cow):
               
88, 0
               
Show alignments to all cow chromosomes.