Cow genome map
| Conread name: | Utr1-UTR01B050090 |
| Conread position: | 117-351 |
| Cow position: | chr26:21279936-21279706 (view UCSC Genome Browser custom track) |
| Alignm length: | 242 |
| Alignm identity: | 169 |
| Alignm E-value: | 5e-24 |
| Alignm gaps (pig, cow): | 100, 23 |
| Conread position: | 121-314 |
| Cow position: | chr26:647703-647497 (view UCSC Genome Browser custom track) |
| Alignm length: | 207 |
| Alignm identity: | 153 |
| Alignm E-value: | 3e-29 |
| Alignm gaps (pig, cow): | 15, 0 |
| Conread position: | 122-293 |
| Cow position: | chr26:22176668-22176835 (view UCSC Genome Browser custom track) |
| Alignm length: | 173 |
| Alignm identity: | 133 |
| Alignm E-value: | 3e-30 |
| Alignm gaps (pig, cow): | 35, 15 |
| Conread position: | 125-288 |
| Cow position: | chr26:29897217-29897382 (view UCSC Genome Browser custom track) |
| Alignm length: | 170 |
| Alignm identity: | 130 |
| Alignm E-value: | 2e-26 |
| Alignm gaps (pig, cow): | 103, 22 |
| Conread position: | 135-316 |
| Cow position: | chr26:9535556-9535741 (view UCSC Genome Browser custom track) |
| Alignm length: | 188 |
| Alignm identity: | 144 |
| Alignm E-value: | 1e-31 |
| Alignm gaps (pig, cow): | 17, 49 |
| Conread position: | 136-316 |
| Cow position: | chr26:12891928-12891745 (view UCSC Genome Browser custom track) |
| Alignm length: | 187 |
| Alignm identity: | 136 |
| Alignm E-value: | 5e-25 |
| Alignm gaps (pig, cow): | 91, 26 |
| Conread position: | 147-315 |
| Cow position: | chr26:8341546-8341709 (view UCSC Genome Browser custom track) |
| Alignm length: | 170 |
| Alignm identity: | 132 |
| Alignm E-value: | 3e-30 |
| Alignm gaps (pig, cow): | 10, 39 |
| Conread position: | 148-295 |
| Cow position: | chr26:29889462-29889309 (view UCSC Genome Browser custom track) |
| Alignm length: | 156 |
| Alignm identity: | 119 |
| Alignm E-value: | 5e-24 |
| Alignm gaps (pig, cow): | 90, 73 |
| Conread position: | 148-304 |
| Cow position: | chr26:13862985-13862824 (view UCSC Genome Browser custom track) |
| Alignm length: | 163 |
| Alignm identity: | 130 |
| Alignm E-value: | 3e-31 |
| Alignm gaps (pig, cow): | 80, 55 |
| Conread position: | 148-305 |
| Cow position: | chr26:16783878-16784042 (view UCSC Genome Browser custom track) |
| Alignm length: | 165 |
| Alignm identity: | 134 |
| Alignm E-value: | 2e-34 |
| Alignm gaps (pig, cow): | 70, 0 |
| Conread position: | 148-305 |
| Cow position: | chr26:26950403-26950246 (view UCSC Genome Browser custom track) |
| Alignm length: | 160 |
| Alignm identity: | 119 |
| Alignm E-value: | 5e-25 |
| Alignm gaps (pig, cow): | 89, 59 |
| Conread position: | 148-307 |
| Cow position: | chr26:34724823-34724657 (view UCSC Genome Browser custom track) |
| Alignm length: | 167 |
| Alignm identity: | 125 |
| Alignm E-value: | 6e-26 |
| Alignm gaps (pig, cow): | 81, 0 |
| Conread position: | 148-311 |
| Cow position: | chr26:31137415-31137245 (view UCSC Genome Browser custom track) |
| Alignm length: | 172 |
| Alignm identity: | 136 |
| Alignm E-value: | 1e-30 |
| Alignm gaps (pig, cow): | 41, 166 |
| Conread position: | 148-312 |
| Cow position: | chr26:9099480-9099311 (view UCSC Genome Browser custom track) |
| Alignm length: | 170 |
| Alignm identity: | 127 |
| Alignm E-value: | 2e-27 |
| Alignm gaps (pig, cow): | 84, 0 |
| Conread position: | 148-313 |
| Cow position: | chr26:9491974-9492142 (view UCSC Genome Browser custom track) |
| Alignm length: | 169 |
| Alignm identity: | 129 |
| Alignm E-value: | 3e-31 |
| Alignm gaps (pig, cow): | 80, 0 |
| Conread position: | 149-292 |
| Cow position: | chr26:13802164-13802311 (view UCSC Genome Browser custom track) |
| Alignm length: | 148 |
| Alignm identity: | 113 |
| Alignm E-value: | 2e-25 |
| Alignm gaps (pig, cow): | 91, 0 |
| Conread position: | 149-301 |
| Cow position: | chr26:14032380-14032238 (view UCSC Genome Browser custom track) |
| Alignm length: | 153 |
| Alignm identity: | 117 |
| Alignm E-value: | 2e-24 |
| Alignm gaps (pig, cow): | 73, 0 |
| Conread position: | 149-301 |
| Cow position: | chr26:16585488-16585639 (view UCSC Genome Browser custom track) |
| Alignm length: | 153 |
| Alignm identity: | 121 |
| Alignm E-value: | 1e-32 |
| Alignm gaps (pig, cow): | 83, 0 |
| Conread position: | 149-304 |
| Cow position: | chr26:5666101-5666255 (view UCSC Genome Browser custom track) |
| Alignm length: | 157 |
| Alignm identity: | 118 |
| Alignm E-value: | 6e-26 |
| Alignm gaps (pig, cow): | 41, 121 |
| Conread position: | 149-304 |
| Cow position: | chr26:5836767-5836603 (view UCSC Genome Browser custom track) |
| Alignm length: | 165 |
| Alignm identity: | 129 |
| Alignm E-value: | 9e-30 |
| Alignm gaps (pig, cow): | 80, 0 |
| Conread position: | 149-304 |
| Cow position: | chr26:9604615-9604770 (view UCSC Genome Browser custom track) |
| Alignm length: | 159 |
| Alignm identity: | 117 |
| Alignm E-value: | 1e-21 |
| Alignm gaps (pig, cow): | 83, 61 |
| Conread position: | 149-304 |
| Cow position: | chr26:20769904-20770065 (view UCSC Genome Browser custom track) |
| Alignm length: | 164 |
| Alignm identity: | 129 |
| Alignm E-value: | 3e-29 |
| Alignm gaps (pig, cow): | 90, 75 |
| Conread position: | 149-304 |
| Cow position: | chr26:22892392-22892233 (view UCSC Genome Browser custom track) |
| Alignm length: | 160 |
| Alignm identity: | 121 |
| Alignm E-value: | 6e-27 |
| Alignm gaps (pig, cow): | 79, 0 |
| Conread position: | 149-307 |
| Cow position: | chr26:6514896-6515051 (view UCSC Genome Browser custom track) |
| Alignm length: | 160 |
| Alignm identity: | 124 |
| Alignm E-value: | 3e-29 |
| Alignm gaps (pig, cow): | 155, 78 |
| Conread position: | 149-307 |
| Cow position: | chr26:8307475-8307314 (view UCSC Genome Browser custom track) |
| Alignm length: | 162 |
| Alignm identity: | 117 |
| Alignm E-value: | 1e-23 |
| Alignm gaps (pig, cow): | 106, 0 |
| Conread position: | 149-307 |
| Cow position: | chr26:23924903-23925061 (view UCSC Genome Browser custom track) |
| Alignm length: | 159 |
| Alignm identity: | 120 |
| Alignm E-value: | 9e-30 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 149-311 |
| Cow position: | chr26:20291639-20291473 (view UCSC Genome Browser custom track) |
| Alignm length: | 169 |
| Alignm identity: | 135 |
| Alignm E-value: | 1e-32 |
| Alignm gaps (pig, cow): | 79, 159 |
| Conread position: | 149-311 |
| Cow position: | chr26:21822992-21822826 (view UCSC Genome Browser custom track) |
| Alignm length: | 168 |
| Alignm identity: | 125 |
| Alignm E-value: | 5e-25 |
| Alignm gaps (pig, cow): | 62, 57 |
| Conread position: | 149-311 |
| Cow position: | chr26:25526302-25526468 (view UCSC Genome Browser custom track) |
| Alignm length: | 167 |
| Alignm identity: | 118 |
| Alignm E-value: | 3e-21 |
| Alignm gaps (pig, cow): | 83, 0 |
| Conread position: | 149-311 |
| Cow position: | chr26:34611128-34610965 (view UCSC Genome Browser custom track) |
| Alignm length: | 165 |
| Alignm identity: | 127 |
| Alignm E-value: | 3e-31 |
| Alignm gaps (pig, cow): | 94, 80 |
| Conread position: | 149-312 |
| Cow position: | chr26:7224289-7224131 (view UCSC Genome Browser custom track) |
| Alignm length: | 166 |
| Alignm identity: | 124 |
| Alignm E-value: | 1e-22 |
| Alignm gaps (pig, cow): | 16, 58 |
| Conread position: | 149-312 |
| Cow position: | chr26:12145065-12144894 (view UCSC Genome Browser custom track) |
| Alignm length: | 172 |
| Alignm identity: | 126 |
| Alignm E-value: | 5e-24 |
| Alignm gaps (pig, cow): | 73, 0 |
| Conread position: | 149-312 |
| Cow position: | chr26:20825067-20824900 (view UCSC Genome Browser custom track) |
| Alignm length: | 169 |
| Alignm identity: | 127 |
| Alignm E-value: | 2e-26 |
| Alignm gaps (pig, cow): | 82, 104 |
| Conread position: | 149-312 |
| Cow position: | chr26:21636984-21636829 (view UCSC Genome Browser custom track) |
| Alignm length: | 164 |
| Alignm identity: | 124 |
| Alignm E-value: | 6e-26 |
| Alignm gaps (pig, cow): | 62, 0 |
| Conread position: | 149-312 |
| Cow position: | chr26:29901008-29900839 (view UCSC Genome Browser custom track) |
| Alignm length: | 171 |
| Alignm identity: | 127 |
| Alignm E-value: | 5e-25 |
| Alignm gaps (pig, cow): | 80, 161 |
| Conread position: | 149-313 |
| Cow position: | chr26:7687192-7687019 (view UCSC Genome Browser custom track) |
| Alignm length: | 175 |
| Alignm identity: | 132 |
| Alignm E-value: | 6e-27 |
| Alignm gaps (pig, cow): | 89, 72 |
| Conread position: | 149-313 |
| Cow position: | chr26:20126041-20126189 (view UCSC Genome Browser custom track) |
| Alignm length: | 165 |
| Alignm identity: | 128 |
| Alignm E-value: | 6e-26 |
| Alignm gaps (pig, cow): | 65, 0 |
| Conread position: | 149-315 |
| Cow position: | chr26:18825230-18825058 (view UCSC Genome Browser custom track) |
| Alignm length: | 173 |
| Alignm identity: | 135 |
| Alignm E-value: | 1e-32 |
| Alignm gaps (pig, cow): | 79, 0 |
| Conread position: | 149-316 |
| Cow position: | chr26:4854598-4854772 (view UCSC Genome Browser custom track) |
| Alignm length: | 176 |
| Alignm identity: | 130 |
| Alignm E-value: | 2e-24 |
| Alignm gaps (pig, cow): | 79, 31 |
| Conread position: | 149-316 |
| Cow position: | chr26:19459746-19459922 (view UCSC Genome Browser custom track) |
| Alignm length: | 178 |
| Alignm identity: | 131 |
| Alignm E-value: | 4e-23 |
| Alignm gaps (pig, cow): | 78, 167 |
| Conread position: | 149-316 |
| Cow position: | chr26:28446636-28446794 (view UCSC Genome Browser custom track) |
| Alignm length: | 168 |
| Alignm identity: | 123 |
| Alignm E-value: | 1e-22 |
| Alignm gaps (pig, cow): | 75, 0 |
| Conread position: | 149-317 |
| Cow position: | chr26:10700850-10700676 (view UCSC Genome Browser custom track) |
| Alignm length: | 175 |
| Alignm identity: | 133 |
| Alignm E-value: | 9e-30 |
| Alignm gaps (pig, cow): | 93, 0 |
| Conread position: | 149-318 |
| Cow position: | chr26:28251209-28251384 (view UCSC Genome Browser custom track) |
| Alignm length: | 177 |
| Alignm identity: | 137 |
| Alignm E-value: | 1e-31 |
| Alignm gaps (pig, cow): | 83, 112 |
| Conread position: | 149-321 |
| Cow position: | chr26:24240732-24240910 (view UCSC Genome Browser custom track) |
| Alignm length: | 185 |
| Alignm identity: | 139 |
| Alignm E-value: | 2e-24 |
| Alignm gaps (pig, cow): | 73, 136 |
| Conread position: | 149-321 |
| Cow position: | chr26:26504788-26504960 (view UCSC Genome Browser custom track) |
| Alignm length: | 175 |
| Alignm identity: | 126 |
| Alignm E-value: | 2e-24 |
| Alignm gaps (pig, cow): | 37, 127 |
| Conread position: | 149-325 |
| Cow position: | chr26:21243148-21243322 (view UCSC Genome Browser custom track) |
| Alignm length: | 179 |
| Alignm identity: | 136 |
| Alignm E-value: | 1e-30 |
| Alignm gaps (pig, cow): | 94, 66 |
| Conread position: | 149-325 |
| Cow position: | chr26:26888080-26887906 (view UCSC Genome Browser custom track) |
| Alignm length: | 181 |
| Alignm identity: | 131 |
| Alignm E-value: | 4e-23 |
| Alignm gaps (pig, cow): | 94, 41 |
| Conread position: | 149-327 |
| Cow position: | chr26:12807247-12807067 (view UCSC Genome Browser custom track) |
| Alignm length: | 184 |
| Alignm identity: | 134 |
| Alignm E-value: | 5e-25 |
| Alignm gaps (pig, cow): | 83, 59 |
| Conread position: | 149-334 |
| Cow position: | chr26:19636345-19636531 (view UCSC Genome Browser custom track) |
| Alignm length: | 193 |
| Alignm identity: | 141 |
| Alignm E-value: | 5e-24 |
| Alignm gaps (pig, cow): | 15, 74 |
| Conread position: | 149-336 |
| Cow position: | chr26:33456467-33456282 (view UCSC Genome Browser custom track) |
| Alignm length: | 191 |
| Alignm identity: | 135 |
| Alignm E-value: | 4e-22 |
| Alignm gaps (pig, cow): | 70, 34 |
| Conread position: | 149-352 |
| Cow position: | chr26:33202017-33201805 (view UCSC Genome Browser custom track) |
| Alignm length: | 213 |
| Alignm identity: | 154 |
| Alignm E-value: | 9e-30 |
| Alignm gaps (pig, cow): | 93, 0 |
| Conread position: | 149-372 |
| Cow position: | chr26:14481501-14481282 (view UCSC Genome Browser custom track) |
| Alignm length: | 227 |
| Alignm identity: | 159 |
| Alignm E-value: | 2e-26 |
| Alignm gaps (pig, cow): | 153, 72 |
| Conread position: | 150-315 |
| Cow position: | chr26:32517403-32517243 (view UCSC Genome Browser custom track) |
| Alignm length: | 166 |
| Alignm identity: | 132 |
| Alignm E-value: | 5e-34 |
| Alignm gaps (pig, cow): | 71, 0 |
| Conread position: | 151-301 |
| Cow position: | chr26:16796155-16796001 (view UCSC Genome Browser custom track) |
| Alignm length: | 155 |
| Alignm identity: | 114 |
| Alignm E-value: | 4e-23 |
| Alignm gaps (pig, cow): | 77, 0 |
| Conread position: | 151-301 |
| Cow position: | chr26:34560116-34559960 (view UCSC Genome Browser custom track) |
| Alignm length: | 159 |
| Alignm identity: | 124 |
| Alignm E-value: | 7e-28 |
| Alignm gaps (pig, cow): | 94, 73 |
| Conread position: | 151-304 |
| Cow position: | chr26:25407449-25407596 (view UCSC Genome Browser custom track) |
| Alignm length: | 154 |
| Alignm identity: | 124 |
| Alignm E-value: | 1e-31 |
| Alignm gaps (pig, cow): | 29, 0 |
| Conread position: | 151-305 |
| Cow position: | chr26:31888787-31888945 (view UCSC Genome Browser custom track) |
| Alignm length: | 159 |
| Alignm identity: | 122 |
| Alignm E-value: | 8e-29 |
| Alignm gaps (pig, cow): | 88, 0 |
| Conread position: | 151-316 |
| Cow position: | chr26:33038168-33037999 (view UCSC Genome Browser custom track) |
| Alignm length: | 170 |
| Alignm identity: | 126 |
| Alignm E-value: | 7e-28 |
| Alignm gaps (pig, cow): | 93, 0 |
| Conread position: | 151-329 |
| Cow position: | chr26:6487736-6487552 (view UCSC Genome Browser custom track) |
| Alignm length: | 187 |
| Alignm identity: | 139 |
| Alignm E-value: | 2e-28 |
| Alignm gaps (pig, cow): | 90, 70 |
| Conread position: | 151-371 |
| Cow position: | chr26:15132692-15132921 (view UCSC Genome Browser custom track) |
| Alignm length: | 231 |
| Alignm identity: | 157 |
| Alignm E-value: | 1e-22 |
| Alignm gaps (pig, cow): | 46, 178 |
| Conread position: | 155-293 |
| Cow position: | chr26:35704447-35704577 (view UCSC Genome Browser custom track) |
| Alignm length: | 139 |
| Alignm identity: | 109 |
| Alignm E-value: | 1e-22 |
| Alignm gaps (pig, cow): | 37, 0 |
| Conread position: | 155-315 |
| Cow position: | chr26:19591542-19591704 (view UCSC Genome Browser custom track) |
| Alignm length: | 165 |
| Alignm identity: | 133 |
| Alignm E-value: | 5e-35 |
| Alignm gaps (pig, cow): | 80, 69 |
| Conread position: | 155-316 |
| Cow position: | chr26:21320005-21320172 (view UCSC Genome Browser custom track) |
| Alignm length: | 168 |
| Alignm identity: | 132 |
| Alignm E-value: | 1e-32 |
| Alignm gaps (pig, cow): | 73, 0 |
| Conread position: | 155-317 |
| Cow position: | chr26:28423345-28423513 (view UCSC Genome Browser custom track) |
| Alignm length: | 169 |
| Alignm identity: | 122 |
| Alignm E-value: | 4e-22 |
| Alignm gaps (pig, cow): | 73, 0 |
| Conread position: | 157-305 |
| Cow position: | chr26:11875160-11875009 (view UCSC Genome Browser custom track) |
| Alignm length: | 157 |
| Alignm identity: | 122 |
| Alignm E-value: | 5e-24 |
| Alignm gaps (pig, cow): | 77, 54 |
| Conread position: | 157-305 |
| Cow position: | chr26:33112325-33112170 (view UCSC Genome Browser custom track) |
| Alignm length: | 156 |
| Alignm identity: | 119 |
| Alignm E-value: | 2e-24 |
| Alignm gaps (pig, cow): | 48, 0 |
| Conread position: | 157-371 |
| Cow position: | chr26:33253255-33253037 (view UCSC Genome Browser custom track) |
| Alignm length: | 221 |
| Alignm identity: | 151 |
| Alignm E-value: | 5e-24 |
| Alignm gaps (pig, cow): | 70, 186 |
| Conread position: | 161-313 |
| Cow position: | chr26:33114873-33114719 (view UCSC Genome Browser custom track) |
| Alignm length: | 160 |
| Alignm identity: | 122 |
| Alignm E-value: | 1e-23 |
| Alignm gaps (pig, cow): | 46, 120 |
| Conread position: | 161-317 |
| Cow position: | chr26:17465040-17464888 (view UCSC Genome Browser custom track) |
| Alignm length: | 157 |
| Alignm identity: | 120 |
| Alignm E-value: | 7e-28 |
| Alignm gaps (pig, cow): | 59, 0 |
| Conread position: | 164-314 |
| Cow position: | chr26:13292739-13292897 (view UCSC Genome Browser custom track) |
| Alignm length: | 162 |
| Alignm identity: | 122 |
| Alignm E-value: | 3e-21 |
| Alignm gaps (pig, cow): | 59, 126 |
| Conread position: | 167-304 |
| Cow position: | chr26:24521027-24520887 (view UCSC Genome Browser custom track) |
| Alignm length: | 142 |
| Alignm identity: | 108 |
| Alignm E-value: | 4e-22 |
| Alignm gaps (pig, cow): | 43, 71 |
| Conread position: | 167-318 |
| Cow position: | chr26:13022533-13022689 (view UCSC Genome Browser custom track) |
| Alignm length: | 160 |
| Alignm identity: | 122 |
| Alignm E-value: | 1e-23 |
| Alignm gaps (pig, cow): | 78, 58 |
| Conread position: | 168-326 |
| Cow position: | chr26:5233046-5233206 (view UCSC Genome Browser custom track) |
| Alignm length: | 161 |
| Alignm identity: | 116 |
| Alignm E-value: | 1e-23 |
| Alignm gaps (pig, cow): | 143, 0 |
| Conread position: | 172-307 |
| Cow position: | chr26:31973491-31973622 (view UCSC Genome Browser custom track) |
| Alignm length: | 137 |
| Alignm identity: | 107 |
| Alignm E-value: | 1e-23 |
| Alignm gaps (pig, cow): | 131, 51 |
| Conread position: | 172-308 |
| Cow position: | chr26:12537464-12537324 (view UCSC Genome Browser custom track) |
| Alignm length: | 142 |
| Alignm identity: | 110 |
| Alignm E-value: | 1e-23 |
| Alignm gaps (pig, cow): | 56, 44 |
| Conread position: | 172-316 |
| Cow position: | chr26:13800586-13800736 (view UCSC Genome Browser custom track) |
| Alignm length: | 151 |
| Alignm identity: | 116 |
| Alignm E-value: | 2e-25 |
| Alignm gaps (pig, cow): | 67, 0 |
| Conread position: | 173-324 |
| Cow position: | chr26:23097117-23096958 (view UCSC Genome Browser custom track) |
| Alignm length: | 160 |
| Alignm identity: | 117 |
| Alignm E-value: | 3e-21 |
| Alignm gaps (pig, cow): | 55, 0 |
| Conread position: | 200-325 |
| Cow position: | chr26:18651749-18651880 (view UCSC Genome Browser custom track) |
| Alignm length: | 135 |
| Alignm identity: | 108 |
| Alignm E-value: | 1e-21 |
| Alignm gaps (pig, cow): | 30, 15 |
Show alignments to all cow chromosomes.