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Cow genome map

           
Conread name:
           
Utr1-UTR01B050090
        

               
Conread position:
               
111-313
               

               
Cow position:
               
chrX:41166795-41166593 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
209
               

               
Alignm identity:
               
147
               

               
Alignm E-value:
               
6e-23
               

               
Alignm gaps (pig, cow):
               
129, 21
               

               
Conread position:
               
114-316
               

               
Cow position:
               
chrX:12781-12980 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
207
               

               
Alignm identity:
               
147
               

               
Alignm E-value:
               
6e-24
               

               
Alignm gaps (pig, cow):
               
117, 23
               

               
Conread position:
               
118-315
               

               
Cow position:
               
chrX:34505019-34504813 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
208
               

               
Alignm identity:
               
155
               

               
Alignm E-value:
               
4e-30
               

               
Alignm gaps (pig, cow):
               
18, 90
               

               
Conread position:
               
118-330
               

               
Cow position:
               
chrX:1101590-1101803 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
216
               

               
Alignm identity:
               
144
               

               
Alignm E-value:
               
5e-21
               

               
Alignm gaps (pig, cow):
               
25, 35
               

               
Conread position:
               
123-364
               

               
Cow position:
               
chrX:6640465-6640714 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
253
               

               
Alignm identity:
               
173
               

               
Alignm E-value:
               
2e-25
               

               
Alignm gaps (pig, cow):
               
114, 21
               

               
Conread position:
               
125-332
               

               
Cow position:
               
chrX:14135716-14135933 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
221
               

               
Alignm identity:
               
167
               

               
Alignm E-value:
               
2e-33
               

               
Alignm gaps (pig, cow):
               
27, 12
               

               
Conread position:
               
132-308
               

               
Cow position:
               
chrX:29682064-29681886 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
181
               

               
Alignm identity:
               
137
               

               
Alignm E-value:
               
4e-30
               

               
Alignm gaps (pig, cow):
               
108, 15
               

               
Conread position:
               
133-300
               

               
Cow position:
               
chrX:8869356-8869181 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
177
               

               
Alignm identity:
               
133
               

               
Alignm E-value:
               
9e-27
               

               
Alignm gaps (pig, cow):
               
17, 87
               

               
Conread position:
               
144-322
               

               
Cow position:
               
chrX:11589309-11589122 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
188
               

               
Alignm identity:
               
135
               

               
Alignm E-value:
               
7e-25
               

               
Alignm gaps (pig, cow):
               
94, 0
               

               
Conread position:
               
147-301
               

               
Cow position:
               
chrX:38642310-38642466 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
161
               

               
Alignm identity:
               
122
               

               
Alignm E-value:
               
2e-24
               

               
Alignm gaps (pig, cow):
               
75, 122
               

               
Conread position:
               
147-304
               

               
Cow position:
               
chrX:12972744-12972905 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
162
               

               
Alignm identity:
               
123
               

               
Alignm E-value:
               
1e-27
               

               
Alignm gaps (pig, cow):
               
39, 0
               

               
Conread position:
               
147-308
               

               
Cow position:
               
chrX:10252139-10251971 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
169
               

               
Alignm identity:
               
137
               

               
Alignm E-value:
               
3e-36
               

               
Alignm gaps (pig, cow):
               
85, 0
               

               
Conread position:
               
147-315
               

               
Cow position:
               
chrX:45648942-45649108 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
170
               

               
Alignm identity:
               
121
               

               
Alignm E-value:
               
5e-22
               

               
Alignm gaps (pig, cow):
               
9, 75
               

               
Conread position:
               
147-317
               

               
Cow position:
               
chrX:44798988-44798812 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
178
               

               
Alignm identity:
               
129
               

               
Alignm E-value:
               
2e-22
               

               
Alignm gaps (pig, cow):
               
26, 169
               

               
Conread position:
               
147-325
               

               
Cow position:
               
chrX:27306515-27306687 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
179
               

               
Alignm identity:
               
142
               

               
Alignm E-value:
               
9e-38
               

               
Alignm gaps (pig, cow):
               
93, 0
               

               
Conread position:
               
148-291
               

               
Cow position:
               
chrX:25286662-25286508 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
155
               

               
Alignm identity:
               
118
               

               
Alignm E-value:
               
5e-22
               

               
Alignm gaps (pig, cow):
               
54, 0
               

               
Conread position:
               
148-304
               

               
Cow position:
               
chrX:918653-918502 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
157
               

               
Alignm identity:
               
124
               

               
Alignm E-value:
               
1e-30
               

               
Alignm gaps (pig, cow):
               
13, 0
               

               
Conread position:
               
148-304
               

               
Cow position:
               
chrX:16836227-16836067 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
161
               

               
Alignm identity:
               
125
               

               
Alignm E-value:
               
4e-30
               

               
Alignm gaps (pig, cow):
               
83, 0
               

               
Conread position:
               
148-304
               

               
Cow position:
               
chrX:23359052-23358890 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
163
               

               
Alignm identity:
               
129
               

               
Alignm E-value:
               
2e-31
               

               
Alignm gaps (pig, cow):
               
80, 0
               

               
Conread position:
               
148-308
               

               
Cow position:
               
chrX:41215384-41215554 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
171
               

               
Alignm identity:
               
134
               

               
Alignm E-value:
               
1e-30
               

               
Alignm gaps (pig, cow):
               
80, 0
               

               
Conread position:
               
148-312
               

               
Cow position:
               
chrX:39642560-39642393 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
169
               

               
Alignm identity:
               
135
               

               
Alignm E-value:
               
2e-35
               

               
Alignm gaps (pig, cow):
               
94, 37
               

               
Conread position:
               
148-315
               

               
Cow position:
               
chrX:40556397-40556224 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
174
               

               
Alignm identity:
               
138
               

               
Alignm E-value:
               
7e-35
               

               
Alignm gaps (pig, cow):
               
58, 0
               

               
Conread position:
               
148-316
               

               
Cow position:
               
chrX:5487877-5487710 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
171
               

               
Alignm identity:
               
139
               

               
Alignm E-value:
               
3e-38
               

               
Alignm gaps (pig, cow):
               
95, 76
               

               
Conread position:
               
148-316
               

               
Cow position:
               
chrX:6544316-6544485 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
170
               

               
Alignm identity:
               
130
               

               
Alignm E-value:
               
6e-33
               

               
Alignm gaps (pig, cow):
               
154, 0
               

               
Conread position:
               
148-316
               

               
Cow position:
               
chrX:11529405-11529577 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
173
               

               
Alignm identity:
               
128
               

               
Alignm E-value:
               
3e-27
               

               
Alignm gaps (pig, cow):
               
82, 0
               

               
Conread position:
               
148-319
               

               
Cow position:
               
chrX:25232059-25232225 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
174
               

               
Alignm identity:
               
138
               

               
Alignm E-value:
               
5e-32
               

               
Alignm gaps (pig, cow):
               
164, 73
               

               
Conread position:
               
148-322
               

               
Cow position:
               
chrX:23088914-23089081 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
177
               

               
Alignm identity:
               
130
               

               
Alignm E-value:
               
2e-23
               

               
Alignm gaps (pig, cow):
               
104, 70
               

               
Conread position:
               
148-325
               

               
Cow position:
               
chrX:12437211-12437033 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
182
               

               
Alignm identity:
               
141
               

               
Alignm E-value:
               
6e-33
               

               
Alignm gaps (pig, cow):
               
7, 30
               

               
Conread position:
               
148-326
               

               
Cow position:
               
chrX:23136802-23136977 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
183
               

               
Alignm identity:
               
135
               

               
Alignm E-value:
               
2e-24
               

               
Alignm gaps (pig, cow):
               
80, 126
               

               
Conread position:
               
148-348
               

               
Cow position:
               
chrX:30337895-30337681 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
216
               

               
Alignm identity:
               
154
               

               
Alignm E-value:
               
2e-23
               

               
Alignm gaps (pig, cow):
               
79, 16
               

               
Conread position:
               
149-287
               

               
Cow position:
               
chrX:35542950-35543094 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
145
               

               
Alignm identity:
               
110
               

               
Alignm E-value:
               
2e-22
               

               
Alignm gaps (pig, cow):
               
78, 0
               

               
Conread position:
               
149-296
               

               
Cow position:
               
chrX:20151919-20152067 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
150
               

               
Alignm identity:
               
119
               

               
Alignm E-value:
               
4e-30
               

               
Alignm gaps (pig, cow):
               
76, 93
               

               
Conread position:
               
149-298
               

               
Cow position:
               
chrX:31436537-31436690 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
156
               

               
Alignm identity:
               
127
               

               
Alignm E-value:
               
2e-32
               

               
Alignm gaps (pig, cow):
               
86, 72
               

               
Conread position:
               
149-301
               

               
Cow position:
               
chrX:17795044-17795203 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
161
               

               
Alignm identity:
               
125
               

               
Alignm E-value:
               
3e-27
               

               
Alignm gaps (pig, cow):
               
87, 147
               

               
Conread position:
               
149-301
               

               
Cow position:
               
chrX:21986228-21986077 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
155
               

               
Alignm identity:
               
127
               

               
Alignm E-value:
               
7e-35
               

               
Alignm gaps (pig, cow):
               
95, 74
               

               
Conread position:
               
149-301
               

               
Cow position:
               
chrX:27074988-27074827 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
162
               

               
Alignm identity:
               
120
               

               
Alignm E-value:
               
2e-21
               

               
Alignm gaps (pig, cow):
               
76, 0
               

               
Conread position:
               
149-301
               

               
Cow position:
               
chrX:42927761-42927606 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
157
               

               
Alignm identity:
               
124
               

               
Alignm E-value:
               
1e-30
               

               
Alignm gaps (pig, cow):
               
81, 117
               

               
Conread position:
               
149-302
               

               
Cow position:
               
chrX:41526465-41526309 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
159
               

               
Alignm identity:
               
121
               

               
Alignm E-value:
               
2e-25
               

               
Alignm gaps (pig, cow):
               
100, 30
               

               
Conread position:
               
149-303
               

               
Cow position:
               
chrX:2936020-2936179 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
160
               

               
Alignm identity:
               
123
               

               
Alignm E-value:
               
3e-28
               

               
Alignm gaps (pig, cow):
               
81, 0
               

               
Conread position:
               
149-304
               

               
Cow position:
               
chrX:4152968-4152817 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
156
               

               
Alignm identity:
               
129
               

               
Alignm E-value:
               
8e-37
               

               
Alignm gaps (pig, cow):
               
75, 0
               

               
Conread position:
               
149-304
               

               
Cow position:
               
chrX:9201611-9201770 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
162
               

               
Alignm identity:
               
127
               

               
Alignm E-value:
               
4e-29
               

               
Alignm gaps (pig, cow):
               
88, 72
               

               
Conread position:
               
149-304
               

               
Cow position:
               
chrX:31480034-31480193 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
163
               

               
Alignm identity:
               
122
               

               
Alignm E-value:
               
2e-22
               

               
Alignm gaps (pig, cow):
               
67, 13
               

               
Conread position:
               
149-304
               

               
Cow position:
               
chrX:34532583-34532738 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
159
               

               
Alignm identity:
               
118
               

               
Alignm E-value:
               
2e-23
               

               
Alignm gaps (pig, cow):
               
67, 111
               

               
Conread position:
               
149-304
               

               
Cow position:
               
chrX:41453365-41453526 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
162
               

               
Alignm identity:
               
124
               

               
Alignm E-value:
               
3e-28
               

               
Alignm gaps (pig, cow):
               
79, 0
               

               
Conread position:
               
149-304
               

               
Cow position:
               
chrX:42086890-42087053 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
166
               

               
Alignm identity:
               
126
               

               
Alignm E-value:
               
6e-24
               

               
Alignm gaps (pig, cow):
               
79, 133
               

               
Conread position:
               
149-304
               

               
Cow position:
               
chrX:42381049-42380885 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
167
               

               
Alignm identity:
               
127
               

               
Alignm E-value:
               
6e-24
               

               
Alignm gaps (pig, cow):
               
79, 134
               

               
Conread position:
               
149-306
               

               
Cow position:
               
chrX:11653833-11653996 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
166
               

               
Alignm identity:
               
123
               

               
Alignm E-value:
               
2e-23
               

               
Alignm gaps (pig, cow):
               
94, 69
               

               
Conread position:
               
149-307
               

               
Cow position:
               
chrX:2551154-2551307 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
160
               

               
Alignm identity:
               
118
               

               
Alignm E-value:
               
2e-22
               

               
Alignm gaps (pig, cow):
               
16, 75
               

               
Conread position:
               
149-307
               

               
Cow position:
               
chrX:11326034-11325878 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
159
               

               
Alignm identity:
               
121
               

               
Alignm E-value:
               
1e-28
               

               
Alignm gaps (pig, cow):
               
46, 0
               

               
Conread position:
               
149-307
               

               
Cow position:
               
chrX:38560622-38560780 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
159
               

               
Alignm identity:
               
120
               

               
Alignm E-value:
               
1e-29
               

               
Alignm gaps (pig, cow):
               
0, 0
               

               
Conread position:
               
149-308
               

               
Cow position:
               
chrX:16762834-16762999 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
166
               

               
Alignm identity:
               
120
               

               
Alignm E-value:
               
5e-22
               

               
Alignm gaps (pig, cow):
               
38, 0
               

               
Conread position:
               
149-308
               

               
Cow position:
               
chrX:23471803-23471637 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
168
               

               
Alignm identity:
               
128
               

               
Alignm E-value:
               
1e-27
               

               
Alignm gaps (pig, cow):
               
95, 72
               

               
Conread position:
               
149-308
               

               
Cow position:
               
chrX:39290422-39290587 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
166
               

               
Alignm identity:
               
125
               

               
Alignm E-value:
               
8e-26
               

               
Alignm gaps (pig, cow):
               
71, 0
               

               
Conread position:
               
149-309
               

               
Cow position:
               
chrX:6480533-6480363 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
171
               

               
Alignm identity:
               
130
               

               
Alignm E-value:
               
9e-27
               

               
Alignm gaps (pig, cow):
               
95, 0
               

               
Conread position:
               
149-310
               

               
Cow position:
               
chrX:27170802-27170967 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
169
               

               
Alignm identity:
               
128
               

               
Alignm E-value:
               
2e-25
               

               
Alignm gaps (pig, cow):
               
37, 78
               

               
Conread position:
               
149-310
               

               
Cow position:
               
chrX:45429959-45429798 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
163
               

               
Alignm identity:
               
118
               

               
Alignm E-value:
               
6e-24
               

               
Alignm gaps (pig, cow):
               
86, 147
               

               
Conread position:
               
149-311
               

               
Cow position:
               
chrX:8326967-8327139 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
173
               

               
Alignm identity:
               
131
               

               
Alignm E-value:
               
9e-27
               

               
Alignm gaps (pig, cow):
               
79, 0
               

               
Conread position:
               
149-311
               

               
Cow position:
               
chrX:23497628-23497463 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
167
               

               
Alignm identity:
               
129
               

               
Alignm E-value:
               
1e-29
               

               
Alignm gaps (pig, cow):
               
79, 67
               

               
Conread position:
               
149-311
               

               
Cow position:
               
chrX:25925579-25925422 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
163
               

               
Alignm identity:
               
118
               

               
Alignm E-value:
               
2e-21
               

               
Alignm gaps (pig, cow):
               
71, 0
               

               
Conread position:
               
149-311
               

               
Cow position:
               
chrX:26881502-26881327 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
177
               

               
Alignm identity:
               
139
               

               
Alignm E-value:
               
1e-29
               

               
Alignm gaps (pig, cow):
               
80, 124
               

               
Conread position:
               
149-311
               

               
Cow position:
               
chrX:28940305-28940478 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
174
               

               
Alignm identity:
               
136
               

               
Alignm E-value:
               
1e-29
               

               
Alignm gaps (pig, cow):
               
26, 0
               

               
Conread position:
               
149-311
               

               
Cow position:
               
chrX:33855156-33854993 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
171
               

               
Alignm identity:
               
132
               

               
Alignm E-value:
               
2e-25
               

               
Alignm gaps (pig, cow):
               
91, 30
               

               
Conread position:
               
149-311
               

               
Cow position:
               
chrX:40685265-40685096 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
171
               

               
Alignm identity:
               
125
               

               
Alignm E-value:
               
6e-23
               

               
Alignm gaps (pig, cow):
               
75, 158
               

               
Conread position:
               
149-312
               

               
Cow position:
               
chrX:161475-161637 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
169
               

               
Alignm identity:
               
127
               

               
Alignm E-value:
               
6e-24
               

               
Alignm gaps (pig, cow):
               
89, 62
               

               
Conread position:
               
149-312
               

               
Cow position:
               
chrX:4467030-4467185 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
164
               

               
Alignm identity:
               
130
               

               
Alignm E-value:
               
1e-30
               

               
Alignm gaps (pig, cow):
               
73, 0
               

               
Conread position:
               
149-312
               

               
Cow position:
               
chrX:27431855-27431689 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
170
               

               
Alignm identity:
               
135
               

               
Alignm E-value:
               
2e-32
               

               
Alignm gaps (pig, cow):
               
77, 131
               

               
Conread position:
               
149-312
               

               
Cow position:
               
chrX:31442766-31442604 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
164
               

               
Alignm identity:
               
116
               

               
Alignm E-value:
               
2e-22
               

               
Alignm gaps (pig, cow):
               
81, 0
               

               
Conread position:
               
149-312
               

               
Cow position:
               
chrX:33000968-33001133 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
167
               

               
Alignm identity:
               
118
               

               
Alignm E-value:
               
5e-21
               

               
Alignm gaps (pig, cow):
               
83, 67
               

               
Conread position:
               
149-312
               

               
Cow position:
               
chrX:34377005-34377174 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
172
               

               
Alignm identity:
               
129
               

               
Alignm E-value:
               
8e-26
               

               
Alignm gaps (pig, cow):
               
96, 75
               

               
Conread position:
               
149-312
               

               
Cow position:
               
chrX:34792248-34792087 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
169
               

               
Alignm identity:
               
131
               

               
Alignm E-value:
               
9e-27
               

               
Alignm gaps (pig, cow):
               
90, 24
               

               
Conread position:
               
149-312
               

               
Cow position:
               
chrX:37781046-37780877 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
172
               

               
Alignm identity:
               
126
               

               
Alignm E-value:
               
2e-22
               

               
Alignm gaps (pig, cow):
               
93, 72
               

               
Conread position:
               
149-312
               

               
Cow position:
               
chrX:38964171-38964333 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
165
               

               
Alignm identity:
               
127
               

               
Alignm E-value:
               
5e-31
               

               
Alignm gaps (pig, cow):
               
154, 75
               

               
Conread position:
               
149-312
               

               
Cow position:
               
chrX:43115213-43115384 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
172
               

               
Alignm identity:
               
126
               

               
Alignm E-value:
               
2e-23
               

               
Alignm gaps (pig, cow):
               
79, 0
               

               
Conread position:
               
149-313
               

               
Cow position:
               
chrX:4750269-4750101 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
174
               

               
Alignm identity:
               
139
               

               
Alignm E-value:
               
4e-30
               

               
Alignm gaps (pig, cow):
               
86, 48
               

               
Conread position:
               
149-313
               

               
Cow position:
               
chrX:16556154-16555989 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
171
               

               
Alignm identity:
               
125
               

               
Alignm E-value:
               
5e-21
               

               
Alignm gaps (pig, cow):
               
93, 39
               

               
Conread position:
               
149-313
               

               
Cow position:
               
chrX:35268924-35269093 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
171
               

               
Alignm identity:
               
124
               

               
Alignm E-value:
               
2e-21
               

               
Alignm gaps (pig, cow):
               
79, 129
               

               
Conread position:
               
149-314
               

               
Cow position:
               
chrX:5026319-5026488 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
170
               

               
Alignm identity:
               
124
               

               
Alignm E-value:
               
7e-25
               

               
Alignm gaps (pig, cow):
               
79, 0
               

               
Conread position:
               
149-314
               

               
Cow position:
               
chrX:32208759-32208591 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
173
               

               
Alignm identity:
               
131
               

               
Alignm E-value:
               
3e-26
               

               
Alignm gaps (pig, cow):
               
109, 29
               

               
Conread position:
               
149-314
               

               
Cow position:
               
chrX:34314087-34314259 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
175
               

               
Alignm identity:
               
138
               

               
Alignm E-value:
               
5e-32
               

               
Alignm gaps (pig, cow):
               
91, 72
               

               
Conread position:
               
149-315
               

               
Cow position:
               
chrX:1466225-1466403 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
180
               

               
Alignm identity:
               
138
               

               
Alignm E-value:
               
1e-27
               

               
Alignm gaps (pig, cow):
               
96, 76
               

               
Conread position:
               
149-315
               

               
Cow position:
               
chrX:17524321-17524146 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
178
               

               
Alignm identity:
               
131
               

               
Alignm E-value:
               
2e-21
               

               
Alignm gaps (pig, cow):
               
56, 46
               

               
Conread position:
               
149-315
               

               
Cow position:
               
chrX:18812172-18812335 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
168
               

               
Alignm identity:
               
122
               

               
Alignm E-value:
               
6e-24
               

               
Alignm gaps (pig, cow):
               
154, 77
               

               
Conread position:
               
149-315
               

               
Cow position:
               
chrX:34837001-34836833 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
170
               

               
Alignm identity:
               
130
               

               
Alignm E-value:
               
1e-30
               

               
Alignm gaps (pig, cow):
               
94, 127
               

               
Conread position:
               
149-315
               

               
Cow position:
               
chrX:41871130-41871298 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
172
               

               
Alignm identity:
               
132
               

               
Alignm E-value:
               
1e-28
               

               
Alignm gaps (pig, cow):
               
105, 72
               

               
Conread position:
               
149-316
               

               
Cow position:
               
chrX:11656144-11656318 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
175
               

               
Alignm identity:
               
140
               

               
Alignm E-value:
               
2e-35
               

               
Alignm gaps (pig, cow):
               
79, 0
               

               
Conread position:
               
149-316
               

               
Cow position:
               
chrX:15100046-15100219 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
176
               

               
Alignm identity:
               
127
               

               
Alignm E-value:
               
5e-21
               

               
Alignm gaps (pig, cow):
               
93, 57
               

               
Conread position:
               
149-316
               

               
Cow position:
               
chrX:17956754-17956928 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
176
               

               
Alignm identity:
               
130
               

               
Alignm E-value:
               
2e-24
               

               
Alignm gaps (pig, cow):
               
80, 15
               

               
Conread position:
               
149-316
               

               
Cow position:
               
chrX:19018768-19018590 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
180
               

               
Alignm identity:
               
132
               

               
Alignm E-value:
               
6e-23
               

               
Alignm gaps (pig, cow):
               
49, 169
               

               
Conread position:
               
149-316
               

               
Cow position:
               
chrX:19394616-19394794 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
179
               

               
Alignm identity:
               
138
               

               
Alignm E-value:
               
1e-30
               

               
Alignm gaps (pig, cow):
               
81, 0
               

               
Conread position:
               
149-316
               

               
Cow position:
               
chrX:20584391-20584550 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
168
               

               
Alignm identity:
               
136
               

               
Alignm E-value:
               
7e-35
               

               
Alignm gaps (pig, cow):
               
74, 0
               

               
Conread position:
               
149-316
               

               
Cow position:
               
chrX:26882017-26881840 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
178
               

               
Alignm identity:
               
130
               

               
Alignm E-value:
               
2e-22
               

               
Alignm gaps (pig, cow):
               
79, 0
               

               
Conread position:
               
149-316
               

               
Cow position:
               
chrX:41858819-41858644 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
176
               

               
Alignm identity:
               
129
               

               
Alignm E-value:
               
6e-23
               

               
Alignm gaps (pig, cow):
               
61, 0
               

               
Conread position:
               
149-316
               

               
Cow position:
               
chrX:42331347-42331514 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
171
               

               
Alignm identity:
               
124
               

               
Alignm E-value:
               
2e-23
               

               
Alignm gaps (pig, cow):
               
73, 123
               

               
Conread position:
               
149-316
               

               
Cow position:
               
chrX:42893989-42894159 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
173
               

               
Alignm identity:
               
124
               

               
Alignm E-value:
               
5e-22
               

               
Alignm gaps (pig, cow):
               
86, 161
               

               
Conread position:
               
149-317
               

               
Cow position:
               
chrX:7722051-7722214 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
169
               

               
Alignm identity:
               
124
               

               
Alignm E-value:
               
2e-25
               

               
Alignm gaps (pig, cow):
               
81, 0
               

               
Conread position:
               
149-317
               

               
Cow position:
               
chrX:13177413-13177245 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
173
               

               
Alignm identity:
               
137
               

               
Alignm E-value:
               
2e-33
               

               
Alignm gaps (pig, cow):
               
80, 129
               

               
Conread position:
               
149-317
               

               
Cow position:
               
chrX:17525804-17525638 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
171
               

               
Alignm identity:
               
130
               

               
Alignm E-value:
               
4e-29
               

               
Alignm gaps (pig, cow):
               
94, 121
               

               
Conread position:
               
149-317
               

               
Cow position:
               
chrX:19469443-19469274 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
170
               

               
Alignm identity:
               
127
               

               
Alignm E-value:
               
4e-30
               

               
Alignm gaps (pig, cow):
               
149, 0
               

               
Conread position:
               
149-317
               

               
Cow position:
               
chrX:20583729-20583900 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
175
               

               
Alignm identity:
               
141
               

               
Alignm E-value:
               
2e-35
               

               
Alignm gaps (pig, cow):
               
79, 131
               

               
Conread position:
               
149-317
               

               
Cow position:
               
chrX:24054740-24054900 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
171
               

               
Alignm identity:
               
129
               

               
Alignm E-value:
               
6e-24
               

               
Alignm gaps (pig, cow):
               
113, 75
               

               
Conread position:
               
149-317
               

               
Cow position:
               
chrX:34991427-34991601 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
177
               

               
Alignm identity:
               
136
               

               
Alignm E-value:
               
4e-30
               

               
Alignm gaps (pig, cow):
               
93, 75
               

               
Conread position:
               
149-319
               

               
Cow position:
               
chrX:48822279-48822101 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
180
               

               
Alignm identity:
               
129
               

               
Alignm E-value:
               
5e-21
               

               
Alignm gaps (pig, cow):
               
80, 166
               

               
Conread position:
               
149-320
               

               
Cow position:
               
chrX:29050310-29050487 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
180
               

               
Alignm identity:
               
140
               

               
Alignm E-value:
               
5e-31
               

               
Alignm gaps (pig, cow):
               
83, 67
               

               
Conread position:
               
149-323
               

               
Cow position:
               
chrX:5118435-5118252 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
184
               

               
Alignm identity:
               
135
               

               
Alignm E-value:
               
3e-26
               

               
Alignm gaps (pig, cow):
               
71, 0
               

               
Conread position:
               
149-323
               

               
Cow position:
               
chrX:38218777-38218961 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
185
               

               
Alignm identity:
               
142
               

               
Alignm E-value:
               
1e-30
               

               
Alignm gaps (pig, cow):
               
43, 0
               

               
Conread position:
               
149-324
               

               
Cow position:
               
chrX:231955-231779 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
179
               

               
Alignm identity:
               
126
               

               
Alignm E-value:
               
5e-22
               

               
Alignm gaps (pig, cow):
               
115, 72
               

               
Conread position:
               
149-324
               

               
Cow position:
               
chrX:1088080-1087902 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
180
               

               
Alignm identity:
               
133
               

               
Alignm E-value:
               
3e-27
               

               
Alignm gaps (pig, cow):
               
79, 164
               

               
Conread position:
               
149-324
               

               
Cow position:
               
chrX:3806745-3806926 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
182
               

               
Alignm identity:
               
132
               

               
Alignm E-value:
               
8e-26
               

               
Alignm gaps (pig, cow):
               
83, 0
               

               
Conread position:
               
149-324
               

               
Cow position:
               
chrX:27145667-27145844 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
182
               

               
Alignm identity:
               
141
               

               
Alignm E-value:
               
2e-31
               

               
Alignm gaps (pig, cow):
               
92, 72
               

               
Conread position:
               
149-325
               

               
Cow position:
               
chrX:4269001-4268822 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
180
               

               
Alignm identity:
               
125
               

               
Alignm E-value:
               
5e-22
               

               
Alignm gaps (pig, cow):
               
84, 0
               

               
Conread position:
               
149-325
               

               
Cow position:
               
chrX:4289507-4289686 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
183
               

               
Alignm identity:
               
145
               

               
Alignm E-value:
               
8e-36
               

               
Alignm gaps (pig, cow):
               
94, 74
               

               
Conread position:
               
149-325
               

               
Cow position:
               
chrX:11633745-11633927 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
186
               

               
Alignm identity:
               
136
               

               
Alignm E-value:
               
2e-24
               

               
Alignm gaps (pig, cow):
               
67, 163
               

               
Conread position:
               
149-325
               

               
Cow position:
               
chrX:16984704-16984882 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
181
               

               
Alignm identity:
               
139
               

               
Alignm E-value:
               
6e-33
               

               
Alignm gaps (pig, cow):
               
100, 49
               

               
Conread position:
               
149-325
               

               
Cow position:
               
chrX:27668895-27668714 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
185
               

               
Alignm identity:
               
149
               

               
Alignm E-value:
               
9e-38
               

               
Alignm gaps (pig, cow):
               
92, 72
               

               
Conread position:
               
149-325
               

               
Cow position:
               
chrX:32747795-32747968 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
179
               

               
Alignm identity:
               
131
               

               
Alignm E-value:
               
8e-26
               

               
Alignm gaps (pig, cow):
               
94, 127
               

               
Conread position:
               
149-325
               

               
Cow position:
               
chrX:32866938-32867118 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
181
               

               
Alignm identity:
               
142
               

               
Alignm E-value:
               
3e-36
               

               
Alignm gaps (pig, cow):
               
79, 0
               

               
Conread position:
               
149-325
               

               
Cow position:
               
chrX:32943013-32942833 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
182
               

               
Alignm identity:
               
129
               

               
Alignm E-value:
               
2e-22
               

               
Alignm gaps (pig, cow):
               
70, 162
               

               
Conread position:
               
149-325
               

               
Cow position:
               
chrX:35681630-35681815 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
187
               

               
Alignm identity:
               
134
               

               
Alignm E-value:
               
5e-22
               

               
Alignm gaps (pig, cow):
               
81, 175
               

               
Conread position:
               
149-325
               

               
Cow position:
               
chrX:46068696-46068516 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
183
               

               
Alignm identity:
               
134
               

               
Alignm E-value:
               
7e-25
               

               
Alignm gaps (pig, cow):
               
73, 145
               

               
Conread position:
               
149-326
               

               
Cow position:
               
chrX:8925762-8925928 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
178
               

               
Alignm identity:
               
137
               

               
Alignm E-value:
               
1e-29
               

               
Alignm gaps (pig, cow):
               
59, 0
               

               
Conread position:
               
149-326
               

               
Cow position:
               
chrX:39352849-39353021 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
178
               

               
Alignm identity:
               
127
               

               
Alignm E-value:
               
2e-23
               

               
Alignm gaps (pig, cow):
               
10, 0
               

               
Conread position:
               
149-327
               

               
Cow position:
               
chrX:31729505-31729684 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
185
               

               
Alignm identity:
               
134
               

               
Alignm E-value:
               
5e-22
               

               
Alignm gaps (pig, cow):
               
85, 53
               

               
Conread position:
               
149-327
               

               
Cow position:
               
chrX:41027222-41027410 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
189
               

               
Alignm identity:
               
134
               

               
Alignm E-value:
               
2e-21
               

               
Alignm gaps (pig, cow):
               
79, 0
               

               
Conread position:
               
149-333
               

               
Cow position:
               
chrX:33539233-33539405 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
185
               

               
Alignm identity:
               
136
               

               
Alignm E-value:
               
2e-24
               

               
Alignm gaps (pig, cow):
               
78, 0
               

               
Conread position:
               
149-334
               

               
Cow position:
               
chrX:22115254-22115057 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
198
               

               
Alignm identity:
               
141
               

               
Alignm E-value:
               
6e-24
               

               
Alignm gaps (pig, cow):
               
83, 0
               

               
Conread position:
               
149-351
               

               
Cow position:
               
chrX:35885664-35885456 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
212
               

               
Alignm identity:
               
148
               

               
Alignm E-value:
               
5e-22
               

               
Alignm gaps (pig, cow):
               
90, 57
               

               
Conread position:
               
149-352
               

               
Cow position:
               
chrX:42875275-42875480 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
211
               

               
Alignm identity:
               
154
               

               
Alignm E-value:
               
1e-27
               

               
Alignm gaps (pig, cow):
               
79, 162
               

               
Conread position:
               
149-371
               

               
Cow position:
               
chrX:42449951-42449726 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
233
               

               
Alignm identity:
               
161
               

               
Alignm E-value:
               
5e-22
               

               
Alignm gaps (pig, cow):
               
79, 164
               

               
Conread position:
               
149-371
               

               
Cow position:
               
chrX:47855044-47855266 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
229
               

               
Alignm identity:
               
167
               

               
Alignm E-value:
               
5e-31
               

               
Alignm gaps (pig, cow):
               
79, 29
               

               
Conread position:
               
149-372
               

               
Cow position:
               
chrX:42247119-42246889 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
234
               

               
Alignm identity:
               
163
               

               
Alignm E-value:
               
8e-26
               

               
Alignm gaps (pig, cow):
               
79, 164
               

               
Conread position:
               
150-301
               

               
Cow position:
               
chrX:15007085-15006935 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
152
               

               
Alignm identity:
               
110
               

               
Alignm E-value:
               
2e-22
               

               
Alignm gaps (pig, cow):
               
65, 0
               

               
Conread position:
               
150-313
               

               
Cow position:
               
chrX:40035376-40035206 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
174
               

               
Alignm identity:
               
135
               

               
Alignm E-value:
               
9e-27
               

               
Alignm gaps (pig, cow):
               
78, 150
               

               
Conread position:
               
150-316
               

               
Cow position:
               
chrX:24749149-24749325 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
178
               

               
Alignm identity:
               
136
               

               
Alignm E-value:
               
3e-28
               

               
Alignm gaps (pig, cow):
               
80, 164
               

               
Conread position:
               
151-310
               

               
Cow position:
               
chrX:38094455-38094293 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
165
               

               
Alignm identity:
               
126
               

               
Alignm E-value:
               
1e-27
               

               
Alignm gaps (pig, cow):
               
81, 128
               

               
Conread position:
               
151-312
               

               
Cow position:
               
chrX:40263746-40263903 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
162
               

               
Alignm identity:
               
118
               

               
Alignm E-value:
               
6e-23
               

               
Alignm gaps (pig, cow):
               
100, 0
               

               
Conread position:
               
151-315
               

               
Cow position:
               
chrX:42479898-42480065 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
169
               

               
Alignm identity:
               
123
               

               
Alignm E-value:
               
2e-23
               

               
Alignm gaps (pig, cow):
               
81, 134
               

               
Conread position:
               
151-316
               

               
Cow position:
               
chrX:2523617-2523462 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
166
               

               
Alignm identity:
               
123
               

               
Alignm E-value:
               
5e-22
               

               
Alignm gaps (pig, cow):
               
76, 0
               

               
Conread position:
               
151-317
               

               
Cow position:
               
chrX:22392919-22392748 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
172
               

               
Alignm identity:
               
125
               

               
Alignm E-value:
               
2e-24
               

               
Alignm gaps (pig, cow):
               
67, 0
               

               
Conread position:
               
151-328
               

               
Cow position:
               
chrX:37072454-37072635 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
185
               

               
Alignm identity:
               
142
               

               
Alignm E-value:
               
5e-31
               

               
Alignm gaps (pig, cow):
               
89, 158
               

               
Conread position:
               
151-332
               

               
Cow position:
               
chrX:34411911-34412101 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
193
               

               
Alignm identity:
               
143
               

               
Alignm E-value:
               
3e-27
               

               
Alignm gaps (pig, cow):
               
77, 165
               

               
Conread position:
               
152-293
               

               
Cow position:
               
chrX:41192770-41192905 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
142
               

               
Alignm identity:
               
113
               

               
Alignm E-value:
               
3e-26
               

               
Alignm gaps (pig, cow):
               
66, 0
               

               
Conread position:
               
152-304
               

               
Cow position:
               
chrX:24633761-24633913 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
161
               

               
Alignm identity:
               
123
               

               
Alignm E-value:
               
5e-22
               

               
Alignm gaps (pig, cow):
               
76, 131
               

               
Conread position:
               
155-301
               

               
Cow position:
               
chrX:35382967-35382818 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
151
               

               
Alignm identity:
               
113
               

               
Alignm E-value:
               
6e-23
               

               
Alignm gaps (pig, cow):
               
74, 12
               

               
Conread position:
               
155-308
               

               
Cow position:
               
chrX:9252094-9251932 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
163
               

               
Alignm identity:
               
129
               

               
Alignm E-value:
               
5e-31
               

               
Alignm gaps (pig, cow):
               
77, 0
               

               
Conread position:
               
155-312
               

               
Cow position:
               
chrX:12979765-12979600 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
166
               

               
Alignm identity:
               
126
               

               
Alignm E-value:
               
2e-25
               

               
Alignm gaps (pig, cow):
               
73, 0
               

               
Conread position:
               
155-324
               

               
Cow position:
               
chrX:31744935-31744769 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
171
               

               
Alignm identity:
               
129
               

               
Alignm E-value:
               
1e-27
               

               
Alignm gaps (pig, cow):
               
157, 70
               

               
Conread position:
               
156-292
               

               
Cow position:
               
chrX:39419644-39419506 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
139
               

               
Alignm identity:
               
105
               

               
Alignm E-value:
               
2e-23
               

               
Alignm gaps (pig, cow):
               
87, 0
               

               
Conread position:
               
156-299
               

               
Cow position:
               
chrX:25420401-25420546 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
148
               

               
Alignm identity:
               
124
               

               
Alignm E-value:
               
2e-34
               

               
Alignm gaps (pig, cow):
               
87, 65
               

               
Conread position:
               
156-301
               

               
Cow position:
               
chrX:4486954-4486800 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
155
               

               
Alignm identity:
               
120
               

               
Alignm E-value:
               
3e-26
               

               
Alignm gaps (pig, cow):
               
74, 0
               

               
Conread position:
               
157-310
               

               
Cow position:
               
chrX:12095701-12095538 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
164
               

               
Alignm identity:
               
124
               

               
Alignm E-value:
               
7e-25
               

               
Alignm gaps (pig, cow):
               
74, 0
               

               
Conread position:
               
157-317
               

               
Cow position:
               
chrX:16763854-16763690 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
165
               

               
Alignm identity:
               
117
               

               
Alignm E-value:
               
5e-21
               

               
Alignm gaps (pig, cow):
               
75, 0
               

               
Conread position:
               
157-355
               

               
Cow position:
               
chrX:27446757-27446957 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
205
               

               
Alignm identity:
               
148
               

               
Alignm E-value:
               
3e-26
               

               
Alignm gaps (pig, cow):
               
71, 155
               

               
Conread position:
               
158-312
               

               
Cow position:
               
chrX:46909887-46910043 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
161
               

               
Alignm identity:
               
122
               

               
Alignm E-value:
               
2e-23
               

               
Alignm gaps (pig, cow):
               
76, 66
               

               
Conread position:
               
159-301
               

               
Cow position:
               
chrX:22074873-22075019 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
149
               

               
Alignm identity:
               
117
               

               
Alignm E-value:
               
2e-25
               

               
Alignm gaps (pig, cow):
               
72, 107
               

               
Conread position:
               
163-316
               

               
Cow position:
               
chrX:35029849-35029699 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
156
               

               
Alignm identity:
               
129
               

               
Alignm E-value:
               
6e-34
               

               
Alignm gaps (pig, cow):
               
80, 53
               

               
Conread position:
               
164-315
               

               
Cow position:
               
chrX:1571511-1571360 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
154
               

               
Alignm identity:
               
113
               

               
Alignm E-value:
               
5e-22
               

               
Alignm gaps (pig, cow):
               
80, 141
               

               
Conread position:
               
164-316
               

               
Cow position:
               
chrX:43059173-43059016 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
158
               

               
Alignm identity:
               
123
               

               
Alignm E-value:
               
4e-29
               

               
Alignm gaps (pig, cow):
               
76, 0
               

               
Conread position:
               
164-317
               

               
Cow position:
               
chrX:27206878-27207034 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
161
               

               
Alignm identity:
               
126
               

               
Alignm E-value:
               
3e-26
               

               
Alignm gaps (pig, cow):
               
63, 113
               

               
Conread position:
               
167-304
               

               
Cow position:
               
chrX:34367065-34367197 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
138
               

               
Alignm identity:
               
106
               

               
Alignm E-value:
               
5e-22
               

               
Alignm gaps (pig, cow):
               
57, 0
               

               
Conread position:
               
167-315
               

               
Cow position:
               
chrX:27415499-27415350 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
153
               

               
Alignm identity:
               
115
               

               
Alignm E-value:
               
2e-22
               

               
Alignm gaps (pig, cow):
               
68, 48
               

               
Conread position:
               
168-367
               

               
Cow position:
               
chrX:43028314-43028516 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
207
               

               
Alignm identity:
               
151
               

               
Alignm E-value:
               
3e-28
               

               
Alignm gaps (pig, cow):
               
60, 141
               

               
Conread position:
               
169-304
               

               
Cow position:
               
chrX:31279841-31279700 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
142
               

               
Alignm identity:
               
117
               

               
Alignm E-value:
               
1e-29
               

               
Alignm gaps (pig, cow):
               
59, 0
               

               
Conread position:
               
169-308
               

               
Cow position:
               
chrX:20710255-20710389 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
140
               

               
Alignm identity:
               
105
               

               
Alignm E-value:
               
5e-21
               

               
Alignm gaps (pig, cow):
               
51, 0
               

               
Conread position:
               
169-370
               

               
Cow position:
               
chrX:45699892-45699686 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
209
               

               
Alignm identity:
               
142
               

               
Alignm E-value:
               
5e-21
               

               
Alignm gaps (pig, cow):
               
53, 175
               

               
Conread position:
               
172-304
               

               
Cow position:
               
chrX:37176960-37177094 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
141
               

               
Alignm identity:
               
112
               

               
Alignm E-value:
               
2e-21
               

               
Alignm gaps (pig, cow):
               
73, 46
               

               
Conread position:
               
172-324
               

               
Cow position:
               
chrX:40108257-40108096 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
162
               

               
Alignm identity:
               
121
               

               
Alignm E-value:
               
6e-23
               

               
Alignm gaps (pig, cow):
               
62, 0
               

               
Conread position:
               
174-304
               

               
Cow position:
               
chrX:4399207-4399345 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
139
               

               
Alignm identity:
               
108
               

               
Alignm E-value:
               
2e-22
               

               
Alignm gaps (pig, cow):
               
62, 0
               

               
Conread position:
               
178-327
               

               
Cow position:
               
chrX:13892909-13893054 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
150
               

               
Alignm identity:
               
114
               

               
Alignm E-value:
               
7e-25
               

               
Alignm gaps (pig, cow):
               
46, 0
               

               
Conread position:
               
179-317
               

               
Cow position:
               
chrX:38727046-38726904 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
144
               

               
Alignm identity:
               
113
               

               
Alignm E-value:
               
7e-25
               

               
Alignm gaps (pig, cow):
               
9, 79
               

               
Conread position:
               
180-348
               

               
Cow position:
               
chrX:42216537-42216361 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
178
               

               
Alignm identity:
               
131
               

               
Alignm E-value:
               
2e-22
               

               
Alignm gaps (pig, cow):
               
48, 167
               

               
Conread position:
               
185-316
               

               
Cow position:
               
chrX:20666794-20666665 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
132
               

               
Alignm identity:
               
103
               

               
Alignm E-value:
               
7e-25
               

               
Alignm gaps (pig, cow):
               
120, 0
               

               
Conread position:
               
188-318
               

               
Cow position:
               
chrX:29542125-29541988 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
139
               

               
Alignm identity:
               
111
               

               
Alignm E-value:
               
2e-24
               

               
Alignm gaps (pig, cow):
               
34, 129
               

               
Conread position:
               
217-316
               

               
Cow position:
               
chrX:11717586-11717485 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
102
               

               
Alignm identity:
               
85
               

               
Alignm E-value:
               
2e-21
               

               
Alignm gaps (pig, cow):
               
10, 0
               

               
Conread position:
               
231-315
               

               
Cow position:
               
chrX:33153669-33153756 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
88
               

               
Alignm identity:
               
79
               

               
Alignm E-value:
               
5e-22
               

               
Alignm gaps (pig, cow):
               
75, 0
               
Show alignments to all cow chromosomes.