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Cow genome map

           
Conread name:
           
Utr1-UTR01D050106
        

               
Conread position:
               
1-479
               

               
Cow position:
               
chr17:25167821-25168307 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
500
               

               
Alignm identity:
               
363
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
129, 195
               

               
Conread position:
               
1-559
               

               
Cow position:
               
chr17:27305685-27306226 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
564
               

               
Alignm identity:
               
413
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
376, 138
               

               
Conread position:
               
1-561
               

               
Cow position:
               
chr17:3470951-3471487 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
566
               

               
Alignm identity:
               
416
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
270, 162
               

               
Conread position:
               
1-564
               

               
Cow position:
               
chr17:24549689-24550248 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
572
               

               
Alignm identity:
               
436
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
166, 184
               

               
Conread position:
               
1-620
               

               
Cow position:
               
chr17:28539561-28540153 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
625
               

               
Alignm identity:
               
455
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
143, 63
               

               
Conread position:
               
1-623
               

               
Cow position:
               
chr17:30539729-30539135 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
625
               

               
Alignm identity:
               
457
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
456, 183
               

               
Conread position:
               
1-632
               

               
Cow position:
               
chr17:13144157-13143548 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
638
               

               
Alignm identity:
               
453
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
455, 47
               

               
Conread position:
               
1-635
               

               
Cow position:
               
chr17:20233756-20234373 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
643
               

               
Alignm identity:
               
443
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
355, 70
               

               
Conread position:
               
1-640
               

               
Cow position:
               
chr17:5896391-5895767 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
645
               

               
Alignm identity:
               
468
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
141, 23
               

               
Conread position:
               
1-654
               

               
Cow position:
               
chr17:2034063-2034694 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
666
               

               
Alignm identity:
               
456
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
63, 173
               

               
Conread position:
               
1-662
               

               
Cow position:
               
chr17:14249515-14248834 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
700
               

               
Alignm identity:
               
489
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
78, 182
               

               
Conread position:
               
1-719
               

               
Cow position:
               
chr17:6565999-6566704 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
737
               

               
Alignm identity:
               
535
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
477, 183
               

               
Conread position:
               
1-740
               

               
Cow position:
               
chr17:17221865-17222584 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
747
               

               
Alignm identity:
               
528
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
359, 187
               

               
Conread position:
               
1-741
               

               
Cow position:
               
chr17:30664797-30665510 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
745
               

               
Alignm identity:
               
542
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
177, 47
               

               
Conread position:
               
1-743
               

               
Cow position:
               
chr17:18201295-18202005 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
747
               

               
Alignm identity:
               
517
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
46, 189
               

               
Conread position:
               
1-744
               

               
Cow position:
               
chr17:22563710-22564422 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
756
               

               
Alignm identity:
               
526
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
133, 103
               

               
Conread position:
               
1-745
               

               
Cow position:
               
chr17:12289898-12289164 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
756
               

               
Alignm identity:
               
552
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
269, 23
               

               
Conread position:
               
1-760
               

               
Cow position:
               
chr17:22774910-22775629 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
768
               

               
Alignm identity:
               
540
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
139, 185
               

               
Conread position:
               
1-763
               

               
Cow position:
               
chr17:14034140-14033374 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
787
               

               
Alignm identity:
               
549
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
77, 200
               

               
Conread position:
               
1-764
               

               
Cow position:
               
chr17:14050661-14049945 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
766
               

               
Alignm identity:
               
522
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
455, 49
               

               
Conread position:
               
1-766
               

               
Cow position:
               
chr17:5899892-5900648 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
794
               

               
Alignm identity:
               
510
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
74, 203
               

               
Conread position:
               
1-766
               

               
Cow position:
               
chr17:21960167-21959416 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
780
               

               
Alignm identity:
               
560
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
90, 192
               

               
Conread position:
               
1-767
               

               
Cow position:
               
chr17:28024320-28023558 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
780
               

               
Alignm identity:
               
501
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
390, 86
               

               
Conread position:
               
1-768
               

               
Cow position:
               
chr17:25188806-25189556 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
784
               

               
Alignm identity:
               
548
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
35, 107
               

               
Conread position:
               
1-773
               

               
Cow position:
               
chr17:13940797-13940044 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
779
               

               
Alignm identity:
               
533
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
168, 98
               

               
Conread position:
               
1-776
               

               
Cow position:
               
chr17:10529225-10528452 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
791
               

               
Alignm identity:
               
566
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
79, 191
               

               
Conread position:
               
2-498
               

               
Cow position:
               
chr17:31232418-31231924 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
506
               

               
Alignm identity:
               
360
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
248, 67
               

               
Conread position:
               
2-511
               

               
Cow position:
               
chr17:21874796-21874287 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
521
               

               
Alignm identity:
               
391
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
138, 183
               

               
Conread position:
               
2-757
               

               
Cow position:
               
chr17:16446911-16446169 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
763
               

               
Alignm identity:
               
530
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
57, 194
               

               
Conread position:
               
5-598
               

               
Cow position:
               
chr17:39735707-39736279 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
602
               

               
Alignm identity:
               
409
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
134, 34
               

               
Conread position:
               
5-736
               

               
Cow position:
               
chr17:26230463-26231202 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
752
               

               
Alignm identity:
               
557
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
370, 179
               

               
Conread position:
               
5-742
               

               
Cow position:
               
chr17:20780043-20780768 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
751
               

               
Alignm identity:
               
541
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
382, 182
               

               
Conread position:
               
5-744
               

               
Cow position:
               
chr17:14026377-14025661 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
750
               

               
Alignm identity:
               
529
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
67, 38
               

               
Conread position:
               
5-747
               

               
Cow position:
               
chr17:20093593-20092881 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
751
               

               
Alignm identity:
               
520
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
451, 15
               

               
Conread position:
               
5-747
               

               
Cow position:
               
chr17:40771349-40772078 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
753
               

               
Alignm identity:
               
542
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
132, 169
               

               
Conread position:
               
5-751
               

               
Cow position:
               
chr17:11216356-11215641 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
755
               

               
Alignm identity:
               
529
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
73, 109
               

               
Conread position:
               
5-753
               

               
Cow position:
               
chr17:29292852-29292136 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
759
               

               
Alignm identity:
               
536
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
75, 187
               

               
Conread position:
               
5-765
               

               
Cow position:
               
chr17:21973608-21972861 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
767
               

               
Alignm identity:
               
540
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
34, 188
               

               
Conread position:
               
6-747
               

               
Cow position:
               
chr17:20848061-20848776 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
749
               

               
Alignm identity:
               
525
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
450, 175
               

               
Conread position:
               
6-752
               

               
Cow position:
               
chr17:29472006-29472710 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
749
               

               
Alignm identity:
               
537
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
80, 183
               

               
Conread position:
               
7-741
               

               
Cow position:
               
chr17:5898999-5898282 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
748
               

               
Alignm identity:
               
504
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
229, 19
               

               
Conread position:
               
8-454
               

               
Cow position:
               
chr17:43527508-43527940 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
449
               

               
Alignm identity:
               
335
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
119, 178
               

               
Conread position:
               
13-455
               

               
Cow position:
               
chr17:16117898-16117459 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
450
               

               
Alignm identity:
               
351
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
172, 46
               

               
Conread position:
               
17-461
               

               
Cow position:
               
chr17:3386835-3387258 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
450
               

               
Alignm identity:
               
347
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
395, 19
               

               
Conread position:
               
17-758
               

               
Cow position:
               
chr17:33272125-33271413 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
760
               

               
Alignm identity:
               
532
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
395, 47
               

               
Conread position:
               
17-765
               

               
Cow position:
               
chr17:32138863-32138153 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
761
               

               
Alignm identity:
               
529
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
46, 97
               

               
Conread position:
               
18-764
               

               
Cow position:
               
chr17:32027920-32027183 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
758
               

               
Alignm identity:
               
547
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
276, 38
               

               
Conread position:
               
20-594
               

               
Cow position:
               
chr17:12059553-12058992 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
583
               

               
Alignm identity:
               
427
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
239, 128
               

               
Conread position:
               
23-747
               

               
Cow position:
               
chr17:32989037-32989720 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
726
               

               
Alignm identity:
               
512
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
629, 66
               

               
Conread position:
               
23-747
               

               
Cow position:
               
chr17:32994069-32993380 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
726
               

               
Alignm identity:
               
514
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
629, 66
               

               
Conread position:
               
33-547
               

               
Cow position:
               
chr17:5246433-5246948 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
532
               

               
Alignm identity:
               
373
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
45, 57
               

               
Conread position:
               
37-728
               

               
Cow position:
               
chr17:30529972-30529318 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
695
               

               
Alignm identity:
               
488
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
669, 74
               

               
Conread position:
               
38-598
               

               
Cow position:
               
chr17:21336139-21335587 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
568
               

               
Alignm identity:
               
427
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
337, 41
               

               
Conread position:
               
41-631
               

               
Cow position:
               
chr17:21494944-21495529 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
608
               

               
Alignm identity:
               
432
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
347, 48
               

               
Conread position:
               
41-764
               

               
Cow position:
               
chr17:23063275-23063987 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
732
               

               
Alignm identity:
               
517
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
382, 127
               

               
Conread position:
               
42-744
               

               
Cow position:
               
chr17:20993481-20992793 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
712
               

               
Alignm identity:
               
525
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
105, 148
               

               
Conread position:
               
47-742
               

               
Cow position:
               
chr17:20022944-20022272 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
699
               

               
Alignm identity:
               
467
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
409, 57
               

               
Conread position:
               
54-512
               

               
Cow position:
               
chr17:11056803-11056351 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
466
               

               
Alignm identity:
               
362
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
103, 67
               

               
Conread position:
               
54-598
               

               
Cow position:
               
chr17:18592012-18592547 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
551
               

               
Alignm identity:
               
393
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
199, 47
               

               
Conread position:
               
58-599
               

               
Cow position:
               
chr17:34595515-34596046 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
554
               

               
Alignm identity:
               
396
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
106, 132
               

               
Conread position:
               
58-763
               

               
Cow position:
               
chr17:11618158-11618849 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
716
               

               
Alignm identity:
               
521
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
178, 66
               

               
Conread position:
               
65-565
               

               
Cow position:
               
chr17:3781619-3782119 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
512
               

               
Alignm identity:
               
376
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
104, 120
               

               
Conread position:
               
65-601
               

               
Cow position:
               
chr17:26764597-26765131 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
553
               

               
Alignm identity:
               
394
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
58, 127
               

               
Conread position:
               
65-765
               

               
Cow position:
               
chr17:11839290-11839989 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
726
               

               
Alignm identity:
               
519
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
310, 23
               

               
Conread position:
               
69-764
               

               
Cow position:
               
chr17:5730517-5731181 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
698
               

               
Alignm identity:
               
470
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
279, 9
               

               
Conread position:
               
70-767
               

               
Cow position:
               
chr17:11035511-11036184 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
707
               

               
Alignm identity:
               
484
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
280, 110
               

               
Conread position:
               
71-561
               

               
Cow position:
               
chr17:8690868-8690373 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
509
               

               
Alignm identity:
               
365
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
63, 123
               

               
Conread position:
               
71-741
               

               
Cow position:
               
chr17:33934156-33933506 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
682
               

               
Alignm identity:
               
462
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
202, 113
               

               
Conread position:
               
71-770
               

               
Cow position:
               
chr17:11382125-11381453 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
707
               

               
Alignm identity:
               
503
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
263, 117
               

               
Conread position:
               
73-644
               

               
Cow position:
               
chr17:18861127-18860565 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
579
               

               
Alignm identity:
               
442
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
7, 112
               

               
Conread position:
               
74-598
               

               
Cow position:
               
chr17:923473-923984 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
528
               

               
Alignm identity:
               
388
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
339, 110
               

               
Conread position:
               
85-474
               

               
Cow position:
               
chr17:3499066-3498680 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
399
               

               
Alignm identity:
               
303
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
62, 109
               

               
Conread position:
               
89-696
               

               
Cow position:
               
chr17:1493548-1492949 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
616
               

               
Alignm identity:
               
429
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
287, 95
               

               
Conread position:
               
96-747
               

               
Cow position:
               
chr17:21293435-21292790 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
666
               

               
Alignm identity:
               
461
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
93, 115
               

               
Conread position:
               
112-759
               

               
Cow position:
               
chr17:6937026-6936418 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
654
               

               
Alignm identity:
               
458
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
52, 30
               

               
Conread position:
               
112-767
               

               
Cow position:
               
chr17:13922110-13922750 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
663
               

               
Alignm identity:
               
471
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
263, 36
               

               
Conread position:
               
114-740
               

               
Cow position:
               
chr17:20033279-20032667 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
633
               

               
Alignm identity:
               
439
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
261, 34
               

               
Conread position:
               
123-475
               

               
Cow position:
               
chr17:3518597-3518268 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
360
               

               
Alignm identity:
               
262
               

               
Alignm E-value:
               
9.80909e-45
               

               
Alignm gaps (pig, cow):
               
137, 61
               

               
Conread position:
               
125-760
               

               
Cow position:
               
chr17:18490183-18490794 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
642
               

               
Alignm identity:
               
441
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
256, 7
               

               
Conread position:
               
127-739
               

               
Cow position:
               
chr17:11397316-11397907 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
622
               

               
Alignm identity:
               
428
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
248, 57
               

               
Conread position:
               
129-598
               

               
Cow position:
               
chr17:40421308-40421776 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
479
               

               
Alignm identity:
               
321
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
13, 64
               

               
Conread position:
               
130-577
               

               
Cow position:
               
chr17:20082134-20081714 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
449
               

               
Alignm identity:
               
293
               

               
Alignm E-value:
               
1e-34
               

               
Alignm gaps (pig, cow):
               
12, 65
               

               
Conread position:
               
130-730
               

               
Cow position:
               
chr17:43717660-43717109 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
605
               

               
Alignm identity:
               
416
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
12, 52
               

               
Conread position:
               
131-735
               

               
Cow position:
               
chr17:40289350-40288739 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
632
               

               
Alignm identity:
               
439
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
212, 57
               

               
Conread position:
               
133-747
               

               
Cow position:
               
chr17:9853638-9854229 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
622
               

               
Alignm identity:
               
433
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
214, 55
               

               
Conread position:
               
135-743
               

               
Cow position:
               
chr17:12929889-12929284 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
622
               

               
Alignm identity:
               
419
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
240, 46
               

               
Conread position:
               
141-600
               

               
Cow position:
               
chr17:8280066-8279600 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
482
               

               
Alignm identity:
               
324
               

               
Alignm E-value:
               
3.00004e-41
               

               
Alignm gaps (pig, cow):
               
103, 38
               

               
Conread position:
               
142-464
               

               
Cow position:
               
chr17:15893565-15893879 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
328
               

               
Alignm identity:
               
232
               

               
Alignm E-value:
               
9.99967e-42
               

               
Alignm gaps (pig, cow):
               
232, 42
               

               
Conread position:
               
147-743
               

               
Cow position:
               
chr17:24883897-24883327 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
602
               

               
Alignm identity:
               
415
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
213, 45
               

               
Conread position:
               
148-752
               

               
Cow position:
               
chr17:24077073-24077640 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
608
               

               
Alignm identity:
               
431
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
237, 36
               

               
Conread position:
               
149-566
               

               
Cow position:
               
chr17:26182890-26183301 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
424
               

               
Alignm identity:
               
314
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
268, 43
               

               
Conread position:
               
149-766
               

               
Cow position:
               
chr17:21680436-21681060 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
648
               

               
Alignm identity:
               
447
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
226, 32
               

               
Conread position:
               
153-765
               

               
Cow position:
               
chr17:27795320-27795922 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
626
               

               
Alignm identity:
               
448
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
146, 31
               

               
Conread position:
               
162-760
               

               
Cow position:
               
chr17:25875090-25875654 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
606
               

               
Alignm identity:
               
421
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
103, 26
               

               
Conread position:
               
163-598
               

               
Cow position:
               
chr17:43142038-43141604 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
445
               

               
Alignm identity:
               
322
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
73, 21
               

               
Conread position:
               
165-494
               

               
Cow position:
               
chr17:4606656-4606960 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
331
               

               
Alignm identity:
               
242
               

               
Alignm E-value:
               
4.06377e-44
               

               
Alignm gaps (pig, cow):
               
291, 19
               

               
Conread position:
               
169-541
               

               
Cow position:
               
chr17:21313132-21312761 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
380
               

               
Alignm identity:
               
268
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
115, 228
               

               
Conread position:
               
189-762
               

               
Cow position:
               
chr17:38614666-38615225 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
576
               

               
Alignm identity:
               
402
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
234, 16
               

               
Conread position:
               
202-550
               

               
Cow position:
               
chr17:1295855-1295514 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
350
               

               
Alignm identity:
               
268
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
254, 63
               

               
Conread position:
               
202-597
               

               
Cow position:
               
chr17:5224119-5224503 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
399
               

               
Alignm identity:
               
289
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
219, 63
               

               
Conread position:
               
202-599
               

               
Cow position:
               
chr17:30718700-30718312 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
399
               

               
Alignm identity:
               
289
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
254, 43
               

               
Conread position:
               
202-653
               

               
Cow position:
               
chr17:1783890-1783445 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
458
               

               
Alignm identity:
               
324
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
173, 63
               

               
Conread position:
               
202-719
               

               
Cow position:
               
chr17:2810332-2810853 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
538
               

               
Alignm identity:
               
373
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
79, 22
               

               
Conread position:
               
202-740
               

               
Cow position:
               
chr17:22032967-22032447 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
555
               

               
Alignm identity:
               
395
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
173, 63
               

               
Conread position:
               
202-746
               

               
Cow position:
               
chr17:24973666-24974190 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
548
               

               
Alignm identity:
               
374
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
175, 63
               

               
Conread position:
               
202-747
               

               
Cow position:
               
chr17:15664385-15664924 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
553
               

               
Alignm identity:
               
400
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
212, 63
               

               
Conread position:
               
202-752
               

               
Cow position:
               
chr17:18720728-18720199 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
555
               

               
Alignm identity:
               
393
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
216, 44
               

               
Conread position:
               
202-752
               

               
Cow position:
               
chr17:40331485-40332031 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
564
               

               
Alignm identity:
               
388
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
34, 41
               

               
Conread position:
               
204-598
               

               
Cow position:
               
chr17:17121394-17121776 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
397
               

               
Alignm identity:
               
279
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
42, 63
               

               
Conread position:
               
205-762
               

               
Cow position:
               
chr17:8544027-8544591 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
578
               

               
Alignm identity:
               
409
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
45, 58
               

               
Conread position:
               
208-550
               

               
Cow position:
               
chr17:242361-242695 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
345
               

               
Alignm identity:
               
253
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
196, 36
               

               
Conread position:
               
208-758
               

               
Cow position:
               
chr17:34079376-34078849 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
558
               

               
Alignm identity:
               
391
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
444, 57
               

               
Conread position:
               
208-765
               

               
Cow position:
               
chr17:25900921-25901473 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
571
               

               
Alignm identity:
               
384
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
167, 57
               

               
Conread position:
               
211-455
               

               
Cow position:
               
chr17:40312453-40312690 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
249
               

               
Alignm identity:
               
199
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
164, 41
               

               
Conread position:
               
211-727
               

               
Cow position:
               
chr17:5350391-5349895 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
524
               

               
Alignm identity:
               
344
               

               
Alignm E-value:
               
3.00018e-42
               

               
Alignm gaps (pig, cow):
               
68, 116
               

               
Conread position:
               
211-747
               

               
Cow position:
               
chr17:9117368-9117929 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
574
               

               
Alignm identity:
               
408
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
159, 54
               

               
Conread position:
               
214-499
               

               
Cow position:
               
chr17:20126349-20126620 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
289
               

               
Alignm identity:
               
217
               

               
Alignm E-value:
               
1.4013e-45
               

               
Alignm gaps (pig, cow):
               
161, 51
               

               
Conread position:
               
214-741
               

               
Cow position:
               
chr17:11278294-11277785 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
532
               

               
Alignm identity:
               
363
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
221, 51
               

               
Conread position:
               
215-598
               

               
Cow position:
               
chr17:25796611-25796232 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
389
               

               
Alignm identity:
               
286
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
160, 47
               

               
Conread position:
               
216-735
               

               
Cow position:
               
chr17:11296367-11296875 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
535
               

               
Alignm identity:
               
373
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
7, 34
               

               
Conread position:
               
220-595
               

               
Cow position:
               
chr17:37163795-37163428 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
383
               

               
Alignm identity:
               
285
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
157, 79
               

               
Conread position:
               
220-597
               

               
Cow position:
               
chr17:8079051-8079416 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
383
               

               
Alignm identity:
               
279
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
16, 22
               

               
Conread position:
               
221-548
               

               
Cow position:
               
chr17:42347486-42347169 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
329
               

               
Alignm identity:
               
250
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
235, 44
               

               
Conread position:
               
223-705
               

               
Cow position:
               
chr17:4612339-4611855 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
497
               

               
Alignm identity:
               
336
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
76, 29
               

               
Conread position:
               
225-737
               

               
Cow position:
               
chr17:21115206-21114717 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
513
               

               
Alignm identity:
               
346
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
27, 0
               

               
Conread position:
               
231-550
               

               
Cow position:
               
chr17:21031532-21031844 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
324
               

               
Alignm identity:
               
243
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
7, 35
               

               
Conread position:
               
233-746
               

               
Cow position:
               
chr17:31481295-31480783 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
534
               

               
Alignm identity:
               
378
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
138, 32
               

               
Conread position:
               
235-475
               

               
Cow position:
               
chr17:27142504-27142744 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
246
               

               
Alignm identity:
               
183
               

               
Alignm E-value:
               
3e-40
               

               
Alignm gaps (pig, cow):
               
139, 5
               

               
Conread position:
               
238-743
               

               
Cow position:
               
chr17:21004079-21003587 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
511
               

               
Alignm identity:
               
356
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
143, 27
               

               
Conread position:
               
238-773
               

               
Cow position:
               
chr17:17059192-17059692 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
538
               

               
Alignm identity:
               
365
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
272, 27
               

               
Conread position:
               
241-756
               

               
Cow position:
               
chr17:16371005-16371514 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
525
               

               
Alignm identity:
               
372
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
134, 61
               

               
Conread position:
               
246-730
               

               
Cow position:
               
chr17:7132700-7132193 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
511
               

               
Alignm identity:
               
368
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
14, 56
               

               
Conread position:
               
247-598
               

               
Cow position:
               
chr17:553203-552865 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
367
               

               
Alignm identity:
               
260
               

               
Alignm E-value:
               
4e-32
               

               
Alignm gaps (pig, cow):
               
96, 18
               

               
Conread position:
               
247-759
               

               
Cow position:
               
chr17:21599922-21599421 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
520
               

               
Alignm identity:
               
335
               

               
Alignm E-value:
               
3.00018e-42
               

               
Alignm gaps (pig, cow):
               
53, 44
               

               
Conread position:
               
248-739
               

               
Cow position:
               
chr17:11664826-11664337 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
505
               

               
Alignm identity:
               
353
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
127, 17
               

               
Conread position:
               
249-595
               

               
Cow position:
               
chr17:24580537-24580192 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
355
               

               
Alignm identity:
               
259
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
126, 19
               

               
Conread position:
               
250-489
               

               
Cow position:
               
chr17:5380730-5380969 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
246
               

               
Alignm identity:
               
185
               

               
Alignm E-value:
               
8e-39
               

               
Alignm gaps (pig, cow):
               
125, 15
               

               
Conread position:
               
250-516
               

               
Cow position:
               
chr17:4721251-4721517 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
274
               

               
Alignm identity:
               
209
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
162, 15
               

               
Conread position:
               
250-565
               

               
Cow position:
               
chr17:25335620-25335321 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
318
               

               
Alignm identity:
               
210
               

               
Alignm E-value:
               
5e-24
               

               
Alignm gaps (pig, cow):
               
206, 15
               

               
Conread position:
               
251-589
               

               
Cow position:
               
chr17:14848757-14848446 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
341
               

               
Alignm identity:
               
253
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
205, 14
               

               
Conread position:
               
253-777
               

               
Cow position:
               
chr17:32419352-32418844 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
533
               

               
Alignm identity:
               
375
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
122, 13
               

               
Conread position:
               
259-739
               

               
Cow position:
               
chr17:6423530-6423994 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
488
               

               
Alignm identity:
               
338
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
16, 46
               

               
Conread position:
               
259-743
               

               
Cow position:
               
chr17:34948411-34948881 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
494
               

               
Alignm identity:
               
341
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
172, 40
               

               
Conread position:
               
259-749
               

               
Cow position:
               
chr17:17410069-17410550 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
498
               

               
Alignm identity:
               
356
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
197, 40
               

               
Conread position:
               
259-765
               

               
Cow position:
               
chr17:15684276-15684769 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
517
               

               
Alignm identity:
               
368
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
97, 40
               

               
Conread position:
               
262-646
               

               
Cow position:
               
chr17:20839784-20839415 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
386
               

               
Alignm identity:
               
244
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
194, 37
               

               
Conread position:
               
262-725
               

               
Cow position:
               
chr17:39771170-39771628 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
477
               

               
Alignm identity:
               
317
               

               
Alignm E-value:
               
3.00018e-42
               

               
Alignm gaps (pig, cow):
               
115, 40
               

               
Conread position:
               
262-753
               

               
Cow position:
               
chr17:20157391-20157863 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
500
               

               
Alignm identity:
               
346
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
194, 37
               

               
Conread position:
               
263-650
               

               
Cow position:
               
chr17:41290242-41289866 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
392
               

               
Alignm identity:
               
290
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
116, 48
               

               
Conread position:
               
265-440
               

               
Cow position:
               
chr17:20337572-20337739 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
176
               

               
Alignm identity:
               
133
               

               
Alignm E-value:
               
2e-28
               

               
Alignm gaps (pig, cow):
               
24, 0
               

               
Conread position:
               
265-598
               

               
Cow position:
               
chr17:27047940-27048260 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
336
               

               
Alignm identity:
               
253
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
31, 41
               

               
Conread position:
               
269-743
               

               
Cow position:
               
chr17:11281326-11280847 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
494
               

               
Alignm identity:
               
358
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
170, 36
               

               
Conread position:
               
270-744
               

               
Cow position:
               
chr17:32279125-32278660 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
484
               

               
Alignm identity:
               
341
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
114, 32
               

               
Conread position:
               
273-594
               

               
Cow position:
               
chr17:21628268-21628579 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
325
               

               
Alignm identity:
               
239
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
150, 8
               

               
Conread position:
               
274-553
               

               
Cow position:
               
chr17:33926335-33926063 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
285
               

               
Alignm identity:
               
204
               

               
Alignm E-value:
               
2e-37
               

               
Alignm gaps (pig, cow):
               
96, 24
               

               
Conread position:
               
274-559
               

               
Cow position:
               
chr17:21323086-21323342 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
288
               

               
Alignm identity:
               
214
               

               
Alignm E-value:
               
2e-37
               

               
Alignm gaps (pig, cow):
               
138, 19
               

               
Conread position:
               
274-568
               

               
Cow position:
               
chr17:9778037-9778318 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
296
               

               
Alignm identity:
               
230
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
182, 25
               

               
Conread position:
               
274-599
               

               
Cow position:
               
chr17:9746307-9746618 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
327
               

               
Alignm identity:
               
242
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
182, 25
               

               
Conread position:
               
274-702
               

               
Cow position:
               
chr17:25097249-25097656 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
432
               

               
Alignm identity:
               
303
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
82, 31
               

               
Conread position:
               
274-740
               

               
Cow position:
               
chr17:24587404-24587864 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
475
               

               
Alignm identity:
               
337
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
20, 32
               

               
Conread position:
               
274-742
               

               
Cow position:
               
chr17:24004181-24004615 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
471
               

               
Alignm identity:
               
302
               

               
Alignm E-value:
               
7e-28
               

               
Alignm gaps (pig, cow):
               
379, 9
               

               
Conread position:
               
274-742
               

               
Cow position:
               
chr17:32472005-32471547 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
479
               

               
Alignm identity:
               
329
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
103, 25
               

               
Conread position:
               
274-747
               

               
Cow position:
               
chr17:30713139-30713593 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
483
               

               
Alignm identity:
               
327
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
86, 25
               

               
Conread position:
               
275-550
               

               
Cow position:
               
chr17:18884560-18884273 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
292
               

               
Alignm identity:
               
227
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
71, 24
               

               
Conread position:
               
275-555
               

               
Cow position:
               
chr17:9079399-9079142 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
282
               

               
Alignm identity:
               
205
               

               
Alignm E-value:
               
1e-33
               

               
Alignm gaps (pig, cow):
               
23, 31
               

               
Conread position:
               
275-741
               

               
Cow position:
               
chr17:4225704-4225244 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
475
               

               
Alignm identity:
               
311
               

               
Alignm E-value:
               
4.06377e-44
               

               
Alignm gaps (pig, cow):
               
325, 24
               

               
Conread position:
               
276-486
               

               
Cow position:
               
chr17:21710293-21710502 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
215
               

               
Alignm identity:
               
170
               

               
Alignm E-value:
               
1.00053e-42
               

               
Alignm gaps (pig, cow):
               
84, 23
               

               
Conread position:
               
276-759
               

               
Cow position:
               
chr17:21739096-21738605 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
496
               

               
Alignm identity:
               
362
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
99, 23
               

               
Conread position:
               
276-761
               

               
Cow position:
               
chr17:40741435-40741916 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
497
               

               
Alignm identity:
               
361
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
172, 23
               

               
Conread position:
               
277-598
               

               
Cow position:
               
chr17:31231325-31231018 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
326
               

               
Alignm identity:
               
229
               

               
Alignm E-value:
               
6e-37
               

               
Alignm gaps (pig, cow):
               
100, 22
               

               
Conread position:
               
277-654
               

               
Cow position:
               
chr17:21755652-21755269 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
394
               

               
Alignm identity:
               
277
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
97, 22
               

               
Conread position:
               
278-495
               

               
Cow position:
               
chr17:22781482-22781696 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
223
               

               
Alignm identity:
               
173
               

               
Alignm E-value:
               
8e-40
               

               
Alignm gaps (pig, cow):
               
99, 21
               

               
Conread position:
               
279-554
               

               
Cow position:
               
chr17:2839681-2839970 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
296
               

               
Alignm identity:
               
208
               

               
Alignm E-value:
               
1e-30
               

               
Alignm gaps (pig, cow):
               
101, 20
               

               
Conread position:
               
279-599
               

               
Cow position:
               
chr17:38646859-38647167 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
323
               

               
Alignm identity:
               
232
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
225, 21
               

               
Conread position:
               
281-643
               

               
Cow position:
               
chr17:6624051-6624404 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
365
               

               
Alignm identity:
               
272
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
175, 18
               

               
Conread position:
               
281-731
               

               
Cow position:
               
chr17:33052656-33053086 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
460
               

               
Alignm identity:
               
315
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
173, 21
               

               
Conread position:
               
282-563
               

               
Cow position:
               
chr17:20912692-20912958 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
284
               

               
Alignm identity:
               
214
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
223, 20
               

               
Conread position:
               
282-592
               

               
Cow position:
               
chr17:21243992-21243691 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
315
               

               
Alignm identity:
               
220
               

               
Alignm E-value:
               
8e-39
               

               
Alignm gaps (pig, cow):
               
95, 20
               

               
Conread position:
               
282-746
               

               
Cow position:
               
chr17:1035810-1035346 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
474
               

               
Alignm identity:
               
338
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
18, 215
               

               
Conread position:
               
285-747
               

               
Cow position:
               
chr17:12447601-12447154 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
468
               

               
Alignm identity:
               
306
               

               
Alignm E-value:
               
8e-39
               

               
Alignm gaps (pig, cow):
               
171, 18
               

               
Conread position:
               
285-752
               

               
Cow position:
               
chr17:29356423-29355990 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
471
               

               
Alignm identity:
               
312
               

               
Alignm E-value:
               
1e-33
               

               
Alignm gaps (pig, cow):
               
174, 13
               

               
Conread position:
               
290-598
               

               
Cow position:
               
chr17:37480193-37479897 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
311
               

               
Alignm identity:
               
222
               

               
Alignm E-value:
               
9.99967e-42
               

               
Alignm gaps (pig, cow):
               
133, 96
               

               
Conread position:
               
291-563
               

               
Cow position:
               
chr17:32950073-32950345 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
278
               

               
Alignm identity:
               
202
               

               
Alignm E-value:
               
1.00053e-42
               

               
Alignm gaps (pig, cow):
               
84, 102
               

               
Conread position:
               
293-760
               

               
Cow position:
               
chr17:25999919-26000380 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
474
               

               
Alignm identity:
               
329
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
84, 129
               

               
Conread position:
               
294-727
               

               
Cow position:
               
chr17:24773487-24773904 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
437
               

               
Alignm identity:
               
298
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
84, 128
               

               
Conread position:
               
295-542
               

               
Cow position:
               
chr17:35311226-35311476 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
257
               

               
Alignm identity:
               
201
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
80, 152
               

               
Conread position:
               
295-587
               

               
Cow position:
               
chr17:7648025-7648306 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
298
               

               
Alignm identity:
               
211
               

               
Alignm E-value:
               
2e-35
               

               
Alignm gaps (pig, cow):
               
159, 88
               

               
Conread position:
               
295-746
               

               
Cow position:
               
chr17:24490327-24490788 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
470
               

               
Alignm identity:
               
318
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
82, 7
               

               
Conread position:
               
296-550
               

               
Cow position:
               
chr17:21697538-21697788 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
260
               

               
Alignm identity:
               
193
               

               
Alignm E-value:
               
8e-40
               

               
Alignm gaps (pig, cow):
               
75, 130
               

               
Conread position:
               
302-497
               

               
Cow position:
               
chr17:4824306-4824503 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
201
               

               
Alignm identity:
               
152
               

               
Alignm E-value:
               
4e-33
               

               
Alignm gaps (pig, cow):
               
69, 50
               

               
Conread position:
               
302-739
               

               
Cow position:
               
chr17:25611905-25612327 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
441
               

               
Alignm identity:
               
297
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
76, 84
               

               
Conread position:
               
302-740
               

               
Cow position:
               
chr17:12108616-12109049 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
445
               

               
Alignm identity:
               
298
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
68, 10
               

               
Conread position:
               
302-745
               

               
Cow position:
               
chr17:908558-908985 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
445
               

               
Alignm identity:
               
315
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
154, 108
               

               
Conread position:
               
302-754
               

               
Cow position:
               
chr17:12536656-12536219 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
455
               

               
Alignm identity:
               
307
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
154, 119
               

               
Conread position:
               
304-558
               

               
Cow position:
               
chr17:34208006-34207750 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
260
               

               
Alignm identity:
               
183
               

               
Alignm E-value:
               
4e-34
               

               
Alignm gaps (pig, cow):
               
71, 119
               

               
Conread position:
               
304-759
               

               
Cow position:
               
chr17:36454950-36454518 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
458
               

               
Alignm identity:
               
312
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
152, 20
               

               
Conread position:
               
306-761
               

               
Cow position:
               
chr17:36790955-36791385 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
461
               

               
Alignm identity:
               
307
               

               
Alignm E-value:
               
2e-38
               

               
Alignm gaps (pig, cow):
               
54, 64
               

               
Conread position:
               
309-718
               

               
Cow position:
               
chr17:36203671-36203264 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
424
               

               
Alignm identity:
               
291
               

               
Alignm E-value:
               
3.9937e-43
               

               
Alignm gaps (pig, cow):
               
116, 86
               

               
Conread position:
               
310-747
               

               
Cow position:
               
chr17:12946546-12946111 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
454
               

               
Alignm identity:
               
311
               

               
Alignm E-value:
               
1.4013e-45
               

               
Alignm gaps (pig, cow):
               
17, 11
               

               
Conread position:
               
311-756
               

               
Cow position:
               
chr17:8837128-8836695 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
450
               

               
Alignm identity:
               
310
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
145, 110
               

               
Conread position:
               
313-632
               

               
Cow position:
               
chr17:38363148-38362839 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
331
               

               
Alignm identity:
               
240
               

               
Alignm E-value:
               
8e-39
               

               
Alignm gaps (pig, cow):
               
143, 14
               

               
Conread position:
               
313-765
               

               
Cow position:
               
chr17:24149000-24149455 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
463
               

               
Alignm identity:
               
318
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
62, 183
               

               
Conread position:
               
315-473
               

               
Cow position:
               
chr17:36268221-36268374 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
159
               

               
Alignm identity:
               
121
               

               
Alignm E-value:
               
2e-26
               

               
Alignm gaps (pig, cow):
               
77, 0
               

               
Conread position:
               
315-741
               

               
Cow position:
               
chr17:10459111-10458693 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
432
               

               
Alignm identity:
               
296
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
141, 54
               

               
Conread position:
               
318-725
               

               
Cow position:
               
chr17:18419501-18419911 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
420
               

               
Alignm identity:
               
276
               

               
Alignm E-value:
               
2e-36
               

               
Alignm gaps (pig, cow):
               
72, 7
               

               
Conread position:
               
318-749
               

               
Cow position:
               
chr17:1634654-1634242 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
435
               

               
Alignm identity:
               
286
               

               
Alignm E-value:
               
6e-37
               

               
Alignm gaps (pig, cow):
               
179, 18
               

               
Conread position:
               
319-598
               

               
Cow position:
               
chr17:24821695-24821966 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
280
               

               
Alignm identity:
               
195
               

               
Alignm E-value:
               
6e-37
               

               
Alignm gaps (pig, cow):
               
104, 0
               

               
Conread position:
               
319-739
               

               
Cow position:
               
chr17:20932158-20932569 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
424
               

               
Alignm identity:
               
291
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
137, 103
               

               
Conread position:
               
322-678
               

               
Cow position:
               
chr17:30359310-30359662 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
371
               

               
Alignm identity:
               
258
               

               
Alignm E-value:
               
2e-35
               

               
Alignm gaps (pig, cow):
               
90, 26
               

               
Conread position:
               
322-752
               

               
Cow position:
               
chr17:21918042-21917597 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
454
               

               
Alignm identity:
               
308
               

               
Alignm E-value:
               
5.60519e-45
               

               
Alignm gaps (pig, cow):
               
101, 51
               

               
Conread position:
               
323-759
               

               
Cow position:
               
chr17:12306563-12306134 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
449
               

               
Alignm identity:
               
304
               

               
Alignm E-value:
               
4.06377e-44
               

               
Alignm gaps (pig, cow):
               
51, 105
               

               
Conread position:
               
324-747
               

               
Cow position:
               
chr17:27058720-27058302 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
432
               

               
Alignm identity:
               
304
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
6, 76
               

               
Conread position:
               
324-765
               

               
Cow position:
               
chr17:17683064-17682646 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
446
               

               
Alignm identity:
               
309
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
132, 53
               

               
Conread position:
               
325-598
               

               
Cow position:
               
chr17:979318-979062 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
275
               

               
Alignm identity:
               
201
               

               
Alignm E-value:
               
2e-38
               

               
Alignm gaps (pig, cow):
               
131, 46
               

               
Conread position:
               
327-740
               

               
Cow position:
               
chr17:7142701-7143097 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
415
               

               
Alignm identity:
               
301
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
129, 139
               

               
Conread position:
               
328-597
               

               
Cow position:
               
chr17:27261647-27261913 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
275
               

               
Alignm identity:
               
181
               

               
Alignm E-value:
               
3e-21
               

               
Alignm gaps (pig, cow):
               
47, 142
               

               
Conread position:
               
328-747
               

               
Cow position:
               
chr17:4106148-4105744 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
423
               

               
Alignm identity:
               
276
               

               
Alignm E-value:
               
7e-38
               

               
Alignm gaps (pig, cow):
               
317, 93
               

               
Conread position:
               
328-747
               

               
Cow position:
               
chr17:4121884-4121479 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
424
               

               
Alignm identity:
               
277
               

               
Alignm E-value:
               
2e-37
               

               
Alignm gaps (pig, cow):
               
309, 93
               

               
Conread position:
               
329-560
               

               
Cow position:
               
chr17:1353235-1353464 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
237
               

               
Alignm identity:
               
173
               

               
Alignm E-value:
               
1e-33
               

               
Alignm gaps (pig, cow):
               
94, 57
               

               
Conread position:
               
329-739
               

               
Cow position:
               
chr17:25916731-25917126 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
417
               

               
Alignm identity:
               
283
               

               
Alignm E-value:
               
3.00004e-41
               

               
Alignm gaps (pig, cow):
               
41, 97
               

               
Conread position:
               
329-741
               

               
Cow position:
               
chr17:31585265-31585681 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
426
               

               
Alignm identity:
               
284
               

               
Alignm E-value:
               
3.00004e-41
               

               
Alignm gaps (pig, cow):
               
48, 235
               

               
Conread position:
               
330-765
               

               
Cow position:
               
chr17:26631976-26631540 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
448
               

               
Alignm identity:
               
290
               

               
Alignm E-value:
               
5e-36
               

               
Alignm gaps (pig, cow):
               
37, 96
               

               
Conread position:
               
331-498
               

               
Cow position:
               
chr17:38613087-38613253 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
169
               

               
Alignm identity:
               
125
               

               
Alignm E-value:
               
2e-26
               

               
Alignm gaps (pig, cow):
               
125, 104
               

               
Conread position:
               
331-765
               

               
Cow position:
               
chr17:28467977-28468390 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
437
               

               
Alignm identity:
               
296
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
314, 90
               

               
Conread position:
               
332-476
               

               
Cow position:
               
chr17:20928752-20928900 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
150
               

               
Alignm identity:
               
117
               

               
Alignm E-value:
               
6e-26
               

               
Alignm gaps (pig, cow):
               
43, 94
               

               
Conread position:
               
332-584
               

               
Cow position:
               
chr17:10020957-10020700 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
259
               

               
Alignm identity:
               
185
               

               
Alignm E-value:
               
7e-38
               

               
Alignm gaps (pig, cow):
               
45, 166
               

               
Conread position:
               
332-597
               

               
Cow position:
               
chr17:14762277-14762018 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
267
               

               
Alignm identity:
               
200
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
124, 91
               

               
Conread position:
               
333-763
               

               
Cow position:
               
chr17:18146025-18146454 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
435
               

               
Alignm identity:
               
300
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
40, 55
               

               
Conread position:
               
334-727
               

               
Cow position:
               
chr17:31701281-31701663 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
400
               

               
Alignm identity:
               
266
               

               
Alignm E-value:
               
5e-36
               

               
Alignm gaps (pig, cow):
               
43, 161
               

               
Conread position:
               
334-752
               

               
Cow position:
               
chr17:11962705-11962281 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
435
               

               
Alignm identity:
               
293
               

               
Alignm E-value:
               
4.06377e-44
               

               
Alignm gaps (pig, cow):
               
122, 128
               

               
Conread position:
               
336-736
               

               
Cow position:
               
chr17:4786650-4786244 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
415
               

               
Alignm identity:
               
272
               

               
Alignm E-value:
               
2e-36
               

               
Alignm gaps (pig, cow):
               
40, 28
               

               
Conread position:
               
336-736
               

               
Cow position:
               
chr17:24559145-24559530 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
405
               

               
Alignm identity:
               
279
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
120, 41
               

               
Conread position:
               
338-637
               

               
Cow position:
               
chr17:267736-267441 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
305
               

               
Alignm identity:
               
221
               

               
Alignm E-value:
               
9.80909e-45
               

               
Alignm gaps (pig, cow):
               
75, 27
               

               
Conread position:
               
338-745
               

               
Cow position:
               
chr17:31037532-31037131 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
412
               

               
Alignm identity:
               
281
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
118, 73
               

               
Conread position:
               
339-518
               

               
Cow position:
               
chr17:10222534-10222359 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
181
               

               
Alignm identity:
               
129
               

               
Alignm E-value:
               
4e-22
               

               
Alignm gaps (pig, cow):
               
119, 85
               

               
Conread position:
               
342-563
               

               
Cow position:
               
chr17:34834368-34834143 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
228
               

               
Alignm identity:
               
156
               

               
Alignm E-value:
               
2e-24
               

               
Alignm gaps (pig, cow):
               
33, 153
               

               
Conread position:
               
343-716
               

               
Cow position:
               
chr17:6328961-6329329 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
380
               

               
Alignm identity:
               
273
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
32, 152
               

               
Conread position:
               
347-746
               

               
Cow position:
               
chr17:11832263-11831872 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
406
               

               
Alignm identity:
               
280
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
21, 76
               

               
Conread position:
               
350-765
               

               
Cow position:
               
chr17:24928339-24928744 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
418
               

               
Alignm identity:
               
274
               

               
Alignm E-value:
               
3.00004e-41
               

               
Alignm gaps (pig, cow):
               
73, 35
               

               
Conread position:
               
354-744
               

               
Cow position:
               
chr17:32280534-32280912 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
398
               

               
Alignm identity:
               
275
               

               
Alignm E-value:
               
8.99998e-41
               

               
Alignm gaps (pig, cow):
               
102, 8
               

               
Conread position:
               
354-760
               

               
Cow position:
               
chr17:25117757-25118150 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
412
               

               
Alignm identity:
               
275
               

               
Alignm E-value:
               
3e-39
               

               
Alignm gaps (pig, cow):
               
102, 36
               

               
Conread position:
               
354-761
               

               
Cow position:
               
chr17:26233961-26233567 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
411
               

               
Alignm identity:
               
275
               

               
Alignm E-value:
               
9.99967e-42
               

               
Alignm gaps (pig, cow):
               
69, 8
               

               
Conread position:
               
354-762
               

               
Cow position:
               
chr17:40673251-40673637 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
414
               

               
Alignm identity:
               
293
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
102, 8
               

               
Conread position:
               
355-739
               

               
Cow position:
               
chr17:30728382-30728747 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
393
               

               
Alignm identity:
               
265
               

               
Alignm E-value:
               
1e-32
               

               
Alignm gaps (pig, cow):
               
20, 68
               

               
Conread position:
               
355-743
               

               
Cow position:
               
chr17:5144302-5143928 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
397
               

               
Alignm identity:
               
269
               

               
Alignm E-value:
               
5e-36
               

               
Alignm gaps (pig, cow):
               
39, 69
               

               
Conread position:
               
356-727
               

               
Cow position:
               
chr17:37699491-37699113 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
385
               

               
Alignm identity:
               
258
               

               
Alignm E-value:
               
2e-38
               

               
Alignm gaps (pig, cow):
               
23, 142
               

               
Conread position:
               
357-550
               

               
Cow position:
               
chr17:11921415-11921217 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
200
               

               
Alignm identity:
               
145
               

               
Alignm E-value:
               
7e-28
               

               
Alignm gaps (pig, cow):
               
99, 65
               

               
Conread position:
               
357-598
               

               
Cow position:
               
chr17:14060909-14060669 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
244
               

               
Alignm identity:
               
186
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
99, 134
               

               
Conread position:
               
360-725
               

               
Cow position:
               
chr17:1113755-1114124 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
377
               

               
Alignm identity:
               
257
               

               
Alignm E-value:
               
3.00018e-42
               

               
Alignm gaps (pig, cow):
               
54, 136
               

               
Conread position:
               
361-735
               

               
Cow position:
               
chr17:27184069-27183706 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
379
               

               
Alignm identity:
               
260
               

               
Alignm E-value:
               
9.99967e-42
               

               
Alignm gaps (pig, cow):
               
95, 20
               

               
Conread position:
               
363-747
               

               
Cow position:
               
chr17:40393876-40394267 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
399
               

               
Alignm identity:
               
264
               

               
Alignm E-value:
               
1e-34
               

               
Alignm gaps (pig, cow):
               
12, 118
               

               
Conread position:
               
364-598
               

               
Cow position:
               
chr17:39857267-39857495 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
236
               

               
Alignm identity:
               
171
               

               
Alignm E-value:
               
2e-35
               

               
Alignm gaps (pig, cow):
               
92, 58
               

               
Conread position:
               
364-747
               

               
Cow position:
               
chr17:20884397-20884773 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
389
               

               
Alignm identity:
               
283
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
93, 57
               

               
Conread position:
               
368-597
               

               
Cow position:
               
chr17:6848683-6848898 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
232
               

               
Alignm identity:
               
167
               

               
Alignm E-value:
               
2e-26
               

               
Alignm gaps (pig, cow):
               
33, 54
               

               
Conread position:
               
368-598
               

               
Cow position:
               
chr17:33411144-33410904 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
244
               

               
Alignm identity:
               
176
               

               
Alignm E-value:
               
9e-30
               

               
Alignm gaps (pig, cow):
               
55, 157
               

               
Conread position:
               
368-740
               

               
Cow position:
               
chr17:7803293-7802931 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
374
               

               
Alignm identity:
               
258
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
104, 18
               

               
Conread position:
               
368-763
               

               
Cow position:
               
chr17:32348952-32349325 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
397
               

               
Alignm identity:
               
270
               

               
Alignm E-value:
               
3.00018e-42
               

               
Alignm gaps (pig, cow):
               
88, 54
               

               
Conread position:
               
369-550
               

               
Cow position:
               
chr17:30734413-30734237 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
182
               

               
Alignm identity:
               
136
               

               
Alignm E-value:
               
3e-29
               

               
Alignm gaps (pig, cow):
               
53, 0
               

               
Conread position:
               
369-579
               

               
Cow position:
               
chr17:27565001-27565207 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
212
               

               
Alignm identity:
               
146
               

               
Alignm E-value:
               
1e-23
               

               
Alignm gaps (pig, cow):
               
87, 55
               

               
Conread position:
               
372-707
               

               
Cow position:
               
chr17:20874272-20874613 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
348
               

               
Alignm identity:
               
243
               

               
Alignm E-value:
               
9.99967e-42
               

               
Alignm gaps (pig, cow):
               
45, 127
               

               
Conread position:
               
372-745
               

               
Cow position:
               
chr17:9056821-9056453 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
379
               

               
Alignm identity:
               
243
               

               
Alignm E-value:
               
3e-29
               

               
Alignm gaps (pig, cow):
               
18, 25
               

               
Conread position:
               
373-722
               

               
Cow position:
               
chr17:25594820-25594465 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
369
               

               
Alignm identity:
               
247
               

               
Alignm E-value:
               
6e-27
               

               
Alignm gaps (pig, cow):
               
71, 25
               

               
Conread position:
               
373-744
               

               
Cow position:
               
chr17:31856546-31856917 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
383
               

               
Alignm identity:
               
275
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
38, 127
               

               
Conread position:
               
374-632
               

               
Cow position:
               
chr17:7654568-7654317 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
262
               

               
Alignm identity:
               
186
               

               
Alignm E-value:
               
4e-34
               

               
Alignm gaps (pig, cow):
               
82, 11
               

               
Conread position:
               
376-743
               

               
Cow position:
               
chr17:25616145-25616489 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
371
               

               
Alignm identity:
               
250
               

               
Alignm E-value:
               
3e-31
               

               
Alignm gaps (pig, cow):
               
335, 45
               

               
Conread position:
               
376-759
               

               
Cow position:
               
chr17:50273-49899 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
386
               

               
Alignm identity:
               
246
               

               
Alignm E-value:
               
1e-31
               

               
Alignm gaps (pig, cow):
               
129, 58
               

               
Conread position:
               
377-598
               

               
Cow position:
               
chr17:23798169-23798386 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
224
               

               
Alignm identity:
               
171
               

               
Alignm E-value:
               
3e-40
               

               
Alignm gaps (pig, cow):
               
79, 11
               

               
Conread position:
               
377-722
               

               
Cow position:
               
chr17:11215342-11215010 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
350
               

               
Alignm identity:
               
243
               

               
Alignm E-value:
               
3e-40
               

               
Alignm gaps (pig, cow):
               
79, 62
               

               
Conread position:
               
379-593
               

               
Cow position:
               
chr17:1311237-1311448 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
217
               

               
Alignm identity:
               
153
               

               
Alignm E-value:
               
2e-27
               

               
Alignm gaps (pig, cow):
               
44, 126
               

               
Conread position:
               
380-743
               

               
Cow position:
               
chr17:25514232-25513874 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
370
               

               
Alignm identity:
               
242
               

               
Alignm E-value:
               
3e-31
               

               
Alignm gaps (pig, cow):
               
76, 12
               

               
Conread position:
               
380-760
               

               
Cow position:
               
chr17:7136872-7137270 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
409
               

               
Alignm identity:
               
277
               

               
Alignm E-value:
               
4e-33
               

               
Alignm gaps (pig, cow):
               
76, 42
               

               
Conread position:
               
381-503
               

               
Cow position:
               
chr17:9936146-9936028 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
124
               

               
Alignm identity:
               
102
               

               
Alignm E-value:
               
1e-23
               

               
Alignm gaps (pig, cow):
               
75, 41
               

               
Conread position:
               
382-539
               

               
Cow position:
               
chr17:1505202-1505359 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
161
               

               
Alignm identity:
               
122
               

               
Alignm E-value:
               
2e-24
               

               
Alignm gaps (pig, cow):
               
9, 83
               

               
Conread position:
               
382-727
               

               
Cow position:
               
chr17:26789315-26789643 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
349
               

               
Alignm identity:
               
229
               

               
Alignm E-value:
               
6e-27
               

               
Alignm gaps (pig, cow):
               
21, 72
               

               
Conread position:
               
383-550
               

               
Cow position:
               
chr17:20305941-20306107 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
169
               

               
Alignm identity:
               
122
               

               
Alignm E-value:
               
1e-23
               

               
Alignm gaps (pig, cow):
               
73, 39
               

               
Conread position:
               
383-738
               

               
Cow position:
               
chr17:1466538-1466177 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
368
               

               
Alignm identity:
               
255
               

               
Alignm E-value:
               
3.9937e-43
               

               
Alignm gaps (pig, cow):
               
40, 13
               

               
Conread position:
               
386-571
               

               
Cow position:
               
chr17:17266998-17266813 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
189
               

               
Alignm identity:
               
144
               

               
Alignm E-value:
               
4e-32
               

               
Alignm gaps (pig, cow):
               
70, 36
               

               
Conread position:
               
386-739
               

               
Cow position:
               
chr17:15340856-15340485 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
380
               

               
Alignm identity:
               
254
               

               
Alignm E-value:
               
2e-28
               

               
Alignm gaps (pig, cow):
               
106, 39
               

               
Conread position:
               
388-736
               

               
Cow position:
               
chr17:7692962-7693307 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
357
               

               
Alignm identity:
               
230
               

               
Alignm E-value:
               
2e-24
               

               
Alignm gaps (pig, cow):
               
68, 35
               

               
Conread position:
               
388-739
               

               
Cow position:
               
chr17:21325231-21325584 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
361
               

               
Alignm identity:
               
234
               

               
Alignm E-value:
               
3e-29
               

               
Alignm gaps (pig, cow):
               
68, 33
               

               
Conread position:
               
389-768
               

               
Cow position:
               
chr17:14652881-14652516 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
385
               

               
Alignm identity:
               
252
               

               
Alignm E-value:
               
9e-30
               

               
Alignm gaps (pig, cow):
               
67, 32
               

               
Conread position:
               
391-745
               

               
Cow position:
               
chr17:3353782-3354114 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
358
               

               
Alignm identity:
               
238
               

               
Alignm E-value:
               
2e-26
               

               
Alignm gaps (pig, cow):
               
65, 31
               

               
Conread position:
               
391-765
               

               
Cow position:
               
chr17:11912596-11912237 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
380
               

               
Alignm identity:
               
246
               

               
Alignm E-value:
               
2e-26
               

               
Alignm gaps (pig, cow):
               
102, 30
               

               
Conread position:
               
394-763
               

               
Cow position:
               
chr17:21743842-21744198 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
373
               

               
Alignm identity:
               
245
               

               
Alignm E-value:
               
4e-32
               

               
Alignm gaps (pig, cow):
               
62, 27
               

               
Conread position:
               
395-598
               

               
Cow position:
               
chr17:27203139-27202941 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
205
               

               
Alignm identity:
               
157
               

               
Alignm E-value:
               
6e-37
               

               
Alignm gaps (pig, cow):
               
62, 27
               

               
Conread position:
               
398-764
               

               
Cow position:
               
chr17:21489716-21489368 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
371
               

               
Alignm identity:
               
258
               

               
Alignm E-value:
               
3e-40
               

               
Alignm gaps (pig, cow):
               
58, 24
               

               
Conread position:
               
399-598
               

               
Cow position:
               
chr17:12880508-12880701 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
201
               

               
Alignm identity:
               
145
               

               
Alignm E-value:
               
7e-28
               

               
Alignm gaps (pig, cow):
               
110, 53
               

               
Conread position:
               
401-727
               

               
Cow position:
               
chr17:10432065-10431736 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
339
               

               
Alignm identity:
               
233
               

               
Alignm E-value:
               
2e-35
               

               
Alignm gaps (pig, cow):
               
55, 20
               

               
Conread position:
               
402-741
               

               
Cow position:
               
chr17:25342828-25342498 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
344
               

               
Alignm identity:
               
235
               

               
Alignm E-value:
               
7e-38
               

               
Alignm gaps (pig, cow):
               
54, 22
               

               
Conread position:
               
407-752
               

               
Cow position:
               
chr17:29025983-29026328 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
353
               

               
Alignm identity:
               
232
               

               
Alignm E-value:
               
1e-33
               

               
Alignm gaps (pig, cow):
               
49, 89
               

               
Conread position:
               
407-768
               

               
Cow position:
               
chr17:22057107-22056749 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
373
               

               
Alignm identity:
               
249
               

               
Alignm E-value:
               
3e-31
               

               
Alignm gaps (pig, cow):
               
49, 59
               

               
Conread position:
               
409-750
               

               
Cow position:
               
chr17:16616736-16617052 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
343
               

               
Alignm identity:
               
231
               

               
Alignm E-value:
               
7e-28
               

               
Alignm gaps (pig, cow):
               
327, 54
               

               
Conread position:
               
412-754
               

               
Cow position:
               
chr17:8598185-8597854 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
345
               

               
Alignm identity:
               
231
               

               
Alignm E-value:
               
1e-34
               

               
Alignm gaps (pig, cow):
               
44, 80
               

               
Conread position:
               
414-744
               

               
Cow position:
               
chr17:39715081-39715431 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
354
               

               
Alignm identity:
               
242
               

               
Alignm E-value:
               
5e-36
               

               
Alignm gaps (pig, cow):
               
42, 16
               

               
Conread position:
               
414-757
               

               
Cow position:
               
chr17:2275397-2275721 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
347
               

               
Alignm identity:
               
238
               

               
Alignm E-value:
               
1e-33
               

               
Alignm gaps (pig, cow):
               
46, 81
               

               
Conread position:
               
415-742
               

               
Cow position:
               
chr17:17193417-17193733 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
332
               

               
Alignm identity:
               
237
               

               
Alignm E-value:
               
3.00018e-42
               

               
Alignm gaps (pig, cow):
               
67, 79
               

               
Conread position:
               
415-771
               

               
Cow position:
               
chr17:1469300-1469637 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
360
               

               
Alignm identity:
               
260
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
41, 27
               

               
Conread position:
               
417-598
               

               
Cow position:
               
chr17:21922696-21922529 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
182
               

               
Alignm identity:
               
138
               

               
Alignm E-value:
               
2e-25
               

               
Alignm gaps (pig, cow):
               
39, 0
               

               
Conread position:
               
418-765
               

               
Cow position:
               
chr17:27730466-27730812 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
353
               

               
Alignm identity:
               
235
               

               
Alignm E-value:
               
2e-37
               

               
Alignm gaps (pig, cow):
               
38, 47
               

               
Conread position:
               
422-742
               

               
Cow position:
               
chr17:21806519-21806206 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
324
               

               
Alignm identity:
               
223
               

               
Alignm E-value:
               
8e-39
               

               
Alignm gaps (pig, cow):
               
211, 36
               

               
Conread position:
               
422-761
               

               
Cow position:
               
chr17:9824599-9824929 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
343
               

               
Alignm identity:
               
227
               

               
Alignm E-value:
               
1e-30
               

               
Alignm gaps (pig, cow):
               
35, 94
               

               
Conread position:
               
426-761
               

               
Cow position:
               
chr17:3153637-3153304 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
346
               

               
Alignm identity:
               
231
               

               
Alignm E-value:
               
2e-27
               

               
Alignm gaps (pig, cow):
               
30, 56
               

               
Conread position:
               
432-763
               

               
Cow position:
               
chr17:37816248-37815928 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
337
               

               
Alignm identity:
               
221
               

               
Alignm E-value:
               
5e-25
               

               
Alignm gaps (pig, cow):
               
24, 13
               

               
Conread position:
               
433-754
               

               
Cow position:
               
chr17:5372588-5372276 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
325
               

               
Alignm identity:
               
211
               

               
Alignm E-value:
               
5e-25
               

               
Alignm gaps (pig, cow):
               
23, 61
               

               
Conread position:
               
435-598
               

               
Cow position:
               
chr17:16158434-16158596 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
165
               

               
Alignm identity:
               
123
               

               
Alignm E-value:
               
2e-26
               

               
Alignm gaps (pig, cow):
               
21, 56
               

               
Conread position:
               
435-747
               

               
Cow position:
               
chr17:7590514-7590208 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
318
               

               
Alignm identity:
               
211
               

               
Alignm E-value:
               
7e-28
               

               
Alignm gaps (pig, cow):
               
165, 21
               

               
Conread position:
               
435-756
               

               
Cow position:
               
chr17:9770454-9770760 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
327
               

               
Alignm identity:
               
234
               

               
Alignm E-value:
               
7e-38
               

               
Alignm gaps (pig, cow):
               
21, 59
               

               
Conread position:
               
442-598
               

               
Cow position:
               
chr17:22245942-22246094 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
158
               

               
Alignm identity:
               
116
               

               
Alignm E-value:
               
3e-21
               

               
Alignm gaps (pig, cow):
               
14, 48
               

               
Conread position:
               
442-746
               

               
Cow position:
               
chr17:22051642-22051344 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
308
               

               
Alignm identity:
               
205
               

               
Alignm E-value:
               
3e-29
               

               
Alignm gaps (pig, cow):
               
14, 77
               

               
Conread position:
               
445-747
               

               
Cow position:
               
chr17:25126305-25126592 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
304
               

               
Alignm identity:
               
212
               

               
Alignm E-value:
               
5e-35
               

               
Alignm gaps (pig, cow):
               
11, 49
               

               
Conread position:
               
445-759
               

               
Cow position:
               
chr17:35149574-35149267 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
321
               

               
Alignm identity:
               
218
               

               
Alignm E-value:
               
3e-31
               

               
Alignm gaps (pig, cow):
               
194, 48
               

               
Conread position:
               
445-765
               

               
Cow position:
               
chr17:5011802-5012107 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
325
               

               
Alignm identity:
               
222
               

               
Alignm E-value:
               
3e-30
               

               
Alignm gaps (pig, cow):
               
11, 49
               

               
Conread position:
               
446-746
               

               
Cow position:
               
chr17:26802984-26802680 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
313
               

               
Alignm identity:
               
204
               

               
Alignm E-value:
               
3e-21
               

               
Alignm gaps (pig, cow):
               
10, 22
               

               
Conread position:
               
449-757
               

               
Cow position:
               
chr17:25800925-25800624 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
314
               

               
Alignm identity:
               
205
               

               
Alignm E-value:
               
1e-23
               

               
Alignm gaps (pig, cow):
               
8, 49
               

               
Conread position:
               
453-764
               

               
Cow position:
               
chr17:25885784-25886097 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
321
               

               
Alignm identity:
               
217
               

               
Alignm E-value:
               
4e-33
               

               
Alignm gaps (pig, cow):
               
37, 8
               

               
Conread position:
               
455-743
               

               
Cow position:
               
chr17:17044369-17044090 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
290
               

               
Alignm identity:
               
187
               

               
Alignm E-value:
               
4e-22
               

               
Alignm gaps (pig, cow):
               
280, 38
               

               
Conread position:
               
456-745
               

               
Cow position:
               
chr17:26448508-26448789 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
292
               

               
Alignm identity:
               
201
               

               
Alignm E-value:
               
4e-33
               

               
Alignm gaps (pig, cow):
               
22, 39
               

               
Conread position:
               
457-736
               

               
Cow position:
               
chr17:18818534-18818799 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
282
               

               
Alignm identity:
               
188
               

               
Alignm E-value:
               
3e-21
               

               
Alignm gaps (pig, cow):
               
53, 34
               

               
Conread position:
               
457-760
               

               
Cow position:
               
chr17:28814533-28814208 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
332
               

               
Alignm identity:
               
224
               

               
Alignm E-value:
               
4e-23
               

               
Alignm gaps (pig, cow):
               
45, 32
               

               
Conread position:
               
461-749
               

               
Cow position:
               
chr17:22189408-22189680 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
289
               

               
Alignm identity:
               
189
               

               
Alignm E-value:
               
3e-21
               

               
Alignm gaps (pig, cow):
               
36, 0
               

               
Conread position:
               
469-747
               

               
Cow position:
               
chr17:40384226-40383958 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
281
               

               
Alignm identity:
               
186
               

               
Alignm E-value:
               
1e-22
               

               
Alignm gaps (pig, cow):
               
124, 24
               

               
Conread position:
               
469-750
               

               
Cow position:
               
chr17:25584217-25584495 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
288
               

               
Alignm identity:
               
195
               

               
Alignm E-value:
               
6e-27
               

               
Alignm gaps (pig, cow):
               
40, 24
               

               
Conread position:
               
470-745
               

               
Cow position:
               
chr17:25473301-25473035 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
277
               

               
Alignm identity:
               
186
               

               
Alignm E-value:
               
6e-27
               

               
Alignm gaps (pig, cow):
               
186, 31
               

               
Conread position:
               
481-722
               

               
Cow position:
               
chr17:5013087-5012845 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
248
               

               
Alignm identity:
               
171
               

               
Alignm E-value:
               
6e-26
               

               
Alignm gaps (pig, cow):
               
26, 12
               

               
Conread position:
               
481-746
               

               
Cow position:
               
chr17:37341051-37340785 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
269
               

               
Alignm identity:
               
181
               

               
Alignm E-value:
               
3e-30
               

               
Alignm gaps (pig, cow):
               
19, 156
               

               
Conread position:
               
483-745
               

               
Cow position:
               
chr17:25511234-25511487 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
266
               

               
Alignm identity:
               
181
               

               
Alignm E-value:
               
2e-24
               

               
Alignm gaps (pig, cow):
               
9, 30
               

               
Conread position:
               
488-770
               

               
Cow position:
               
chr17:9510001-9509726 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
288
               

               
Alignm identity:
               
193
               

               
Alignm E-value:
               
2e-24
               

               
Alignm gaps (pig, cow):
               
9, 57
               

               
Conread position:
               
491-747
               

               
Cow position:
               
chr17:21466266-21466010 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
262
               

               
Alignm identity:
               
172
               

               
Alignm E-value:
               
4e-22
               

               
Alignm gaps (pig, cow):
               
5, 114
               

               
Conread position:
               
492-742
               

               
Cow position:
               
chr17:24841695-24841940 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
254
               

               
Alignm identity:
               
169
               

               
Alignm E-value:
               
3e-21
               

               
Alignm gaps (pig, cow):
               
133, 18
               

               
Conread position:
               
493-752
               

               
Cow position:
               
chr17:20834180-20834435 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
262
               

               
Alignm identity:
               
172
               

               
Alignm E-value:
               
1e-22
               

               
Alignm gaps (pig, cow):
               
107, 139
               

               
Conread position:
               
494-739
               

               
Cow position:
               
chr17:15354934-15355174 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
249
               

               
Alignm identity:
               
172
               

               
Alignm E-value:
               
2e-26
               

               
Alignm gaps (pig, cow):
               
131, 9
               

               
Conread position:
               
504-768
               

               
Cow position:
               
chr17:20929252-20929512 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
265
               

               
Alignm identity:
               
179
               

               
Alignm E-value:
               
1e-31
               

               
Alignm gaps (pig, cow):
               
98, 0
               

               
Conread position:
               
505-749
               

               
Cow position:
               
chr17:40355270-40355510 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
249
               

               
Alignm identity:
               
174
               

               
Alignm E-value:
               
2e-28
               

               
Alignm gaps (pig, cow):
               
95, 120
               

               
Conread position:
               
506-760
               

               
Cow position:
               
chr17:26072748-26072500 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
259
               

               
Alignm identity:
               
177
               

               
Alignm E-value:
               
2e-25
               

               
Alignm gaps (pig, cow):
               
94, 118
               

               
Conread position:
               
507-739
               

               
Cow position:
               
chr17:4817542-4817770 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
238
               

               
Alignm identity:
               
165
               

               
Alignm E-value:
               
1e-22
               

               
Alignm gaps (pig, cow):
               
93, 66
               

               
Conread position:
               
508-762
               

               
Cow position:
               
chr17:21718981-21718732 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
257
               

               
Alignm identity:
               
172
               

               
Alignm E-value:
               
2e-25
               

               
Alignm gaps (pig, cow):
               
237, 22
               

               
Conread position:
               
509-746
               

               
Cow position:
               
chr17:1463314-1463081 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
242
               

               
Alignm identity:
               
164
               

               
Alignm E-value:
               
1e-22
               

               
Alignm gaps (pig, cow):
               
91, 14
               

               
Conread position:
               
513-744
               

               
Cow position:
               
chr17:22074478-22074234 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
247
               

               
Alignm identity:
               
173
               

               
Alignm E-value:
               
5e-25
               

               
Alignm gaps (pig, cow):
               
87, 190
               

               
Conread position:
               
514-765
               

               
Cow position:
               
chr17:18674008-18673769 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
254
               

               
Alignm identity:
               
174
               

               
Alignm E-value:
               
1e-22
               

               
Alignm gaps (pig, cow):
               
229, 31
               

               
Conread position:
               
523-742
               

               
Cow position:
               
chr17:15702386-15702622 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
238
               

               
Alignm identity:
               
166
               

               
Alignm E-value:
               
1e-21
               

               
Alignm gaps (pig, cow):
               
77, 58
               

               
Conread position:
               
531-745
               

               
Cow position:
               
chr17:25139301-25139521 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
222
               

               
Alignm identity:
               
160
               

               
Alignm E-value:
               
9e-30
               

               
Alignm gaps (pig, cow):
               
69, 90
               

               
Conread position:
               
532-745
               

               
Cow position:
               
chr17:3364628-3364835 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
216
               

               
Alignm identity:
               
152
               

               
Alignm E-value:
               
2e-24
               

               
Alignm gaps (pig, cow):
               
25, 45
               

               
Conread position:
               
536-741
               

               
Cow position:
               
chr17:19898933-19899142 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
212
               

               
Alignm identity:
               
152
               

               
Alignm E-value:
               
7e-28
               

               
Alignm gaps (pig, cow):
               
45, 114
               

               
Conread position:
               
537-740
               

               
Cow position:
               
chr17:39963921-39964119 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
207
               

               
Alignm identity:
               
147
               

               
Alignm E-value:
               
5e-24
               

               
Alignm gaps (pig, cow):
               
94, 65
               

               
Conread position:
               
537-761
               

               
Cow position:
               
chr17:15883715-15883941 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
233
               

               
Alignm identity:
               
163
               

               
Alignm E-value:
               
1e-23
               

               
Alignm gaps (pig, cow):
               
63, 87
               

               
Conread position:
               
542-759
               

               
Cow position:
               
chr17:9078172-9077951 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
224
               

               
Alignm identity:
               
152
               

               
Alignm E-value:
               
1e-22
               

               
Alignm gaps (pig, cow):
               
57, 87
               

               
Conread position:
               
544-764
               

               
Cow position:
               
chr17:6786987-6787205 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
224
               

               
Alignm identity:
               
158
               

               
Alignm E-value:
               
6e-27
               

               
Alignm gaps (pig, cow):
               
56, 87
               

               
Conread position:
               
546-759
               

               
Cow position:
               
chr17:11921112-11920903 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
217
               

               
Alignm identity:
               
156
               

               
Alignm E-value:
               
7e-28
               

               
Alignm gaps (pig, cow):
               
54, 80
               

               
Conread position:
               
551-748
               

               
Cow position:
               
chr17:43323487-43323293 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
198
               

               
Alignm identity:
               
135
               

               
Alignm E-value:
               
4e-22
               

               
Alignm gaps (pig, cow):
               
51, 0
               

               
Conread position:
               
554-764
               

               
Cow position:
               
chr17:3387778-3387984 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
213
               

               
Alignm identity:
               
154
               

               
Alignm E-value:
               
9e-30
               

               
Alignm gaps (pig, cow):
               
84, 48
               

               
Conread position:
               
557-747
               

               
Cow position:
               
chr17:21298507-21298713 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
207
               

               
Alignm identity:
               
154
               

               
Alignm E-value:
               
6e-26
               

               
Alignm gaps (pig, cow):
               
43, 0
               

               
Conread position:
               
557-765
               

               
Cow position:
               
chr17:21236586-21236791 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
212
               

               
Alignm identity:
               
152
               

               
Alignm E-value:
               
2e-27
               

               
Alignm gaps (pig, cow):
               
47, 83
               

               
Conread position:
               
558-749
               

               
Cow position:
               
chr17:25490996-25490793 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
205
               

               
Alignm identity:
               
147
               

               
Alignm E-value:
               
4e-23
               

               
Alignm gaps (pig, cow):
               
42, 192
               

               
Conread position:
               
563-747
               

               
Cow position:
               
chr17:12200863-12201040 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
186
               

               
Alignm identity:
               
136
               

               
Alignm E-value:
               
1e-23
               

               
Alignm gaps (pig, cow):
               
132, 49
               

               
Conread position:
               
598-757
               

               
Cow position:
               
chr17:25193402-25193237 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
166
               

               
Alignm identity:
               
120
               

               
Alignm E-value:
               
1e-21
               

               
Alignm gaps (pig, cow):
               
35, 0
               

               
Conread position:
               
610-747
               

               
Cow position:
               
chr17:9713205-9713073 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
138
               

               
Alignm identity:
               
106
               

               
Alignm E-value:
               
1e-22
               

               
Alignm gaps (pig, cow):
               
48, 0
               

               
Conread position:
               
614-765
               

               
Cow position:
               
chr17:7659480-7659331 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
152
               

               
Alignm identity:
               
110
               

               
Alignm E-value:
               
3e-21
               

               
Alignm gaps (pig, cow):
               
44, 0
               

               
Conread position:
               
616-767
               

               
Cow position:
               
chr17:24766804-24766654 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
154
               

               
Alignm identity:
               
114
               

               
Alignm E-value:
               
1e-21
               

               
Alignm gaps (pig, cow):
               
15, 44
               

               
Conread position:
               
657-765
               

               
Cow position:
               
chr17:38587919-38587810 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
110
               

               
Alignm identity:
               
89
               

               
Alignm E-value:
               
4e-22
               

               
Alignm gaps (pig, cow):
               
93, 0
               
Show alignments to all cow chromosomes.