Cow genome map

Conread name: Utr1-UTR01D050106

Conread position: 1-444
Cow position: chr20:23849820-23850238 (view UCSC Genome Browser custom track)
Alignm length: 444
Alignm identity: 325
Alignm E-value: 0
Alignm gaps (pig, cow): 77, 0

Conread position: 1-485
Cow position: chr20:11614522-11614046 (view UCSC Genome Browser custom track)
Alignm length: 492
Alignm identity: 382
Alignm E-value: 0
Alignm gaps (pig, cow): 9, 179

Conread position: 1-499
Cow position: chr20:23679630-23679138 (view UCSC Genome Browser custom track)
Alignm length: 507
Alignm identity: 377
Alignm E-value: 0
Alignm gaps (pig, cow): 133, 70

Conread position: 1-501
Cow position: chr20:18185097-18185578 (view UCSC Genome Browser custom track)
Alignm length: 508
Alignm identity: 384
Alignm E-value: 0
Alignm gaps (pig, cow): 130, 19

Conread position: 1-526
Cow position: chr20:8910428-8910955 (view UCSC Genome Browser custom track)
Alignm length: 544
Alignm identity: 398
Alignm E-value: 0
Alignm gaps (pig, cow): 255, 99

Conread position: 1-598
Cow position: chr20:12442174-12441590 (view UCSC Genome Browser custom track)
Alignm length: 610
Alignm identity: 433
Alignm E-value: 0
Alignm gaps (pig, cow): 138, 193

Conread position: 1-604
Cow position: chr20:22313634-22313046 (view UCSC Genome Browser custom track)
Alignm length: 607
Alignm identity: 429
Alignm E-value: 0
Alignm gaps (pig, cow): 281, 144

Conread position: 1-634
Cow position: chr20:9474090-9473468 (view UCSC Genome Browser custom track)
Alignm length: 641
Alignm identity: 493
Alignm E-value: 0
Alignm gaps (pig, cow): 417, 12

Conread position: 1-654
Cow position: chr20:30817058-30817697 (view UCSC Genome Browser custom track)
Alignm length: 663
Alignm identity: 493
Alignm E-value: 0
Alignm gaps (pig, cow): 264, 180

Conread position: 1-720
Cow position: chr20:6423496-6424177 (view UCSC Genome Browser custom track)
Alignm length: 732
Alignm identity: 500
Alignm E-value: 0
Alignm gaps (pig, cow): 413, 88

Conread position: 1-725
Cow position: chr20:24399103-24398415 (view UCSC Genome Browser custom track)
Alignm length: 730
Alignm identity: 502
Alignm E-value: 0
Alignm gaps (pig, cow): 424, 63

Conread position: 1-730
Cow position: chr20:4621814-4621108 (view UCSC Genome Browser custom track)
Alignm length: 736
Alignm identity: 523
Alignm E-value: 0
Alignm gaps (pig, cow): 146, 95

Conread position: 1-740
Cow position: chr20:746477-747175 (view UCSC Genome Browser custom track)
Alignm length: 747
Alignm identity: 478
Alignm E-value: 0
Alignm gaps (pig, cow): 85, 185

Conread position: 1-742
Cow position: chr20:8577770-8578500 (view UCSC Genome Browser custom track)
Alignm length: 753
Alignm identity: 514
Alignm E-value: 0
Alignm gaps (pig, cow): 373, 167

Conread position: 1-742
Cow position: chr20:35145529-35146258 (view UCSC Genome Browser custom track)
Alignm length: 755
Alignm identity: 551
Alignm E-value: 0
Alignm gaps (pig, cow): 104, 99

Conread position: 1-743
Cow position: chr20:3599876-3599156 (view UCSC Genome Browser custom track)
Alignm length: 752
Alignm identity: 535
Alignm E-value: 0
Alignm gaps (pig, cow): 84, 174

Conread position: 1-754
Cow position: chr20:4945722-4944993 (view UCSC Genome Browser custom track)
Alignm length: 760
Alignm identity: 566
Alignm E-value: 0
Alignm gaps (pig, cow): 235, 52

Conread position: 2-489
Cow position: chr20:17734252-17733774 (view UCSC Genome Browser custom track)
Alignm length: 498
Alignm identity: 370
Alignm E-value: 0
Alignm gaps (pig, cow): 138, 69

Conread position: 2-748
Cow position: chr20:12996492-12995742 (view UCSC Genome Browser custom track)
Alignm length: 766
Alignm identity: 573
Alignm E-value: 0
Alignm gaps (pig, cow): 15, 188

Conread position: 2-759
Cow position: chr20:9536663-9537430 (view UCSC Genome Browser custom track)
Alignm length: 785
Alignm identity: 582
Alignm E-value: 0
Alignm gaps (pig, cow): 37, 62

Conread position: 5-511
Cow position: chr20:10235377-10235872 (view UCSC Genome Browser custom track)
Alignm length: 513
Alignm identity: 381
Alignm E-value: 0
Alignm gaps (pig, cow): 8, 180

Conread position: 5-515
Cow position: chr20:21324633-21325140 (view UCSC Genome Browser custom track)
Alignm length: 529
Alignm identity: 389
Alignm E-value: 0
Alignm gaps (pig, cow): 134, 186

Conread position: 5-521
Cow position: chr20:19410837-19410331 (view UCSC Genome Browser custom track)
Alignm length: 524
Alignm identity: 380
Alignm E-value: 0
Alignm gaps (pig, cow): 351, 83

Conread position: 5-534
Cow position: chr20:24391528-24392022 (view UCSC Genome Browser custom track)
Alignm length: 541
Alignm identity: 385
Alignm E-value: 0
Alignm gaps (pig, cow): 129, 73

Conread position: 5-573
Cow position: chr20:19146395-19146959 (view UCSC Genome Browser custom track)
Alignm length: 578
Alignm identity: 419
Alignm E-value: 0
Alignm gaps (pig, cow): 103, 90

Conread position: 5-645
Cow position: chr20:13877183-13876537 (view UCSC Genome Browser custom track)
Alignm length: 657
Alignm identity: 481
Alignm E-value: 0
Alignm gaps (pig, cow): 370, 179

Conread position: 5-719
Cow position: chr20:8429277-8429961 (view UCSC Genome Browser custom track)
Alignm length: 724
Alignm identity: 521
Alignm E-value: 0
Alignm gaps (pig, cow): 370, 179

Conread position: 5-727
Cow position: chr20:7807036-7806336 (view UCSC Genome Browser custom track)
Alignm length: 729
Alignm identity: 535
Alignm E-value: 0
Alignm gaps (pig, cow): 370, 178

Conread position: 5-745
Cow position: chr20:4756296-4755586 (view UCSC Genome Browser custom track)
Alignm length: 748
Alignm identity: 534
Alignm E-value: 0
Alignm gaps (pig, cow): 370, 176

Conread position: 5-752
Cow position: chr20:29844566-29845309 (view UCSC Genome Browser custom track)
Alignm length: 763
Alignm identity: 548
Alignm E-value: 0
Alignm gaps (pig, cow): 32, 76

Conread position: 5-752
Cow position: chr20:39418353-39417648 (view UCSC Genome Browser custom track)
Alignm length: 751
Alignm identity: 523
Alignm E-value: 0
Alignm gaps (pig, cow): 451, 9

Conread position: 5-758
Cow position: chr20:14806415-14807147 (view UCSC Genome Browser custom track)
Alignm length: 758
Alignm identity: 530
Alignm E-value: 0
Alignm gaps (pig, cow): 451, 11

Conread position: 5-760
Cow position: chr20:20353388-20352647 (view UCSC Genome Browser custom track)
Alignm length: 761
Alignm identity: 540
Alignm E-value: 0
Alignm gaps (pig, cow): 419, 183

Conread position: 5-761
Cow position: chr20:23871294-23870533 (view UCSC Genome Browser custom track)
Alignm length: 784
Alignm identity: 541
Alignm E-value: 0
Alignm gaps (pig, cow): 129, 194

Conread position: 7-598
Cow position: chr20:40781507-40782068 (view UCSC Genome Browser custom track)
Alignm length: 594
Alignm identity: 406
Alignm E-value: 0
Alignm gaps (pig, cow): 325, 69

Conread position: 7-742
Cow position: chr20:581394-580652 (view UCSC Genome Browser custom track)
Alignm length: 762
Alignm identity: 535
Alignm E-value: 0
Alignm gaps (pig, cow): 15, 133

Conread position: 13-604
Cow position: chr20:11453826-11453245 (view UCSC Genome Browser custom track)
Alignm length: 599
Alignm identity: 415
Alignm E-value: 0
Alignm gaps (pig, cow): 96, 181

Conread position: 17-598
Cow position: chr20:9014810-9014240 (view UCSC Genome Browser custom track)
Alignm length: 588
Alignm identity: 444
Alignm E-value: 0
Alignm gaps (pig, cow): 358, 171

Conread position: 17-766
Cow position: chr20:40423554-40422831 (view UCSC Genome Browser custom track)
Alignm length: 760
Alignm identity: 542
Alignm E-value: 0
Alignm gaps (pig, cow): 120, 59

Conread position: 19-574
Cow position: chr20:40256538-40257053 (view UCSC Genome Browser custom track)
Alignm length: 558
Alignm identity: 391
Alignm E-value: 0
Alignm gaps (pig, cow): 404, 75

Conread position: 38-744
Cow position: chr20:9267568-9266853 (view UCSC Genome Browser custom track)
Alignm length: 738
Alignm identity: 491
Alignm E-value: 0
Alignm gaps (pig, cow): 99, 152

Conread position: 39-598
Cow position: chr20:33363075-33363625 (view UCSC Genome Browser custom track)
Alignm length: 564
Alignm identity: 392
Alignm E-value: 0
Alignm gaps (pig, cow): 230, 82

Conread position: 42-550
Cow position: chr20:6848170-6848690 (view UCSC Genome Browser custom track)
Alignm length: 528
Alignm identity: 356
Alignm E-value: 0
Alignm gaps (pig, cow): 143, 73

Conread position: 43-598
Cow position: chr20:21371858-21372415 (view UCSC Genome Browser custom track)
Alignm length: 579
Alignm identity: 401
Alignm E-value: 0
Alignm gaps (pig, cow): 91, 148

Conread position: 47-657
Cow position: chr20:13652795-13652195 (view UCSC Genome Browser custom track)
Alignm length: 626
Alignm identity: 424
Alignm E-value: 0
Alignm gaps (pig, cow): 210, 134

Conread position: 48-598
Cow position: chr20:16714973-16715499 (view UCSC Genome Browser custom track)
Alignm length: 552
Alignm identity: 397
Alignm E-value: 0
Alignm gaps (pig, cow): 510, 140

Conread position: 64-765
Cow position: chr20:36780150-36779450 (view UCSC Genome Browser custom track)
Alignm length: 720
Alignm identity: 520
Alignm E-value: 0
Alignm gaps (pig, cow): 70, 110

Conread position: 65-632
Cow position: chr20:34001803-34001247 (view UCSC Genome Browser custom track)
Alignm length: 578
Alignm identity: 429
Alignm E-value: 0
Alignm gaps (pig, cow): 346, 119

Conread position: 68-499
Cow position: chr20:12047997-12048403 (view UCSC Genome Browser custom track)
Alignm length: 432
Alignm identity: 321
Alignm E-value: 0
Alignm gaps (pig, cow): 120, 0

Conread position: 71-747
Cow position: chr20:31927866-31927217 (view UCSC Genome Browser custom track)
Alignm length: 687
Alignm identity: 475
Alignm E-value: 0
Alignm gaps (pig, cow): 305, 117

Conread position: 85-561
Cow position: chr20:18100025-18100478 (view UCSC Genome Browser custom track)
Alignm length: 482
Alignm identity: 352
Alignm E-value: 0
Alignm gaps (pig, cow): 290, 94

Conread position: 93-745
Cow position: chr20:28604829-28605454 (view UCSC Genome Browser custom track)
Alignm length: 660
Alignm identity: 440
Alignm E-value: 0
Alignm gaps (pig, cow): 363, 94

Conread position: 94-511
Cow position: chr20:33176815-33177211 (view UCSC Genome Browser custom track)
Alignm length: 428
Alignm identity: 315
Alignm E-value: 0
Alignm gaps (pig, cow): 281, 94

Conread position: 111-739
Cow position: chr20:33531942-33532532 (view UCSC Genome Browser custom track)
Alignm length: 632
Alignm identity: 444
Alignm E-value: 0
Alignm gaps (pig, cow): 163, 68

Conread position: 112-678
Cow position: chr20:33170238-33169664 (view UCSC Genome Browser custom track)
Alignm length: 590
Alignm identity: 425
Alignm E-value: 0
Alignm gaps (pig, cow): 295, 76

Conread position: 114-764
Cow position: chr20:20966992-20967581 (view UCSC Genome Browser custom track)
Alignm length: 653
Alignm identity: 454
Alignm E-value: 0
Alignm gaps (pig, cow): 398, 74

Conread position: 118-760
Cow position: chr20:28982341-28982958 (view UCSC Genome Browser custom track)
Alignm length: 648
Alignm identity: 425
Alignm E-value: 0
Alignm gaps (pig, cow): 249, 74

Conread position: 122-598
Cow position: chr20:39415398-39415857 (view UCSC Genome Browser custom track)
Alignm length: 486
Alignm identity: 330
Alignm E-value: 0
Alignm gaps (pig, cow): 253, 59

Conread position: 130-503
Cow position: chr20:12334033-12334389 (view UCSC Genome Browser custom track)
Alignm length: 377
Alignm identity: 287
Alignm E-value: 0
Alignm gaps (pig, cow): 12, 55

Conread position: 133-598
Cow position: chr20:19750966-19751414 (view UCSC Genome Browser custom track)
Alignm length: 467
Alignm identity: 336
Alignm E-value: 0
Alignm gaps (pig, cow): 323, 51

Conread position: 141-736
Cow position: chr20:24069477-24070041 (view UCSC Genome Browser custom track)
Alignm length: 597
Alignm identity: 411
Alignm E-value: 0
Alignm gaps (pig, cow): 315, 43

Conread position: 148-520
Cow position: chr20:15577222-15576857 (view UCSC Genome Browser custom track)
Alignm length: 379
Alignm identity: 271
Alignm E-value: 0
Alignm gaps (pig, cow): 196, 33

Conread position: 148-767
Cow position: chr20:31740543-31739949 (view UCSC Genome Browser custom track)
Alignm length: 624
Alignm identity: 416
Alignm E-value: 0
Alignm gaps (pig, cow): 307, 33

Conread position: 152-767
Cow position: chr20:18392566-18391987 (view UCSC Genome Browser custom track)
Alignm length: 626
Alignm identity: 427
Alignm E-value: 0
Alignm gaps (pig, cow): 306, 36

Conread position: 155-764
Cow position: chr20:19328079-19328665 (view UCSC Genome Browser custom track)
Alignm length: 619
Alignm identity: 441
Alignm E-value: 0
Alignm gaps (pig, cow): 249, 13

Conread position: 156-747
Cow position: chr20:19236768-19237321 (view UCSC Genome Browser custom track)
Alignm length: 594
Alignm identity: 412
Alignm E-value: 0
Alignm gaps (pig, cow): 300, 28

Conread position: 160-595
Cow position: chr20:33144872-33144449 (view UCSC Genome Browser custom track)
Alignm length: 438
Alignm identity: 315
Alignm E-value: 0
Alignm gaps (pig, cow): 264, 24

Conread position: 160-759
Cow position: chr20:17251392-17251981 (view UCSC Genome Browser custom track)
Alignm length: 613
Alignm identity: 461
Alignm E-value: 0
Alignm gaps (pig, cow): 215, 24

Conread position: 160-760
Cow position: chr20:6054822-6054244 (view UCSC Genome Browser custom track)
Alignm length: 611
Alignm identity: 449
Alignm E-value: 0
Alignm gaps (pig, cow): 264, 18

Conread position: 177-550
Cow position: chr20:24002024-24002375 (view UCSC Genome Browser custom track)
Alignm length: 379
Alignm identity: 282
Alignm E-value: 0
Alignm gaps (pig, cow): 9, 29

Conread position: 182-479
Cow position: chr20:16291180-16291462 (view UCSC Genome Browser custom track)
Alignm length: 301
Alignm identity: 233
Alignm E-value: 0
Alignm gaps (pig, cow): 197, 23

Conread position: 198-744
Cow position: chr20:12582234-12581709 (view UCSC Genome Browser custom track)
Alignm length: 549
Alignm identity: 386
Alignm E-value: 0
Alignm gaps (pig, cow): 17, 76

Conread position: 202-588
Cow position: chr20:10884648-10884260 (view UCSC Genome Browser custom track)
Alignm length: 395
Alignm identity: 287
Alignm E-value: 0
Alignm gaps (pig, cow): 164, 69

Conread position: 202-598
Cow position: chr20:35797324-35797716 (view UCSC Genome Browser custom track)
Alignm length: 404
Alignm identity: 307
Alignm E-value: 0
Alignm gaps (pig, cow): 172, 61

Conread position: 202-674
Cow position: chr20:39728169-39728641 (view UCSC Genome Browser custom track)
Alignm length: 482
Alignm identity: 352
Alignm E-value: 0
Alignm gaps (pig, cow): 254, 59

Conread position: 202-740
Cow position: chr20:33435444-33434916 (view UCSC Genome Browser custom track)
Alignm length: 552
Alignm identity: 401
Alignm E-value: 0
Alignm gaps (pig, cow): 128, 50

Conread position: 202-744
Cow position: chr20:6240811-6240273 (view UCSC Genome Browser custom track)
Alignm length: 553
Alignm identity: 390
Alignm E-value: 0
Alignm gaps (pig, cow): 165, 63

Conread position: 202-747
Cow position: chr20:21345120-21345689 (view UCSC Genome Browser custom track)
Alignm length: 580
Alignm identity: 414
Alignm E-value: 0
Alignm gaps (pig, cow): 49, 75

Conread position: 202-748
Cow position: chr20:39398198-39398733 (view UCSC Genome Browser custom track)
Alignm length: 555
Alignm identity: 367
Alignm E-value: 0
Alignm gaps (pig, cow): 63, 107

Conread position: 202-765
Cow position: chr20:7426471-7425930 (view UCSC Genome Browser custom track)
Alignm length: 566
Alignm identity: 383
Alignm E-value: 0
Alignm gaps (pig, cow): 175, 12

Conread position: 208-598
Cow position: chr20:42469491-42469866 (view UCSC Genome Browser custom track)
Alignm length: 394
Alignm identity: 287
Alignm E-value: 0
Alignm gaps (pig, cow): 246, 47

Conread position: 209-766
Cow position: chr20:21714477-21715063 (view UCSC Genome Browser custom track)
Alignm length: 593
Alignm identity: 416
Alignm E-value: 0
Alignm gaps (pig, cow): 203, 49

Conread position: 210-463
Cow position: chr20:36997442-36997690 (view UCSC Genome Browser custom track)
Alignm length: 260
Alignm identity: 195
Alignm E-value: 8e-40
Alignm gaps (pig, cow): 28, 43

Conread position: 210-559
Cow position: chr20:15761221-15760881 (view UCSC Genome Browser custom track)
Alignm length: 353
Alignm identity: 263
Alignm E-value: 0
Alignm gaps (pig, cow): 166, 52

Conread position: 213-588
Cow position: chr20:35958378-35958745 (view UCSC Genome Browser custom track)
Alignm length: 378
Alignm identity: 286
Alignm E-value: 0
Alignm gaps (pig, cow): 243, 49

Conread position: 214-452
Cow position: chr20:20196875-20197101 (view UCSC Genome Browser custom track)
Alignm length: 239
Alignm identity: 187
Alignm E-value: 1.4013e-45
Alignm gaps (pig, cow): 57, 0

Conread position: 218-667
Cow position: chr20:7659475-7659029 (view UCSC Genome Browser custom track)
Alignm length: 463
Alignm identity: 333
Alignm E-value: 0
Alignm gaps (pig, cow): 236, 44

Conread position: 221-668
Cow position: chr20:13967522-13967084 (view UCSC Genome Browser custom track)
Alignm length: 453
Alignm identity: 342
Alignm E-value: 0
Alignm gaps (pig, cow): 15, 41

Conread position: 223-740
Cow position: chr20:22064812-22065304 (view UCSC Genome Browser custom track)
Alignm length: 520
Alignm identity: 348
Alignm E-value: 0
Alignm gaps (pig, cow): 166, 42

Conread position: 224-765
Cow position: chr20:5950889-5950369 (view UCSC Genome Browser custom track)
Alignm length: 549
Alignm identity: 379
Alignm E-value: 0
Alignm gaps (pig, cow): 376, 28

Conread position: 231-760
Cow position: chr20:41703901-41704424 (view UCSC Genome Browser custom track)
Alignm length: 542
Alignm identity: 370
Alignm E-value: 0
Alignm gaps (pig, cow): 144, 34

Conread position: 238-761
Cow position: chr20:22235066-22235563 (view UCSC Genome Browser custom track)
Alignm length: 525
Alignm identity: 357
Alignm E-value: 0
Alignm gaps (pig, cow): 358, 61

Conread position: 245-554
Cow position: chr20:20312976-20312682 (view UCSC Genome Browser custom track)
Alignm length: 313
Alignm identity: 241
Alignm E-value: 0
Alignm gaps (pig, cow): 211, 20

Conread position: 245-598
Cow position: chr20:40127575-40127236 (view UCSC Genome Browser custom track)
Alignm length: 355
Alignm identity: 254
Alignm E-value: 0
Alignm gaps (pig, cow): 211, 26

Conread position: 245-767
Cow position: chr20:10200102-10200621 (view UCSC Genome Browser custom track)
Alignm length: 536
Alignm identity: 405
Alignm E-value: 0
Alignm gaps (pig, cow): 79, 28

Conread position: 246-741
Cow position: chr20:10208567-10209051 (view UCSC Genome Browser custom track)
Alignm length: 504
Alignm identity: 339
Alignm E-value: 0
Alignm gaps (pig, cow): 128, 7

Conread position: 251-599
Cow position: chr20:3331527-3331177 (view UCSC Genome Browser custom track)
Alignm length: 357
Alignm identity: 253
Alignm E-value: 0
Alignm gaps (pig, cow): 124, 22

Conread position: 252-746
Cow position: chr20:11341037-11340556 (view UCSC Genome Browser custom track)
Alignm length: 503
Alignm identity: 355
Alignm E-value: 0
Alignm gaps (pig, cow): 123, 13

Conread position: 253-773
Cow position: chr20:8556504-8555993 (view UCSC Genome Browser custom track)
Alignm length: 530
Alignm identity: 365
Alignm E-value: 0
Alignm gaps (pig, cow): 6, 33

Conread position: 254-584
Cow position: chr20:20360003-20359689 (view UCSC Genome Browser custom track)
Alignm length: 334
Alignm identity: 223
Alignm E-value: 7e-28
Alignm gaps (pig, cow): 5, 10

Conread position: 259-512
Cow position: chr20:40185900-40185659 (view UCSC Genome Browser custom track)
Alignm length: 254
Alignm identity: 187
Alignm E-value: 2e-39
Alignm gaps (pig, cow): 36, 0

Conread position: 259-652
Cow position: chr20:29805884-29805492 (view UCSC Genome Browser custom track)
Alignm length: 404
Alignm identity: 278
Alignm E-value: 0
Alignm gaps (pig, cow): 114, 24

Conread position: 259-742
Cow position: chr20:12205939-12205499 (view UCSC Genome Browser custom track)
Alignm length: 489
Alignm identity: 328
Alignm E-value: 1e-34
Alignm gaps (pig, cow): 243, 32

Conread position: 259-748
Cow position: chr20:14759891-14759422 (view UCSC Genome Browser custom track)
Alignm length: 496
Alignm identity: 342
Alignm E-value: 0
Alignm gaps (pig, cow): 111, 38

Conread position: 260-590
Cow position: chr20:20471564-20471884 (view UCSC Genome Browser custom track)
Alignm length: 334
Alignm identity: 220
Alignm E-value: 2e-29
Alignm gaps (pig, cow): 76, 39

Conread position: 260-595
Cow position: chr20:34776960-34777284 (view UCSC Genome Browser custom track)
Alignm length: 336
Alignm identity: 257
Alignm E-value: 0
Alignm gaps (pig, cow): 39, 0

Conread position: 260-599
Cow position: chr20:40511983-40511648 (view UCSC Genome Browser custom track)
Alignm length: 343
Alignm identity: 255
Alignm E-value: 0
Alignm gaps (pig, cow): 131, 43

Conread position: 260-744
Cow position: chr20:14572582-14572130 (view UCSC Genome Browser custom track)
Alignm length: 488
Alignm identity: 352
Alignm E-value: 0
Alignm gaps (pig, cow): 196, 39

Conread position: 262-600
Cow position: chr20:17669958-17670293 (view UCSC Genome Browser custom track)
Alignm length: 345
Alignm identity: 234
Alignm E-value: 6e-38
Alignm gaps (pig, cow): 113, 37

Conread position: 262-760
Cow position: chr20:11741527-11741053 (view UCSC Genome Browser custom track)
Alignm length: 505
Alignm identity: 355
Alignm E-value: 0
Alignm gaps (pig, cow): 113, 37

Conread position: 262-764
Cow position: chr20:35176997-35176507 (view UCSC Genome Browser custom track)
Alignm length: 512
Alignm identity: 361
Alignm E-value: 0
Alignm gaps (pig, cow): 35, 72

Conread position: 265-599
Cow position: chr20:11923462-11923139 (view UCSC Genome Browser custom track)
Alignm length: 338
Alignm identity: 246
Alignm E-value: 0
Alignm gaps (pig, cow): 10, 35

Conread position: 265-695
Cow position: chr20:38578975-38578549 (view UCSC Genome Browser custom track)
Alignm length: 446
Alignm identity: 310
Alignm E-value: 0
Alignm gaps (pig, cow): 191, 31

Conread position: 265-739
Cow position: chr20:13829046-13829502 (view UCSC Genome Browser custom track)
Alignm length: 481
Alignm identity: 327
Alignm E-value: 0
Alignm gaps (pig, cow): 112, 26

Conread position: 265-755
Cow position: chr20:20983786-20984255 (view UCSC Genome Browser custom track)
Alignm length: 494
Alignm identity: 343
Alignm E-value: 0
Alignm gaps (pig, cow): 194, 34

Conread position: 265-759
Cow position: chr20:26996313-26996794 (view UCSC Genome Browser custom track)
Alignm length: 504
Alignm identity: 339
Alignm E-value: 0
Alignm gaps (pig, cow): 106, 34

Conread position: 268-767
Cow position: chr20:13023696-13023233 (view UCSC Genome Browser custom track)
Alignm length: 500
Alignm identity: 349
Alignm E-value: 0
Alignm gaps (pig, cow): 31, 0

Conread position: 269-496
Cow position: chr20:15235547-15235776 (view UCSC Genome Browser custom track)
Alignm length: 233
Alignm identity: 171
Alignm E-value: 2e-35
Alignm gaps (pig, cow): 106, 24

Conread position: 273-452
Cow position: chr20:24902685-24902500 (view UCSC Genome Browser custom track)
Alignm length: 190
Alignm identity: 147
Alignm E-value: 9e-31
Alignm gaps (pig, cow): 54, 26

Conread position: 274-486
Cow position: chr20:5025514-5025307 (view UCSC Genome Browser custom track)
Alignm length: 214
Alignm identity: 160
Alignm E-value: 2e-35
Alignm gaps (pig, cow): 182, 25

Conread position: 274-586
Cow position: chr20:14735465-14735765 (view UCSC Genome Browser custom track)
Alignm length: 315
Alignm identity: 235
Alignm E-value: 0
Alignm gaps (pig, cow): 182, 28

Conread position: 274-598
Cow position: chr20:11482351-11482027 (view UCSC Genome Browser custom track)
Alignm length: 330
Alignm identity: 244
Alignm E-value: 0
Alignm gaps (pig, cow): 101, 28

Conread position: 274-598
Cow position: chr20:21928686-21929012 (view UCSC Genome Browser custom track)
Alignm length: 331
Alignm identity: 247
Alignm E-value: 0
Alignm gaps (pig, cow): 25, 47

Conread position: 274-730
Cow position: chr20:14879574-14880019 (view UCSC Genome Browser custom track)
Alignm length: 463
Alignm identity: 334
Alignm E-value: 0
Alignm gaps (pig, cow): 101, 25

Conread position: 274-741
Cow position: chr20:7442336-7441898 (view UCSC Genome Browser custom track)
Alignm length: 471
Alignm identity: 339
Alignm E-value: 0
Alignm gaps (pig, cow): 36, 25

Conread position: 274-741
Cow position: chr20:38873224-38872756 (view UCSC Genome Browser custom track)
Alignm length: 479
Alignm identity: 320
Alignm E-value: 0
Alignm gaps (pig, cow): 118, 27

Conread position: 274-747
Cow position: chr20:28296078-28296548 (view UCSC Genome Browser custom track)
Alignm length: 481
Alignm identity: 336
Alignm E-value: 0
Alignm gaps (pig, cow): 89, 25

Conread position: 274-749
Cow position: chr20:12420833-12420368 (view UCSC Genome Browser custom track)
Alignm length: 480
Alignm identity: 341
Alignm E-value: 0
Alignm gaps (pig, cow): 103, 28

Conread position: 274-763
Cow position: chr20:18551151-18551633 (view UCSC Genome Browser custom track)
Alignm length: 500
Alignm identity: 340
Alignm E-value: 0
Alignm gaps (pig, cow): 103, 25

Conread position: 275-542
Cow position: chr20:29633202-29632948 (view UCSC Genome Browser custom track)
Alignm length: 268
Alignm identity: 193
Alignm E-value: 6e-38
Alignm gaps (pig, cow): 24, 0

Conread position: 275-550
Cow position: chr20:32069069-32068792 (view UCSC Genome Browser custom track)
Alignm length: 282
Alignm identity: 207
Alignm E-value: 4.2039e-45
Alignm gaps (pig, cow): 6, 25

Conread position: 275-598
Cow position: chr20:42459062-42458749 (view UCSC Genome Browser custom track)
Alignm length: 329
Alignm identity: 220
Alignm E-value: 7e-29
Alignm gaps (pig, cow): 102, 24

Conread position: 275-601
Cow position: chr20:35907257-35906940 (view UCSC Genome Browser custom track)
Alignm length: 334
Alignm identity: 247
Alignm E-value: 0
Alignm gaps (pig, cow): 181, 28

Conread position: 275-740
Cow position: chr20:6890494-6890986 (view UCSC Genome Browser custom track)
Alignm length: 501
Alignm identity: 365
Alignm E-value: 0
Alignm gaps (pig, cow): 23, 31

Conread position: 276-515
Cow position: chr20:8020685-8020923 (view UCSC Genome Browser custom track)
Alignm length: 246
Alignm identity: 182
Alignm E-value: 2e-37
Alignm gaps (pig, cow): 105, 27

Conread position: 276-524
Cow position: chr20:26679914-26680157 (view UCSC Genome Browser custom track)
Alignm length: 253
Alignm identity: 196
Alignm E-value: 0
Alignm gaps (pig, cow): 99, 26

Conread position: 276-764
Cow position: chr20:34251888-34251402 (view UCSC Genome Browser custom track)
Alignm length: 505
Alignm identity: 362
Alignm E-value: 0
Alignm gaps (pig, cow): 140, 23

Conread position: 278-476
Cow position: chr20:38415180-38414982 (view UCSC Genome Browser custom track)
Alignm length: 202
Alignm identity: 149
Alignm E-value: 1e-31
Alignm gaps (pig, cow): 97, 21

Conread position: 279-748
Cow position: chr20:38551167-38551627 (view UCSC Genome Browser custom track)
Alignm length: 482
Alignm identity: 330
Alignm E-value: 0
Alignm gaps (pig, cow): 96, 22

Conread position: 280-761
Cow position: chr20:6602831-6603293 (view UCSC Genome Browser custom track)
Alignm length: 487
Alignm identity: 338
Alignm E-value: 0
Alignm gaps (pig, cow): 24, 91

Conread position: 281-745
Cow position: chr20:39325180-39325640 (view UCSC Genome Browser custom track)
Alignm length: 472
Alignm identity: 322
Alignm E-value: 0
Alignm gaps (pig, cow): 91, 21

Conread position: 284-496
Cow position: chr20:5269270-5269065 (view UCSC Genome Browser custom track)
Alignm length: 216
Alignm identity: 170
Alignm E-value: 2e-39
Alignm gaps (pig, cow): 81, 5

Conread position: 284-564
Cow position: chr20:15544100-15543824 (view UCSC Genome Browser custom track)
Alignm length: 287
Alignm identity: 190
Alignm E-value: 4e-23
Alignm gaps (pig, cow): 91, 15

Conread position: 288-758
Cow position: chr20:20739487-20739010 (view UCSC Genome Browser custom track)
Alignm length: 493
Alignm identity: 352
Alignm E-value: 0
Alignm gaps (pig, cow): 130, 11

Conread position: 291-742
Cow position: chr20:23846869-23846420 (view UCSC Genome Browser custom track)
Alignm length: 460
Alignm identity: 314
Alignm E-value: 0
Alignm gaps (pig, cow): 84, 104

Conread position: 295-765
Cow position: chr20:34098151-34097680 (view UCSC Genome Browser custom track)
Alignm length: 481
Alignm identity: 350
Alignm E-value: 0
Alignm gaps (pig, cow): 161, 128

Conread position: 296-598
Cow position: chr20:28067618-28067316 (view UCSC Genome Browser custom track)
Alignm length: 311
Alignm identity: 225
Alignm E-value: 4.2039e-45
Alignm gaps (pig, cow): 163, 125

Conread position: 299-562
Cow position: chr20:37200164-37200433 (view UCSC Genome Browser custom track)
Alignm length: 273
Alignm identity: 204
Alignm E-value: 9.80909e-45
Alignm gaps (pig, cow): 78, 56

Conread position: 299-739
Cow position: chr20:9923408-9923833 (view UCSC Genome Browser custom track)
Alignm length: 447
Alignm identity: 312
Alignm E-value: 0
Alignm gaps (pig, cow): 171, 54

Conread position: 299-760
Cow position: chr20:13994620-13995073 (view UCSC Genome Browser custom track)
Alignm length: 470
Alignm identity: 328
Alignm E-value: 0
Alignm gaps (pig, cow): 68, 127

Conread position: 300-762
Cow position: chr20:3141394-3141840 (view UCSC Genome Browser custom track)
Alignm length: 466
Alignm identity: 332
Alignm E-value: 0
Alignm gaps (pig, cow): 5, 90

Conread position: 302-598
Cow position: chr20:37165540-37165817 (view UCSC Genome Browser custom track)
Alignm length: 297
Alignm identity: 213
Alignm E-value: 2e-38
Alignm gaps (pig, cow): 121, 0

Conread position: 302-599
Cow position: chr20:31323611-31323895 (view UCSC Genome Browser custom track)
Alignm length: 300
Alignm identity: 215
Alignm E-value: 8.99998e-41
Alignm gaps (pig, cow): 24, 105

Conread position: 303-599
Cow position: chr20:30648402-30648093 (view UCSC Genome Browser custom track)
Alignm length: 317
Alignm identity: 212
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 43, 9

Conread position: 304-567
Cow position: chr20:34364851-34365104 (view UCSC Genome Browser custom track)
Alignm length: 265
Alignm identity: 185
Alignm E-value: 9e-31
Alignm gaps (pig, cow): 250, 43

Conread position: 304-576
Cow position: chr20:11864320-11864048 (view UCSC Genome Browser custom track)
Alignm length: 279
Alignm identity: 201
Alignm E-value: 3e-40
Alignm gaps (pig, cow): 71, 189

Conread position: 304-765
Cow position: chr20:35741569-35742039 (view UCSC Genome Browser custom track)
Alignm length: 482
Alignm identity: 334
Alignm E-value: 0
Alignm gaps (pig, cow): 121, 82

Conread position: 306-749
Cow position: chr20:3740183-3739757 (view UCSC Genome Browser custom track)
Alignm length: 447
Alignm identity: 299
Alignm E-value: 0
Alignm gaps (pig, cow): 11, 163

Conread position: 310-550
Cow position: chr20:37272538-37272774 (view UCSC Genome Browser custom track)
Alignm length: 244
Alignm identity: 187
Alignm E-value: 9.80909e-45
Alignm gaps (pig, cow): 50, 28

Conread position: 310-751
Cow position: chr20:14980693-14980253 (view UCSC Genome Browser custom track)
Alignm length: 453
Alignm identity: 326
Alignm E-value: 0
Alignm gaps (pig, cow): 65, 113

Conread position: 318-718
Cow position: chr20:3321308-3320911 (view UCSC Genome Browser custom track)
Alignm length: 411
Alignm identity: 279
Alignm E-value: 9.99967e-42
Alignm gaps (pig, cow): 138, 67

Conread position: 318-750
Cow position: chr20:3254878-3255286 (view UCSC Genome Browser custom track)
Alignm length: 441
Alignm identity: 289
Alignm E-value: 2e-27
Alignm gaps (pig, cow): 28, 108

Conread position: 319-566
Cow position: chr20:28831794-28832047 (view UCSC Genome Browser custom track)
Alignm length: 256
Alignm identity: 202
Alignm E-value: 0
Alignm gaps (pig, cow): 31, 108

Conread position: 320-746
Cow position: chr20:7439017-7438608 (view UCSC Genome Browser custom track)
Alignm length: 429
Alignm identity: 279
Alignm E-value: 4e-34
Alignm gaps (pig, cow): 136, 25

Conread position: 321-599
Cow position: chr20:14100605-14100327 (view UCSC Genome Browser custom track)
Alignm length: 284
Alignm identity: 202
Alignm E-value: 2e-39
Alignm gaps (pig, cow): 49, 29

Conread position: 321-757
Cow position: chr20:5814401-5814825 (view UCSC Genome Browser custom track)
Alignm length: 446
Alignm identity: 309
Alignm E-value: 0
Alignm gaps (pig, cow): 8, 107

Conread position: 324-561
Cow position: chr20:41403405-41403647 (view UCSC Genome Browser custom track)
Alignm length: 245
Alignm identity: 176
Alignm E-value: 5e-35
Alignm gaps (pig, cow): 84, 173

Conread position: 326-566
Cow position: chr20:10348588-10348826 (view UCSC Genome Browser custom track)
Alignm length: 245
Alignm identity: 179
Alignm E-value: 6e-37
Alignm gaps (pig, cow): 130, 39

Conread position: 328-526
Cow position: chr20:9701735-9701533 (view UCSC Genome Browser custom track)
Alignm length: 206
Alignm identity: 157
Alignm E-value: 4e-34
Alignm gaps (pig, cow): 128, 20

Conread position: 328-771
Cow position: chr20:32523308-32523737 (view UCSC Genome Browser custom track)
Alignm length: 448
Alignm identity: 299
Alignm E-value: 0
Alignm gaps (pig, cow): 96, 22

Conread position: 329-576
Cow position: chr20:283088-282840 (view UCSC Genome Browser custom track)
Alignm length: 256
Alignm identity: 185
Alignm E-value: 1e-34
Alignm gaps (pig, cow): 48, 115

Conread position: 329-740
Cow position: chr20:39255123-39254718 (view UCSC Genome Browser custom track)
Alignm length: 420
Alignm identity: 265
Alignm E-value: 2e-25
Alignm gaps (pig, cow): 46, 26

Conread position: 331-598
Cow position: chr20:32988989-32988724 (view UCSC Genome Browser custom track)
Alignm length: 278
Alignm identity: 193
Alignm E-value: 2e-26
Alignm gaps (pig, cow): 122, 34

Conread position: 332-765
Cow position: chr20:15569106-15568694 (view UCSC Genome Browser custom track)
Alignm length: 440
Alignm identity: 296
Alignm E-value: 2e-38
Alignm gaps (pig, cow): 39, 94

Conread position: 333-599
Cow position: chr20:5636325-5636589 (view UCSC Genome Browser custom track)
Alignm length: 272
Alignm identity: 197
Alignm E-value: 2e-39
Alignm gaps (pig, cow): 42, 94

Conread position: 334-577
Cow position: chr20:24727220-24727449 (view UCSC Genome Browser custom track)
Alignm length: 245
Alignm identity: 177
Alignm E-value: 1e-32
Alignm gaps (pig, cow): 89, 31

Conread position: 334-673
Cow position: chr20:21761622-21761964 (view UCSC Genome Browser custom track)
Alignm length: 351
Alignm identity: 241
Alignm E-value: 6e-38
Alignm gaps (pig, cow): 89, 119

Conread position: 335-526
Cow position: chr20:41309383-41309575 (view UCSC Genome Browser custom track)
Alignm length: 198
Alignm identity: 148
Alignm E-value: 7e-29
Alignm gaps (pig, cow): 40, 76

Conread position: 335-598
Cow position: chr20:13025761-13025503 (view UCSC Genome Browser custom track)
Alignm length: 269
Alignm identity: 196
Alignm E-value: 7e-39
Alignm gaps (pig, cow): 121, 19

Conread position: 336-678
Cow position: chr20:5025095-5024758 (view UCSC Genome Browser custom track)
Alignm length: 353
Alignm identity: 237
Alignm E-value: 2e-29
Alignm gaps (pig, cow): 124, 59

Conread position: 338-598
Cow position: chr20:36010639-36010903 (view UCSC Genome Browser custom track)
Alignm length: 267
Alignm identity: 194
Alignm E-value: 9.99967e-42
Alignm gaps (pig, cow): 37, 160

Conread position: 339-737
Cow position: chr20:28441177-28441559 (view UCSC Genome Browser custom track)
Alignm length: 405
Alignm identity: 261
Alignm E-value: 2e-25
Alignm gaps (pig, cow): 36, 76

Conread position: 340-596
Cow position: chr20:42197179-42197418 (view UCSC Genome Browser custom track)
Alignm length: 262
Alignm identity: 187
Alignm E-value: 2e-25
Alignm gaps (pig, cow): 35, 87

Conread position: 340-598
Cow position: chr20:40449859-40450129 (view UCSC Genome Browser custom track)
Alignm length: 275
Alignm identity: 197
Alignm E-value: 3e-31
Alignm gaps (pig, cow): 35, 14

Conread position: 341-742
Cow position: chr20:4334667-4334293 (view UCSC Genome Browser custom track)
Alignm length: 403
Alignm identity: 281
Alignm E-value: 1.4013e-45
Alignm gaps (pig, cow): 115, 38

Conread position: 341-770
Cow position: chr20:41089941-41089522 (view UCSC Genome Browser custom track)
Alignm length: 441
Alignm identity: 300
Alignm E-value: 1.00053e-42
Alignm gaps (pig, cow): 34, 84

Conread position: 342-452
Cow position: chr20:9729939-9730048 (view UCSC Genome Browser custom track)
Alignm length: 112
Alignm identity: 94
Alignm E-value: 1e-24
Alignm gaps (pig, cow): 36, 80

Conread position: 342-477
Cow position: chr20:20934909-20934767 (view UCSC Genome Browser custom track)
Alignm length: 143
Alignm identity: 113
Alignm E-value: 1e-24
Alignm gaps (pig, cow): 69, 0

Conread position: 342-560
Cow position: chr20:39247763-39247982 (view UCSC Genome Browser custom track)
Alignm length: 224
Alignm identity: 161
Alignm E-value: 9e-31
Alignm gaps (pig, cow): 33, 52

Conread position: 342-747
Cow position: chr20:28249038-28249433 (view UCSC Genome Browser custom track)
Alignm length: 410
Alignm identity: 274
Alignm E-value: 9.99967e-42
Alignm gaps (pig, cow): 82, 29

Conread position: 343-602
Cow position: chr20:14540207-14540455 (view UCSC Genome Browser custom track)
Alignm length: 260
Alignm identity: 171
Alignm E-value: 1e-22
Alignm gaps (pig, cow): 80, 0

Conread position: 344-638
Cow position: chr20:14917156-14917452 (view UCSC Genome Browser custom track)
Alignm length: 305
Alignm identity: 209
Alignm E-value: 8e-30
Alignm gaps (pig, cow): 68, 125

Conread position: 347-747
Cow position: chr20:32583169-32583570 (view UCSC Genome Browser custom track)
Alignm length: 414
Alignm identity: 277
Alignm E-value: 2e-38
Alignm gaps (pig, cow): 109, 39

Conread position: 350-598
Cow position: chr20:40446191-40446436 (view UCSC Genome Browser custom track)
Alignm length: 252
Alignm identity: 177
Alignm E-value: 1e-31
Alignm gaps (pig, cow): 25, 131

Conread position: 350-751
Cow position: chr20:30710788-30710389 (view UCSC Genome Browser custom track)
Alignm length: 416
Alignm identity: 282
Alignm E-value: 3.00004e-41
Alignm gaps (pig, cow): 25, 151

Conread position: 354-598
Cow position: chr20:8098147-8098393 (view UCSC Genome Browser custom track)
Alignm length: 248
Alignm identity: 165
Alignm E-value: 5e-26
Alignm gaps (pig, cow): 11, 155

Conread position: 354-740
Cow position: chr20:34221347-34221725 (view UCSC Genome Browser custom track)
Alignm length: 393
Alignm identity: 286
Alignm E-value: 0
Alignm gaps (pig, cow): 79, 8

Conread position: 355-598
Cow position: chr20:4332005-4332237 (view UCSC Genome Browser custom track)
Alignm length: 245
Alignm identity: 178
Alignm E-value: 4e-34
Alignm gaps (pig, cow): 101, 52

Conread position: 356-601
Cow position: chr20:23643266-23643027 (view UCSC Genome Browser custom track)
Alignm length: 248
Alignm identity: 170
Alignm E-value: 6e-27
Alignm gaps (pig, cow): 100, 17

Conread position: 359-727
Cow position: chr20:10188146-10188505 (view UCSC Genome Browser custom track)
Alignm length: 373
Alignm identity: 250
Alignm E-value: 8e-40
Alignm gaps (pig, cow): 97, 73

Conread position: 360-567
Cow position: chr20:4892950-4892736 (view UCSC Genome Browser custom track)
Alignm length: 215
Alignm identity: 154
Alignm E-value: 8e-30
Alignm gaps (pig, cow): 63, 0

Conread position: 360-599
Cow position: chr20:28955827-28955593 (view UCSC Genome Browser custom track)
Alignm length: 242
Alignm identity: 173
Alignm E-value: 4e-33
Alignm gaps (pig, cow): 65, 26

Conread position: 360-744
Cow position: chr20:18379254-18379623 (view UCSC Genome Browser custom track)
Alignm length: 386
Alignm identity: 245
Alignm E-value: 2e-28
Alignm gaps (pig, cow): 150, 67

Conread position: 361-597
Cow position: chr20:34084936-34085174 (view UCSC Genome Browser custom track)
Alignm length: 244
Alignm identity: 169
Alignm E-value: 6e-27
Alignm gaps (pig, cow): 55, 24

Conread position: 364-463
Cow position: chr20:5633482-5633382 (view UCSC Genome Browser custom track)
Alignm length: 101
Alignm identity: 87
Alignm E-value: 1e-24
Alignm gaps (pig, cow): 92, 0

Conread position: 365-595
Cow position: chr20:24000923-24000693 (view UCSC Genome Browser custom track)
Alignm length: 233
Alignm identity: 173
Alignm E-value: 8.99998e-41
Alignm gaps (pig, cow): 21, 130

Conread position: 365-598
Cow position: chr20:32662022-32661779 (view UCSC Genome Browser custom track)
Alignm length: 247
Alignm identity: 169
Alignm E-value: 4e-22
Alignm gaps (pig, cow): 47, 32

Conread position: 367-586
Cow position: chr20:30992018-30992237 (view UCSC Genome Browser custom track)
Alignm length: 224
Alignm identity: 158
Alignm E-value: 2e-28
Alignm gaps (pig, cow): 58, 125

Conread position: 370-752
Cow position: chr20:36633699-36634089 (view UCSC Genome Browser custom track)
Alignm length: 400
Alignm identity: 283
Alignm E-value: 0
Alignm gaps (pig, cow): 86, 124

Conread position: 370-764
Cow position: chr20:28594162-28594558 (view UCSC Genome Browser custom track)
Alignm length: 408
Alignm identity: 279
Alignm E-value: 4.06377e-44
Alignm gaps (pig, cow): 19, 60

Conread position: 372-740
Cow position: chr20:20099709-20099359 (view UCSC Genome Browser custom track)
Alignm length: 372
Alignm identity: 250
Alignm E-value: 1e-32
Alignm gaps (pig, cow): 84, 19

Conread position: 372-754
Cow position: chr20:31289382-31289762 (view UCSC Genome Browser custom track)
Alignm length: 398
Alignm identity: 264
Alignm E-value: 3e-31
Alignm gaps (pig, cow): 44, 119

Conread position: 373-567
Cow position: chr20:11188920-11188725 (view UCSC Genome Browser custom track)
Alignm length: 201
Alignm identity: 148
Alignm E-value: 2e-27
Alignm gaps (pig, cow): 38, 123

Conread position: 373-597
Cow position: chr20:13794874-13795087 (view UCSC Genome Browser custom track)
Alignm length: 226
Alignm identity: 172
Alignm E-value: 6e-38
Alignm gaps (pig, cow): 83, 66

Conread position: 373-598
Cow position: chr20:36040355-36040582 (view UCSC Genome Browser custom track)
Alignm length: 232
Alignm identity: 172
Alignm E-value: 2e-35
Alignm gaps (pig, cow): 8, 28

Conread position: 374-576
Cow position: chr20:41174276-41174078 (view UCSC Genome Browser custom track)
Alignm length: 204
Alignm identity: 142
Alignm E-value: 1e-23
Alignm gaps (pig, cow): 39, 19

Conread position: 375-751
Cow position: chr20:33067486-33067106 (view UCSC Genome Browser custom track)
Alignm length: 395
Alignm identity: 275
Alignm E-value: 9.99967e-42
Alignm gaps (pig, cow): 37, 74

Conread position: 381-598
Cow position: chr20:19616379-19616599 (view UCSC Genome Browser custom track)
Alignm length: 221
Alignm identity: 158
Alignm E-value: 4e-33
Alignm gaps (pig, cow): 42, 0

Conread position: 381-638
Cow position: chr20:23103114-23103366 (view UCSC Genome Browser custom track)
Alignm length: 261
Alignm identity: 187
Alignm E-value: 5e-36
Alignm gaps (pig, cow): 75, 10

Conread position: 383-739
Cow position: chr20:5009627-5009974 (view UCSC Genome Browser custom track)
Alignm length: 365
Alignm identity: 246
Alignm E-value: 3e-31
Alignm gaps (pig, cow): 30, 88

Conread position: 385-768
Cow position: chr20:24711732-24712111 (view UCSC Genome Browser custom track)
Alignm length: 394
Alignm identity: 282
Alignm E-value: 0
Alignm gaps (pig, cow): 71, 38

Conread position: 386-588
Cow position: chr20:34901467-34901669 (view UCSC Genome Browser custom track)
Alignm length: 206
Alignm identity: 147
Alignm E-value: 2e-27
Alignm gaps (pig, cow): 69, 37

Conread position: 387-543
Cow position: chr20:38935337-38935181 (view UCSC Genome Browser custom track)
Alignm length: 160
Alignm identity: 119
Alignm E-value: 4e-22
Alignm gaps (pig, cow): 69, 36

Conread position: 387-599
Cow position: chr20:29404277-29404067 (view UCSC Genome Browser custom track)
Alignm length: 214
Alignm identity: 150
Alignm E-value: 2e-28
Alignm gaps (pig, cow): 70, 38

Conread position: 387-749
Cow position: chr20:16509393-16509747 (view UCSC Genome Browser custom track)
Alignm length: 367
Alignm identity: 241
Alignm E-value: 1e-31
Alignm gaps (pig, cow): 37, 53

Conread position: 389-762
Cow position: chr20:15118177-15118543 (view UCSC Genome Browser custom track)
Alignm length: 376
Alignm identity: 253
Alignm E-value: 9.94922e-44
Alignm gaps (pig, cow): 34, 121

Conread position: 390-730
Cow position: chr20:34787041-34786709 (view UCSC Genome Browser custom track)
Alignm length: 349
Alignm identity: 227
Alignm E-value: 1e-22
Alignm gaps (pig, cow): 111, 31

Conread position: 391-749
Cow position: chr20:7738323-7737982 (view UCSC Genome Browser custom track)
Alignm length: 360
Alignm identity: 236
Alignm E-value: 9e-31
Alignm gaps (pig, cow): 66, 16

Conread position: 391-764
Cow position: chr20:33439079-33438689 (view UCSC Genome Browser custom track)
Alignm length: 398
Alignm identity: 275
Alignm E-value: 8e-40
Alignm gaps (pig, cow): 10, 93

Conread position: 393-726
Cow position: chr20:15822457-15822779 (view UCSC Genome Browser custom track)
Alignm length: 339
Alignm identity: 226
Alignm E-value: 2e-27
Alignm gaps (pig, cow): 45, 32

Conread position: 398-745
Cow position: chr20:8700017-8699676 (view UCSC Genome Browser custom track)
Alignm length: 356
Alignm identity: 230
Alignm E-value: 3e-21
Alignm gaps (pig, cow): 9, 95

Conread position: 399-744
Cow position: chr20:5078532-5078883 (view UCSC Genome Browser custom track)
Alignm length: 353
Alignm identity: 236
Alignm E-value: 3e-40
Alignm gaps (pig, cow): 24, 272

Conread position: 400-765
Cow position: chr20:11359716-11359372 (view UCSC Genome Browser custom track)
Alignm length: 370
Alignm identity: 255
Alignm E-value: 2e-35
Alignm gaps (pig, cow): 21, 45

Conread position: 406-737
Cow position: chr20:11008088-11008413 (view UCSC Genome Browser custom track)
Alignm length: 333
Alignm identity: 230
Alignm E-value: 9.80909e-45
Alignm gaps (pig, cow): 50, 17

Conread position: 407-561
Cow position: chr20:37357524-37357678 (view UCSC Genome Browser custom track)
Alignm length: 157
Alignm identity: 127
Alignm E-value: 4e-33
Alignm gaps (pig, cow): 49, 84

Conread position: 411-594
Cow position: chr20:16491993-16492176 (view UCSC Genome Browser custom track)
Alignm length: 186
Alignm identity: 141
Alignm E-value: 4e-33
Alignm gaps (pig, cow): 45, 98

Conread position: 412-727
Cow position: chr20:39153168-39153478 (view UCSC Genome Browser custom track)
Alignm length: 321
Alignm identity: 205
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 44, 27

Conread position: 412-761
Cow position: chr20:33819142-33819493 (view UCSC Genome Browser custom track)
Alignm length: 356
Alignm identity: 243
Alignm E-value: 9.94922e-44
Alignm gaps (pig, cow): 44, 80

Conread position: 413-765
Cow position: chr20:11548798-11548459 (view UCSC Genome Browser custom track)
Alignm length: 356
Alignm identity: 246
Alignm E-value: 8.99998e-41
Alignm gaps (pig, cow): 43, 78

Conread position: 413-766
Cow position: chr20:35192701-35193026 (view UCSC Genome Browser custom track)
Alignm length: 355
Alignm identity: 240
Alignm E-value: 2e-29
Alignm gaps (pig, cow): 43, 75

Conread position: 414-761
Cow position: chr20:11135832-11135489 (view UCSC Genome Browser custom track)
Alignm length: 354
Alignm identity: 237
Alignm E-value: 2e-35
Alignm gaps (pig, cow): 181, 38

Conread position: 415-646
Cow position: chr20:36741401-36741638 (view UCSC Genome Browser custom track)
Alignm length: 242
Alignm identity: 165
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 41, 79

Conread position: 415-722
Cow position: chr20:38670684-38670991 (view UCSC Genome Browser custom track)
Alignm length: 321
Alignm identity: 220
Alignm E-value: 6e-27
Alignm gaps (pig, cow): 41, 73

Conread position: 415-748
Cow position: chr20:32709524-32709189 (view UCSC Genome Browser custom track)
Alignm length: 348
Alignm identity: 233
Alignm E-value: 6e-27
Alignm gaps (pig, cow): 41, 25

Conread position: 415-758
Cow position: chr20:31311457-31311793 (view UCSC Genome Browser custom track)
Alignm length: 347
Alignm identity: 241
Alignm E-value: 9.80909e-45
Alignm gaps (pig, cow): 41, 78

Conread position: 416-597
Cow position: chr20:13983289-13983462 (view UCSC Genome Browser custom track)
Alignm length: 183
Alignm identity: 131
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 101, 40

Conread position: 416-727
Cow position: chr20:33976408-33976719 (view UCSC Genome Browser custom track)
Alignm length: 319
Alignm identity: 215
Alignm E-value: 9e-31
Alignm gaps (pig, cow): 41, 134

Conread position: 422-733
Cow position: chr20:20898654-20898353 (view UCSC Genome Browser custom track)
Alignm length: 315
Alignm identity: 215
Alignm E-value: 1e-33
Alignm gaps (pig, cow): 34, 18

Conread position: 422-744
Cow position: chr20:6248663-6248352 (view UCSC Genome Browser custom track)
Alignm length: 327
Alignm identity: 230
Alignm E-value: 8e-40
Alignm gaps (pig, cow): 86, 34

Conread position: 423-598
Cow position: chr20:23506536-23506363 (view UCSC Genome Browser custom track)
Alignm length: 177
Alignm identity: 136
Alignm E-value: 1e-32
Alignm gaps (pig, cow): 33, 72

Conread position: 425-667
Cow position: chr20:20056549-20056303 (view UCSC Genome Browser custom track)
Alignm length: 254
Alignm identity: 180
Alignm E-value: 2e-26
Alignm gaps (pig, cow): 36, 69

Conread position: 425-722
Cow position: chr20:354961-354673 (view UCSC Genome Browser custom track)
Alignm length: 302
Alignm identity: 208
Alignm E-value: 3e-32
Alignm gaps (pig, cow): 31, 77

Conread position: 425-744
Cow position: chr20:21428101-21428405 (view UCSC Genome Browser custom track)
Alignm length: 322
Alignm identity: 216
Alignm E-value: 2e-29
Alignm gaps (pig, cow): 117, 27

Conread position: 427-739
Cow position: chr20:16941352-16941040 (view UCSC Genome Browser custom track)
Alignm length: 320
Alignm identity: 219
Alignm E-value: 1e-34
Alignm gaps (pig, cow): 20, 32

Conread position: 431-591
Cow position: chr20:37338856-37339016 (view UCSC Genome Browser custom track)
Alignm length: 162
Alignm identity: 117
Alignm E-value: 4e-23
Alignm gaps (pig, cow): 25, 67

Conread position: 431-598
Cow position: chr20:39962517-39962682 (view UCSC Genome Browser custom track)
Alignm length: 169
Alignm identity: 123
Alignm E-value: 1e-23
Alignm gaps (pig, cow): 26, 63

Conread position: 431-760
Cow position: chr20:16818357-16818681 (view UCSC Genome Browser custom track)
Alignm length: 335
Alignm identity: 224
Alignm E-value: 1e-32
Alignm gaps (pig, cow): 25, 77

Conread position: 432-768
Cow position: chr20:38514724-38515059 (view UCSC Genome Browser custom track)
Alignm length: 343
Alignm identity: 225
Alignm E-value: 3e-31
Alignm gaps (pig, cow): 24, 58

Conread position: 436-728
Cow position: chr20:10772150-10772462 (view UCSC Genome Browser custom track)
Alignm length: 315
Alignm identity: 215
Alignm E-value: 2e-27
Alignm gaps (pig, cow): 20, 58

Conread position: 445-744
Cow position: chr20:39016921-39016622 (view UCSC Genome Browser custom track)
Alignm length: 307
Alignm identity: 212
Alignm E-value: 2e-35
Alignm gaps (pig, cow): 11, 49

Conread position: 445-746
Cow position: chr20:24902343-24902025 (view UCSC Genome Browser custom track)
Alignm length: 321
Alignm identity: 217
Alignm E-value: 8e-30
Alignm gaps (pig, cow): 11, 49

Conread position: 447-747
Cow position: chr20:9376426-9376711 (view UCSC Genome Browser custom track)
Alignm length: 303
Alignm identity: 204
Alignm E-value: 1e-24
Alignm gaps (pig, cow): 9, 47

Conread position: 458-764
Cow position: chr20:16096810-16097110 (view UCSC Genome Browser custom track)
Alignm length: 307
Alignm identity: 199
Alignm E-value: 2e-28
Alignm gaps (pig, cow): 35, 0

Conread position: 468-765
Cow position: chr20:25953246-25953535 (view UCSC Genome Browser custom track)
Alignm length: 301
Alignm identity: 196
Alignm E-value: 4e-23
Alignm gaps (pig, cow): 125, 25

Conread position: 469-740
Cow position: chr20:12126324-12126058 (view UCSC Genome Browser custom track)
Alignm length: 277
Alignm identity: 193
Alignm E-value: 3e-31
Alignm gaps (pig, cow): 187, 23

Conread position: 469-752
Cow position: chr20:34083700-34083976 (view UCSC Genome Browser custom track)
Alignm length: 288
Alignm identity: 197
Alignm E-value: 2e-29
Alignm gaps (pig, cow): 131, 24

Conread position: 473-728
Cow position: chr20:16291678-16291922 (view UCSC Genome Browser custom track)
Alignm length: 259
Alignm identity: 174
Alignm E-value: 9e-21
Alignm gaps (pig, cow): 161, 20

Conread position: 499-747
Cow position: chr20:20158143-20158381 (view UCSC Genome Browser custom track)
Alignm length: 251
Alignm identity: 170
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 10, 102

Conread position: 507-767
Cow position: chr20:30744705-30744450 (view UCSC Genome Browser custom track)
Alignm length: 266
Alignm identity: 186
Alignm E-value: 2e-29
Alignm gaps (pig, cow): 92, 117

Conread position: 510-741
Cow position: chr20:34202653-34202886 (view UCSC Genome Browser custom track)
Alignm length: 240
Alignm identity: 166
Alignm E-value: 4e-24
Alignm gaps (pig, cow): 16, 115

Conread position: 510-763
Cow position: chr20:25021447-25021697 (view UCSC Genome Browser custom track)
Alignm length: 257
Alignm identity: 175
Alignm E-value: 6e-27
Alignm gaps (pig, cow): 97, 113

Conread position: 510-765
Cow position: chr20:14282939-14283191 (view UCSC Genome Browser custom track)
Alignm length: 258
Alignm identity: 176
Alignm E-value: 3e-30
Alignm gaps (pig, cow): 134, 92

Conread position: 530-745
Cow position: chr20:21325365-21325572 (view UCSC Genome Browser custom track)
Alignm length: 218
Alignm identity: 150
Alignm E-value: 3e-21
Alignm gaps (pig, cow): 105, 70

Conread position: 530-762
Cow position: chr20:30639744-30639513 (view UCSC Genome Browser custom track)
Alignm length: 237
Alignm identity: 165
Alignm E-value: 7e-28
Alignm gaps (pig, cow): 74, 95

Conread position: 531-740
Cow position: chr20:21291700-21291912 (view UCSC Genome Browser custom track)
Alignm length: 218
Alignm identity: 152
Alignm E-value: 9e-21
Alignm gaps (pig, cow): 71, 93

Conread position: 531-765
Cow position: chr20:27315022-27315244 (view UCSC Genome Browser custom track)
Alignm length: 235
Alignm identity: 162
Alignm E-value: 1e-24
Alignm gaps (pig, cow): 33, 0

Conread position: 533-771
Cow position: chr20:2316383-2316153 (view UCSC Genome Browser custom track)
Alignm length: 240
Alignm identity: 161
Alignm E-value: 1e-22
Alignm gaps (pig, cow): 160, 70

Conread position: 536-772
Cow position: chr20:37273043-37273268 (view UCSC Genome Browser custom track)
Alignm length: 237
Alignm identity: 165
Alignm E-value: 7e-28
Alignm gaps (pig, cow): 64, 0

Conread position: 544-749
Cow position: chr20:9034163-9033964 (view UCSC Genome Browser custom track)
Alignm length: 207
Alignm identity: 148
Alignm E-value: 2e-26
Alignm gaps (pig, cow): 58, 77

Conread position: 545-739
Cow position: chr20:4892065-4891876 (view UCSC Genome Browser custom track)
Alignm length: 196
Alignm identity: 137
Alignm E-value: 1e-22
Alignm gaps (pig, cow): 103, 59

Conread position: 546-744
Cow position: chr20:36842631-36842833 (view UCSC Genome Browser custom track)
Alignm length: 206
Alignm identity: 145
Alignm E-value: 1e-22
Alignm gaps (pig, cow): 56, 51

Conread position: 549-765
Cow position: chr20:25464987-25464778 (view UCSC Genome Browser custom track)
Alignm length: 217
Alignm identity: 150
Alignm E-value: 2e-25
Alignm gaps (pig, cow): 53, 0

Conread position: 550-743
Cow position: chr20:8679603-8679414 (view UCSC Genome Browser custom track)
Alignm length: 199
Alignm identity: 143
Alignm E-value: 9e-21
Alignm gaps (pig, cow): 50, 20

Conread position: 554-740
Cow position: chr20:9730060-9730247 (view UCSC Genome Browser custom track)
Alignm length: 190
Alignm identity: 132
Alignm E-value: 3e-21
Alignm gaps (pig, cow): 82, 62

Conread position: 554-747
Cow position: chr20:22851541-22851726 (view UCSC Genome Browser custom track)
Alignm length: 194
Alignm identity: 138
Alignm E-value: 4e-23
Alignm gaps (pig, cow): 63, 0

Conread position: 556-742
Cow position: chr20:37229019-37228823 (view UCSC Genome Browser custom track)
Alignm length: 198
Alignm identity: 144
Alignm E-value: 1e-23
Alignm gaps (pig, cow): 45, 192

Conread position: 557-759
Cow position: chr20:37357922-37358122 (view UCSC Genome Browser custom track)
Alignm length: 206
Alignm identity: 148
Alignm E-value: 2e-27
Alignm gaps (pig, cow): 87, 45

Conread position: 597-736
Cow position: chr20:30027474-30027613 (view UCSC Genome Browser custom track)
Alignm length: 142
Alignm identity: 108
Alignm E-value: 4e-22
Alignm gaps (pig, cow): 61, 35

Conread position: 597-767
Cow position: chr20:7709655-7709480 (view UCSC Genome Browser custom track)
Alignm length: 176
Alignm identity: 126
Alignm E-value: 4e-23
Alignm gaps (pig, cow): 36, 0

Conread position: 600-746
Cow position: chr20:15846884-15847030 (view UCSC Genome Browser custom track)
Alignm length: 150
Alignm identity: 116
Alignm E-value: 1e-24
Alignm gaps (pig, cow): 36, 58

Conread position: 601-741
Cow position: chr20:18659209-18659077 (view UCSC Genome Browser custom track)
Alignm length: 141
Alignm identity: 110
Alignm E-value: 4e-22
Alignm gaps (pig, cow): 30, 0

Conread position: 637-767
Cow position: chr20:5061295-5061424 (view UCSC Genome Browser custom track)
Alignm length: 132
Alignm identity: 100
Alignm E-value: 9e-21
Alignm gaps (pig, cow): 21, 103

Conread position: 640-761
Cow position: chr20:24310799-24310678 (view UCSC Genome Browser custom track)
Alignm length: 123
Alignm identity: 97
Alignm E-value: 1e-22
Alignm gaps (pig, cow): 18, 98

Conread position: 652-795
Cow position: chr20:23168478-23168624 (view UCSC Genome Browser custom track)
Alignm length: 149
Alignm identity: 113
Alignm E-value: 9e-21
Alignm gaps (pig, cow): 91, 6

Conread position: 654-759
Cow position: chr20:19623087-19622984 (view UCSC Genome Browser custom track)
Alignm length: 106
Alignm identity: 86
Alignm E-value: 9e-21
Alignm gaps (pig, cow): 13, 0

Conread position: 657-763
Cow position: chr20:18500690-18500796 (view UCSC Genome Browser custom track)
Alignm length: 107
Alignm identity: 87
Alignm E-value: 1e-22
Alignm gaps (pig, cow): 0, 0

Conread position: 664-771
Cow position: chr20:18408873-18408768 (view UCSC Genome Browser custom track)
Alignm length: 109
Alignm identity: 90
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 75, 33

Conread position: 670-760
Cow position: chr20:41386045-41386135 (view UCSC Genome Browser custom track)
Alignm length: 91
Alignm identity: 78
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 0, 0

Show alignments to all cow chromosomes.