Cow genome map

Conread name: Utr1-UTR01D050106

Conread position: 1-489
Cow position: chr29:961404-961880 (view UCSC Genome Browser custom track)
Alignm length: 494
Alignm identity: 364
Alignm E-value: 0
Alignm gaps (pig, cow): 376, 57

Conread position: 1-541
Cow position: chr29:27007603-27008127 (view UCSC Genome Browser custom track)
Alignm length: 546
Alignm identity: 367
Alignm E-value: 0
Alignm gaps (pig, cow): 156, 68

Conread position: 1-558
Cow position: chr29:13553619-13554165 (view UCSC Genome Browser custom track)
Alignm length: 573
Alignm identity: 403
Alignm E-value: 0
Alignm gaps (pig, cow): 130, 184

Conread position: 1-561
Cow position: chr29:11684479-11685032 (view UCSC Genome Browser custom track)
Alignm length: 572
Alignm identity: 412
Alignm E-value: 0
Alignm gaps (pig, cow): 183, 176

Conread position: 1-566
Cow position: chr29:38349651-38349097 (view UCSC Genome Browser custom track)
Alignm length: 570
Alignm identity: 387
Alignm E-value: 0
Alignm gaps (pig, cow): 21, 184

Conread position: 1-594
Cow position: chr29:3704704-3704140 (view UCSC Genome Browser custom track)
Alignm length: 598
Alignm identity: 424
Alignm E-value: 0
Alignm gaps (pig, cow): 424, 105

Conread position: 1-595
Cow position: chr29:18212520-18211939 (view UCSC Genome Browser custom track)
Alignm length: 618
Alignm identity: 442
Alignm E-value: 0
Alignm gaps (pig, cow): 77, 189

Conread position: 1-597
Cow position: chr29:13616176-13615588 (view UCSC Genome Browser custom track)
Alignm length: 612
Alignm identity: 439
Alignm E-value: 0
Alignm gaps (pig, cow): 202, 110

Conread position: 1-598
Cow position: chr29:13639872-13639304 (view UCSC Genome Browser custom track)
Alignm length: 602
Alignm identity: 428
Alignm E-value: 0
Alignm gaps (pig, cow): 455, 44

Conread position: 1-598
Cow position: chr29:17408815-17409397 (view UCSC Genome Browser custom track)
Alignm length: 604
Alignm identity: 447
Alignm E-value: 0
Alignm gaps (pig, cow): 121, 8

Conread position: 1-598
Cow position: chr29:39567165-39567744 (view UCSC Genome Browser custom track)
Alignm length: 601
Alignm identity: 440
Alignm E-value: 0
Alignm gaps (pig, cow): 19, 97

Conread position: 1-599
Cow position: chr29:9911634-9912239 (view UCSC Genome Browser custom track)
Alignm length: 623
Alignm identity: 429
Alignm E-value: 0
Alignm gaps (pig, cow): 109, 99

Conread position: 1-599
Cow position: chr29:26263332-26263899 (view UCSC Genome Browser custom track)
Alignm length: 605
Alignm identity: 437
Alignm E-value: 0
Alignm gaps (pig, cow): 137, 92

Conread position: 1-632
Cow position: chr29:6925496-6926101 (view UCSC Genome Browser custom track)
Alignm length: 638
Alignm identity: 461
Alignm E-value: 0
Alignm gaps (pig, cow): 184, 191

Conread position: 1-728
Cow position: chr29:20933191-20933902 (view UCSC Genome Browser custom track)
Alignm length: 742
Alignm identity: 503
Alignm E-value: 0
Alignm gaps (pig, cow): 374, 77

Conread position: 1-730
Cow position: chr29:21443868-21443152 (view UCSC Genome Browser custom track)
Alignm length: 738
Alignm identity: 532
Alignm E-value: 0
Alignm gaps (pig, cow): 147, 187

Conread position: 1-736
Cow position: chr29:34746176-34745466 (view UCSC Genome Browser custom track)
Alignm length: 744
Alignm identity: 529
Alignm E-value: 0
Alignm gaps (pig, cow): 347, 183

Conread position: 1-743
Cow position: chr29:26778368-26779078 (view UCSC Genome Browser custom track)
Alignm length: 753
Alignm identity: 512
Alignm E-value: 0
Alignm gaps (pig, cow): 71, 52

Conread position: 1-749
Cow position: chr29:35434348-35435066 (view UCSC Genome Browser custom track)
Alignm length: 753
Alignm identity: 531
Alignm E-value: 0
Alignm gaps (pig, cow): 376, 191

Conread position: 1-754
Cow position: chr29:28775977-28775258 (view UCSC Genome Browser custom track)
Alignm length: 766
Alignm identity: 530
Alignm E-value: 0
Alignm gaps (pig, cow): 82, 46

Conread position: 1-757
Cow position: chr29:35291585-35292302 (view UCSC Genome Browser custom track)
Alignm length: 760
Alignm identity: 563
Alignm E-value: 0
Alignm gaps (pig, cow): 504, 71

Conread position: 1-763
Cow position: chr29:15738867-15738128 (view UCSC Genome Browser custom track)
Alignm length: 772
Alignm identity: 538
Alignm E-value: 0
Alignm gaps (pig, cow): 86, 112

Conread position: 1-763
Cow position: chr29:16609219-16609972 (view UCSC Genome Browser custom track)
Alignm length: 774
Alignm identity: 551
Alignm E-value: 0
Alignm gaps (pig, cow): 369, 76

Conread position: 2-739
Cow position: chr29:40096444-40097179 (view UCSC Genome Browser custom track)
Alignm length: 762
Alignm identity: 552
Alignm E-value: 0
Alignm gaps (pig, cow): 372, 182

Conread position: 2-765
Cow position: chr29:4120332-4121081 (view UCSC Genome Browser custom track)
Alignm length: 776
Alignm identity: 557
Alignm E-value: 0
Alignm gaps (pig, cow): 417, 176

Conread position: 2-800
Cow position: chr29:36530342-36531119 (view UCSC Genome Browser custom track)
Alignm length: 807
Alignm identity: 557
Alignm E-value: 0
Alignm gaps (pig, cow): 20, 127

Conread position: 5-491
Cow position: chr29:29477535-29477076 (view UCSC Genome Browser custom track)
Alignm length: 488
Alignm identity: 336
Alignm E-value: 0
Alignm gaps (pig, cow): 455, 64

Conread position: 5-526
Cow position: chr29:2415321-2414820 (view UCSC Genome Browser custom track)
Alignm length: 526
Alignm identity: 384
Alignm E-value: 0
Alignm gaps (pig, cow): 382, 18

Conread position: 5-598
Cow position: chr29:29512635-29512078 (view UCSC Genome Browser custom track)
Alignm length: 597
Alignm identity: 386
Alignm E-value: 9.99967e-42
Alignm gaps (pig, cow): 102, 13

Conread position: 5-734
Cow position: chr29:40117037-40117758 (view UCSC Genome Browser custom track)
Alignm length: 752
Alignm identity: 507
Alignm E-value: 0
Alignm gaps (pig, cow): 194, 48

Conread position: 5-739
Cow position: chr29:17109470-17110151 (view UCSC Genome Browser custom track)
Alignm length: 737
Alignm identity: 498
Alignm E-value: 0
Alignm gaps (pig, cow): 451, 66

Conread position: 5-745
Cow position: chr29:19761757-19762466 (view UCSC Genome Browser custom track)
Alignm length: 747
Alignm identity: 519
Alignm E-value: 0
Alignm gaps (pig, cow): 291, 176

Conread position: 5-764
Cow position: chr29:1021749-1022518 (view UCSC Genome Browser custom track)
Alignm length: 791
Alignm identity: 536
Alignm E-value: 0
Alignm gaps (pig, cow): 6, 175

Conread position: 5-768
Cow position: chr29:21933651-21932893 (view UCSC Genome Browser custom track)
Alignm length: 785
Alignm identity: 522
Alignm E-value: 0
Alignm gaps (pig, cow): 149, 190

Conread position: 6-743
Cow position: chr29:29056663-29057381 (view UCSC Genome Browser custom track)
Alignm length: 752
Alignm identity: 547
Alignm E-value: 0
Alignm gaps (pig, cow): 128, 47

Conread position: 6-746
Cow position: chr29:2744787-2744064 (view UCSC Genome Browser custom track)
Alignm length: 745
Alignm identity: 537
Alignm E-value: 0
Alignm gaps (pig, cow): 450, 65

Conread position: 7-598
Cow position: chr29:19338444-19339063 (view UCSC Genome Browser custom track)
Alignm length: 627
Alignm identity: 439
Alignm E-value: 0
Alignm gaps (pig, cow): 228, 172

Conread position: 13-750
Cow position: chr29:732124-732819 (view UCSC Genome Browser custom track)
Alignm length: 744
Alignm identity: 509
Alignm E-value: 0
Alignm gaps (pig, cow): 362, 39

Conread position: 14-764
Cow position: chr29:26334893-26334166 (view UCSC Genome Browser custom track)
Alignm length: 757
Alignm identity: 494
Alignm E-value: 0
Alignm gaps (pig, cow): 284, 25

Conread position: 16-556
Cow position: chr29:24345971-24345428 (view UCSC Genome Browser custom track)
Alignm length: 559
Alignm identity: 398
Alignm E-value: 0
Alignm gaps (pig, cow): 126, 25

Conread position: 16-602
Cow position: chr29:11365741-11366305 (view UCSC Genome Browser custom track)
Alignm length: 599
Alignm identity: 402
Alignm E-value: 0
Alignm gaps (pig, cow): 89, 61

Conread position: 16-739
Cow position: chr29:22935780-22936483 (view UCSC Genome Browser custom track)
Alignm length: 737
Alignm identity: 530
Alignm E-value: 0
Alignm gaps (pig, cow): 440, 168

Conread position: 17-710
Cow position: chr29:87518-86835 (view UCSC Genome Browser custom track)
Alignm length: 705
Alignm identity: 516
Alignm E-value: 0
Alignm gaps (pig, cow): 358, 87

Conread position: 18-599
Cow position: chr29:40338044-40337474 (view UCSC Genome Browser custom track)
Alignm length: 594
Alignm identity: 408
Alignm E-value: 0
Alignm gaps (pig, cow): 37, 94

Conread position: 20-745
Cow position: chr29:32800204-32799499 (view UCSC Genome Browser custom track)
Alignm length: 738
Alignm identity: 533
Alignm E-value: 0
Alignm gaps (pig, cow): 245, 15

Conread position: 23-759
Cow position: chr29:465898-465177 (view UCSC Genome Browser custom track)
Alignm length: 752
Alignm identity: 534
Alignm E-value: 0
Alignm gaps (pig, cow): 306, 18

Conread position: 34-503
Cow position: chr29:29547772-29548210 (view UCSC Genome Browser custom track)
Alignm length: 472
Alignm identity: 303
Alignm E-value: 3e-31
Alignm gaps (pig, cow): 120, 51

Conread position: 41-776
Cow position: chr29:42771197-42771888 (view UCSC Genome Browser custom track)
Alignm length: 745
Alignm identity: 484
Alignm E-value: 0
Alignm gaps (pig, cow): 416, 36

Conread position: 43-598
Cow position: chr29:9638792-9638258 (view UCSC Genome Browser custom track)
Alignm length: 558
Alignm identity: 411
Alignm E-value: 0
Alignm gaps (pig, cow): 256, 141

Conread position: 47-767
Cow position: chr29:1934036-1933345 (view UCSC Genome Browser custom track)
Alignm length: 727
Alignm identity: 506
Alignm E-value: 0
Alignm gaps (pig, cow): 197, 141

Conread position: 50-567
Cow position: chr29:12005238-12004731 (view UCSC Genome Browser custom track)
Alignm length: 526
Alignm identity: 394
Alignm E-value: 0
Alignm gaps (pig, cow): 133, 127

Conread position: 54-578
Cow position: chr29:17561-17065 (view UCSC Genome Browser custom track)
Alignm length: 529
Alignm identity: 383
Alignm E-value: 0
Alignm gaps (pig, cow): 300, 80

Conread position: 70-599
Cow position: chr29:43495617-43496102 (view UCSC Genome Browser custom track)
Alignm length: 530
Alignm identity: 371
Alignm E-value: 0
Alignm gaps (pig, cow): 118, 0

Conread position: 73-566
Cow position: chr29:6218010-6217524 (view UCSC Genome Browser custom track)
Alignm length: 508
Alignm identity: 357
Alignm E-value: 0
Alignm gaps (pig, cow): 65, 18

Conread position: 95-739
Cow position: chr29:35406213-35405592 (view UCSC Genome Browser custom track)
Alignm length: 648
Alignm identity: 440
Alignm E-value: 0
Alignm gaps (pig, cow): 361, 89

Conread position: 100-598
Cow position: chr29:40852489-40852990 (view UCSC Genome Browser custom track)
Alignm length: 516
Alignm identity: 333
Alignm E-value: 2e-39
Alignm gaps (pig, cow): 74, 125

Conread position: 100-747
Cow position: chr29:26017933-26017294 (view UCSC Genome Browser custom track)
Alignm length: 665
Alignm identity: 472
Alignm E-value: 0
Alignm gaps (pig, cow): 275, 69

Conread position: 111-739
Cow position: chr29:20626175-20626768 (view UCSC Genome Browser custom track)
Alignm length: 632
Alignm identity: 436
Alignm E-value: 0
Alignm gaps (pig, cow): 58, 70

Conread position: 111-757
Cow position: chr29:35459170-35458554 (view UCSC Genome Browser custom track)
Alignm length: 657
Alignm identity: 447
Alignm E-value: 0
Alignm gaps (pig, cow): 345, 36

Conread position: 126-740
Cow position: chr29:11398323-11397714 (view UCSC Genome Browser custom track)
Alignm length: 635
Alignm identity: 429
Alignm E-value: 0
Alignm gaps (pig, cow): 153, 28

Conread position: 126-743
Cow position: chr29:35502043-35501463 (view UCSC Genome Browser custom track)
Alignm length: 621
Alignm identity: 443
Alignm E-value: 0
Alignm gaps (pig, cow): 27, 63

Conread position: 126-765
Cow position: chr29:20674205-20673583 (view UCSC Genome Browser custom track)
Alignm length: 648
Alignm identity: 458
Alignm E-value: 0
Alignm gaps (pig, cow): 167, 62

Conread position: 128-771
Cow position: chr29:29589309-29588694 (view UCSC Genome Browser custom track)
Alignm length: 653
Alignm identity: 438
Alignm E-value: 0
Alignm gaps (pig, cow): 214, 60

Conread position: 130-584
Cow position: chr29:31926685-31926241 (view UCSC Genome Browser custom track)
Alignm length: 459
Alignm identity: 339
Alignm E-value: 0
Alignm gaps (pig, cow): 12, 54

Conread position: 130-598
Cow position: chr29:28868237-28868705 (view UCSC Genome Browser custom track)
Alignm length: 480
Alignm identity: 344
Alignm E-value: 0
Alignm gaps (pig, cow): 12, 55

Conread position: 136-599
Cow position: chr29:4367349-4367789 (view UCSC Genome Browser custom track)
Alignm length: 469
Alignm identity: 321
Alignm E-value: 0
Alignm gaps (pig, cow): 6, 46

Conread position: 147-597
Cow position: chr29:856779-856341 (view UCSC Genome Browser custom track)
Alignm length: 462
Alignm identity: 302
Alignm E-value: 2e-35
Alignm gaps (pig, cow): 314, 37

Conread position: 148-477
Cow position: chr29:26519834-26519517 (view UCSC Genome Browser custom track)
Alignm length: 335
Alignm identity: 249
Alignm E-value: 0
Alignm gaps (pig, cow): 264, 44

Conread position: 149-739
Cow position: chr29:28195893-28195335 (view UCSC Genome Browser custom track)
Alignm length: 597
Alignm identity: 425
Alignm E-value: 0
Alignm gaps (pig, cow): 33, 57

Conread position: 150-763
Cow position: chr29:23874084-23874684 (view UCSC Genome Browser custom track)
Alignm length: 622
Alignm identity: 454
Alignm E-value: 0
Alignm gaps (pig, cow): 146, 34

Conread position: 181-538
Cow position: chr29:12798588-12798923 (view UCSC Genome Browser custom track)
Alignm length: 359
Alignm identity: 258
Alignm E-value: 0
Alignm gaps (pig, cow): 275, 24

Conread position: 189-748
Cow position: chr29:35630749-35630204 (view UCSC Genome Browser custom track)
Alignm length: 576
Alignm identity: 399
Alignm E-value: 0
Alignm gaps (pig, cow): 107, 12

Conread position: 198-508
Cow position: chr29:20178460-20178157 (view UCSC Genome Browser custom track)
Alignm length: 315
Alignm identity: 241
Alignm E-value: 0
Alignm gaps (pig, cow): 70, 104

Conread position: 202-489
Cow position: chr29:36037386-36037658 (view UCSC Genome Browser custom track)
Alignm length: 290
Alignm identity: 211
Alignm E-value: 9.99967e-42
Alignm gaps (pig, cow): 221, 63

Conread position: 202-539
Cow position: chr29:9686335-9685995 (view UCSC Genome Browser custom track)
Alignm length: 347
Alignm identity: 256
Alignm E-value: 0
Alignm gaps (pig, cow): 62, 103

Conread position: 202-743
Cow position: chr29:9709373-9709895 (view UCSC Genome Browser custom track)
Alignm length: 548
Alignm identity: 379
Alignm E-value: 0
Alignm gaps (pig, cow): 153, 63

Conread position: 202-745
Cow position: chr29:40892040-40891503 (view UCSC Genome Browser custom track)
Alignm length: 560
Alignm identity: 390
Alignm E-value: 0
Alignm gaps (pig, cow): 72, 105

Conread position: 208-575
Cow position: chr29:32521543-32521913 (view UCSC Genome Browser custom track)
Alignm length: 378
Alignm identity: 270
Alignm E-value: 0
Alignm gaps (pig, cow): 55, 98

Conread position: 208-763
Cow position: chr29:16657371-16657908 (view UCSC Genome Browser custom track)
Alignm length: 568
Alignm identity: 399
Alignm E-value: 0
Alignm gaps (pig, cow): 28, 34

Conread position: 210-597
Cow position: chr29:2071886-2071510 (view UCSC Genome Browser custom track)
Alignm length: 390
Alignm identity: 290
Alignm E-value: 0
Alignm gaps (pig, cow): 252, 55

Conread position: 210-671
Cow position: chr29:6293782-6293340 (view UCSC Genome Browser custom track)
Alignm length: 469
Alignm identity: 345
Alignm E-value: 0
Alignm gaps (pig, cow): 26, 32

Conread position: 210-739
Cow position: chr29:5892532-5893044 (view UCSC Genome Browser custom track)
Alignm length: 540
Alignm identity: 369
Alignm E-value: 0
Alignm gaps (pig, cow): 165, 42

Conread position: 219-489
Cow position: chr29:44310337-44310070 (view UCSC Genome Browser custom track)
Alignm length: 273
Alignm identity: 190
Alignm E-value: 2e-36
Alignm gaps (pig, cow): 204, 44

Conread position: 223-645
Cow position: chr29:2644613-2644183 (view UCSC Genome Browser custom track)
Alignm length: 439
Alignm identity: 270
Alignm E-value: 0
Alignm gaps (pig, cow): 52, 31

Conread position: 223-740
Cow position: chr29:14112070-14112578 (view UCSC Genome Browser custom track)
Alignm length: 533
Alignm identity: 351
Alignm E-value: 3.00004e-41
Alignm gaps (pig, cow): 77, 30

Conread position: 232-598
Cow position: chr29:45589881-45589526 (view UCSC Genome Browser custom track)
Alignm length: 372
Alignm identity: 255
Alignm E-value: 3.00004e-41
Alignm gaps (pig, cow): 187, 43

Conread position: 238-736
Cow position: chr29:6844919-6844415 (view UCSC Genome Browser custom track)
Alignm length: 519
Alignm identity: 376
Alignm E-value: 0
Alignm gaps (pig, cow): 185, 27

Conread position: 238-743
Cow position: chr29:40299306-40298795 (view UCSC Genome Browser custom track)
Alignm length: 525
Alignm identity: 358
Alignm E-value: 0
Alignm gaps (pig, cow): 28, 76

Conread position: 241-746
Cow position: chr29:750185-749687 (view UCSC Genome Browser custom track)
Alignm length: 520
Alignm identity: 354
Alignm E-value: 0
Alignm gaps (pig, cow): 183, 24

Conread position: 244-551
Cow position: chr29:3502775-3503071 (view UCSC Genome Browser custom track)
Alignm length: 311
Alignm identity: 222
Alignm E-value: 1.00053e-42
Alignm gaps (pig, cow): 212, 56

Conread position: 245-579
Cow position: chr29:699892-699572 (view UCSC Genome Browser custom track)
Alignm length: 338
Alignm identity: 248
Alignm E-value: 0
Alignm gaps (pig, cow): 178, 20

Conread position: 250-596
Cow position: chr29:40165962-40166304 (view UCSC Genome Browser custom track)
Alignm length: 356
Alignm identity: 256
Alignm E-value: 0
Alignm gaps (pig, cow): 49, 56

Conread position: 253-462
Cow position: chr29:5099040-5098831 (view UCSC Genome Browser custom track)
Alignm length: 214
Alignm identity: 159
Alignm E-value: 1e-33
Alignm gaps (pig, cow): 7, 47

Conread position: 253-599
Cow position: chr29:24604425-24604073 (view UCSC Genome Browser custom track)
Alignm length: 359
Alignm identity: 245
Alignm E-value: 3e-40
Alignm gaps (pig, cow): 122, 46

Conread position: 253-767
Cow position: chr29:2263302-2262757 (view UCSC Genome Browser custom track)
Alignm length: 557
Alignm identity: 387
Alignm E-value: 0
Alignm gaps (pig, cow): 124, 6

Conread position: 256-760
Cow position: chr29:23844545-23845057 (view UCSC Genome Browser custom track)
Alignm length: 529
Alignm identity: 365
Alignm E-value: 0
Alignm gaps (pig, cow): 38, 9

Conread position: 259-561
Cow position: chr29:2522307-2522590 (view UCSC Genome Browser custom track)
Alignm length: 303
Alignm identity: 219
Alignm E-value: 3e-40
Alignm gaps (pig, cow): 40, 0

Conread position: 259-740
Cow position: chr29:31928710-31929185 (view UCSC Genome Browser custom track)
Alignm length: 492
Alignm identity: 356
Alignm E-value: 0
Alignm gaps (pig, cow): 91, 14

Conread position: 260-559
Cow position: chr29:94815-94534 (view UCSC Genome Browser custom track)
Alignm length: 300
Alignm identity: 222
Alignm E-value: 0
Alignm gaps (pig, cow): 39, 0

Conread position: 260-743
Cow position: chr29:12679886-12680360 (view UCSC Genome Browser custom track)
Alignm length: 492
Alignm identity: 339
Alignm E-value: 0
Alignm gaps (pig, cow): 111, 17

Conread position: 260-760
Cow position: chr29:22175423-22175910 (view UCSC Genome Browser custom track)
Alignm length: 517
Alignm identity: 367
Alignm E-value: 0
Alignm gaps (pig, cow): 100, 39

Conread position: 262-490
Cow position: chr29:4065820-4066043 (view UCSC Genome Browser custom track)
Alignm length: 231
Alignm identity: 175
Alignm E-value: 3e-40
Alignm gaps (pig, cow): 21, 26

Conread position: 262-599
Cow position: chr29:356058-356384 (view UCSC Genome Browser custom track)
Alignm length: 338
Alignm identity: 244
Alignm E-value: 0
Alignm gaps (pig, cow): 37, 0

Conread position: 262-758
Cow position: chr29:25333721-25333222 (view UCSC Genome Browser custom track)
Alignm length: 518
Alignm identity: 350
Alignm E-value: 0
Alignm gaps (pig, cow): 99, 43

Conread position: 263-615
Cow position: chr29:41747177-41747525 (view UCSC Genome Browser custom track)
Alignm length: 360
Alignm identity: 255
Alignm E-value: 0
Alignm gaps (pig, cow): 144, 22

Conread position: 264-744
Cow position: chr29:23697711-23698173 (view UCSC Genome Browser custom track)
Alignm length: 486
Alignm identity: 332
Alignm E-value: 0
Alignm gaps (pig, cow): 21, 11

Conread position: 264-764
Cow position: chr29:41530584-41531074 (view UCSC Genome Browser custom track)
Alignm length: 502
Alignm identity: 353
Alignm E-value: 0
Alignm gaps (pig, cow): 192, 38

Conread position: 265-598
Cow position: chr29:2984622-2984952 (view UCSC Genome Browser custom track)
Alignm length: 337
Alignm identity: 251
Alignm E-value: 0
Alignm gaps (pig, cow): 148, 34

Conread position: 266-758
Cow position: chr29:29769610-29769135 (view UCSC Genome Browser custom track)
Alignm length: 496
Alignm identity: 352
Alignm E-value: 0
Alignm gaps (pig, cow): 190, 33

Conread position: 266-768
Cow position: chr29:22069013-22068518 (view UCSC Genome Browser custom track)
Alignm length: 513
Alignm identity: 357
Alignm E-value: 0
Alignm gaps (pig, cow): 9, 46

Conread position: 270-758
Cow position: chr29:22613175-22613636 (view UCSC Genome Browser custom track)
Alignm length: 491
Alignm identity: 325
Alignm E-value: 5.60519e-45
Alignm gaps (pig, cow): 186, 27

Conread position: 272-769
Cow position: chr29:23113421-23113921 (view UCSC Genome Browser custom track)
Alignm length: 515
Alignm identity: 323
Alignm E-value: 3e-29
Alignm gaps (pig, cow): 115, 30

Conread position: 273-736
Cow position: chr29:17222151-17222611 (view UCSC Genome Browser custom track)
Alignm length: 475
Alignm identity: 342
Alignm E-value: 0
Alignm gaps (pig, cow): 21, 33

Conread position: 274-494
Cow position: chr29:4804977-4805193 (view UCSC Genome Browser custom track)
Alignm length: 221
Alignm identity: 170
Alignm E-value: 9.80909e-45
Alignm gaps (pig, cow): 25, 0

Conread position: 274-513
Cow position: chr29:4194377-4194136 (view UCSC Genome Browser custom track)
Alignm length: 247
Alignm identity: 189
Alignm E-value: 3.9937e-43
Alignm gaps (pig, cow): 103, 17

Conread position: 274-542
Cow position: chr29:16756799-16757061 (view UCSC Genome Browser custom track)
Alignm length: 274
Alignm identity: 206
Alignm E-value: 5.60519e-45
Alignm gaps (pig, cow): 101, 28

Conread position: 274-598
Cow position: chr29:37599460-37599154 (view UCSC Genome Browser custom track)
Alignm length: 326
Alignm identity: 237
Alignm E-value: 0
Alignm gaps (pig, cow): 180, 28

Conread position: 274-599
Cow position: chr29:18021931-18021620 (view UCSC Genome Browser custom track)
Alignm length: 327
Alignm identity: 227
Alignm E-value: 7e-39
Alignm gaps (pig, cow): 132, 23

Conread position: 274-617
Cow position: chr29:9139152-9139502 (view UCSC Genome Browser custom track)
Alignm length: 354
Alignm identity: 258
Alignm E-value: 0
Alignm gaps (pig, cow): 112, 25

Conread position: 274-720
Cow position: chr29:19389230-19389659 (view UCSC Genome Browser custom track)
Alignm length: 450
Alignm identity: 304
Alignm E-value: 0
Alignm gaps (pig, cow): 149, 25

Conread position: 274-743
Cow position: chr29:12784211-12783758 (view UCSC Genome Browser custom track)
Alignm length: 476
Alignm identity: 342
Alignm E-value: 0
Alignm gaps (pig, cow): 182, 25

Conread position: 274-744
Cow position: chr29:2623736-2623277 (view UCSC Genome Browser custom track)
Alignm length: 477
Alignm identity: 318
Alignm E-value: 0
Alignm gaps (pig, cow): 103, 15

Conread position: 274-750
Cow position: chr29:8926715-8926242 (view UCSC Genome Browser custom track)
Alignm length: 493
Alignm identity: 332
Alignm E-value: 1.4013e-45
Alignm gaps (pig, cow): 91, 25

Conread position: 274-757
Cow position: chr29:27668898-27668439 (view UCSC Genome Browser custom track)
Alignm length: 489
Alignm identity: 325
Alignm E-value: 1.00053e-42
Alignm gaps (pig, cow): 185, 27

Conread position: 274-762
Cow position: chr29:3237615-3237127 (view UCSC Genome Browser custom track)
Alignm length: 503
Alignm identity: 335
Alignm E-value: 0
Alignm gaps (pig, cow): 19, 30

Conread position: 274-764
Cow position: chr29:29475503-29475031 (view UCSC Genome Browser custom track)
Alignm length: 493
Alignm identity: 323
Alignm E-value: 0
Alignm gaps (pig, cow): 24, 39

Conread position: 274-768
Cow position: chr29:34297821-34297344 (view UCSC Genome Browser custom track)
Alignm length: 499
Alignm identity: 347
Alignm E-value: 0
Alignm gaps (pig, cow): 183, 25

Conread position: 276-673
Cow position: chr29:26654294-26653898 (view UCSC Genome Browser custom track)
Alignm length: 414
Alignm identity: 274
Alignm E-value: 3e-30
Alignm gaps (pig, cow): 99, 11

Conread position: 278-454
Cow position: chr29:13458810-13458979 (view UCSC Genome Browser custom track)
Alignm length: 177
Alignm identity: 141
Alignm E-value: 5e-36
Alignm gaps (pig, cow): 11, 0

Conread position: 278-746
Cow position: chr29:13028205-13028654 (view UCSC Genome Browser custom track)
Alignm length: 480
Alignm identity: 324
Alignm E-value: 3.00018e-42
Alignm gaps (pig, cow): 178, 21

Conread position: 279-742
Cow position: chr29:11562363-11562827 (view UCSC Genome Browser custom track)
Alignm length: 478
Alignm identity: 320
Alignm E-value: 0
Alignm gaps (pig, cow): 98, 20

Conread position: 280-766
Cow position: chr29:11915567-11916048 (view UCSC Genome Browser custom track)
Alignm length: 500
Alignm identity: 331
Alignm E-value: 4.06377e-44
Alignm gaps (pig, cow): 95, 7

Conread position: 282-475
Cow position: chr29:10659595-10659396 (view UCSC Genome Browser custom track)
Alignm length: 203
Alignm identity: 155
Alignm E-value: 4e-33
Alignm gaps (pig, cow): 61, 7

Conread position: 283-600
Cow position: chr29:36183029-36183346 (view UCSC Genome Browser custom track)
Alignm length: 326
Alignm identity: 238
Alignm E-value: 0
Alignm gaps (pig, cow): 94, 19

Conread position: 283-741
Cow position: chr29:44378665-44378208 (view UCSC Genome Browser custom track)
Alignm length: 471
Alignm identity: 319
Alignm E-value: 0
Alignm gaps (pig, cow): 124, 19

Conread position: 287-491
Cow position: chr29:32767764-32767565 (view UCSC Genome Browser custom track)
Alignm length: 206
Alignm identity: 153
Alignm E-value: 1e-32
Alignm gaps (pig, cow): 169, 12

Conread position: 288-747
Cow position: chr29:25474665-25475137 (view UCSC Genome Browser custom track)
Alignm length: 481
Alignm identity: 338
Alignm E-value: 0
Alignm gaps (pig, cow): 87, 11

Conread position: 289-579
Cow position: chr29:24119978-24119697 (view UCSC Genome Browser custom track)
Alignm length: 294
Alignm identity: 219
Alignm E-value: 0
Alignm gaps (pig, cow): 86, 10

Conread position: 290-758
Cow position: chr29:34744859-34744413 (view UCSC Genome Browser custom track)
Alignm length: 472
Alignm identity: 333
Alignm E-value: 0
Alignm gaps (pig, cow): 79, 84

Conread position: 293-723
Cow position: chr29:19254062-19253647 (view UCSC Genome Browser custom track)
Alignm length: 434
Alignm identity: 290
Alignm E-value: 1.4013e-45
Alignm gaps (pig, cow): 130, 199

Conread position: 293-740
Cow position: chr29:24292636-24293069 (view UCSC Genome Browser custom track)
Alignm length: 454
Alignm identity: 311
Alignm E-value: 0
Alignm gaps (pig, cow): 15, 46

Conread position: 293-758
Cow position: chr29:4520096-4520546 (view UCSC Genome Browser custom track)
Alignm length: 469
Alignm identity: 344
Alignm E-value: 0
Alignm gaps (pig, cow): 163, 128

Conread position: 295-598
Cow position: chr29:39023575-39023277 (view UCSC Genome Browser custom track)
Alignm length: 315
Alignm identity: 214
Alignm E-value: 2e-24
Alignm gaps (pig, cow): 148, 86

Conread position: 295-678
Cow position: chr29:16309513-16309887 (view UCSC Genome Browser custom track)
Alignm length: 387
Alignm identity: 260
Alignm E-value: 3.9937e-43
Alignm gaps (pig, cow): 161, 68

Conread position: 295-689
Cow position: chr29:7966010-7966393 (view UCSC Genome Browser custom track)
Alignm length: 399
Alignm identity: 270
Alignm E-value: 1.00053e-42
Alignm gaps (pig, cow): 80, 7

Conread position: 296-739
Cow position: chr29:11704886-11705331 (view UCSC Genome Browser custom track)
Alignm length: 459
Alignm identity: 311
Alignm E-value: 0
Alignm gaps (pig, cow): 78, 128

Conread position: 296-746
Cow position: chr29:3711151-3711581 (view UCSC Genome Browser custom track)
Alignm length: 455
Alignm identity: 327
Alignm E-value: 0
Alignm gaps (pig, cow): 116, 14

Conread position: 296-766
Cow position: chr29:19949073-19949528 (view UCSC Genome Browser custom track)
Alignm length: 483
Alignm identity: 329
Alignm E-value: 1.4013e-45
Alignm gaps (pig, cow): 81, 124

Conread position: 299-560
Cow position: chr29:42886147-42886415 (view UCSC Genome Browser custom track)
Alignm length: 272
Alignm identity: 200
Alignm E-value: 3.00004e-41
Alignm gaps (pig, cow): 61, 118

Conread position: 300-597
Cow position: chr29:868540-868836 (view UCSC Genome Browser custom track)
Alignm length: 301
Alignm identity: 220
Alignm E-value: 0
Alignm gaps (pig, cow): 74, 88

Conread position: 302-564
Cow position: chr29:39642946-39643204 (view UCSC Genome Browser custom track)
Alignm length: 264
Alignm identity: 200
Alignm E-value: 0
Alignm gaps (pig, cow): 154, 66

Conread position: 304-597
Cow position: chr29:19821068-19821344 (view UCSC Genome Browser custom track)
Alignm length: 295
Alignm identity: 205
Alignm E-value: 4e-32
Alignm gaps (pig, cow): 152, 69

Conread position: 307-561
Cow position: chr29:2532836-2533084 (view UCSC Genome Browser custom track)
Alignm length: 259
Alignm identity: 192
Alignm E-value: 3.00004e-41
Alignm gaps (pig, cow): 77, 118

Conread position: 310-550
Cow position: chr29:5677562-5677803 (view UCSC Genome Browser custom track)
Alignm length: 247
Alignm identity: 177
Alignm E-value: 4e-32
Alignm gaps (pig, cow): 55, 147

Conread position: 312-598
Cow position: chr29:463874-463592 (view UCSC Genome Browser custom track)
Alignm length: 289
Alignm identity: 208
Alignm E-value: 1.4013e-45
Alignm gaps (pig, cow): 194, 140

Conread position: 315-767
Cow position: chr29:35677762-35677315 (view UCSC Genome Browser custom track)
Alignm length: 460
Alignm identity: 324
Alignm E-value: 0
Alignm gaps (pig, cow): 108, 71

Conread position: 316-739
Cow position: chr29:31489103-31489522 (view UCSC Genome Browser custom track)
Alignm length: 431
Alignm identity: 305
Alignm E-value: 0
Alignm gaps (pig, cow): 39, 109

Conread position: 317-577
Cow position: chr29:14484761-14484496 (view UCSC Genome Browser custom track)
Alignm length: 268
Alignm identity: 204
Alignm E-value: 0
Alignm gaps (pig, cow): 139, 194

Conread position: 318-737
Cow position: chr29:30440711-30441135 (view UCSC Genome Browser custom track)
Alignm length: 435
Alignm identity: 312
Alignm E-value: 0
Alignm gaps (pig, cow): 57, 46

Conread position: 319-740
Cow position: chr29:22778395-22777982 (view UCSC Genome Browser custom track)
Alignm length: 429
Alignm identity: 302
Alignm E-value: 0
Alignm gaps (pig, cow): 56, 107

Conread position: 320-645
Cow position: chr29:6337450-6337779 (view UCSC Genome Browser custom track)
Alignm length: 334
Alignm identity: 240
Alignm E-value: 0
Alignm gaps (pig, cow): 136, 64

Conread position: 320-744
Cow position: chr29:38580763-38581195 (view UCSC Genome Browser custom track)
Alignm length: 438
Alignm identity: 293
Alignm E-value: 1.4013e-45
Alignm gaps (pig, cow): 45, 90

Conread position: 324-599
Cow position: chr29:709331-709070 (view UCSC Genome Browser custom track)
Alignm length: 279
Alignm identity: 189
Alignm E-value: 1e-22
Alignm gaps (pig, cow): 38, 119

Conread position: 325-722
Cow position: chr29:17154568-17154943 (view UCSC Genome Browser custom track)
Alignm length: 408
Alignm identity: 270
Alignm E-value: 2e-26
Alignm gaps (pig, cow): 131, 40

Conread position: 328-764
Cow position: chr29:22690015-22690452 (view UCSC Genome Browser custom track)
Alignm length: 446
Alignm identity: 294
Alignm E-value: 9.80909e-45
Alignm gaps (pig, cow): 47, 100

Conread position: 328-765
Cow position: chr29:26269864-26270289 (view UCSC Genome Browser custom track)
Alignm length: 442
Alignm identity: 295
Alignm E-value: 0
Alignm gaps (pig, cow): 95, 5

Conread position: 329-598
Cow position: chr29:41364906-41365171 (view UCSC Genome Browser custom track)
Alignm length: 272
Alignm identity: 207
Alignm E-value: 0
Alignm gaps (pig, cow): 36, 163

Conread position: 331-570
Cow position: chr29:44384402-44384159 (view UCSC Genome Browser custom track)
Alignm length: 247
Alignm identity: 168
Alignm E-value: 2e-24
Alignm gaps (pig, cow): 39, 118

Conread position: 333-598
Cow position: chr29:3100461-3100205 (view UCSC Genome Browser custom track)
Alignm length: 271
Alignm identity: 198
Alignm E-value: 7e-38
Alignm gaps (pig, cow): 42, 93

Conread position: 333-705
Cow position: chr29:9718972-9718611 (view UCSC Genome Browser custom track)
Alignm length: 379
Alignm identity: 241
Alignm E-value: 4e-23
Alignm gaps (pig, cow): 39, 92

Conread position: 334-752
Cow position: chr29:377645-377226 (view UCSC Genome Browser custom track)
Alignm length: 428
Alignm identity: 275
Alignm E-value: 1e-34
Alignm gaps (pig, cow): 44, 112

Conread position: 335-570
Cow position: chr29:26042431-26042662 (view UCSC Genome Browser custom track)
Alignm length: 237
Alignm identity: 168
Alignm E-value: 1e-33
Alignm gaps (pig, cow): 84, 121

Conread position: 336-740
Cow position: chr29:28979676-28979317 (view UCSC Genome Browser custom track)
Alignm length: 406
Alignm identity: 280
Alignm E-value: 4e-33
Alignm gaps (pig, cow): 120, 55

Conread position: 340-768
Cow position: chr29:30188533-30188107 (view UCSC Genome Browser custom track)
Alignm length: 437
Alignm identity: 293
Alignm E-value: 0
Alignm gaps (pig, cow): 35, 48

Conread position: 342-743
Cow position: chr29:44988972-44988592 (view UCSC Genome Browser custom track)
Alignm length: 406
Alignm identity: 283
Alignm E-value: 5.60519e-45
Alignm gaps (pig, cow): 33, 82

Conread position: 343-766
Cow position: chr29:11646914-11647339 (view UCSC Genome Browser custom track)
Alignm length: 443
Alignm identity: 304
Alignm E-value: 9.94922e-44
Alignm gaps (pig, cow): 157, 41

Conread position: 344-598
Cow position: chr29:27652818-27652566 (view UCSC Genome Browser custom track)
Alignm length: 258
Alignm identity: 180
Alignm E-value: 4e-32
Alignm gaps (pig, cow): 51, 63

Conread position: 344-702
Cow position: chr29:4334539-4334903 (view UCSC Genome Browser custom track)
Alignm length: 373
Alignm identity: 258
Alignm E-value: 3.00004e-41
Alignm gaps (pig, cow): 112, 78

Conread position: 346-561
Cow position: chr29:3539107-3538881 (view UCSC Genome Browser custom track)
Alignm length: 228
Alignm identity: 165
Alignm E-value: 3e-30
Alignm gaps (pig, cow): 66, 154

Conread position: 350-728
Cow position: chr29:33548400-33548012 (view UCSC Genome Browser custom track)
Alignm length: 398
Alignm identity: 265
Alignm E-value: 3e-29
Alignm gaps (pig, cow): 67, 36

Conread position: 350-749
Cow position: chr29:37618123-37618516 (view UCSC Genome Browser custom track)
Alignm length: 407
Alignm identity: 289
Alignm E-value: 0
Alignm gaps (pig, cow): 28, 74

Conread position: 350-771
Cow position: chr29:20910883-20910459 (view UCSC Genome Browser custom track)
Alignm length: 432
Alignm identity: 294
Alignm E-value: 0
Alignm gaps (pig, cow): 25, 147

Conread position: 354-541
Cow position: chr29:40615700-40615516 (view UCSC Genome Browser custom track)
Alignm length: 190
Alignm identity: 137
Alignm E-value: 5e-25
Alignm gaps (pig, cow): 102, 28

Conread position: 354-591
Cow position: chr29:17301351-17301589 (view UCSC Genome Browser custom track)
Alignm length: 242
Alignm identity: 168
Alignm E-value: 3e-29
Alignm gaps (pig, cow): 8, 32

Conread position: 354-740
Cow position: chr29:26275440-26275800 (view UCSC Genome Browser custom track)
Alignm length: 389
Alignm identity: 251
Alignm E-value: 3e-21
Alignm gaps (pig, cow): 104, 15

Conread position: 354-750
Cow position: chr29:43099919-43099540 (view UCSC Genome Browser custom track)
Alignm length: 398
Alignm identity: 253
Alignm E-value: 2e-26
Alignm gaps (pig, cow): 102, 8

Conread position: 356-709
Cow position: chr29:12900728-12900382 (view UCSC Genome Browser custom track)
Alignm length: 357
Alignm identity: 230
Alignm E-value: 3e-31
Alignm gaps (pig, cow): 22, 140

Conread position: 359-772
Cow position: chr29:24252065-24252500 (view UCSC Genome Browser custom track)
Alignm length: 445
Alignm identity: 300
Alignm E-value: 5e-36
Alignm gaps (pig, cow): 97, 62

Conread position: 360-598
Cow position: chr29:35442634-35442400 (view UCSC Genome Browser custom track)
Alignm length: 241
Alignm identity: 167
Alignm E-value: 7e-28
Alignm gaps (pig, cow): 83, 62

Conread position: 360-744
Cow position: chr29:25091940-25092308 (view UCSC Genome Browser custom track)
Alignm length: 388
Alignm identity: 253
Alignm E-value: 1e-30
Alignm gaps (pig, cow): 96, 61

Conread position: 367-741
Cow position: chr29:23389727-23389366 (view UCSC Genome Browser custom track)
Alignm length: 382
Alignm identity: 253
Alignm E-value: 3e-30
Alignm gaps (pig, cow): 28, 36

Conread position: 368-541
Cow position: chr29:25432239-25432405 (view UCSC Genome Browser custom track)
Alignm length: 175
Alignm identity: 134
Alignm E-value: 2e-28
Alignm gaps (pig, cow): 168, 55

Conread position: 368-743
Cow position: chr29:17296967-17297340 (view UCSC Genome Browser custom track)
Alignm length: 382
Alignm identity: 278
Alignm E-value: 0
Alignm gaps (pig, cow): 55, 124

Conread position: 368-746
Cow position: chr29:4085155-4085501 (view UCSC Genome Browser custom track)
Alignm length: 379
Alignm identity: 260
Alignm E-value: 2e-37
Alignm gaps (pig, cow): 82, 0

Conread position: 368-758
Cow position: chr29:29942897-29942508 (view UCSC Genome Browser custom track)
Alignm length: 396
Alignm identity: 262
Alignm E-value: 3.00004e-41
Alignm gaps (pig, cow): 55, 141

Conread position: 373-760
Cow position: chr29:31674471-31674850 (view UCSC Genome Browser custom track)
Alignm length: 391
Alignm identity: 253
Alignm E-value: 5e-35
Alignm gaps (pig, cow): 83, 48

Conread position: 373-796
Cow position: chr29:5409306-5408891 (view UCSC Genome Browser custom track)
Alignm length: 433
Alignm identity: 291
Alignm E-value: 3.9937e-43
Alignm gaps (pig, cow): 39, 115

Conread position: 374-678
Cow position: chr29:12025629-12025312 (view UCSC Genome Browser custom track)
Alignm length: 321
Alignm identity: 235
Alignm E-value: 0
Alignm gaps (pig, cow): 82, 49

Conread position: 374-740
Cow position: chr29:2055902-2056259 (view UCSC Genome Browser custom track)
Alignm length: 373
Alignm identity: 258
Alignm E-value: 3.9937e-43
Alignm gaps (pig, cow): 82, 17

Conread position: 379-597
Cow position: chr29:10018421-10018640 (view UCSC Genome Browser custom track)
Alignm length: 222
Alignm identity: 167
Alignm E-value: 2e-39
Alignm gaps (pig, cow): 44, 67

Conread position: 379-747
Cow position: chr29:29551700-29552053 (view UCSC Genome Browser custom track)
Alignm length: 373
Alignm identity: 245
Alignm E-value: 2e-28
Alignm gaps (pig, cow): 77, 11

Conread position: 381-538
Cow position: chr29:26411909-26411755 (view UCSC Genome Browser custom track)
Alignm length: 159
Alignm identity: 117
Alignm E-value: 4e-22
Alignm gaps (pig, cow): 75, 40

Conread position: 382-598
Cow position: chr29:9455204-9454996 (view UCSC Genome Browser custom track)
Alignm length: 219
Alignm identity: 157
Alignm E-value: 2e-27
Alignm gaps (pig, cow): 41, 70

Conread position: 385-740
Cow position: chr29:35084370-35084024 (view UCSC Genome Browser custom track)
Alignm length: 360
Alignm identity: 240
Alignm E-value: 5e-35
Alignm gaps (pig, cow): 71, 37

Conread position: 386-745
Cow position: chr29:36220382-36220747 (view UCSC Genome Browser custom track)
Alignm length: 370
Alignm identity: 252
Alignm E-value: 3.9937e-43
Alignm gaps (pig, cow): 105, 5

Conread position: 387-589
Cow position: chr29:44008927-44008727 (view UCSC Genome Browser custom track)
Alignm length: 204
Alignm identity: 148
Alignm E-value: 1e-30
Alignm gaps (pig, cow): 69, 35

Conread position: 387-598
Cow position: chr29:29795533-29795320 (view UCSC Genome Browser custom track)
Alignm length: 214
Alignm identity: 149
Alignm E-value: 8e-29
Alignm gaps (pig, cow): 36, 0

Conread position: 388-598
Cow position: chr29:5275399-5275190 (view UCSC Genome Browser custom track)
Alignm length: 212
Alignm identity: 149
Alignm E-value: 8e-29
Alignm gaps (pig, cow): 35, 58

Conread position: 388-728
Cow position: chr29:24045846-24046185 (view UCSC Genome Browser custom track)
Alignm length: 345
Alignm identity: 220
Alignm E-value: 7e-28
Alignm gaps (pig, cow): 37, 107

Conread position: 397-598
Cow position: chr29:25284597-25284400 (view UCSC Genome Browser custom track)
Alignm length: 204
Alignm identity: 143
Alignm E-value: 1e-23
Alignm gaps (pig, cow): 26, 44

Conread position: 403-742
Cow position: chr29:20167289-20167624 (view UCSC Genome Browser custom track)
Alignm length: 348
Alignm identity: 227
Alignm E-value: 2e-25
Alignm gaps (pig, cow): 33, 92

Conread position: 407-598
Cow position: chr29:21941472-21941663 (view UCSC Genome Browser custom track)
Alignm length: 194
Alignm identity: 150
Alignm E-value: 2e-37
Alignm gaps (pig, cow): 49, 94

Conread position: 408-584
Cow position: chr29:25839568-25839748 (view UCSC Genome Browser custom track)
Alignm length: 182
Alignm identity: 131
Alignm E-value: 5e-24
Alignm gaps (pig, cow): 48, 107

Conread position: 409-739
Cow position: chr29:40995015-40994681 (view UCSC Genome Browser custom track)
Alignm length: 340
Alignm identity: 222
Alignm E-value: 2e-28
Alignm gaps (pig, cow): 54, 44

Conread position: 410-598
Cow position: chr29:12626103-12625914 (view UCSC Genome Browser custom track)
Alignm length: 190
Alignm identity: 134
Alignm E-value: 6e-27
Alignm gaps (pig, cow): 46, 0

Conread position: 412-598
Cow position: chr29:8176529-8176717 (view UCSC Genome Browser custom track)
Alignm length: 189
Alignm identity: 129
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 44, 0

Conread position: 412-599
Cow position: chr29:4444593-4444781 (view UCSC Genome Browser custom track)
Alignm length: 191
Alignm identity: 132
Alignm E-value: 3e-21
Alignm gaps (pig, cow): 44, 26

Conread position: 415-740
Cow position: chr29:30227392-30227081 (view UCSC Genome Browser custom track)
Alignm length: 329
Alignm identity: 219
Alignm E-value: 2e-27
Alignm gaps (pig, cow): 41, 79

Conread position: 416-747
Cow position: chr29:3825855-3826172 (view UCSC Genome Browser custom track)
Alignm length: 333
Alignm identity: 218
Alignm E-value: 2e-27
Alignm gaps (pig, cow): 240, 42

Conread position: 427-739
Cow position: chr29:5520612-5520286 (view UCSC Genome Browser custom track)
Alignm length: 334
Alignm identity: 228
Alignm E-value: 2e-28
Alignm gaps (pig, cow): 29, 217

Conread position: 427-742
Cow position: chr29:26477432-26477745 (view UCSC Genome Browser custom track)
Alignm length: 323
Alignm identity: 216
Alignm E-value: 9e-30
Alignm gaps (pig, cow): 29, 64

Conread position: 432-763
Cow position: chr29:13373197-13373543 (view UCSC Genome Browser custom track)
Alignm length: 352
Alignm identity: 240
Alignm E-value: 1e-33
Alignm gaps (pig, cow): 25, 59

Conread position: 436-753
Cow position: chr29:8293014-8292700 (view UCSC Genome Browser custom track)
Alignm length: 322
Alignm identity: 204
Alignm E-value: 4e-22
Alignm gaps (pig, cow): 20, 58

Conread position: 437-764
Cow position: chr29:29189188-29188871 (view UCSC Genome Browser custom track)
Alignm length: 333
Alignm identity: 217
Alignm E-value: 4e-23
Alignm gaps (pig, cow): 122, 21

Conread position: 443-759
Cow position: chr29:32733209-32733520 (view UCSC Genome Browser custom track)
Alignm length: 325
Alignm identity: 214
Alignm E-value: 2e-25
Alignm gaps (pig, cow): 39, 23

Conread position: 446-739
Cow position: chr29:15947083-15947367 (view UCSC Genome Browser custom track)
Alignm length: 299
Alignm identity: 219
Alignm E-value: 3.00004e-41
Alignm gaps (pig, cow): 10, 22

Conread position: 450-599
Cow position: chr29:13867295-13867147 (view UCSC Genome Browser custom track)
Alignm length: 151
Alignm identity: 111
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 71, 55

Conread position: 454-747
Cow position: chr29:501120-501406 (view UCSC Genome Browser custom track)
Alignm length: 299
Alignm identity: 199
Alignm E-value: 1e-23
Alignm gaps (pig, cow): 146, 47

Conread position: 455-760
Cow position: chr29:22519208-22518904 (view UCSC Genome Browser custom track)
Alignm length: 317
Alignm identity: 219
Alignm E-value: 1e-30
Alignm gaps (pig, cow): 51, 38

Conread position: 458-744
Cow position: chr29:23220577-23220287 (view UCSC Genome Browser custom track)
Alignm length: 295
Alignm identity: 195
Alignm E-value: 2e-25
Alignm gaps (pig, cow): 39, 56

Conread position: 461-752
Cow position: chr29:32656359-32656647 (view UCSC Genome Browser custom track)
Alignm length: 296
Alignm identity: 205
Alignm E-value: 2e-35
Alignm gaps (pig, cow): 143, 43

Conread position: 466-762
Cow position: chr29:31092382-31092669 (view UCSC Genome Browser custom track)
Alignm length: 299
Alignm identity: 197
Alignm E-value: 5e-25
Alignm gaps (pig, cow): 10, 28

Conread position: 469-748
Cow position: chr29:30367122-30366848 (view UCSC Genome Browser custom track)
Alignm length: 283
Alignm identity: 185
Alignm E-value: 4e-23
Alignm gaps (pig, cow): 130, 24

Conread position: 469-762
Cow position: chr29:27926710-27926995 (view UCSC Genome Browser custom track)
Alignm length: 298
Alignm identity: 200
Alignm E-value: 2e-25
Alignm gaps (pig, cow): 8, 25

Conread position: 470-762
Cow position: chr29:5995164-5994870 (view UCSC Genome Browser custom track)
Alignm length: 302
Alignm identity: 196
Alignm E-value: 3e-21
Alignm gaps (pig, cow): 32, 125

Conread position: 470-775
Cow position: chr29:42630058-42630352 (view UCSC Genome Browser custom track)
Alignm length: 307
Alignm identity: 205
Alignm E-value: 3e-30
Alignm gaps (pig, cow): 292, 23

Conread position: 476-747
Cow position: chr29:16290666-16290929 (view UCSC Genome Browser custom track)
Alignm length: 273
Alignm identity: 185
Alignm E-value: 9e-30
Alignm gaps (pig, cow): 7, 35

Conread position: 491-723
Cow position: chr29:23825252-23825030 (view UCSC Genome Browser custom track)
Alignm length: 233
Alignm identity: 157
Alignm E-value: 3e-21
Alignm gaps (pig, cow): 9, 0

Conread position: 503-768
Cow position: chr29:11042399-11042668 (view UCSC Genome Browser custom track)
Alignm length: 275
Alignm identity: 188
Alignm E-value: 2e-28
Alignm gaps (pig, cow): 97, 214

Conread position: 505-736
Cow position: chr29:24188096-24187868 (view UCSC Genome Browser custom track)
Alignm length: 232
Alignm identity: 152
Alignm E-value: 1e-22
Alignm gaps (pig, cow): 96, 0

Conread position: 505-746
Cow position: chr29:4070597-4070825 (view UCSC Genome Browser custom track)
Alignm length: 242
Alignm identity: 166
Alignm E-value: 4e-23
Alignm gaps (pig, cow): 59, 0

Conread position: 519-757
Cow position: chr29:38754956-38754722 (view UCSC Genome Browser custom track)
Alignm length: 241
Alignm identity: 160
Alignm E-value: 1e-22
Alignm gaps (pig, cow): 62, 84

Conread position: 520-757
Cow position: chr29:16200494-16200261 (view UCSC Genome Browser custom track)
Alignm length: 241
Alignm identity: 170
Alignm E-value: 3e-30
Alignm gaps (pig, cow): 80, 117

Conread position: 522-765
Cow position: chr29:21018760-21018520 (view UCSC Genome Browser custom track)
Alignm length: 246
Alignm identity: 166
Alignm E-value: 2e-25
Alignm gaps (pig, cow): 78, 120

Conread position: 530-737
Cow position: chr29:3292942-3293139 (view UCSC Genome Browser custom track)
Alignm length: 208
Alignm identity: 144
Alignm E-value: 4e-22
Alignm gaps (pig, cow): 72, 0

Conread position: 534-736
Cow position: chr29:4441207-4441010 (view UCSC Genome Browser custom track)
Alignm length: 207
Alignm identity: 149
Alignm E-value: 5e-25
Alignm gaps (pig, cow): 23, 90

Conread position: 534-764
Cow position: chr29:13558331-13558560 (view UCSC Genome Browser custom track)
Alignm length: 233
Alignm identity: 155
Alignm E-value: 1e-22
Alignm gaps (pig, cow): 66, 99

Conread position: 535-752
Cow position: chr29:26211051-26211264 (view UCSC Genome Browser custom track)
Alignm length: 220
Alignm identity: 156
Alignm E-value: 2e-28
Alignm gaps (pig, cow): 94, 67

Conread position: 537-761
Cow position: chr29:28087672-28087894 (view UCSC Genome Browser custom track)
Alignm length: 227
Alignm identity: 153
Alignm E-value: 1e-22
Alignm gaps (pig, cow): 87, 7

Conread position: 544-767
Cow position: chr29:14375873-14375653 (view UCSC Genome Browser custom track)
Alignm length: 225
Alignm identity: 158
Alignm E-value: 9e-30
Alignm gaps (pig, cow): 98, 58

Conread position: 544-776
Cow position: chr29:8163821-8163591 (view UCSC Genome Browser custom track)
Alignm length: 237
Alignm identity: 162
Alignm E-value: 2e-24
Alignm gaps (pig, cow): 85, 58

Conread position: 545-759
Cow position: chr29:19363720-19363925 (view UCSC Genome Browser custom track)
Alignm length: 215
Alignm identity: 147
Alignm E-value: 3e-21
Alignm gaps (pig, cow): 33, 0

Conread position: 546-754
Cow position: chr29:26631052-26631263 (view UCSC Genome Browser custom track)
Alignm length: 214
Alignm identity: 148
Alignm E-value: 4e-23
Alignm gaps (pig, cow): 54, 8

Conread position: 548-762
Cow position: chr29:24026703-24026923 (view UCSC Genome Browser custom track)
Alignm length: 225
Alignm identity: 162
Alignm E-value: 5e-25
Alignm gaps (pig, cow): 5, 110

Conread position: 597-747
Cow position: chr29:34600786-34600646 (view UCSC Genome Browser custom track)
Alignm length: 151
Alignm identity: 116
Alignm E-value: 1e-22
Alignm gaps (pig, cow): 28, 0

Conread position: 597-762
Cow position: chr29:17022231-17022403 (view UCSC Genome Browser custom track)
Alignm length: 173
Alignm identity: 124
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 61, 0

Conread position: 597-764
Cow position: chr29:6271697-6271870 (view UCSC Genome Browser custom track)
Alignm length: 176
Alignm identity: 128
Alignm E-value: 3e-21
Alignm gaps (pig, cow): 39, 35

Conread position: 597-764
Cow position: chr29:29940722-29940890 (view UCSC Genome Browser custom track)
Alignm length: 170
Alignm identity: 123
Alignm E-value: 5e-24
Alignm gaps (pig, cow): 34, 142

Conread position: 599-745
Cow position: chr29:28734050-28733905 (view UCSC Genome Browser custom track)
Alignm length: 147
Alignm identity: 113
Alignm E-value: 2e-27
Alignm gaps (pig, cow): 56, 0

Conread position: 621-765
Cow position: chr29:4603049-4602904 (view UCSC Genome Browser custom track)
Alignm length: 147
Alignm identity: 109
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 15, 38

Conread position: 640-761
Cow position: chr29:28616821-28616941 (view UCSC Genome Browser custom track)
Alignm length: 123
Alignm identity: 97
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 103, 13

Conread position: 640-765
Cow position: chr29:26777110-26777234 (view UCSC Genome Browser custom track)
Alignm length: 126
Alignm identity: 97
Alignm E-value: 4e-22
Alignm gaps (pig, cow): 18, 0

Conread position: 652-775
Cow position: chr29:34483513-34483395 (view UCSC Genome Browser custom track)
Alignm length: 124
Alignm identity: 98
Alignm E-value: 3e-21
Alignm gaps (pig, cow): 6, 0

Conread position: 654-761
Cow position: chr29:14746891-14746999 (view UCSC Genome Browser custom track)
Alignm length: 109
Alignm identity: 91
Alignm E-value: 2e-24
Alignm gaps (pig, cow): 96, 0

Conread position: 656-764
Cow position: chr29:11685284-11685391 (view UCSC Genome Browser custom track)
Alignm length: 109
Alignm identity: 90
Alignm E-value: 1e-23
Alignm gaps (pig, cow): 93, 0

Conread position: 657-768
Cow position: chr29:22814558-22814448 (view UCSC Genome Browser custom track)
Alignm length: 112
Alignm identity: 90
Alignm E-value: 4e-22
Alignm gaps (pig, cow): 59, 0

Conread position: 664-772
Cow position: chr29:16164985-16164879 (view UCSC Genome Browser custom track)
Alignm length: 109
Alignm identity: 89
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 5, 0

Show alignments to all cow chromosomes.