Non-Coding RNA Search

Cow genome map


           Conread name:
           Utr1-UTR01D050106
        

               Conread position:
               1-479
               

               Cow position:
               chr5:7385648-7386118 (view UCSC Genome Browser custom track)
               

               Alignm length:
               487
               

               Alignm identity:
               329
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               71, 186
               

               Conread position:
               1-511
               

               Cow position:
               chr5:33467542-33467039 (view UCSC Genome Browser custom track)
               

               Alignm length:
               516
               

               Alignm identity:
               324
               

               Alignm E-value:
               1e-38
               

               Alignm gaps (pig, cow):
               181, 154
               

               Conread position:
               1-535
               

               Cow position:
               chr5:34115147-34115680 (view UCSC Genome Browser custom track)
               

               Alignm length:
               556
               

               Alignm identity:
               415
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               136, 186
               

               Conread position:
               1-541
               

               Cow position:
               chr5:58460900-58460364 (view UCSC Genome Browser custom track)
               

               Alignm length:
               552
               

               Alignm identity:
               398
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               141, 133
               

               Conread position:
               1-551
               

               Cow position:
               chr5:16184597-16185131 (view UCSC Genome Browser custom track)
               

               Alignm length:
               553
               

               Alignm identity:
               431
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               455, 187
               

               Conread position:
               1-552
               

               Cow position:
               chr5:21943882-21944442 (view UCSC Genome Browser custom track)
               

               Alignm length:
               571
               

               Alignm identity:
               413
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               148, 191
               

               Conread position:
               1-555
               

               Cow position:
               chr5:41523280-41522755 (view UCSC Genome Browser custom track)
               

               Alignm length:
               555
               

               Alignm identity:
               412
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               55, 0
               

               Conread position:
               1-562
               

               Cow position:
               chr5:10261738-10261179 (view UCSC Genome Browser custom track)
               

               Alignm length:
               575
               

               Alignm identity:
               409
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               129, 192
               

               Conread position:
               1-566
               

               Cow position:
               chr5:62827249-62826692 (view UCSC Genome Browser custom track)
               

               Alignm length:
               570
               

               Alignm identity:
               421
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               455, 167
               

               Conread position:
               1-570
               

               Cow position:
               chr5:4032506-4031927 (view UCSC Genome Browser custom track)
               

               Alignm length:
               592
               

               Alignm identity:
               418
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               136, 119
               

               Conread position:
               1-578
               

               Cow position:
               chr5:56442787-56443345 (view UCSC Genome Browser custom track)
               

               Alignm length:
               591
               

               Alignm identity:
               422
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               169, 129
               

               Conread position:
               1-587
               

               Cow position:
               chr5:3281363-3280796 (view UCSC Genome Browser custom track)
               

               Alignm length:
               591
               

               Alignm identity:
               425
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               37, 168
               

               Conread position:
               1-596
               

               Cow position:
               chr5:16206637-16206067 (view UCSC Genome Browser custom track)
               

               Alignm length:
               598
               

               Alignm identity:
               442
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               455, 191
               

               Conread position:
               1-598
               

               Cow position:
               chr5:360436-359849 (view UCSC Genome Browser custom track)
               

               Alignm length:
               608
               

               Alignm identity:
               448
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               130, 58
               

               Conread position:
               1-598
               

               Cow position:
               chr5:16508591-16509196 (view UCSC Genome Browser custom track)
               

               Alignm length:
               620
               

               Alignm identity:
               453
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               88, 163
               

               Conread position:
               1-599
               

               Cow position:
               chr5:26094653-26094075 (view UCSC Genome Browser custom track)
               

               Alignm length:
               610
               

               Alignm identity:
               448
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               223, 48
               

               Conread position:
               1-600
               

               Cow position:
               chr5:32697280-32696730 (view UCSC Genome Browser custom track)
               

               Alignm length:
               600
               

               Alignm identity:
               436
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               101, 0
               

               Conread position:
               1-600
               

               Cow position:
               chr5:56467211-56467783 (view UCSC Genome Browser custom track)
               

               Alignm length:
               606
               

               Alignm identity:
               435
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               336, 38
               

               Conread position:
               1-654
               

               Cow position:
               chr5:47889195-47888568 (view UCSC Genome Browser custom track)
               

               Alignm length:
               661
               

               Alignm identity:
               462
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               374, 48
               

               Conread position:
               1-673
               

               Cow position:
               chr5:58855613-58856270 (view UCSC Genome Browser custom track)
               

               Alignm length:
               682
               

               Alignm identity:
               498
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               162, 11
               

               Conread position:
               1-689
               

               Cow position:
               chr5:34528083-34528721 (view UCSC Genome Browser custom track)
               

               Alignm length:
               690
               

               Alignm identity:
               496
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               394, 74
               

               Conread position:
               1-722
               

               Cow position:
               chr5:26378162-26377471 (view UCSC Genome Browser custom track)
               

               Alignm length:
               727
               

               Alignm identity:
               501
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               77, 8
               

               Conread position:
               1-725
               

               Cow position:
               chr5:37645571-37646287 (view UCSC Genome Browser custom track)
               

               Alignm length:
               739
               

               Alignm identity:
               522
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               274, 50
               

               Conread position:
               1-726
               

               Cow position:
               chr5:16894264-16893565 (view UCSC Genome Browser custom track)
               

               Alignm length:
               733
               

               Alignm identity:
               523
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               374, 183
               

               Conread position:
               1-728
               

               Cow position:
               chr5:55942892-55942162 (view UCSC Genome Browser custom track)
               

               Alignm length:
               751
               

               Alignm identity:
               506
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               212, 133
               

               Conread position:
               1-730
               

               Cow position:
               chr5:50599577-50600263 (view UCSC Genome Browser custom track)
               

               Alignm length:
               735
               

               Alignm identity:
               491
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               374, 17
               

               Conread position:
               1-735
               

               Cow position:
               chr5:55756934-55756191 (view UCSC Genome Browser custom track)
               

               Alignm length:
               760
               

               Alignm identity:
               558
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               130, 166
               

               Conread position:
               1-735
               

               Cow position:
               chr5:63647962-63647255 (view UCSC Genome Browser custom track)
               

               Alignm length:
               742
               

               Alignm identity:
               517
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               169, 150
               

               Conread position:
               1-739
               

               Cow position:
               chr5:47871541-47870828 (view UCSC Genome Browser custom track)
               

               Alignm length:
               750
               

               Alignm identity:
               551
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               10, 128
               

               Conread position:
               1-740
               

               Cow position:
               chr5:15478614-15479356 (view UCSC Genome Browser custom track)
               

               Alignm length:
               760
               

               Alignm identity:
               551
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               271, 186
               

               Conread position:
               1-741
               

               Cow position:
               chr5:29904016-29903315 (view UCSC Genome Browser custom track)
               

               Alignm length:
               746
               

               Alignm identity:
               526
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               299, 36
               

               Conread position:
               1-743
               

               Cow position:
               chr5:29827558-29828278 (view UCSC Genome Browser custom track)
               

               Alignm length:
               747
               

               Alignm identity:
               546
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               456, 187
               

               Conread position:
               1-743
               

               Cow position:
               chr5:45846187-45845460 (view UCSC Genome Browser custom track)
               

               Alignm length:
               752
               

               Alignm identity:
               531
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               76, 152
               

               Conread position:
               1-747
               

               Cow position:
               chr5:21828361-21829098 (view UCSC Genome Browser custom track)
               

               Alignm length:
               759
               

               Alignm identity:
               525
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               262, 187
               

               Conread position:
               1-747
               

               Cow position:
               chr5:28223968-28224675 (view UCSC Genome Browser custom track)
               

               Alignm length:
               749
               

               Alignm identity:
               528
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               60, 15
               

               Conread position:
               1-747
               

               Cow position:
               chr5:43923644-43922937 (view UCSC Genome Browser custom track)
               

               Alignm length:
               755
               

               Alignm identity:
               532
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               374, 183
               

               Conread position:
               1-747
               

               Cow position:
               chr5:64321260-64321994 (view UCSC Genome Browser custom track)
               

               Alignm length:
               763
               

               Alignm identity:
               534
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               118, 57
               

               Conread position:
               1-749
               

               Cow position:
               chr5:31470070-31469355 (view UCSC Genome Browser custom track)
               

               Alignm length:
               754
               

               Alignm identity:
               539
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               26, 181
               

               Conread position:
               1-752
               

               Cow position:
               chr5:53855214-53855958 (view UCSC Genome Browser custom track)
               

               Alignm length:
               775
               

               Alignm identity:
               551
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               64, 86
               

               Conread position:
               1-757
               

               Cow position:
               chr5:18573675-18574426 (view UCSC Genome Browser custom track)
               

               Alignm length:
               770
               

               Alignm identity:
               568
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               235, 187
               

               Conread position:
               1-758
               

               Cow position:
               chr5:23141072-23140343 (view UCSC Genome Browser custom track)
               

               Alignm length:
               765
               

               Alignm identity:
               536
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               269, 186
               

               Conread position:
               1-760
               

               Cow position:
               chr5:2310076-2309312 (view UCSC Genome Browser custom track)
               

               Alignm length:
               781
               

               Alignm identity:
               543
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               156, 188
               

               Conread position:
               1-762
               

               Cow position:
               chr5:5937829-5938576 (view UCSC Genome Browser custom track)
               

               Alignm length:
               770
               

               Alignm identity:
               557
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               293, 193
               

               Conread position:
               1-764
               

               Cow position:
               chr5:14551073-14550332 (view UCSC Genome Browser custom track)
               

               Alignm length:
               769
               

               Alignm identity:
               548
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               374, 95
               

               Conread position:
               1-764
               

               Cow position:
               chr5:27179164-27179915 (view UCSC Genome Browser custom track)
               

               Alignm length:
               783
               

               Alignm identity:
               533
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               111, 102
               

               Conread position:
               1-770
               

               Cow position:
               chr5:28330818-28330084 (view UCSC Genome Browser custom track)
               

               Alignm length:
               774
               

               Alignm identity:
               533
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               422, 93
               

               Conread position:
               1-773
               

               Cow position:
               chr5:34506421-34505661 (view UCSC Genome Browser custom track)
               

               Alignm length:
               781
               

               Alignm identity:
               554
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               422, 191
               

               Conread position:
               3-751
               

               Cow position:
               chr5:32394119-32394840 (view UCSC Genome Browser custom track)
               

               Alignm length:
               761
               

               Alignm identity:
               514
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               285, 181
               

               Conread position:
               5-505
               

               Cow position:
               chr5:65933421-65932930 (view UCSC Genome Browser custom track)
               

               Alignm length:
               509
               

               Alignm identity:
               395
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               123, 47
               

               Conread position:
               5-560
               

               Cow position:
               chr5:24485905-24485382 (view UCSC Genome Browser custom track)
               

               Alignm length:
               565
               

               Alignm identity:
               396
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               77, 112
               

               Conread position:
               5-575
               

               Cow position:
               chr5:54714233-54713665 (view UCSC Genome Browser custom track)
               

               Alignm length:
               579
               

               Alignm identity:
               431
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               265, 179
               

               Conread position:
               5-579
               

               Cow position:
               chr5:41392255-41392808 (view UCSC Genome Browser custom track)
               

               Alignm length:
               582
               

               Alignm identity:
               393
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               131, 30
               

               Conread position:
               5-655
               

               Cow position:
               chr5:42667882-42667243 (view UCSC Genome Browser custom track)
               

               Alignm length:
               665
               

               Alignm identity:
               478
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               43, 107
               

               Conread position:
               5-716
               

               Cow position:
               chr5:48828655-48829358 (view UCSC Genome Browser custom track)
               

               Alignm length:
               728
               

               Alignm identity:
               518
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               80, 36
               

               Conread position:
               5-720
               

               Cow position:
               chr5:64524372-64523657 (view UCSC Genome Browser custom track)
               

               Alignm length:
               735
               

               Alignm identity:
               508
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               161, 181
               

               Conread position:
               5-725
               

               Cow position:
               chr5:26096805-26097502 (view UCSC Genome Browser custom track)
               

               Alignm length:
               723
               

               Alignm identity:
               512
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               123, 73
               

               Conread position:
               5-736
               

               Cow position:
               chr5:39448025-39447302 (view UCSC Genome Browser custom track)
               

               Alignm length:
               742
               

               Alignm identity:
               533
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               258, 116
               

               Conread position:
               5-742
               

               Cow position:
               chr5:14904547-14903837 (view UCSC Genome Browser custom track)
               

               Alignm length:
               752
               

               Alignm identity:
               539
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               407, 183
               

               Conread position:
               5-742
               

               Cow position:
               chr5:52165670-52164944 (view UCSC Genome Browser custom track)
               

               Alignm length:
               746
               

               Alignm identity:
               531
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               231, 179
               

               Conread position:
               5-745
               

               Cow position:
               chr5:54876155-54875461 (view UCSC Genome Browser custom track)
               

               Alignm length:
               751
               

               Alignm identity:
               499
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               181, 98
               

               Conread position:
               5-746
               

               Cow position:
               chr5:21616977-21617687 (view UCSC Genome Browser custom track)
               

               Alignm length:
               748
               

               Alignm identity:
               514
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               231, 45
               

               Conread position:
               5-747
               

               Cow position:
               chr5:12323285-12322577 (view UCSC Genome Browser custom track)
               

               Alignm length:
               749
               

               Alignm identity:
               500
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               73, 16
               

               Conread position:
               5-747
               

               Cow position:
               chr5:32378378-32379112 (view UCSC Genome Browser custom track)
               

               Alignm length:
               778
               

               Alignm identity:
               523
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               13, 56
               

               Conread position:
               5-748
               

               Cow position:
               chr5:57935593-57934886 (view UCSC Genome Browser custom track)
               

               Alignm length:
               751
               

               Alignm identity:
               522
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               346, 47
               

               Conread position:
               5-758
               

               Cow position:
               chr5:24348633-24349360 (view UCSC Genome Browser custom track)
               

               Alignm length:
               760
               

               Alignm identity:
               555
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               451, 70
               

               Conread position:
               5-758
               

               Cow position:
               chr5:35207770-35208507 (view UCSC Genome Browser custom track)
               

               Alignm length:
               761
               

               Alignm identity:
               543
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               363, 183
               

               Conread position:
               5-769
               

               Cow position:
               chr5:44848505-44847773 (view UCSC Genome Browser custom track)
               

               Alignm length:
               780
               

               Alignm identity:
               543
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               134, 190
               

               Conread position:
               6-748
               

               Cow position:
               chr5:66257158-66257869 (view UCSC Genome Browser custom track)
               

               Alignm length:
               744
               

               Alignm identity:
               507
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               450, 136
               

               Conread position:
               7-567
               

               Cow position:
               chr5:54405384-54404831 (view UCSC Genome Browser custom track)
               

               Alignm length:
               568
               

               Alignm identity:
               432
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               133, 186
               

               Conread position:
               7-744
               

               Cow position:
               chr5:8024682-8023985 (view UCSC Genome Browser custom track)
               

               Alignm length:
               746
               

               Alignm identity:
               509
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               69, 193
               

               Conread position:
               12-552
               

               Cow position:
               chr5:7140568-7140062 (view UCSC Genome Browser custom track)
               

               Alignm length:
               547
               

               Alignm identity:
               394
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               34, 68
               

               Conread position:
               12-598
               

               Cow position:
               chr5:37190572-37190007 (view UCSC Genome Browser custom track)
               

               Alignm length:
               593
               

               Alignm identity:
               429
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               66, 97
               

               Conread position:
               13-599
               

               Cow position:
               chr5:46611587-46611007 (view UCSC Genome Browser custom track)
               

               Alignm length:
               614
               

               Alignm identity:
               410
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               72, 191
               

               Conread position:
               13-601
               

               Cow position:
               chr5:41951563-41951003 (view UCSC Genome Browser custom track)
               

               Alignm length:
               589
               

               Alignm identity:
               442
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               82, 0
               

               Conread position:
               17-599
               

               Cow position:
               chr5:52645566-52644989 (view UCSC Genome Browser custom track)
               

               Alignm length:
               594
               

               Alignm identity:
               405
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               81, 43
               

               Conread position:
               21-650
               

               Cow position:
               chr5:3242934-3242336 (view UCSC Genome Browser custom track)
               

               Alignm length:
               634
               

               Alignm identity:
               441
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               435, 41
               

               Conread position:
               23-744
               

               Cow position:
               chr5:67932942-67932235 (view UCSC Genome Browser custom track)
               

               Alignm length:
               737
               

               Alignm identity:
               499
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               116, 56
               

               Conread position:
               26-766
               

               Cow position:
               chr5:55176416-55177131 (view UCSC Genome Browser custom track)
               

               Alignm length:
               756
               

               Alignm identity:
               522
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               108, 164
               

               Conread position:
               29-598
               

               Cow position:
               chr5:31480686-31481238 (view UCSC Genome Browser custom track)
               

               Alignm length:
               571
               

               Alignm identity:
               413
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               474, 155
               

               Conread position:
               32-542
               

               Cow position:
               chr5:6129892-6130388 (view UCSC Genome Browser custom track)
               

               Alignm length:
               512
               

               Alignm identity:
               372
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               424, 152
               

               Conread position:
               34-578
               

               Cow position:
               chr5:2500655-2500109 (view UCSC Genome Browser custom track)
               

               Alignm length:
               556
               

               Alignm identity:
               389
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               266, 150
               

               Conread position:
               37-742
               

               Cow position:
               chr5:47601349-47602037 (view UCSC Genome Browser custom track)
               

               Alignm length:
               717
               

               Alignm identity:
               494
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               11, 150
               

               Conread position:
               37-759
               

               Cow position:
               chr5:52040769-52040071 (view UCSC Genome Browser custom track)
               

               Alignm length:
               735
               

               Alignm identity:
               492
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               69, 75
               

               Conread position:
               38-729
               

               Cow position:
               chr5:35144885-35145551 (view UCSC Genome Browser custom track)
               

               Alignm length:
               703
               

               Alignm identity:
               493
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               95, 157
               

               Conread position:
               42-645
               

               Cow position:
               chr5:30486799-30487382 (view UCSC Genome Browser custom track)
               

               Alignm length:
               614
               

               Alignm identity:
               455
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               194, 47
               

               Conread position:
               42-680
               

               Cow position:
               chr5:44752773-44752138 (view UCSC Genome Browser custom track)
               

               Alignm length:
               656
               

               Alignm identity:
               479
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               95, 149
               

               Conread position:
               47-598
               

               Cow position:
               chr5:3204391-3204920 (view UCSC Genome Browser custom track)
               

               Alignm length:
               555
               

               Alignm identity:
               397
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               360, 30
               

               Conread position:
               47-748
               

               Cow position:
               chr5:65776845-65776142 (view UCSC Genome Browser custom track)
               

               Alignm length:
               728
               

               Alignm identity:
               513
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               87, 24
               

               Conread position:
               48-764
               

               Cow position:
               chr5:12873301-12874003 (view UCSC Genome Browser custom track)
               

               Alignm length:
               730
               

               Alignm identity:
               491
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               92, 31
               

               Conread position:
               53-673
               

               Cow position:
               chr5:46510311-46509694 (view UCSC Genome Browser custom track)
               

               Alignm length:
               630
               

               Alignm identity:
               436
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               333, 135
               

               Conread position:
               54-735
               

               Cow position:
               chr5:50821347-50822024 (view UCSC Genome Browser custom track)
               

               Alignm length:
               701
               

               Alignm identity:
               484
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               182, 31
               

               Conread position:
               57-547
               

               Cow position:
               chr5:26790883-26790416 (view UCSC Genome Browser custom track)
               

               Alignm length:
               492
               

               Alignm identity:
               352
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               399, 127
               

               Conread position:
               57-589
               

               Cow position:
               chr5:19813660-19813139 (view UCSC Genome Browser custom track)
               

               Alignm length:
               543
               

               Alignm identity:
               383
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               20, 128
               

               Conread position:
               59-736
               

               Cow position:
               chr5:69337377-69338037 (view UCSC Genome Browser custom track)
               

               Alignm length:
               697
               

               Alignm identity:
               468
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               172, 122
               

               Conread position:
               64-766
               

               Cow position:
               chr5:58519831-58519160 (view UCSC Genome Browser custom track)
               

               Alignm length:
               715
               

               Alignm identity:
               513
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               103, 13
               

               Conread position:
               65-598
               

               Cow position:
               chr5:6528250-6528773 (view UCSC Genome Browser custom track)
               

               Alignm length:
               542
               

               Alignm identity:
               393
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               312, 101
               

               Conread position:
               71-599
               

               Cow position:
               chr5:61839761-61840279 (view UCSC Genome Browser custom track)
               

               Alignm length:
               536
               

               Alignm identity:
               408
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               16, 115
               

               Conread position:
               73-526
               

               Cow position:
               chr5:14420768-14420322 (view UCSC Genome Browser custom track)
               

               Alignm length:
               461
               

               Alignm identity:
               348
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               293, 115
               

               Conread position:
               73-745
               

               Cow position:
               chr5:55068299-55068932 (view UCSC Genome Browser custom track)
               

               Alignm length:
               675
               

               Alignm identity:
               457
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               439, 95
               

               Conread position:
               76-726
               

               Cow position:
               chr5:33414825-33414195 (view UCSC Genome Browser custom track)
               

               Alignm length:
               657
               

               Alignm identity:
               464
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               317, 112
               

               Conread position:
               77-699
               

               Cow position:
               chr5:7193013-7193599 (view UCSC Genome Browser custom track)
               

               Alignm length:
               627
               

               Alignm identity:
               428
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               64, 51
               

               Conread position:
               80-598
               

               Cow position:
               chr5:65887430-65886920 (view UCSC Genome Browser custom track)
               

               Alignm length:
               527
               

               Alignm identity:
               370
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               295, 76
               

               Conread position:
               85-597
               

               Cow position:
               chr5:39094142-39094639 (view UCSC Genome Browser custom track)
               

               Alignm length:
               516
               

               Alignm identity:
               374
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               62, 93
               

               Conread position:
               91-681
               

               Cow position:
               chr5:21040379-21039812 (view UCSC Genome Browser custom track)
               

               Alignm length:
               598
               

               Alignm identity:
               422
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               86, 94
               

               Conread position:
               92-510
               

               Cow position:
               chr5:14415368-14415777 (view UCSC Genome Browser custom track)
               

               Alignm length:
               430
               

               Alignm identity:
               314
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               66, 47
               

               Conread position:
               93-584
               

               Cow position:
               chr5:13691978-13691491 (view UCSC Genome Browser custom track)
               

               Alignm length:
               500
               

               Alignm identity:
               368
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               220, 91
               

               Conread position:
               96-558
               

               Cow position:
               chr5:42777374-42777815 (view UCSC Genome Browser custom track)
               

               Alignm length:
               466
               

               Alignm identity:
               328
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               64, 84
               

               Conread position:
               96-566
               

               Cow position:
               chr5:41531490-41531027 (view UCSC Genome Browser custom track)
               

               Alignm length:
               480
               

               Alignm identity:
               344
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               151, 88
               

               Conread position:
               110-592
               

               Cow position:
               chr5:72564373-72564848 (view UCSC Genome Browser custom track)
               

               Alignm length:
               486
               

               Alignm identity:
               351
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               161, 82
               

               Conread position:
               110-765
               

               Cow position:
               chr5:12149159-12149803 (view UCSC Genome Browser custom track)
               

               Alignm length:
               668
               

               Alignm identity:
               460
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               6, 79
               

               Conread position:
               111-506
               

               Cow position:
               chr5:31020499-31020140 (view UCSC Genome Browser custom track)
               

               Alignm length:
               397
               

               Alignm identity:
               288
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               345, 77
               

               Conread position:
               111-541
               

               Cow position:
               chr5:44583499-44583099 (view UCSC Genome Browser custom track)
               

               Alignm length:
               433
               

               Alignm identity:
               321
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               54, 74
               

               Conread position:
               111-763
               

               Cow position:
               chr5:60210524-60209897 (view UCSC Genome Browser custom track)
               

               Alignm length:
               660
               

               Alignm identity:
               449
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               183, 72
               

               Conread position:
               115-761
               

               Cow position:
               chr5:54310948-54311603 (view UCSC Genome Browser custom track)
               

               Alignm length:
               672
               

               Alignm identity:
               478
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               158, 50
               

               Conread position:
               117-638
               

               Cow position:
               chr5:40357269-40356708 (view UCSC Genome Browser custom track)
               

               Alignm length:
               571
               

               Alignm identity:
               398
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               25, 70
               

               Conread position:
               121-767
               

               Cow position:
               chr5:38852984-38853607 (view UCSC Genome Browser custom track)
               

               Alignm length:
               656
               

               Alignm identity:
               451
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               254, 67
               

               Conread position:
               122-547
               

               Cow position:
               chr5:23856537-23856121 (view UCSC Genome Browser custom track)
               

               Alignm length:
               433
               

               Alignm identity:
               324
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               285, 70
               

               Conread position:
               135-524
               

               Cow position:
               chr5:20974808-20974426 (view UCSC Genome Browser custom track)
               

               Alignm length:
               395
               

               Alignm identity:
               275
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               9, 49
               

               Conread position:
               135-743
               

               Cow position:
               chr5:44994407-44993809 (view UCSC Genome Browser custom track)
               

               Alignm length:
               628
               

               Alignm identity:
               437
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               7, 50
               

               Conread position:
               136-598
               

               Cow position:
               chr5:39258195-39258595 (view UCSC Genome Browser custom track)
               

               Alignm length:
               463
               

               Alignm identity:
               325
               

               Alignm E-value:
               4e-38
               

               Alignm gaps (pig, cow):
               5, 0
               

               Conread position:
               140-766
               

               Cow position:
               chr5:9894480-9893871 (view UCSC Genome Browser custom track)
               

               Alignm length:
               633
               

               Alignm identity:
               431
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               316, 41
               

               Conread position:
               146-764
               

               Cow position:
               chr5:32153666-32153060 (view UCSC Genome Browser custom track)
               

               Alignm length:
               627
               

               Alignm identity:
               433
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               241, 35
               

               Conread position:
               148-570
               

               Cow position:
               chr5:28927945-28927523 (view UCSC Genome Browser custom track)
               

               Alignm length:
               432
               

               Alignm identity:
               317
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               124, 35
               

               Conread position:
               148-584
               

               Cow position:
               chr5:32141047-32140632 (view UCSC Genome Browser custom track)
               

               Alignm length:
               439
               

               Alignm identity:
               316
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               14, 42
               

               Conread position:
               150-747
               

               Cow position:
               chr5:42845946-42845360 (view UCSC Genome Browser custom track)
               

               Alignm length:
               612
               

               Alignm identity:
               438
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               261, 38
               

               Conread position:
               155-593
               

               Cow position:
               chr5:47313132-47313558 (view UCSC Genome Browser custom track)
               

               Alignm length:
               444
               

               Alignm identity:
               320
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               198, 33
               

               Conread position:
               155-745
               

               Cow position:
               chr5:39936762-39937348 (view UCSC Genome Browser custom track)
               

               Alignm length:
               604
               

               Alignm identity:
               432
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               263, 29
               

               Conread position:
               157-455
               

               Cow position:
               chr5:35123883-35123587 (view UCSC Genome Browser custom track)
               

               Alignm length:
               304
               

               Alignm identity:
               212
               

               Alignm E-value:
               1e-38
               

               Alignm gaps (pig, cow):
               115, 31
               

               Conread position:
               159-550
               

               Cow position:
               chr5:20344832-20345204 (view UCSC Genome Browser custom track)
               

               Alignm length:
               400
               

               Alignm identity:
               286
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               216, 25
               

               Conread position:
               163-746
               

               Cow position:
               chr5:45226162-45225591 (view UCSC Genome Browser custom track)
               

               Alignm length:
               599
               

               Alignm identity:
               431
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               18, 29
               

               Conread position:
               174-726
               

               Cow position:
               chr5:50483189-50482645 (view UCSC Genome Browser custom track)
               

               Alignm length:
               561
               

               Alignm identity:
               376
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               282, 91
               

               Conread position:
               189-743
               

               Cow position:
               chr5:44797024-44796506 (view UCSC Genome Browser custom track)
               

               Alignm length:
               557
               

               Alignm identity:
               389
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               267, 12
               

               Conread position:
               199-739
               

               Cow position:
               chr5:3491907-3492411 (view UCSC Genome Browser custom track)
               

               Alignm length:
               545
               

               Alignm identity:
               379
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               257, 37
               

               Conread position:
               202-497
               

               Cow position:
               chr5:72149952-72150239 (view UCSC Genome Browser custom track)
               

               Alignm length:
               298
               

               Alignm identity:
               222
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               254, 50
               

               Conread position:
               202-591
               

               Cow position:
               chr5:45170062-45170442 (view UCSC Genome Browser custom track)
               

               Alignm length:
               397
               

               Alignm identity:
               285
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               53, 64
               

               Conread position:
               202-602
               

               Cow position:
               chr5:27103090-27102700 (view UCSC Genome Browser custom track)
               

               Alignm length:
               407
               

               Alignm identity:
               276
               

               Alignm E-value:
               1.99965e-42
               

               Alignm gaps (pig, cow):
               76, 21
               

               Conread position:
               202-728
               

               Cow position:
               chr5:6504165-6503661 (view UCSC Genome Browser custom track)
               

               Alignm length:
               536
               

               Alignm identity:
               379
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               221, 19
               

               Conread position:
               202-751
               

               Cow position:
               chr5:61725672-61726195 (view UCSC Genome Browser custom track)
               

               Alignm length:
               555
               

               Alignm identity:
               378
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               173, 22
               

               Conread position:
               202-761
               

               Cow position:
               chr5:65752560-65753107 (view UCSC Genome Browser custom track)
               

               Alignm length:
               567
               

               Alignm identity:
               391
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               254, 63
               

               Conread position:
               202-765
               

               Cow position:
               chr5:53055852-53055308 (view UCSC Genome Browser custom track)
               

               Alignm length:
               571
               

               Alignm identity:
               386
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               221, 60
               

               Conread position:
               207-542
               

               Cow position:
               chr5:59443545-59443214 (view UCSC Genome Browser custom track)
               

               Alignm length:
               342
               

               Alignm identity:
               265
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               170, 58
               

               Conread position:
               208-466
               

               Cow position:
               chr5:15462432-15462675 (view UCSC Genome Browser custom track)
               

               Alignm length:
               264
               

               Alignm identity:
               204
               

               Alignm E-value:
               5.99756e-43
               

               Alignm gaps (pig, cow):
               210, 44
               

               Conread position:
               208-497
               

               Cow position:
               chr5:60519882-60520153 (view UCSC Genome Browser custom track)
               

               Alignm length:
               291
               

               Alignm identity:
               227
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               248, 46
               

               Conread position:
               208-588
               

               Cow position:
               chr5:63964474-63964089 (view UCSC Genome Browser custom track)
               

               Alignm length:
               394
               

               Alignm identity:
               286
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               67, 97
               

               Conread position:
               209-529
               

               Cow position:
               chr5:42747870-42748179 (view UCSC Genome Browser custom track)
               

               Alignm length:
               324
               

               Alignm identity:
               242
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               174, 24
               

               Conread position:
               211-749
               

               Cow position:
               chr5:65941542-65941014 (view UCSC Genome Browser custom track)
               

               Alignm length:
               546
               

               Alignm identity:
               382
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               164, 12
               

               Conread position:
               214-516
               

               Cow position:
               chr5:9083047-9083352 (view UCSC Genome Browser custom track)
               

               Alignm length:
               313
               

               Alignm identity:
               216
               

               Alignm E-value:
               7e-34
               

               Alignm gaps (pig, cow):
               22, 28
               

               Conread position:
               214-580
               

               Cow position:
               chr5:72287206-72286843 (view UCSC Genome Browser custom track)
               

               Alignm length:
               375
               

               Alignm identity:
               254
               

               Alignm E-value:
               1e-39
               

               Alignm gaps (pig, cow):
               56, 94
               

               Conread position:
               214-617
               

               Cow position:
               chr5:21963992-21964398 (view UCSC Genome Browser custom track)
               

               Alignm length:
               418
               

               Alignm identity:
               297
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               49, 108
               

               Conread position:
               214-657
               

               Cow position:
               chr5:9090307-9089859 (view UCSC Genome Browser custom track)
               

               Alignm length:
               464
               

               Alignm identity:
               339
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               161, 31
               

               Conread position:
               218-597
               

               Cow position:
               chr5:59271262-59270909 (view UCSC Genome Browser custom track)
               

               Alignm length:
               382
               

               Alignm identity:
               248
               

               Alignm E-value:
               6e-22
               

               Alignm gaps (pig, cow):
               150, 34
               

               Conread position:
               219-749
               

               Cow position:
               chr5:60952380-60952898 (view UCSC Genome Browser custom track)
               

               Alignm length:
               543
               

               Alignm identity:
               360
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               156, 33
               

               Conread position:
               219-765
               

               Cow position:
               chr5:63987729-63987165 (view UCSC Genome Browser custom track)
               

               Alignm length:
               578
               

               Alignm identity:
               417
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               112, 42
               

               Conread position:
               221-598
               

               Cow position:
               chr5:26990112-26990480 (view UCSC Genome Browser custom track)
               

               Alignm length:
               387
               

               Alignm identity:
               281
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               10, 45
               

               Conread position:
               222-727
               

               Cow position:
               chr5:57327509-57328011 (view UCSC Genome Browser custom track)
               

               Alignm length:
               519
               

               Alignm identity:
               358
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               31, 44
               

               Conread position:
               224-769
               

               Cow position:
               chr5:40889560-40889039 (view UCSC Genome Browser custom track)
               

               Alignm length:
               550
               

               Alignm identity:
               388
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               199, 35
               

               Conread position:
               228-510
               

               Cow position:
               chr5:4507234-4506949 (view UCSC Genome Browser custom track)
               

               Alignm length:
               290
               

               Alignm identity:
               216
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               147, 44
               

               Conread position:
               231-752
               

               Cow position:
               chr5:17999766-17999257 (view UCSC Genome Browser custom track)
               

               Alignm length:
               527
               

               Alignm identity:
               371
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               185, 34
               

               Conread position:
               233-476
               

               Cow position:
               chr5:37366622-37366871 (view UCSC Genome Browser custom track)
               

               Alignm length:
               254
               

               Alignm identity:
               195
               

               Alignm E-value:
               2.8026e-45
               

               Alignm gaps (pig, cow):
               58, 39
               

               Conread position:
               234-730
               

               Cow position:
               chr5:34049842-34050325 (view UCSC Genome Browser custom track)
               

               Alignm length:
               505
               

               Alignm identity:
               359
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               141, 39
               

               Conread position:
               237-757
               

               Cow position:
               chr5:42063939-42064450 (view UCSC Genome Browser custom track)
               

               Alignm length:
               528
               

               Alignm identity:
               378
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               174, 36
               

               Conread position:
               245-564
               

               Cow position:
               chr5:65924957-65924634 (view UCSC Genome Browser custom track)
               

               Alignm length:
               328
               

               Alignm identity:
               237
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               129, 66
               

               Conread position:
               246-495
               

               Cow position:
               chr5:6575837-6575602 (view UCSC Genome Browser custom track)
               

               Alignm length:
               250
               

               Alignm identity:
               193
               

               Alignm E-value:
               8.40779e-45
               

               Alignm gaps (pig, cow):
               9, 0
               

               Conread position:
               246-598
               

               Cow position:
               chr5:26370452-26370773 (view UCSC Genome Browser custom track)
               

               Alignm length:
               354
               

               Alignm identity:
               249
               

               Alignm E-value:
               1e-37
               

               Alignm gaps (pig, cow):
               177, 19
               

               Conread position:
               247-742
               

               Cow position:
               chr5:19278947-19278474 (view UCSC Genome Browser custom track)
               

               Alignm length:
               502
               

               Alignm identity:
               336
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               51, 28
               

               Conread position:
               249-646
               

               Cow position:
               chr5:42676982-42677362 (view UCSC Genome Browser custom track)
               

               Alignm length:
               402
               

               Alignm identity:
               274
               

               Alignm E-value:
               1e-38
               

               Alignm gaps (pig, cow):
               207, 16
               

               Conread position:
               250-598
               

               Cow position:
               chr5:4617124-4617456 (view UCSC Genome Browser custom track)
               

               Alignm length:
               351
               

               Alignm identity:
               254
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               271, 35
               

               Conread position:
               250-598
               

               Cow position:
               chr5:65601209-65601547 (view UCSC Genome Browser custom track)
               

               Alignm length:
               352
               

               Alignm identity:
               259
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               46, 15
               

               Conread position:
               250-736
               

               Cow position:
               chr5:59326079-59325596 (view UCSC Genome Browser custom track)
               

               Alignm length:
               508
               

               Alignm identity:
               355
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               199, 23
               

               Conread position:
               256-577
               

               Cow position:
               chr5:32956335-32956026 (view UCSC Genome Browser custom track)
               

               Alignm length:
               323
               

               Alignm identity:
               230
               

               Alignm E-value:
               1.4013e-45
               

               Alignm gaps (pig, cow):
               200, 17
               

               Conread position:
               256-736
               

               Cow position:
               chr5:32975800-32975335 (view UCSC Genome Browser custom track)
               

               Alignm length:
               484
               

               Alignm identity:
               329
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               10, 48
               

               Conread position:
               259-567
               

               Cow position:
               chr5:51999975-52000282 (view UCSC Genome Browser custom track)
               

               Alignm length:
               314
               

               Alignm identity:
               236
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               116, 47
               

               Conread position:
               259-595
               

               Cow position:
               chr5:75437143-75436799 (view UCSC Genome Browser custom track)
               

               Alignm length:
               348
               

               Alignm identity:
               262
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               11, 42
               

               Conread position:
               259-673
               

               Cow position:
               chr5:26477237-26476842 (view UCSC Genome Browser custom track)
               

               Alignm length:
               428
               

               Alignm identity:
               290
               

               Alignm E-value:
               6e-32
               

               Alignm gaps (pig, cow):
               197, 40
               

               Conread position:
               259-710
               

               Cow position:
               chr5:458228-458698 (view UCSC Genome Browser custom track)
               

               Alignm length:
               479
               

               Alignm identity:
               341
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               37, 117
               

               Conread position:
               259-765
               

               Cow position:
               chr5:1247033-1247515 (view UCSC Genome Browser custom track)
               

               Alignm length:
               513
               

               Alignm identity:
               355
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               246, 15
               

               Conread position:
               260-454
               

               Cow position:
               chr5:6032995-6033187 (view UCSC Genome Browser custom track)
               

               Alignm length:
               197
               

               Alignm identity:
               156
               

               Alignm E-value:
               2e-40
               

               Alignm gaps (pig, cow):
               100, 39
               

               Conread position:
               260-740
               

               Cow position:
               chr5:5855634-5856087 (view UCSC Genome Browser custom track)
               

               Alignm length:
               487
               

               Alignm identity:
               308
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               340, 107
               

               Conread position:
               260-741
               

               Cow position:
               chr5:53835472-53835949 (view UCSC Genome Browser custom track)
               

               Alignm length:
               488
               

               Alignm identity:
               337
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               196, 23
               

               Conread position:
               260-747
               

               Cow position:
               chr5:49685526-49685033 (view UCSC Genome Browser custom track)
               

               Alignm length:
               502
               

               Alignm identity:
               351
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               16, 41
               

               Conread position:
               261-744
               

               Cow position:
               chr5:11668420-11667953 (view UCSC Genome Browser custom track)
               

               Alignm length:
               488
               

               Alignm identity:
               360
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               195, 41
               

               Conread position:
               262-742
               

               Cow position:
               chr5:46323053-46322556 (view UCSC Genome Browser custom track)
               

               Alignm length:
               514
               

               Alignm identity:
               356
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               113, 37
               

               Conread position:
               262-747
               

               Cow position:
               chr5:58144847-58144370 (view UCSC Genome Browser custom track)
               

               Alignm length:
               495
               

               Alignm identity:
               368
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               22, 38
               

               Conread position:
               263-562
               

               Cow position:
               chr5:54064539-54064830 (view UCSC Genome Browser custom track)
               

               Alignm length:
               301
               

               Alignm identity:
               221
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               193, 36
               

               Conread position:
               263-601
               

               Cow position:
               chr5:28926426-28926089 (view UCSC Genome Browser custom track)
               

               Alignm length:
               348
               

               Alignm identity:
               258
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               8, 37
               

               Conread position:
               265-524
               

               Cow position:
               chr5:56433563-56433823 (view UCSC Genome Browser custom track)
               

               Alignm length:
               268
               

               Alignm identity:
               199
               

               Alignm E-value:
               1.99965e-42
               

               Alignm gaps (pig, cow):
               100, 34
               

               Conread position:
               265-550
               

               Cow position:
               chr5:30639088-30638821 (view UCSC Genome Browser custom track)
               

               Alignm length:
               286
               

               Alignm identity:
               213
               

               Alignm E-value:
               1.96182e-44
               

               Alignm gaps (pig, cow):
               34, 0
               

               Conread position:
               265-730
               

               Cow position:
               chr5:30844874-30845323 (view UCSC Genome Browser custom track)
               

               Alignm length:
               471
               

               Alignm identity:
               336
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               105, 18
               

               Conread position:
               265-736
               

               Cow position:
               chr5:40109263-40109707 (view UCSC Genome Browser custom track)
               

               Alignm length:
               475
               

               Alignm identity:
               324
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               112, 34
               

               Conread position:
               265-741
               

               Cow position:
               chr5:54086302-54086784 (view UCSC Genome Browser custom track)
               

               Alignm length:
               500
               

               Alignm identity:
               339
               

               Alignm E-value:
               2.8026e-45
               

               Alignm gaps (pig, cow):
               130, 37
               

               Conread position:
               265-765
               

               Cow position:
               chr5:57074573-57074086 (view UCSC Genome Browser custom track)
               

               Alignm length:
               507
               

               Alignm identity:
               343
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               112, 34
               

               Conread position:
               266-584
               

               Cow position:
               chr5:58229466-58229772 (view UCSC Genome Browser custom track)
               

               Alignm length:
               322
               

               Alignm identity:
               228
               

               Alignm E-value:
               6.00036e-42
               

               Alignm gaps (pig, cow):
               146, 98
               

               Conread position:
               266-741
               

               Cow position:
               chr5:37646789-37646296 (view UCSC Genome Browser custom track)
               

               Alignm length:
               500
               

               Alignm identity:
               347
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               90, 33
               

               Conread position:
               266-746
               

               Cow position:
               chr5:20127817-20128287 (view UCSC Genome Browser custom track)
               

               Alignm length:
               486
               

               Alignm identity:
               352
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               115, 36
               

               Conread position:
               266-763
               

               Cow position:
               chr5:55967120-55966627 (view UCSC Genome Browser custom track)
               

               Alignm length:
               510
               

               Alignm identity:
               347
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               109, 33
               

               Conread position:
               266-778
               

               Cow position:
               chr5:72903461-72902976 (view UCSC Genome Browser custom track)
               

               Alignm length:
               516
               

               Alignm identity:
               349
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               182, 28
               

               Conread position:
               267-567
               

               Cow position:
               chr5:34885392-34885104 (view UCSC Genome Browser custom track)
               

               Alignm length:
               301
               

               Alignm identity:
               210
               

               Alignm E-value:
               1e-38
               

               Alignm gaps (pig, cow):
               35, 0
               

               Conread position:
               268-741
               

               Cow position:
               chr5:41164853-41165310 (view UCSC Genome Browser custom track)
               

               Alignm length:
               482
               

               Alignm identity:
               350
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               79, 31
               

               Conread position:
               269-557
               

               Cow position:
               chr5:56135203-56134916 (view UCSC Genome Browser custom track)
               

               Alignm length:
               292
               

               Alignm identity:
               218
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               191, 33
               

               Conread position:
               269-741
               

               Cow position:
               chr5:28324111-28324587 (view UCSC Genome Browser custom track)
               

               Alignm length:
               492
               

               Alignm identity:
               349
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               80, 30
               

               Conread position:
               270-451
               

               Cow position:
               chr5:2851081-2851262 (view UCSC Genome Browser custom track)
               

               Alignm length:
               186
               

               Alignm identity:
               148
               

               Alignm E-value:
               1e-37
               

               Alignm gaps (pig, cow):
               101, 32
               

               Conread position:
               270-748
               

               Cow position:
               chr5:5257531-5257053 (view UCSC Genome Browser custom track)
               

               Alignm length:
               495
               

               Alignm identity:
               350
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               9, 30
               

               Conread position:
               273-746
               

               Cow position:
               chr5:56070623-56071091 (view UCSC Genome Browser custom track)
               

               Alignm length:
               482
               

               Alignm identity:
               325
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               21, 32
               

               Conread position:
               274-543
               

               Cow position:
               chr5:45036791-45037057 (view UCSC Genome Browser custom track)
               

               Alignm length:
               272
               

               Alignm identity:
               207
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               182, 15
               

               Conread position:
               274-591
               

               Cow position:
               chr5:46122578-46122270 (view UCSC Genome Browser custom track)
               

               Alignm length:
               321
               

               Alignm identity:
               229
               

               Alignm E-value:
               1.99965e-42
               

               Alignm gaps (pig, cow):
               81, 24
               

               Conread position:
               274-712
               

               Cow position:
               chr5:54350590-54350172 (view UCSC Genome Browser custom track)
               

               Alignm length:
               444
               

               Alignm identity:
               318
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               138, 25
               

               Conread position:
               274-714
               

               Cow position:
               chr5:12709657-12710091 (view UCSC Genome Browser custom track)
               

               Alignm length:
               445
               

               Alignm identity:
               317
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               152, 28
               

               Conread position:
               274-721
               

               Cow position:
               chr5:29353358-29352924 (view UCSC Genome Browser custom track)
               

               Alignm length:
               460
               

               Alignm identity:
               316
               

               Alignm E-value:
               1.4013e-45
               

               Alignm gaps (pig, cow):
               99, 31
               

               Conread position:
               274-725
               

               Cow position:
               chr5:64137022-64137470 (view UCSC Genome Browser custom track)
               

               Alignm length:
               456
               

               Alignm identity:
               311
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               133, 25
               

               Conread position:
               274-728
               

               Cow position:
               chr5:17063323-17062864 (view UCSC Genome Browser custom track)
               

               Alignm length:
               472
               

               Alignm identity:
               325
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               96, 25
               

               Conread position:
               274-736
               

               Cow position:
               chr5:30253516-30253963 (view UCSC Genome Browser custom track)
               

               Alignm length:
               464
               

               Alignm identity:
               323
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               182, 28
               

               Conread position:
               274-739
               

               Cow position:
               chr5:32339204-32338735 (view UCSC Genome Browser custom track)
               

               Alignm length:
               483
               

               Alignm identity:
               319
               

               Alignm E-value:
               5.99756e-43
               

               Alignm gaps (pig, cow):
               107, 28
               

               Conread position:
               274-743
               

               Cow position:
               chr5:22243014-22242544 (view UCSC Genome Browser custom track)
               

               Alignm length:
               489
               

               Alignm identity:
               336
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               101, 25
               

               Conread position:
               274-744
               

               Cow position:
               chr5:24996453-24995989 (view UCSC Genome Browser custom track)
               

               Alignm length:
               479
               

               Alignm identity:
               317
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               101, 25
               

               Conread position:
               274-747
               

               Cow position:
               chr5:3771617-3772076 (view UCSC Genome Browser custom track)
               

               Alignm length:
               477
               

               Alignm identity:
               338
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               132, 25
               

               Conread position:
               274-747
               

               Cow position:
               chr5:43992096-43992582 (view UCSC Genome Browser custom track)
               

               Alignm length:
               498
               

               Alignm identity:
               349
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               115, 25
               

               Conread position:
               274-765
               

               Cow position:
               chr5:36868516-36868989 (view UCSC Genome Browser custom track)
               

               Alignm length:
               499
               

               Alignm identity:
               360
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               220, 25
               

               Conread position:
               275-466
               

               Cow position:
               chr5:24642950-24642766 (view UCSC Genome Browser custom track)
               

               Alignm length:
               193
               

               Alignm identity:
               152
               

               Alignm E-value:
               1e-36
               

               Alignm gaps (pig, cow):
               181, 24
               

               Conread position:
               275-506
               

               Cow position:
               chr5:37714133-37713898 (view UCSC Genome Browser custom track)
               

               Alignm length:
               242
               

               Alignm identity:
               177
               

               Alignm E-value:
               2e-31
               

               Alignm gaps (pig, cow):
               70, 24
               

               Conread position:
               275-727
               

               Cow position:
               chr5:65765340-65764914 (view UCSC Genome Browser custom track)
               

               Alignm length:
               457
               

               Alignm identity:
               304
               

               Alignm E-value:
               1e-38
               

               Alignm gaps (pig, cow):
               148, 24
               

               Conread position:
               275-747
               

               Cow position:
               chr5:16938236-16937800 (view UCSC Genome Browser custom track)
               

               Alignm length:
               473
               

               Alignm identity:
               343
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               24, 0
               

               Conread position:
               276-505
               

               Cow position:
               chr5:32963856-32963633 (view UCSC Genome Browser custom track)
               

               Alignm length:
               231
               

               Alignm identity:
               181
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               113, 25
               

               Conread position:
               276-579
               

               Cow position:
               chr5:56820487-56820190 (view UCSC Genome Browser custom track)
               

               Alignm length:
               307
               

               Alignm identity:
               246
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               180, 23
               

               Conread position:
               277-512
               

               Cow position:
               chr5:18090501-18090729 (view UCSC Genome Browser custom track)
               

               Alignm length:
               237
               

               Alignm identity:
               178
               

               Alignm E-value:
               2e-40
               

               Alignm gaps (pig, cow):
               183, 22
               

               Conread position:
               277-598
               

               Cow position:
               chr5:7723446-7723755 (view UCSC Genome Browser custom track)
               

               Alignm length:
               323
               

               Alignm identity:
               229
               

               Alignm E-value:
               1.96182e-44
               

               Alignm gaps (pig, cow):
               244, 27
               

               Conread position:
               279-589
               

               Cow position:
               chr5:42744573-42744867 (view UCSC Genome Browser custom track)
               

               Alignm length:
               313
               

               Alignm identity:
               228
               

               Alignm E-value:
               2.8026e-45
               

               Alignm gaps (pig, cow):
               177, 20
               

               Conread position:
               281-433
               

               Cow position:
               chr5:36479763-36479611 (view UCSC Genome Browser custom track)
               

               Alignm length:
               157
               

               Alignm identity:
               124
               

               Alignm E-value:
               1e-27
               

               Alignm gaps (pig, cow):
               94, 18
               

               Conread position:
               282-764
               

               Cow position:
               chr5:40152254-40152738 (view UCSC Genome Browser custom track)
               

               Alignm length:
               493
               

               Alignm identity:
               325
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               17, 24
               

               Conread position:
               282-766
               

               Cow position:
               chr5:16025682-16025230 (view UCSC Genome Browser custom track)
               

               Alignm length:
               490
               

               Alignm identity:
               334
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               95, 17
               

               Conread position:
               283-761
               

               Cow position:
               chr5:11427463-11426987 (view UCSC Genome Browser custom track)
               

               Alignm length:
               487
               

               Alignm identity:
               345
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               92, 8
               

               Conread position:
               285-598
               

               Cow position:
               chr5:40039994-40039676 (view UCSC Genome Browser custom track)
               

               Alignm length:
               325
               

               Alignm identity:
               237
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               25, 113
               

               Conread position:
               285-598
               

               Cow position:
               chr5:62142452-62142766 (view UCSC Genome Browser custom track)
               

               Alignm length:
               320
               

               Alignm identity:
               255
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               171, 13
               

               Conread position:
               286-499
               

               Cow position:
               chr5:57271483-57271273 (view UCSC Genome Browser custom track)
               

               Alignm length:
               217
               

               Alignm identity:
               174
               

               Alignm E-value:
               1.4013e-45
               

               Alignm gaps (pig, cow):
               72, 13
               

               Conread position:
               289-766
               

               Cow position:
               chr5:35235923-35235433 (view UCSC Genome Browser custom track)
               

               Alignm length:
               499
               

               Alignm identity:
               349
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               167, 10
               

               Conread position:
               294-598
               

               Cow position:
               chr5:71494605-71494911 (view UCSC Genome Browser custom track)
               

               Alignm length:
               309
               

               Alignm identity:
               223
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               49, 170
               

               Conread position:
               295-598
               

               Cow position:
               chr5:47547927-47547633 (view UCSC Genome Browser custom track)
               

               Alignm length:
               305
               

               Alignm identity:
               227
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               161, 25
               

               Conread position:
               295-746
               

               Cow position:
               chr5:26262884-26262453 (view UCSC Genome Browser custom track)
               

               Alignm length:
               459
               

               Alignm identity:
               325
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               80, 44
               

               Conread position:
               295-747
               

               Cow position:
               chr5:35969332-35969773 (view UCSC Genome Browser custom track)
               

               Alignm length:
               459
               

               Alignm identity:
               335
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               161, 126
               

               Conread position:
               296-562
               

               Cow position:
               chr5:29212739-29212998 (view UCSC Genome Browser custom track)
               

               Alignm length:
               269
               

               Alignm identity:
               198
               

               Alignm E-value:
               1.99993e-41
               

               Alignm gaps (pig, cow):
               160, 68
               

               Conread position:
               297-567
               

               Cow position:
               chr5:3639689-3639428 (view UCSC Genome Browser custom track)
               

               Alignm length:
               273
               

               Alignm identity:
               193
               

               Alignm E-value:
               7e-34
               

               Alignm gaps (pig, cow):
               9, 34
               

               Conread position:
               299-498
               

               Cow position:
               chr5:72845979-72845788 (view UCSC Genome Browser custom track)
               

               Alignm length:
               202
               

               Alignm identity:
               148
               

               Alignm E-value:
               1e-25
               

               Alignm gaps (pig, cow):
               157, 59
               

               Conread position:
               299-763
               

               Cow position:
               chr5:51053854-51053400 (view UCSC Genome Browser custom track)
               

               Alignm length:
               475
               

               Alignm identity:
               335
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               247, 122
               

               Conread position:
               299-769
               

               Cow position:
               chr5:44049496-44049955 (view UCSC Genome Browser custom track)
               

               Alignm length:
               474
               

               Alignm identity:
               314
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               124, 65
               

               Conread position:
               302-598
               

               Cow position:
               chr5:22643422-22643142 (view UCSC Genome Browser custom track)
               

               Alignm length:
               299
               

               Alignm identity:
               218
               

               Alignm E-value:
               4.99997e-41
               

               Alignm gaps (pig, cow):
               7, 123
               

               Conread position:
               302-742
               

               Cow position:
               chr5:7044914-7044477 (view UCSC Genome Browser custom track)
               

               Alignm length:
               448
               

               Alignm identity:
               312
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               5, 16
               

               Conread position:
               302-800
               

               Cow position:
               chr5:34977039-34976556 (view UCSC Genome Browser custom track)
               

               Alignm length:
               502
               

               Alignm identity:
               329
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               157, 7
               

               Conread position:
               303-761
               

               Cow position:
               chr5:45409123-45409574 (view UCSC Genome Browser custom track)
               

               Alignm length:
               465
               

               Alignm identity:
               314
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               26, 78
               

               Conread position:
               304-606
               

               Cow position:
               chr5:9390334-9390651 (view UCSC Genome Browser custom track)
               

               Alignm length:
               320
               

               Alignm identity:
               225
               

               Alignm E-value:
               1e-38
               

               Alignm gaps (pig, cow):
               71, 122
               

               Conread position:
               305-494
               

               Cow position:
               chr5:56518410-56518222 (view UCSC Genome Browser custom track)
               

               Alignm length:
               191
               

               Alignm identity:
               148
               

               Alignm E-value:
               4e-38
               

               Alignm gaps (pig, cow):
               151, 116
               

               Conread position:
               309-580
               

               Cow position:
               chr5:75230487-75230739 (view UCSC Genome Browser custom track)
               

               Alignm length:
               272
               

               Alignm identity:
               200
               

               Alignm E-value:
               4e-38
               

               Alignm gaps (pig, cow):
               54, 0
               

               Conread position:
               309-598
               

               Cow position:
               chr5:69731321-69731590 (view UCSC Genome Browser custom track)
               

               Alignm length:
               292
               

               Alignm identity:
               206
               

               Alignm E-value:
               5e-30
               

               Alignm gaps (pig, cow):
               147, 55
               

               Conread position:
               310-764
               

               Cow position:
               chr5:50943349-50942906 (view UCSC Genome Browser custom track)
               

               Alignm length:
               469
               

               Alignm identity:
               325
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               65, 115
               

               Conread position:
               311-571
               

               Cow position:
               chr5:1678204-1678455 (view UCSC Genome Browser custom track)
               

               Alignm length:
               264
               

               Alignm identity:
               193
               

               Alignm E-value:
               4e-38
               

               Alignm gaps (pig, cow):
               7, 55
               

               Conread position:
               311-598
               

               Cow position:
               chr5:8163018-8162728 (view UCSC Genome Browser custom track)
               

               Alignm length:
               293
               

               Alignm identity:
               194
               

               Alignm E-value:
               4e-29
               

               Alignm gaps (pig, cow):
               54, 75
               

               Conread position:
               312-632
               

               Cow position:
               chr5:50215752-50215432 (view UCSC Genome Browser custom track)
               

               Alignm length:
               331
               

               Alignm identity:
               240
               

               Alignm E-value:
               1.4013e-45
               

               Alignm gaps (pig, cow):
               63, 21
               

               Conread position:
               315-598
               

               Cow position:
               chr5:4220790-4221068 (view UCSC Genome Browser custom track)
               

               Alignm length:
               290
               

               Alignm identity:
               218
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               60, 110
               

               Conread position:
               315-760
               

               Cow position:
               chr5:4322220-4322661 (view UCSC Genome Browser custom track)
               

               Alignm length:
               461
               

               Alignm identity:
               308
               

               Alignm E-value:
               1e-39
               

               Alignm gaps (pig, cow):
               60, 122
               

               Conread position:
               315-765
               

               Cow position:
               chr5:17371891-17371443 (view UCSC Genome Browser custom track)
               

               Alignm length:
               461
               

               Alignm identity:
               298
               

               Alignm E-value:
               1e-36
               

               Alignm gaps (pig, cow):
               141, 17
               

               Conread position:
               315-773
               

               Cow position:
               chr5:69461144-69461593 (view UCSC Genome Browser custom track)
               

               Alignm length:
               468
               

               Alignm identity:
               317
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               141, 106
               

               Conread position:
               316-761
               

               Cow position:
               chr5:1987426-1987861 (view UCSC Genome Browser custom track)
               

               Alignm length:
               457
               

               Alignm identity:
               297
               

               Alignm E-value:
               7e-33
               

               Alignm gaps (pig, cow):
               18, 91
               

               Conread position:
               316-765
               

               Cow position:
               chr5:30178700-30178250 (view UCSC Genome Browser custom track)
               

               Alignm length:
               457
               

               Alignm identity:
               311
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               61, 168
               

               Conread position:
               319-546
               

               Cow position:
               chr5:17644842-17644616 (view UCSC Genome Browser custom track)
               

               Alignm length:
               229
               

               Alignm identity:
               176
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               137, 104
               

               Conread position:
               320-599
               

               Cow position:
               chr5:62638720-62638995 (view UCSC Genome Browser custom track)
               

               Alignm length:
               287
               

               Alignm identity:
               194
               

               Alignm E-value:
               1e-25
               

               Alignm gaps (pig, cow):
               40, 89
               

               Conread position:
               321-499
               

               Cow position:
               chr5:30561535-30561714 (view UCSC Genome Browser custom track)
               

               Alignm length:
               183
               

               Alignm identity:
               135
               

               Alignm E-value:
               1e-27
               

               Alignm gaps (pig, cow):
               95, 27
               

               Conread position:
               321-767
               

               Cow position:
               chr5:46512951-46512513 (view UCSC Genome Browser custom track)
               

               Alignm length:
               455
               

               Alignm identity:
               299
               

               Alignm E-value:
               4.99997e-41
               

               Alignm gaps (pig, cow):
               54, 104
               

               Conread position:
               322-598
               

               Cow position:
               chr5:37808848-37808573 (view UCSC Genome Browser custom track)
               

               Alignm length:
               283
               

               Alignm identity:
               207
               

               Alignm E-value:
               1.99965e-42
               

               Alignm gaps (pig, cow):
               134, 60
               

               Conread position:
               323-598
               

               Cow position:
               chr5:47323268-47323552 (view UCSC Genome Browser custom track)
               

               Alignm length:
               290
               

               Alignm identity:
               218
               

               Alignm E-value:
               2.8026e-45
               

               Alignm gaps (pig, cow):
               37, 181
               

               Conread position:
               324-763
               

               Cow position:
               chr5:71722879-71723327 (view UCSC Genome Browser custom track)
               

               Alignm length:
               454
               

               Alignm identity:
               303
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               41, 289
               

               Conread position:
               326-454
               

               Cow position:
               chr5:23913907-23914040 (view UCSC Genome Browser custom track)
               

               Alignm length:
               134
               

               Alignm identity:
               103
               

               Alignm E-value:
               2e-21
               

               Alignm gaps (pig, cow):
               49, 0
               

               Conread position:
               327-598
               

               Cow position:
               chr5:7552597-7552326 (view UCSC Genome Browser custom track)
               

               Alignm length:
               275
               

               Alignm identity:
               182
               

               Alignm E-value:
               4e-27
               

               Alignm gaps (pig, cow):
               115, 96
               

               Conread position:
               328-673
               

               Cow position:
               chr5:28957794-28957440 (view UCSC Genome Browser custom track)
               

               Alignm length:
               362
               

               Alignm identity:
               246
               

               Alignm E-value:
               9e-36
               

               Alignm gaps (pig, cow):
               47, 142
               

               Conread position:
               329-550
               

               Cow position:
               chr5:42705088-42705303 (view UCSC Genome Browser custom track)
               

               Alignm length:
               222
               

               Alignm identity:
               162
               

               Alignm E-value:
               7e-34
               

               Alignm gaps (pig, cow):
               95, 0
               

               Conread position:
               329-645
               

               Cow position:
               chr5:51935006-51935330 (view UCSC Genome Browser custom track)
               

               Alignm length:
               331
               

               Alignm identity:
               235
               

               Alignm E-value:
               2e-40
               

               Alignm gaps (pig, cow):
               42, 173
               

               Conread position:
               329-767
               

               Cow position:
               chr5:57266074-57265646 (view UCSC Genome Browser custom track)
               

               Alignm length:
               451
               

               Alignm identity:
               302
               

               Alignm E-value:
               4e-39
               

               Alignm gaps (pig, cow):
               46, 115
               

               Conread position:
               330-617
               

               Cow position:
               chr5:69520715-69520998 (view UCSC Genome Browser custom track)
               

               Alignm length:
               291
               

               Alignm identity:
               199
               

               Alignm E-value:
               7e-34
               

               Alignm gaps (pig, cow):
               44, 94
               

               Conread position:
               330-740
               

               Cow position:
               chr5:19778759-19778339 (view UCSC Genome Browser custom track)
               

               Alignm length:
               427
               

               Alignm identity:
               272
               

               Alignm E-value:
               1e-28
               

               Alignm gaps (pig, cow):
               41, 98
               

               Conread position:
               331-474
               

               Cow position:
               chr5:45026092-45025950 (view UCSC Genome Browser custom track)
               

               Alignm length:
               144
               

               Alignm identity:
               121
               

               Alignm E-value:
               3e-36
               

               Alignm gaps (pig, cow):
               91, 0
               

               Conread position:
               331-563
               

               Cow position:
               chr5:29980160-29979927 (view UCSC Genome Browser custom track)
               

               Alignm length:
               240
               

               Alignm identity:
               171
               

               Alignm E-value:
               5e-30
               

               Alignm gaps (pig, cow):
               44, 99
               

               Conread position:
               331-745
               

               Cow position:
               chr5:52667853-52668271 (view UCSC Genome Browser custom track)
               

               Alignm length:
               430
               

               Alignm identity:
               282
               

               Alignm E-value:
               3e-36
               

               Alignm gaps (pig, cow):
               44, 20
               

               Conread position:
               332-720
               

               Cow position:
               chr5:41713136-41713495 (view UCSC Genome Browser custom track)
               

               Alignm length:
               390
               

               Alignm identity:
               269
               

               Alignm E-value:
               4e-38
               

               Alignm gaps (pig, cow):
               171, 26
               

               Conread position:
               335-745
               

               Cow position:
               chr5:55955735-55956142 (view UCSC Genome Browser custom track)
               

               Alignm length:
               418
               

               Alignm identity:
               293
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               50, 88
               

               Conread position:
               335-776
               

               Cow position:
               chr5:56014564-56014983 (view UCSC Genome Browser custom track)
               

               Alignm length:
               443
               

               Alignm identity:
               288
               

               Alignm E-value:
               3e-35
               

               Alignm gaps (pig, cow):
               162, 92
               

               Conread position:
               336-746
               

               Cow position:
               chr5:41010166-41009777 (view UCSC Genome Browser custom track)
               

               Alignm length:
               415
               

               Alignm identity:
               269
               

               Alignm E-value:
               4e-28
               

               Alignm gaps (pig, cow):
               34, 89
               

               Conread position:
               336-759
               

               Cow position:
               chr5:30092799-30092382 (view UCSC Genome Browser custom track)
               

               Alignm length:
               437
               

               Alignm identity:
               287
               

               Alignm E-value:
               2e-32
               

               Alignm gaps (pig, cow):
               34, 162
               

               Conread position:
               337-725
               

               Cow position:
               chr5:64697612-64698000 (view UCSC Genome Browser custom track)
               

               Alignm length:
               397
               

               Alignm identity:
               257
               

               Alignm E-value:
               7e-34
               

               Alignm gaps (pig, cow):
               38, 124
               

               Conread position:
               338-598
               

               Cow position:
               chr5:30950087-30949825 (view UCSC Genome Browser custom track)
               

               Alignm length:
               267
               

               Alignm identity:
               199
               

               Alignm E-value:
               8.40779e-45
               

               Alignm gaps (pig, cow):
               38, 87
               

               Conread position:
               339-489
               

               Cow position:
               chr5:24616289-24616132 (view UCSC Genome Browser custom track)
               

               Alignm length:
               158
               

               Alignm identity:
               118
               

               Alignm E-value:
               2e-21
               

               Alignm gaps (pig, cow):
               36, 0
               

               Conread position:
               339-740
               

               Cow position:
               chr5:30629324-30628926 (view UCSC Genome Browser custom track)
               

               Alignm length:
               406
               

               Alignm identity:
               273
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               117, 82
               

               Conread position:
               341-598
               

               Cow position:
               chr5:14629980-14629720 (view UCSC Genome Browser custom track)
               

               Alignm length:
               265
               

               Alignm identity:
               184
               

               Alignm E-value:
               2e-30
               

               Alignm gaps (pig, cow):
               34, 23
               

               Conread position:
               341-737
               

               Cow position:
               chr5:11540208-11539828 (view UCSC Genome Browser custom track)
               

               Alignm length:
               401
               

               Alignm identity:
               280
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               115, 24
               

               Conread position:
               342-645
               

               Cow position:
               chr5:62985353-62985671 (view UCSC Genome Browser custom track)
               

               Alignm length:
               324
               

               Alignm identity:
               234
               

               Alignm E-value:
               2e-40
               

               Alignm gaps (pig, cow):
               33, 118
               

               Conread position:
               342-673
               

               Cow position:
               chr5:54060110-54060450 (view UCSC Genome Browser custom track)
               

               Alignm length:
               346
               

               Alignm identity:
               234
               

               Alignm E-value:
               7e-33
               

               Alignm gaps (pig, cow):
               35, 84
               

               Conread position:
               343-584
               

               Cow position:
               chr5:21920205-21920456 (view UCSC Genome Browser custom track)
               

               Alignm length:
               253
               

               Alignm identity:
               191
               

               Alignm E-value:
               1.99965e-42
               

               Alignm gaps (pig, cow):
               32, 230
               

               Conread position:
               344-746
               

               Cow position:
               chr5:66972267-66972663 (view UCSC Genome Browser custom track)
               

               Alignm length:
               412
               

               Alignm identity:
               294
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               112, 18
               

               Conread position:
               345-550
               

               Cow position:
               chr5:71579013-71579218 (view UCSC Genome Browser custom track)
               

               Alignm length:
               209
               

               Alignm identity:
               159
               

               Alignm E-value:
               1e-36
               

               Alignm gaps (pig, cow):
               20, 78
               

               Conread position:
               345-727
               

               Cow position:
               chr5:45397418-45397779 (view UCSC Genome Browser custom track)
               

               Alignm length:
               385
               

               Alignm identity:
               256
               

               Alignm E-value:
               7e-33
               

               Alignm gaps (pig, cow):
               163, 76
               

               Conread position:
               345-740
               

               Cow position:
               chr5:66581803-66582197 (view UCSC Genome Browser custom track)
               

               Alignm length:
               405
               

               Alignm identity:
               282
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               111, 146
               

               Conread position:
               347-598
               

               Cow position:
               chr5:53710852-53710599 (view UCSC Genome Browser custom track)
               

               Alignm length:
               256
               

               Alignm identity:
               171
               

               Alignm E-value:
               3e-26
               

               Alignm gaps (pig, cow):
               37, 42
               

               Conread position:
               347-767
               

               Cow position:
               chr5:44673525-44673959 (view UCSC Genome Browser custom track)
               

               Alignm length:
               441
               

               Alignm identity:
               282
               

               Alignm E-value:
               4e-28
               

               Alignm gaps (pig, cow):
               28, 81
               

               Conread position:
               350-579
               

               Cow position:
               chr5:55750407-55750193 (view UCSC Genome Browser custom track)
               

               Alignm length:
               231
               

               Alignm identity:
               162
               

               Alignm E-value:
               2e-23
               

               Alignm gaps (pig, cow):
               106, 116
               

               Conread position:
               350-748
               

               Cow position:
               chr5:42050392-42050779 (view UCSC Genome Browser custom track)
               

               Alignm length:
               406
               

               Alignm identity:
               261
               

               Alignm E-value:
               3e-26
               

               Alignm gaps (pig, cow):
               23, 79
               

               Conread position:
               351-759
               

               Cow position:
               chr5:35247265-35246861 (view UCSC Genome Browser custom track)
               

               Alignm length:
               418
               

               Alignm identity:
               302
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               14, 72
               

               Conread position:
               352-533
               

               Cow position:
               chr5:44849876-44849706 (view UCSC Genome Browser custom track)
               

               Alignm length:
               183
               

               Alignm identity:
               137
               

               Alignm E-value:
               2e-23
               

               Alignm gaps (pig, cow):
               102, 34
               

               Conread position:
               354-745
               

               Cow position:
               chr5:12673611-12673248 (view UCSC Genome Browser custom track)
               

               Alignm length:
               392
               

               Alignm identity:
               252
               

               Alignm E-value:
               2e-23
               

               Alignm gaps (pig, cow):
               35, 0
               

               Conread position:
               354-760
               

               Cow position:
               chr5:61809835-61809451 (view UCSC Genome Browser custom track)
               

               Alignm length:
               409
               

               Alignm identity:
               266
               

               Alignm E-value:
               5e-31
               

               Alignm gaps (pig, cow):
               71, 8
               

               Conread position:
               355-466
               

               Cow position:
               chr5:61049205-61049324 (view UCSC Genome Browser custom track)
               

               Alignm length:
               120
               

               Alignm identity:
               98
               

               Alignm E-value:
               2e-21
               

               Alignm gaps (pig, cow):
               20, 0
               

               Conread position:
               355-744
               

               Cow position:
               chr5:7057550-7057166 (view UCSC Genome Browser custom track)
               

               Alignm length:
               398
               

               Alignm identity:
               277
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               70, 13
               

               Conread position:
               355-746
               

               Cow position:
               chr5:35459445-35459063 (view UCSC Genome Browser custom track)
               

               Alignm length:
               398
               

               Alignm identity:
               270
               

               Alignm E-value:
               6.00036e-42
               

               Alignm gaps (pig, cow):
               16, 33
               

               Conread position:
               356-545
               

               Cow position:
               chr5:41486890-41486700 (view UCSC Genome Browser custom track)
               

               Alignm length:
               192
               

               Alignm identity:
               140
               

               Alignm E-value:
               1e-29
               

               Alignm gaps (pig, cow):
               100, 139
               

               Conread position:
               356-736
               

               Cow position:
               chr5:12761265-12760897 (view UCSC Genome Browser custom track)
               

               Alignm length:
               386
               

               Alignm identity:
               266
               

               Alignm E-value:
               8.40779e-45
               

               Alignm gaps (pig, cow):
               67, 128
               

               Conread position:
               359-760
               

               Cow position:
               chr5:29097213-29097606 (view UCSC Genome Browser custom track)
               

               Alignm length:
               410
               

               Alignm identity:
               282
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               53, 140
               

               Conread position:
               360-463
               

               Cow position:
               chr5:54750691-54750794 (view UCSC Genome Browser custom track)
               

               Alignm length:
               105
               

               Alignm identity:
               88
               

               Alignm E-value:
               2e-22
               

               Alignm gaps (pig, cow):
               96, 62
               

               Conread position:
               360-571
               

               Cow position:
               chr5:50972385-50972593 (view UCSC Genome Browser custom track)
               

               Alignm length:
               214
               

               Alignm identity:
               150
               

               Alignm E-value:
               3e-26
               

               Alignm gaps (pig, cow):
               96, 108
               

               Conread position:
               360-598
               

               Cow position:
               chr5:65883921-65883682 (view UCSC Genome Browser custom track)
               

               Alignm length:
               242
               

               Alignm identity:
               170
               

               Alignm E-value:
               7e-33
               

               Alignm gaps (pig, cow):
               63, 131
               

               Conread position:
               361-757
               

               Cow position:
               chr5:49919782-49920167 (view UCSC Genome Browser custom track)
               

               Alignm length:
               400
               

               Alignm identity:
               262
               

               Alignm E-value:
               8e-35
               

               Alignm gaps (pig, cow):
               95, 18
               

               Conread position:
               363-507
               

               Cow position:
               chr5:19294628-19294487 (view UCSC Genome Browser custom track)
               

               Alignm length:
               147
               

               Alignm identity:
               115
               

               Alignm E-value:
               9e-25
               

               Alignm gaps (pig, cow):
               93, 35
               

               Conread position:
               363-547
               

               Cow position:
               chr5:7921542-7921365 (view UCSC Genome Browser custom track)
               

               Alignm length:
               186
               

               Alignm identity:
               143
               

               Alignm E-value:
               5e-31
               

               Alignm gaps (pig, cow):
               93, 60
               

               Conread position:
               364-598
               

               Cow position:
               chr5:38076623-38076393 (view UCSC Genome Browser custom track)
               

               Alignm length:
               241
               

               Alignm identity:
               169
               

               Alignm E-value:
               1e-25
               

               Alignm gaps (pig, cow):
               59, 21
               

               Conread position:
               366-598
               

               Cow position:
               chr5:14473554-14473314 (view UCSC Genome Browser custom track)
               

               Alignm length:
               243
               

               Alignm identity:
               180
               

               Alignm E-value:
               3e-37
               

               Alignm gaps (pig, cow):
               49, 23
               

               Conread position:
               367-579
               

               Cow position:
               chr5:25447426-25447635 (view UCSC Genome Browser custom track)
               

               Alignm length:
               217
               

               Alignm identity:
               155
               

               Alignm E-value:
               1e-26
               

               Alignm gaps (pig, cow):
               89, 19
               

               Conread position:
               369-608
               

               Cow position:
               chr5:67540339-67540103 (view UCSC Genome Browser custom track)
               

               Alignm length:
               242
               

               Alignm identity:
               171
               

               Alignm E-value:
               2e-32
               

               Alignm gaps (pig, cow):
               87, 52
               

               Conread position:
               369-743
               

               Cow position:
               chr5:73168134-73167785 (view UCSC Genome Browser custom track)
               

               Alignm length:
               376
               

               Alignm identity:
               256
               

               Alignm E-value:
               8e-35
               

               Alignm gaps (pig, cow):
               87, 20
               

               Conread position:
               371-730
               

               Cow position:
               chr5:54768044-54767666 (view UCSC Genome Browser custom track)
               

               Alignm length:
               382
               

               Alignm identity:
               264
               

               Alignm E-value:
               4.99997e-41
               

               Alignm gaps (pig, cow):
               85, 51
               

               Conread position:
               372-598
               

               Cow position:
               chr5:45273634-45273411 (view UCSC Genome Browser custom track)
               

               Alignm length:
               228
               

               Alignm identity:
               170
               

               Alignm E-value:
               5e-40
               

               Alignm gaps (pig, cow):
               82, 52
               

               Conread position:
               373-742
               

               Cow position:
               chr5:991334-991703 (view UCSC Genome Browser custom track)
               

               Alignm length:
               378
               

               Alignm identity:
               258
               

               Alignm E-value:
               2.00386e-43
               

               Alignm gaps (pig, cow):
               84, 48
               

               Conread position:
               373-756
               

               Cow position:
               chr5:57101908-57101556 (view UCSC Genome Browser custom track)
               

               Alignm length:
               385
               

               Alignm identity:
               255
               

               Alignm E-value:
               1e-28
               

               Alignm gaps (pig, cow):
               135, 80
               

               Conread position:
               374-673
               

               Cow position:
               chr5:63427137-63426834 (view UCSC Genome Browser custom track)
               

               Alignm length:
               308
               

               Alignm identity:
               208
               

               Alignm E-value:
               6e-32
               

               Alignm gaps (pig, cow):
               82, 25
               

               Conread position:
               374-751
               

               Cow position:
               chr5:64140399-64140777 (view UCSC Genome Browser custom track)
               

               Alignm length:
               389
               

               Alignm identity:
               266
               

               Alignm E-value:
               1.99993e-41
               

               Alignm gaps (pig, cow):
               49, 79
               

               Conread position:
               376-719
               

               Cow position:
               chr5:57419922-57419590 (view UCSC Genome Browser custom track)
               

               Alignm length:
               349
               

               Alignm identity:
               233
               

               Alignm E-value:
               6e-32
               

               Alignm gaps (pig, cow):
               80, 90
               

               Conread position:
               376-740
               

               Cow position:
               chr5:49474671-49474328 (view UCSC Genome Browser custom track)
               

               Alignm length:
               369
               

               Alignm identity:
               261
               

               Alignm E-value:
               1.99965e-42
               

               Alignm gaps (pig, cow):
               80, 15
               

               Conread position:
               377-598
               

               Cow position:
               chr5:58490589-58490819 (view UCSC Genome Browser custom track)
               

               Alignm length:
               232
               

               Alignm identity:
               163
               

               Alignm E-value:
               4e-27
               

               Alignm gaps (pig, cow):
               131, 47
               

               Conread position:
               378-599
               

               Cow position:
               chr5:60747403-60747189 (view UCSC Genome Browser custom track)
               

               Alignm length:
               223
               

               Alignm identity:
               153
               

               Alignm E-value:
               2e-23
               

               Alignm gaps (pig, cow):
               79, 21
               

               Conread position:
               378-757
               

               Cow position:
               chr5:18289002-18289362 (view UCSC Genome Browser custom track)
               

               Alignm length:
               382
               

               Alignm identity:
               270
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               78, 44
               

               Conread position:
               379-579
               

               Cow position:
               chr5:56680121-56680322 (view UCSC Genome Browser custom track)
               

               Alignm length:
               203
               

               Alignm identity:
               152
               

               Alignm E-value:
               9e-36
               

               Alignm gaps (pig, cow):
               75, 110
               

               Conread position:
               379-758
               

               Cow position:
               chr5:52126649-52127016 (view UCSC Genome Browser custom track)
               

               Alignm length:
               382
               

               Alignm identity:
               256
               

               Alignm E-value:
               4e-39
               

               Alignm gaps (pig, cow):
               44, 73
               

               Conread position:
               379-763
               

               Cow position:
               chr5:19335913-19335526 (view UCSC Genome Browser custom track)
               

               Alignm length:
               391
               

               Alignm identity:
               264
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               44, 224
               

               Conread position:
               381-555
               

               Cow position:
               chr5:60448090-60448263 (view UCSC Genome Browser custom track)
               

               Alignm length:
               177
               

               Alignm identity:
               134
               

               Alignm E-value:
               4e-29
               

               Alignm gaps (pig, cow):
               16, 42
               

               Conread position:
               382-598
               

               Cow position:
               chr5:19523775-19523990 (view UCSC Genome Browser custom track)
               

               Alignm length:
               220
               

               Alignm identity:
               164
               

               Alignm E-value:
               3e-36
               

               Alignm gaps (pig, cow):
               26, 5
               

               Conread position:
               385-742
               

               Cow position:
               chr5:59057871-59057517 (view UCSC Genome Browser custom track)
               

               Alignm length:
               369
               

               Alignm identity:
               244
               

               Alignm E-value:
               4e-29
               

               Alignm gaps (pig, cow):
               71, 89
               

               Conread position:
               386-740
               

               Cow position:
               chr5:57768103-57767761 (view UCSC Genome Browser custom track)
               

               Alignm length:
               360
               

               Alignm identity:
               247
               

               Alignm E-value:
               1e-37
               

               Alignm gaps (pig, cow):
               5, 39
               

               Conread position:
               386-743
               

               Cow position:
               chr5:16179644-16179293 (view UCSC Genome Browser custom track)
               

               Alignm length:
               373
               

               Alignm identity:
               262
               

               Alignm E-value:
               9e-36
               

               Alignm gaps (pig, cow):
               71, 37
               

               Conread position:
               388-794
               

               Cow position:
               chr5:33560851-33560462 (view UCSC Genome Browser custom track)
               

               Alignm length:
               408
               

               Alignm identity:
               270
               

               Alignm E-value:
               4e-39
               

               Alignm gaps (pig, cow):
               68, 34
               

               Conread position:
               390-740
               

               Cow position:
               chr5:12901800-12902146 (view UCSC Genome Browser custom track)
               

               Alignm length:
               356
               

               Alignm identity:
               252
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               66, 111
               

               Conread position:
               392-597
               

               Cow position:
               chr5:34192786-34192996 (view UCSC Genome Browser custom track)
               

               Alignm length:
               215
               

               Alignm identity:
               164
               

               Alignm E-value:
               7e-34
               

               Alignm gaps (pig, cow):
               31, 9
               

               Conread position:
               392-748
               

               Cow position:
               chr5:13717684-13717325 (view UCSC Genome Browser custom track)
               

               Alignm length:
               376
               

               Alignm identity:
               271
               

               Alignm E-value:
               1.96182e-44
               

               Alignm gaps (pig, cow):
               20, 105
               

               Conread position:
               393-745
               

               Cow position:
               chr5:71846036-71845694 (view UCSC Genome Browser custom track)
               

               Alignm length:
               360
               

               Alignm identity:
               247
               

               Alignm E-value:
               3e-36
               

               Alignm gaps (pig, cow):
               14, 184
               

               Conread position:
               393-747
               

               Cow position:
               chr5:60016055-60016398 (view UCSC Genome Browser custom track)
               

               Alignm length:
               356
               

               Alignm identity:
               227
               

               Alignm E-value:
               4e-27
               

               Alignm gaps (pig, cow):
               63, 28
               

               Conread position:
               393-748
               

               Cow position:
               chr5:58446691-58447063 (view UCSC Genome Browser custom track)
               

               Alignm length:
               376
               

               Alignm identity:
               256
               

               Alignm E-value:
               1e-37
               

               Alignm gaps (pig, cow):
               63, 32
               

               Conread position:
               394-730
               

               Cow position:
               chr5:53946782-53947116 (view UCSC Genome Browser custom track)
               

               Alignm length:
               339
               

               Alignm identity:
               228
               

               Alignm E-value:
               4.99997e-41
               

               Alignm gaps (pig, cow):
               62, 101
               

               Conread position:
               395-767
               

               Cow position:
               chr5:23678814-23678427 (view UCSC Genome Browser custom track)
               

               Alignm length:
               392
               

               Alignm identity:
               277
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               64, 99
               

               Conread position:
               396-598
               

               Cow position:
               chr5:35125945-35126145 (view UCSC Genome Browser custom track)
               

               Alignm length:
               205
               

               Alignm identity:
               154
               

               Alignm E-value:
               2e-34
               

               Alignm gaps (pig, cow):
               60, 9
               

               Conread position:
               398-598
               

               Cow position:
               chr5:56635793-56635985 (view UCSC Genome Browser custom track)
               

               Alignm length:
               202
               

               Alignm identity:
               146
               

               Alignm E-value:
               1e-25
               

               Alignm gaps (pig, cow):
               58, 24
               

               Conread position:
               398-765
               

               Cow position:
               chr5:43371305-43370941 (view UCSC Genome Browser custom track)
               

               Alignm length:
               372
               

               Alignm identity:
               254
               

               Alignm E-value:
               1.4013e-45
               

               Alignm gaps (pig, cow):
               27, 108
               

               Conread position:
               399-721
               

               Cow position:
               chr5:64168346-64168029 (view UCSC Genome Browser custom track)
               

               Alignm length:
               325
               

               Alignm identity:
               212
               

               Alignm E-value:
               5e-30
               

               Alignm gaps (pig, cow):
               24, 96
               

               Conread position:
               399-739
               

               Cow position:
               chr5:31475575-31475910 (view UCSC Genome Browser custom track)
               

               Alignm length:
               344
               

               Alignm identity:
               228
               

               Alignm E-value:
               2e-34
               

               Alignm gaps (pig, cow):
               24, 95
               

               Conread position:
               399-743
               

               Cow position:
               chr5:41293974-41294328 (view UCSC Genome Browser custom track)
               

               Alignm length:
               366
               

               Alignm identity:
               251
               

               Alignm E-value:
               5e-31
               

               Alignm gaps (pig, cow):
               57, 25
               

               Conread position:
               400-547
               

               Cow position:
               chr5:56469931-56469783 (view UCSC Genome Browser custom track)
               

               Alignm length:
               151
               

               Alignm identity:
               113
               

               Alignm E-value:
               2e-21
               

               Alignm gaps (pig, cow):
               56, 91
               

               Conread position:
               401-752
               

               Cow position:
               chr5:12557396-12557048 (view UCSC Genome Browser custom track)
               

               Alignm length:
               361
               

               Alignm identity:
               233
               

               Alignm E-value:
               1e-25
               

               Alignm gaps (pig, cow):
               55, 20
               

               Conread position:
               402-752
               

               Cow position:
               chr5:36039107-36038764 (view UCSC Genome Browser custom track)
               

               Alignm length:
               358
               

               Alignm identity:
               245
               

               Alignm E-value:
               1e-36
               

               Alignm gaps (pig, cow):
               105, 23
               

               Conread position:
               403-747
               

               Cow position:
               chr5:30232794-30233144 (view UCSC Genome Browser custom track)
               

               Alignm length:
               357
               

               Alignm identity:
               232
               

               Alignm E-value:
               3e-26
               

               Alignm gaps (pig, cow):
               20, 209
               

               Conread position:
               406-728
               

               Cow position:
               chr5:48867562-48867255 (view UCSC Genome Browser custom track)
               

               Alignm length:
               325
               

               Alignm identity:
               215
               

               Alignm E-value:
               1e-25
               

               Alignm gaps (pig, cow):
               70, 21
               

               Conread position:
               408-599
               

               Cow position:
               chr5:55019196-55019383 (view UCSC Genome Browser custom track)
               

               Alignm length:
               193
               

               Alignm identity:
               144
               

               Alignm E-value:
               5e-31
               

               Alignm gaps (pig, cow):
               48, 61
               

               Conread position:
               408-743
               

               Cow position:
               chr5:34923049-34922733 (view UCSC Genome Browser custom track)
               

               Alignm length:
               337
               

               Alignm identity:
               224
               

               Alignm E-value:
               1e-27
               

               Alignm gaps (pig, cow):
               48, 22
               

               Conread position:
               413-727
               

               Cow position:
               chr5:63234923-63234609 (view UCSC Genome Browser custom track)
               

               Alignm length:
               325
               

               Alignm identity:
               228
               

               Alignm E-value:
               3e-36
               

               Alignm gaps (pig, cow):
               22, 84
               

               Conread position:
               414-598
               

               Cow position:
               chr5:50575692-50575874 (view UCSC Genome Browser custom track)
               

               Alignm length:
               186
               

               Alignm identity:
               137
               

               Alignm E-value:
               4e-29
               

               Alignm gaps (pig, cow):
               42, 80
               

               Conread position:
               414-736
               

               Cow position:
               chr5:59384783-59384463 (view UCSC Genome Browser custom track)
               

               Alignm length:
               330
               

               Alignm identity:
               215
               

               Alignm E-value:
               9e-25
               

               Alignm gaps (pig, cow):
               42, 131
               

               Conread position:
               414-748
               

               Cow position:
               chr5:46129755-46129433 (view UCSC Genome Browser custom track)
               

               Alignm length:
               341
               

               Alignm identity:
               232
               

               Alignm E-value:
               5e-30
               

               Alignm gaps (pig, cow):
               11, 32
               

               Conread position:
               415-598
               

               Cow position:
               chr5:1087288-1087109 (view UCSC Genome Browser custom track)
               

               Alignm length:
               184
               

               Alignm identity:
               138
               

               Alignm E-value:
               6e-32
               

               Alignm gaps (pig, cow):
               78, 0
               

               Conread position:
               415-740
               

               Cow position:
               chr5:71015972-71015658 (view UCSC Genome Browser custom track)
               

               Alignm length:
               334
               

               Alignm identity:
               224
               

               Alignm E-value:
               8e-24
               

               Alignm gaps (pig, cow):
               41, 51
               

               Conread position:
               416-739
               

               Cow position:
               chr5:36650459-36650781 (view UCSC Genome Browser custom track)
               

               Alignm length:
               329
               

               Alignm identity:
               212
               

               Alignm E-value:
               1e-26
               

               Alignm gaps (pig, cow):
               40, 101
               

               Conread position:
               417-598
               

               Cow position:
               chr5:59873181-59872990 (view UCSC Genome Browser custom track)
               

               Alignm length:
               193
               

               Alignm identity:
               141
               

               Alignm E-value:
               8e-24
               

               Alignm gaps (pig, cow):
               39, 77
               

               Conread position:
               418-736
               

               Cow position:
               chr5:35229219-35228921 (view UCSC Genome Browser custom track)
               

               Alignm length:
               321
               

               Alignm identity:
               219
               

               Alignm E-value:
               4e-29
               

               Alignm gaps (pig, cow):
               38, 69
               

               Conread position:
               418-754
               

               Cow position:
               chr5:57527007-57526686 (view UCSC Genome Browser custom track)
               

               Alignm length:
               338
               

               Alignm identity:
               243
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               38, 76
               

               Conread position:
               419-739
               

               Cow position:
               chr5:43402812-43403135 (view UCSC Genome Browser custom track)
               

               Alignm length:
               332
               

               Alignm identity:
               228
               

               Alignm E-value:
               7e-33
               

               Alignm gaps (pig, cow):
               37, 217
               

               Conread position:
               419-745
               

               Cow position:
               chr5:41884848-41885146 (view UCSC Genome Browser custom track)
               

               Alignm length:
               330
               

               Alignm identity:
               233
               

               Alignm E-value:
               5e-31
               

               Alignm gaps (pig, cow):
               37, 77
               

               Conread position:
               424-746
               

               Cow position:
               chr5:61914487-61914804 (view UCSC Genome Browser custom track)
               

               Alignm length:
               330
               

               Alignm identity:
               224
               

               Alignm E-value:
               7e-33
               

               Alignm gaps (pig, cow):
               36, 74
               

               Conread position:
               424-771
               

               Cow position:
               chr5:50713854-50713490 (view UCSC Genome Browser custom track)
               

               Alignm length:
               370
               

               Alignm identity:
               241
               

               Alignm E-value:
               2e-23
               

               Alignm gaps (pig, cow):
               32, 218
               

               Conread position:
               425-767
               

               Cow position:
               chr5:65140205-65140557 (view UCSC Genome Browser custom track)
               

               Alignm length:
               365
               

               Alignm identity:
               251
               

               Alignm E-value:
               2e-32
               

               Alignm gaps (pig, cow):
               31, 71
               

               Conread position:
               428-757
               

               Cow position:
               chr5:19752226-19752544 (view UCSC Genome Browser custom track)
               

               Alignm length:
               333
               

               Alignm identity:
               234
               

               Alignm E-value:
               4.99997e-41
               

               Alignm gaps (pig, cow):
               28, 41
               

               Conread position:
               429-746
               

               Cow position:
               chr5:49668400-49668717 (view UCSC Genome Browser custom track)
               

               Alignm length:
               326
               

               Alignm identity:
               208
               

               Alignm E-value:
               2e-22
               

               Alignm gaps (pig, cow):
               27, 81
               

               Conread position:
               429-752
               

               Cow position:
               chr5:37893255-37893583 (view UCSC Genome Browser custom track)
               

               Alignm length:
               331
               

               Alignm identity:
               215
               

               Alignm E-value:
               5e-30
               

               Alignm gaps (pig, cow):
               27, 80
               

               Conread position:
               430-747
               

               Cow position:
               chr5:57756108-57755799 (view UCSC Genome Browser custom track)
               

               Alignm length:
               325
               

               Alignm identity:
               228
               

               Alignm E-value:
               1e-36
               

               Alignm gaps (pig, cow):
               27, 64
               

               Conread position:
               436-727
               

               Cow position:
               chr5:34109130-34108843 (view UCSC Genome Browser custom track)
               

               Alignm length:
               293
               

               Alignm identity:
               185
               

               Alignm E-value:
               6e-22
               

               Alignm gaps (pig, cow):
               20, 73
               

               Conread position:
               437-598
               

               Cow position:
               chr5:67212286-67212451 (view UCSC Genome Browser custom track)
               

               Alignm length:
               166
               

               Alignm identity:
               119
               

               Alignm E-value:
               2e-21
               

               Alignm gaps (pig, cow):
               19, 0
               

               Conread position:
               445-736
               

               Cow position:
               chr5:7012910-7012626 (view UCSC Genome Browser custom track)
               

               Alignm length:
               295
               

               Alignm identity:
               203
               

               Alignm E-value:
               2e-32
               

               Alignm gaps (pig, cow):
               11, 53
               

               Conread position:
               445-741
               

               Cow position:
               chr5:11769206-11769500 (view UCSC Genome Browser custom track)
               

               Alignm length:
               303
               

               Alignm identity:
               203
               

               Alignm E-value:
               4e-28
               

               Alignm gaps (pig, cow):
               11, 72
               

               Conread position:
               445-758
               

               Cow position:
               chr5:41935713-41935409 (view UCSC Genome Browser custom track)
               

               Alignm length:
               317
               

               Alignm identity:
               214
               

               Alignm E-value:
               2e-32
               

               Alignm gaps (pig, cow):
               148, 13
               

               Conread position:
               445-760
               

               Cow position:
               chr5:59627036-59626726 (view UCSC Genome Browser custom track)
               

               Alignm length:
               321
               

               Alignm identity:
               215
               

               Alignm E-value:
               2e-30
               

               Alignm gaps (pig, cow):
               11, 68
               

               Conread position:
               449-758
               

               Cow position:
               chr5:61455787-61456091 (view UCSC Genome Browser custom track)
               

               Alignm length:
               318
               

               Alignm identity:
               213
               

               Alignm E-value:
               3e-26
               

               Alignm gaps (pig, cow):
               7, 122
               

               Conread position:
               455-728
               

               Cow position:
               chr5:57156365-57156085 (view UCSC Genome Browser custom track)
               

               Alignm length:
               287
               

               Alignm identity:
               199
               

               Alignm E-value:
               4e-28
               

               Alignm gaps (pig, cow):
               66, 38
               

               Conread position:
               455-761
               

               Cow position:
               chr5:63240925-63241227 (view UCSC Genome Browser custom track)
               

               Alignm length:
               309
               

               Alignm identity:
               205
               

               Alignm E-value:
               6e-32
               

               Alignm gaps (pig, cow):
               51, 37
               

               Conread position:
               456-743
               

               Cow position:
               chr5:24136663-24136964 (view UCSC Genome Browser custom track)
               

               Alignm length:
               303
               

               Alignm identity:
               203
               

               Alignm E-value:
               3e-26
               

               Alignm gaps (pig, cow):
               41, 50
               

               Conread position:
               460-759
               

               Cow position:
               chr5:61784774-61784482 (view UCSC Genome Browser custom track)
               

               Alignm length:
               300
               

               Alignm identity:
               191
               

               Alignm E-value:
               2e-23
               

               Alignm gaps (pig, cow):
               33, 0
               

               Conread position:
               461-766
               

               Cow position:
               chr5:52001666-52001371 (view UCSC Genome Browser custom track)
               

               Alignm length:
               310
               

               Alignm identity:
               213
               

               Alignm E-value:
               7e-33
               

               Alignm gaps (pig, cow):
               139, 32
               

               Conread position:
               468-759
               

               Cow position:
               chr5:50101416-50101132 (view UCSC Genome Browser custom track)
               

               Alignm length:
               295
               

               Alignm identity:
               212
               

               Alignm E-value:
               1.99993e-41
               

               Alignm gaps (pig, cow):
               42, 29
               

               Conread position:
               469-727
               

               Cow position:
               chr5:49501862-49501604 (view UCSC Genome Browser custom track)
               

               Alignm length:
               263
               

               Alignm identity:
               181
               

               Alignm E-value:
               5e-31
               

               Alignm gaps (pig, cow):
               130, 24
               

               Conread position:
               473-752
               

               Cow position:
               chr5:33273657-33273937 (view UCSC Genome Browser custom track)
               

               Alignm length:
               288
               

               Alignm identity:
               198
               

               Alignm E-value:
               1e-29
               

               Alignm gaps (pig, cow):
               37, 100
               

               Conread position:
               478-747
               

               Cow position:
               chr5:52108295-52108024 (view UCSC Genome Browser custom track)
               

               Alignm length:
               277
               

               Alignm identity:
               193
               

               Alignm E-value:
               2e-31
               

               Alignm gaps (pig, cow):
               123, 19
               

               Conread position:
               481-760
               

               Cow position:
               chr5:26549167-26548896 (view UCSC Genome Browser custom track)
               

               Alignm length:
               281
               

               Alignm identity:
               191
               

               Alignm E-value:
               5e-31
               

               Alignm gaps (pig, cow):
               27, 12
               

               Conread position:
               481-762
               

               Cow position:
               chr5:17835187-17834909 (view UCSC Genome Browser custom track)
               

               Alignm length:
               284
               

               Alignm identity:
               186
               

               Alignm E-value:
               4e-27
               

               Alignm gaps (pig, cow):
               23, 130
               

               Conread position:
               483-744
               

               Cow position:
               chr5:49342074-49341805 (view UCSC Genome Browser custom track)
               

               Alignm length:
               273
               

               Alignm identity:
               181
               

               Alignm E-value:
               2e-21
               

               Alignm gaps (pig, cow):
               14, 23
               

               Conread position:
               484-723
               

               Cow position:
               chr5:58555112-58555366 (view UCSC Genome Browser custom track)
               

               Alignm length:
               255
               

               Alignm identity:
               178
               

               Alignm E-value:
               1e-26
               

               Alignm gaps (pig, cow):
               32, 0
               

               Conread position:
               484-740
               

               Cow position:
               chr5:56060091-56059837 (view UCSC Genome Browser custom track)
               

               Alignm length:
               259
               

               Alignm identity:
               169
               

               Alignm E-value:
               2e-23
               

               Alignm gaps (pig, cow):
               172, 19
               

               Conread position:
               484-741
               

               Cow position:
               chr5:56860423-56860671 (view UCSC Genome Browser custom track)
               

               Alignm length:
               259
               

               Alignm identity:
               172
               

               Alignm E-value:
               2e-21
               

               Alignm gaps (pig, cow):
               26, 17
               

               Conread position:
               484-765
               

               Cow position:
               chr5:2827352-2827626 (view UCSC Genome Browser custom track)
               

               Alignm length:
               284
               

               Alignm identity:
               185
               

               Alignm E-value:
               2e-22
               

               Alignm gaps (pig, cow):
               174, 21
               

               Conread position:
               488-722
               

               Cow position:
               chr5:25597817-25598038 (view UCSC Genome Browser custom track)
               

               Alignm length:
               235
               

               Alignm identity:
               162
               

               Alignm E-value:
               2e-23
               

               Alignm gaps (pig, cow):
               22, 0
               

               Conread position:
               496-757
               

               Cow position:
               chr5:69383243-69383495 (view UCSC Genome Browser custom track)
               

               Alignm length:
               262
               

               Alignm identity:
               179
               

               Alignm E-value:
               1e-29
               

               Alignm gaps (pig, cow):
               107, 0
               

               Conread position:
               496-766
               

               Cow position:
               chr5:5760327-5760056 (view UCSC Genome Browser custom track)
               

               Alignm length:
               275
               

               Alignm identity:
               188
               

               Alignm E-value:
               6e-32
               

               Alignm gaps (pig, cow):
               9, 127
               

               Conread position:
               500-764
               

               Cow position:
               chr5:57062537-57062278 (view UCSC Genome Browser custom track)
               

               Alignm length:
               268
               

               Alignm identity:
               182
               

               Alignm E-value:
               1e-27
               

               Alignm gaps (pig, cow):
               158, 103
               

               Conread position:
               501-727
               

               Cow position:
               chr5:25020774-25020542 (view UCSC Genome Browser custom track)
               

               Alignm length:
               234
               

               Alignm identity:
               161
               

               Alignm E-value:
               1e-25
               

               Alignm gaps (pig, cow):
               21, 28
               

               Conread position:
               505-764
               

               Cow position:
               chr5:60515031-60514774 (view UCSC Genome Browser custom track)
               

               Alignm length:
               265
               

               Alignm identity:
               180
               

               Alignm E-value:
               1e-26
               

               Alignm gaps (pig, cow):
               96, 133
               

               Conread position:
               506-740
               

               Cow position:
               chr5:67634519-67634281 (view UCSC Genome Browser custom track)
               

               Alignm length:
               241
               

               Alignm identity:
               161
               

               Alignm E-value:
               7e-23
               

               Alignm gaps (pig, cow):
               94, 148
               

               Conread position:
               506-742
               

               Cow position:
               chr5:2469209-2468984 (view UCSC Genome Browser custom track)
               

               Alignm length:
               237
               

               Alignm identity:
               161
               

               Alignm E-value:
               2e-23
               

               Alignm gaps (pig, cow):
               101, 0
               

               Conread position:
               506-744
               

               Cow position:
               chr5:6520009-6520236 (view UCSC Genome Browser custom track)
               

               Alignm length:
               241
               

               Alignm identity:
               172
               

               Alignm E-value:
               4e-29
               

               Alignm gaps (pig, cow):
               70, 99
               

               Conread position:
               507-752
               

               Cow position:
               chr5:58737759-58737517 (view UCSC Genome Browser custom track)
               

               Alignm length:
               247
               

               Alignm identity:
               166
               

               Alignm E-value:
               3e-26
               

               Alignm gaps (pig, cow):
               93, 123
               

               Conread position:
               508-736
               

               Cow position:
               chr5:44810239-44810014 (view UCSC Genome Browser custom track)
               

               Alignm length:
               230
               

               Alignm identity:
               153
               

               Alignm E-value:
               2e-22
               

               Alignm gaps (pig, cow):
               131, 94
               

               Conread position:
               509-746
               

               Cow position:
               chr5:61049333-61049567 (view UCSC Genome Browser custom track)
               

               Alignm length:
               241
               

               Alignm identity:
               173
               

               Alignm E-value:
               2e-32
               

               Alignm gaps (pig, cow):
               91, 119
               

               Conread position:
               510-768
               

               Cow position:
               chr5:12299913-12300163 (view UCSC Genome Browser custom track)
               

               Alignm length:
               264
               

               Alignm identity:
               180
               

               Alignm E-value:
               6e-22
               

               Alignm gaps (pig, cow):
               90, 114
               

               Conread position:
               517-772
               

               Cow position:
               chr5:7177160-7177409 (view UCSC Genome Browser custom track)
               

               Alignm length:
               259
               

               Alignm identity:
               176
               

               Alignm E-value:
               3e-25
               

               Alignm gaps (pig, cow):
               83, 118
               

               Conread position:
               522-744
               

               Cow position:
               chr5:65552697-65552491 (view UCSC Genome Browser custom track)
               

               Alignm length:
               223
               

               Alignm identity:
               158
               

               Alignm E-value:
               6e-21
               

               Alignm gaps (pig, cow):
               81, 0
               

               Conread position:
               530-740
               

               Cow position:
               chr5:17828457-17828250 (view UCSC Genome Browser custom track)
               

               Alignm length:
               215
               

               Alignm identity:
               152
               

               Alignm E-value:
               3e-25
               

               Alignm gaps (pig, cow):
               116, 72
               

               Conread position:
               532-765
               

               Cow position:
               chr5:48062093-48061856 (view UCSC Genome Browser custom track)
               

               Alignm length:
               241
               

               Alignm identity:
               172
               

               Alignm E-value:
               2e-31
               

               Alignm gaps (pig, cow):
               68, 134
               

               Conread position:
               534-753
               

               Cow position:
               chr5:16185404-16185623 (view UCSC Genome Browser custom track)
               

               Alignm length:
               226
               

               Alignm identity:
               157
               

               Alignm E-value:
               8e-24
               

               Alignm gaps (pig, cow):
               110, 63
               

               Conread position:
               537-763
               

               Cow position:
               chr5:62341057-62341281 (view UCSC Genome Browser custom track)
               

               Alignm length:
               233
               

               Alignm identity:
               161
               

               Alignm E-value:
               6e-22
               

               Alignm gaps (pig, cow):
               42, 32
               

               Conread position:
               537-767
               

               Cow position:
               chr5:58756377-58756150 (view UCSC Genome Browser custom track)
               

               Alignm length:
               233
               

               Alignm identity:
               160
               

               Alignm E-value:
               3e-26
               

               Alignm gaps (pig, cow):
               67, 82
               

               Conread position:
               539-727
               

               Cow position:
               chr5:53980723-53980538 (view UCSC Genome Browser custom track)
               

               Alignm length:
               193
               

               Alignm identity:
               140
               

               Alignm E-value:
               7e-23
               

               Alignm gaps (pig, cow):
               61, 85
               

               Conread position:
               539-734
               

               Cow position:
               chr5:44734694-44734506 (view UCSC Genome Browser custom track)
               

               Alignm length:
               197
               

               Alignm identity:
               143
               

               Alignm E-value:
               1e-25
               

               Alignm gaps (pig, cow):
               117, 61
               

               Conread position:
               539-761
               

               Cow position:
               chr5:49821459-49821679 (view UCSC Genome Browser custom track)
               

               Alignm length:
               226
               

               Alignm identity:
               163
               

               Alignm E-value:
               6e-32
               

               Alignm gaps (pig, cow):
               105, 64
               

               Conread position:
               539-795
               

               Cow position:
               chr5:62011714-62011962 (view UCSC Genome Browser custom track)
               

               Alignm length:
               261
               

               Alignm identity:
               181
               

               Alignm E-value:
               3e-26
               

               Alignm gaps (pig, cow):
               59, 85
               

               Conread position:
               540-759
               

               Cow position:
               chr5:40122578-40122364 (view UCSC Genome Browser custom track)
               

               Alignm length:
               222
               

               Alignm identity:
               152
               

               Alignm E-value:
               7e-23
               

               Alignm gaps (pig, cow):
               117, 62
               

               Conread position:
               541-740
               

               Cow position:
               chr5:12562727-12562533 (view UCSC Genome Browser custom track)
               

               Alignm length:
               202
               

               Alignm identity:
               144
               

               Alignm E-value:
               3e-24
               

               Alignm gaps (pig, cow):
               61, 72
               

               Conread position:
               544-767
               

               Cow position:
               chr5:44901545-44901771 (view UCSC Genome Browser custom track)
               

               Alignm length:
               230
               

               Alignm identity:
               155
               

               Alignm E-value:
               6e-21
               

               Alignm gaps (pig, cow):
               56, 199
               

               Conread position:
               544-770
               

               Cow position:
               chr5:20126939-20127166 (view UCSC Genome Browser custom track)
               

               Alignm length:
               233
               

               Alignm identity:
               159
               

               Alignm E-value:
               6e-22
               

               Alignm gaps (pig, cow):
               43, 70
               

               Conread position:
               544-770
               

               Cow position:
               chr5:54750843-54751068 (view UCSC Genome Browser custom track)
               

               Alignm length:
               233
               

               Alignm identity:
               160
               

               Alignm E-value:
               2e-22
               

               Alignm gaps (pig, cow):
               56, 95
               

               Conread position:
               545-746
               

               Cow position:
               chr5:39035817-39036015 (view UCSC Genome Browser custom track)
               

               Alignm length:
               205
               

               Alignm identity:
               145
               

               Alignm E-value:
               8e-24
               

               Alignm gaps (pig, cow):
               83, 58
               

               Conread position:
               549-747
               

               Cow position:
               chr5:24915486-24915291 (view UCSC Genome Browser custom track)
               

               Alignm length:
               202
               

               Alignm identity:
               140
               

               Alignm E-value:
               6e-22
               

               Alignm gaps (pig, cow):
               51, 90
               

               Conread position:
               549-758
               

               Cow position:
               chr5:6876927-6876720 (view UCSC Genome Browser custom track)
               

               Alignm length:
               212
               

               Alignm identity:
               146
               

               Alignm E-value:
               2e-23
               

               Alignm gaps (pig, cow):
               112, 32
               

               Conread position:
               551-770
               

               Cow position:
               chr5:24464789-24464994 (view UCSC Genome Browser custom track)
               

               Alignm length:
               221
               

               Alignm identity:
               157
               

               Alignm E-value:
               7e-23
               

               Alignm gaps (pig, cow):
               12, 38
               

               Conread position:
               563-744
               

               Cow position:
               chr5:38420656-38420839 (view UCSC Genome Browser custom track)
               

               Alignm length:
               187
               

               Alignm identity:
               132
               

               Alignm E-value:
               6e-21
               

               Alignm gaps (pig, cow):
               19, 76
               

               Conread position:
               597-743
               

               Cow position:
               chr5:51018786-51018937 (view UCSC Genome Browser custom track)
               

               Alignm length:
               152
               

               Alignm identity:
               114
               

               Alignm E-value:
               2e-22
               

               Alignm gaps (pig, cow):
               64, 0
               

               Conread position:
               597-752
               

               Cow position:
               chr5:18091113-18091264 (view UCSC Genome Browser custom track)
               

               Alignm length:
               160
               

               Alignm identity:
               122
               

               Alignm E-value:
               2e-22
               

               Alignm gaps (pig, cow):
               147, 40
               

               Conread position:
               597-765
               

               Cow position:
               chr5:38382690-38382523 (view UCSC Genome Browser custom track)
               

               Alignm length:
               171
               

               Alignm identity:
               125
               

               Alignm E-value:
               2e-23
               

               Alignm gaps (pig, cow):
               34, 20
               

               Conread position:
               620-758
               

               Cow position:
               chr5:13392744-13392879 (view UCSC Genome Browser custom track)
               

               Alignm length:
               140
               

               Alignm identity:
               106
               

               Alignm E-value:
               6e-21
               

               Alignm gaps (pig, cow):
               11, 39
               

               Conread position:
               621-752
               

               Cow position:
               chr5:59872927-59872797 (view UCSC Genome Browser custom track)
               

               Alignm length:
               132
               

               Alignm identity:
               103
               

               Alignm E-value:
               9e-25
               

               Alignm gaps (pig, cow):
               37, 0
               

               Conread position:
               630-773
               

               Cow position:
               chr5:54067883-54067739 (view UCSC Genome Browser custom track)
               

               Alignm length:
               146
               

               Alignm identity:
               108
               

               Alignm E-value:
               6e-21
               

               Alignm gaps (pig, cow):
               106, 32
               

               Conread position:
               635-775
               

               Cow position:
               chr5:52268179-52268033 (view UCSC Genome Browser custom track)
               

               Alignm length:
               147
               

               Alignm identity:
               111
               

               Alignm E-value:
               2e-21
               

               Alignm gaps (pig, cow):
               23, 0
               

               Conread position:
               655-770
               

               Cow position:
               chr5:45854643-45854761 (view UCSC Genome Browser custom track)
               

               Alignm length:
               119
               

               Alignm identity:
               95
               

               Alignm E-value:
               2e-21
               

               Alignm gaps (pig, cow):
               99, 0
               

               Conread position:
               656-747
               

               Cow position:
               chr5:21374973-21374883 (view UCSC Genome Browser custom track)
               

               Alignm length:
               92
               

               Alignm identity:
               79
               

               Alignm E-value:
               6e-21
               

               Alignm gaps (pig, cow):
               81, 0
               

               Conread position:
               657-760
               

               Cow position:
               chr5:56578845-56578948 (view UCSC Genome Browser custom track)
               

               Alignm length:
               104
               

               Alignm identity:
               84
               

               Alignm E-value:
               6e-21
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               657-761
               

               Cow position:
               chr5:41757757-41757861 (view UCSC Genome Browser custom track)
               

               Alignm length:
               105
               

               Alignm identity:
               85
               

               Alignm E-value:
               2e-21
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               657-761
               

               Cow position:
               chr5:51012144-51012248 (view UCSC Genome Browser custom track)
               

               Alignm length:
               105
               

               Alignm identity:
               86
               

               Alignm E-value:
               2e-22
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               657-763
               

               Cow position:
               chr5:56624370-56624264 (view UCSC Genome Browser custom track)
               

               Alignm length:
               107
               

               Alignm identity:
               87
               

               Alignm E-value:
               2e-22
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               657-765
               

               Cow position:
               chr5:40637444-40637552 (view UCSC Genome Browser custom track)
               

               Alignm length:
               109
               

               Alignm identity:
               87
               

               Alignm E-value:
               2e-21
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               657-765
               

               Cow position:
               chr5:54374960-54375068 (view UCSC Genome Browser custom track)
               

               Alignm length:
               109
               

               Alignm identity:
               89
               

               Alignm E-value:
               2e-23
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               661-768
               

               Cow position:
               chr5:43434854-43434746 (view UCSC Genome Browser custom track)
               

               Alignm length:
               109
               

               Alignm identity:
               89
               

               Alignm E-value:
               2e-22
               

               Alignm gaps (pig, cow):
               92, 0
               
Show alignments to all cow chromosomes.
Conread position:	1-479
Cow position:	chr5:7385648-7386118 (view UCSC Genome Browser custom track)
Alignm length:	487
Alignm identity:	329
Alignm E-value:	0
Alignm gaps (pig, cow):	71, 186
Conread position:	1-511
Cow position:	chr5:33467542-33467039 (view UCSC Genome Browser custom track)
Alignm length:	516
Alignm identity:	324
Alignm E-value:	1e-38
Alignm gaps (pig, cow):	181, 154
Conread position:	1-535
Cow position:	chr5:34115147-34115680 (view UCSC Genome Browser custom track)
Alignm length:	556
Alignm identity:	415
Alignm E-value:	0
Alignm gaps (pig, cow):	136, 186
Conread position:	1-541
Cow position:	chr5:58460900-58460364 (view UCSC Genome Browser custom track)
Alignm length:	552
Alignm identity:	398
Alignm E-value:	0
Alignm gaps (pig, cow):	141, 133
Conread position:	1-551
Cow position:	chr5:16184597-16185131 (view UCSC Genome Browser custom track)
Alignm length:	553
Alignm identity:	431
Alignm E-value:	0
Alignm gaps (pig, cow):	455, 187
Conread position:	1-552
Cow position:	chr5:21943882-21944442 (view UCSC Genome Browser custom track)
Alignm length:	571
Alignm identity:	413
Alignm E-value:	0
Alignm gaps (pig, cow):	148, 191
Conread position:	1-555
Cow position:	chr5:41523280-41522755 (view UCSC Genome Browser custom track)
Alignm length:	555
Alignm identity:	412
Alignm E-value:	0
Alignm gaps (pig, cow):	55, 0
Conread position:	1-562
Cow position:	chr5:10261738-10261179 (view UCSC Genome Browser custom track)
Alignm length:	575
Alignm identity:	409
Alignm E-value:	0
Alignm gaps (pig, cow):	129, 192
Conread position:	1-566
Cow position:	chr5:62827249-62826692 (view UCSC Genome Browser custom track)
Alignm length:	570
Alignm identity:	421
Alignm E-value:	0
Alignm gaps (pig, cow):	455, 167
Conread position:	1-570
Cow position:	chr5:4032506-4031927 (view UCSC Genome Browser custom track)
Alignm length:	592
Alignm identity:	418
Alignm E-value:	0
Alignm gaps (pig, cow):	136, 119
Conread position:	1-578
Cow position:	chr5:56442787-56443345 (view UCSC Genome Browser custom track)
Alignm length:	591
Alignm identity:	422
Alignm E-value:	0
Alignm gaps (pig, cow):	169, 129
Conread position:	1-587
Cow position:	chr5:3281363-3280796 (view UCSC Genome Browser custom track)
Alignm length:	591
Alignm identity:	425
Alignm E-value:	0
Alignm gaps (pig, cow):	37, 168
Conread position:	1-596
Cow position:	chr5:16206637-16206067 (view UCSC Genome Browser custom track)
Alignm length:	598
Alignm identity:	442
Alignm E-value:	0
Alignm gaps (pig, cow):	455, 191
Conread position:	1-598
Cow position:	chr5:360436-359849 (view UCSC Genome Browser custom track)
Alignm length:	608
Alignm identity:	448
Alignm E-value:	0
Alignm gaps (pig, cow):	130, 58
Conread position:	1-599
Cow position:	chr5:26094653-26094075 (view UCSC Genome Browser custom track)
Alignm length:	610
Alignm identity:	448
Alignm E-value:	0
Alignm gaps (pig, cow):	223, 48
Conread position:	1-600
Cow position:	chr5:32697280-32696730 (view UCSC Genome Browser custom track)
Alignm length:	600
Alignm identity:	436
Alignm E-value:	0
Alignm gaps (pig, cow):	101, 0
Conread position:	1-654
Cow position:	chr5:47889195-47888568 (view UCSC Genome Browser custom track)
Alignm length:	661
Alignm identity:	462
Alignm E-value:	0
Alignm gaps (pig, cow):	374, 48
Conread position:	1-673
Cow position:	chr5:58855613-58856270 (view UCSC Genome Browser custom track)
Alignm length:	682
Alignm identity:	498
Alignm E-value:	0
Alignm gaps (pig, cow):	162, 11
Conread position:	1-689
Cow position:	chr5:34528083-34528721 (view UCSC Genome Browser custom track)
Alignm length:	690
Alignm identity:	496
Alignm E-value:	0
Alignm gaps (pig, cow):	394, 74
Conread position:	1-722
Cow position:	chr5:26378162-26377471 (view UCSC Genome Browser custom track)
Alignm length:	727
Alignm identity:	501
Alignm E-value:	0
Alignm gaps (pig, cow):	77, 8