Cow genome map
| Conread name: | Utr1-UTR01D100086 |
| Conread position: | 3-494 |
| Cow position: | chr10:38542679-38542196 (view UCSC Genome Browser custom track) |
| Alignm length: | 498 |
| Alignm identity: | 383 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 187, 100 |
| Conread position: | 3-520 |
| Cow position: | chr10:22529176-22528673 (view UCSC Genome Browser custom track) |
| Alignm length: | 528 |
| Alignm identity: | 367 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 187, 25 |
| Conread position: | 3-521 |
| Cow position: | chr10:63954548-63955050 (view UCSC Genome Browser custom track) |
| Alignm length: | 525 |
| Alignm identity: | 399 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 182, 13 |
| Conread position: | 3-536 |
| Cow position: | chr10:6253785-6253235 (view UCSC Genome Browser custom track) |
| Alignm length: | 563 |
| Alignm identity: | 393 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 183, 54 |
| Conread position: | 3-536 |
| Cow position: | chr10:20373382-20372855 (view UCSC Genome Browser custom track) |
| Alignm length: | 548 |
| Alignm identity: | 418 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 87, 59 |
| Conread position: | 3-536 |
| Cow position: | chr10:21080880-21081409 (view UCSC Genome Browser custom track) |
| Alignm length: | 547 |
| Alignm identity: | 390 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 172, 59 |
| Conread position: | 3-536 |
| Cow position: | chr10:50017319-50016818 (view UCSC Genome Browser custom track) |
| Alignm length: | 539 |
| Alignm identity: | 396 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 88, 84 |
| Conread position: | 3-540 |
| Cow position: | chr10:28030891-28030358 (view UCSC Genome Browser custom track) |
| Alignm length: | 548 |
| Alignm identity: | 411 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 183, 104 |
| Conread position: | 4-517 |
| Cow position: | chr10:14908303-14908806 (view UCSC Genome Browser custom track) |
| Alignm length: | 526 |
| Alignm identity: | 380 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 242, 74 |
| Conread position: | 4-540 |
| Cow position: | chr10:1720820-1720293 (view UCSC Genome Browser custom track) |
| Alignm length: | 545 |
| Alignm identity: | 413 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 87, 24 |
| Conread position: | 6-521 |
| Cow position: | chr10:40736733-40737231 (view UCSC Genome Browser custom track) |
| Alignm length: | 522 |
| Alignm identity: | 395 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 238, 101 |
| Conread position: | 6-521 |
| Cow position: | chr10:48170567-48171085 (view UCSC Genome Browser custom track) |
| Alignm length: | 533 |
| Alignm identity: | 397 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 92, 102 |
| Conread position: | 7-521 |
| Cow position: | chr10:34666862-34666357 (view UCSC Genome Browser custom track) |
| Alignm length: | 523 |
| Alignm identity: | 368 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 179, 97 |
| Conread position: | 10-536 |
| Cow position: | chr10:64287326-64286811 (view UCSC Genome Browser custom track) |
| Alignm length: | 534 |
| Alignm identity: | 375 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 71, 87 |
| Conread position: | 13-520 |
| Cow position: | chr10:47772476-47772969 (view UCSC Genome Browser custom track) |
| Alignm length: | 516 |
| Alignm identity: | 367 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 162, 90 |
| Conread position: | 13-535 |
| Cow position: | chr10:51864269-51863785 (view UCSC Genome Browser custom track) |
| Alignm length: | 526 |
| Alignm identity: | 352 |
| Alignm E-value: | 1.4013e-45 |
| Alignm gaps (pig, cow): | 244, 79 |
| Conread position: | 42-521 |
| Cow position: | chr10:48385143-48384678 (view UCSC Genome Browser custom track) |
| Alignm length: | 487 |
| Alignm identity: | 356 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 148, 65 |
| Conread position: | 42-536 |
| Cow position: | chr10:2516123-2516607 (view UCSC Genome Browser custom track) |
| Alignm length: | 505 |
| Alignm identity: | 376 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 139, 13 |
| Conread position: | 46-521 |
| Cow position: | chr10:19523058-19522598 (view UCSC Genome Browser custom track) |
| Alignm length: | 483 |
| Alignm identity: | 360 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 140, 7 |
| Conread position: | 57-521 |
| Cow position: | chr10:25341209-25341658 (view UCSC Genome Browser custom track) |
| Alignm length: | 468 |
| Alignm identity: | 357 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 137, 50 |
| Conread position: | 90-536 |
| Cow position: | chr10:14730820-14730395 (view UCSC Genome Browser custom track) |
| Alignm length: | 451 |
| Alignm identity: | 303 |
| Alignm E-value: | 4.99983e-42 |
| Alignm gaps (pig, cow): | 162, 17 |
| Conread position: | 119-534 |
| Cow position: | chr10:69935940-69935547 (view UCSC Genome Browser custom track) |
| Alignm length: | 418 |
| Alignm identity: | 305 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 130, 49 |
| Conread position: | 123-521 |
| Cow position: | chr10:22978990-22978604 (view UCSC Genome Browser custom track) |
| Alignm length: | 405 |
| Alignm identity: | 305 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 128, 7 |
| Conread position: | 137-521 |
| Cow position: | chr10:28775006-28775389 (view UCSC Genome Browser custom track) |
| Alignm length: | 400 |
| Alignm identity: | 275 |
| Alignm E-value: | 1.99993e-41 |
| Alignm gaps (pig, cow): | 70, 57 |
| Conread position: | 184-473 |
| Cow position: | chr10:40269092-40269368 (view UCSC Genome Browser custom track) |
| Alignm length: | 292 |
| Alignm identity: | 221 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 67, 59 |
| Conread position: | 197-537 |
| Cow position: | chr10:50110969-50110635 (view UCSC Genome Browser custom track) |
| Alignm length: | 347 |
| Alignm identity: | 256 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 60, 94 |
| Conread position: | 207-536 |
| Cow position: | chr10:39775334-39775026 (view UCSC Genome Browser custom track) |
| Alignm length: | 332 |
| Alignm identity: | 242 |
| Alignm E-value: | 1.4013e-45 |
| Alignm gaps (pig, cow): | 44, 56 |
| Conread position: | 218-494 |
| Cow position: | chr10:60354397-60354662 (view UCSC Genome Browser custom track) |
| Alignm length: | 279 |
| Alignm identity: | 203 |
| Alignm E-value: | 4.99997e-41 |
| Alignm gaps (pig, cow): | 33, 181 |
| Conread position: | 221-521 |
| Cow position: | chr10:24728-25020 (view UCSC Genome Browser custom track) |
| Alignm length: | 306 |
| Alignm identity: | 233 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 30, 178 |
| Conread position: | 250-524 |
| Cow position: | chr10:9799225-9798961 (view UCSC Genome Browser custom track) |
| Alignm length: | 278 |
| Alignm identity: | 204 |
| Alignm E-value: | 1.99993e-41 |
| Alignm gaps (pig, cow): | 68, 104 |
| Conread position: | 263-540 |
| Cow position: | chr10:43289073-43288803 (view UCSC Genome Browser custom track) |
| Alignm length: | 286 |
| Alignm identity: | 211 |
| Alignm E-value: | 4.99997e-41 |
| Alignm gaps (pig, cow): | 55, 81 |
| Conread position: | 286-493 |
| Cow position: | chr10:67105960-67105770 (view UCSC Genome Browser custom track) |
| Alignm length: | 209 |
| Alignm identity: | 157 |
| Alignm E-value: | 4e-29 |
| Alignm gaps (pig, cow): | 30, 75 |
| Conread position: | 315-536 |
| Cow position: | chr10:48097660-48097874 (view UCSC Genome Browser custom track) |
| Alignm length: | 227 |
| Alignm identity: | 163 |
| Alignm E-value: | 3e-27 |
| Alignm gaps (pig, cow): | 181, 82 |
| Conread position: | 317-491 |
| Cow position: | chr10:41406021-41406183 (view UCSC Genome Browser custom track) |
| Alignm length: | 175 |
| Alignm identity: | 134 |
| Alignm E-value: | 4e-28 |
| Alignm gaps (pig, cow): | 82, 0 |
| Conread position: | 318-536 |
| Cow position: | chr10:31533803-31534010 (view UCSC Genome Browser custom track) |
| Alignm length: | 221 |
| Alignm identity: | 164 |
| Alignm E-value: | 5e-31 |
| Alignm gaps (pig, cow): | 184, 67 |
| Conread position: | 320-504 |
| Cow position: | chr10:24785145-24785317 (view UCSC Genome Browser custom track) |
| Alignm length: | 186 |
| Alignm identity: | 137 |
| Alignm E-value: | 2e-23 |
| Alignm gaps (pig, cow): | 182, 5 |
| Conread position: | 333-535 |
| Cow position: | chr10:22471376-22471576 (view UCSC Genome Browser custom track) |
| Alignm length: | 204 |
| Alignm identity: | 150 |
| Alignm E-value: | 2e-32 |
| Alignm gaps (pig, cow): | 157, 53 |
| Conread position: | 344-520 |
| Cow position: | chr10:35246695-35246529 (view UCSC Genome Browser custom track) |
| Alignm length: | 177 |
| Alignm identity: | 127 |
| Alignm E-value: | 6e-22 |
| Alignm gaps (pig, cow): | 55, 0 |
| Conread position: | 406-540 |
| Cow position: | chr10:60936085-60936219 (view UCSC Genome Browser custom track) |
| Alignm length: | 137 |
| Alignm identity: | 105 |
| Alignm E-value: | 2e-21 |
| Alignm gaps (pig, cow): | 96, 37 |
Show alignments to all cow chromosomes.