Cow genome map
| Conread name: | Utr1-UTR01D100086 |
| Conread position: | 3-521 |
| Cow position: | chr11:26068438-26067920 (view UCSC Genome Browser custom track) |
| Alignm length: | 532 |
| Alignm identity: | 403 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 134, 109 |
| Conread position: | 3-536 |
| Cow position: | chr11:39151279-39151812 (view UCSC Genome Browser custom track) |
| Alignm length: | 545 |
| Alignm identity: | 406 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 205, 110 |
| Conread position: | 3-536 |
| Cow position: | chr11:49936059-49935536 (view UCSC Genome Browser custom track) |
| Alignm length: | 544 |
| Alignm identity: | 397 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 254, 104 |
| Conread position: | 3-542 |
| Cow position: | chr11:74928480-74929006 (view UCSC Genome Browser custom track) |
| Alignm length: | 547 |
| Alignm identity: | 411 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 54, 108 |
| Conread position: | 4-520 |
| Cow position: | chr11:46412331-46412830 (view UCSC Genome Browser custom track) |
| Alignm length: | 530 |
| Alignm identity: | 377 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 48, 105 |
| Conread position: | 4-521 |
| Cow position: | chr11:40457858-40458368 (view UCSC Genome Browser custom track) |
| Alignm length: | 526 |
| Alignm identity: | 401 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 186, 74 |
| Conread position: | 5-468 |
| Cow position: | chr11:26400164-26400618 (view UCSC Genome Browser custom track) |
| Alignm length: | 473 |
| Alignm identity: | 360 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 143, 40 |
| Conread position: | 5-540 |
| Cow position: | chr11:56463045-56463578 (view UCSC Genome Browser custom track) |
| Alignm length: | 547 |
| Alignm identity: | 409 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 181, 102 |
| Conread position: | 6-490 |
| Cow position: | chr11:33688334-33687890 (view UCSC Genome Browser custom track) |
| Alignm length: | 486 |
| Alignm identity: | 350 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 245, 39 |
| Conread position: | 7-532 |
| Cow position: | chr11:84773852-84774371 (view UCSC Genome Browser custom track) |
| Alignm length: | 535 |
| Alignm identity: | 377 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 179, 21 |
| Conread position: | 9-521 |
| Cow position: | chr11:10093569-10094061 (view UCSC Genome Browser custom track) |
| Alignm length: | 523 |
| Alignm identity: | 392 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 138, 47 |
| Conread position: | 10-536 |
| Cow position: | chr11:25335828-25336350 (view UCSC Genome Browser custom track) |
| Alignm length: | 537 |
| Alignm identity: | 403 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 188, 97 |
| Conread position: | 12-521 |
| Cow position: | chr11:27659939-27660430 (view UCSC Genome Browser custom track) |
| Alignm length: | 515 |
| Alignm identity: | 377 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 174, 91 |
| Conread position: | 13-494 |
| Cow position: | chr11:4205872-4206335 (view UCSC Genome Browser custom track) |
| Alignm length: | 488 |
| Alignm identity: | 343 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 156, 20 |
| Conread position: | 19-540 |
| Cow position: | chr11:19507028-19507535 (view UCSC Genome Browser custom track) |
| Alignm length: | 527 |
| Alignm identity: | 367 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 171, 62 |
| Conread position: | 33-530 |
| Cow position: | chr11:40773342-40772869 (view UCSC Genome Browser custom track) |
| Alignm length: | 509 |
| Alignm identity: | 373 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 152, 74 |
| Conread position: | 90-495 |
| Cow position: | chr11:77746439-77746042 (view UCSC Genome Browser custom track) |
| Alignm length: | 414 |
| Alignm identity: | 314 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 63, 17 |
| Conread position: | 136-494 |
| Cow position: | chr11:17832381-17832045 (view UCSC Genome Browser custom track) |
| Alignm length: | 364 |
| Alignm identity: | 249 |
| Alignm E-value: | 8e-33 |
| Alignm gaps (pig, cow): | 5, 108 |
| Conread position: | 139-533 |
| Cow position: | chr11:21853433-21853048 (view UCSC Genome Browser custom track) |
| Alignm length: | 399 |
| Alignm identity: | 265 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 112, 260 |
| Conread position: | 168-536 |
| Cow position: | chr11:31836035-31836396 (view UCSC Genome Browser custom track) |
| Alignm length: | 380 |
| Alignm identity: | 276 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 22, 67 |
| Conread position: | 190-518 |
| Cow position: | chr11:8242237-8241918 (view UCSC Genome Browser custom track) |
| Alignm length: | 336 |
| Alignm identity: | 220 |
| Alignm E-value: | 3e-23 |
| Alignm gaps (pig, cow): | 37, 122 |
| Conread position: | 205-540 |
| Cow position: | chr11:56227813-56228144 (view UCSC Genome Browser custom track) |
| Alignm length: | 345 |
| Alignm identity: | 240 |
| Alignm E-value: | 5e-40 |
| Alignm gaps (pig, cow): | 52, 158 |
| Conread position: | 215-521 |
| Cow position: | chr11:3230218-3230513 (view UCSC Genome Browser custom track) |
| Alignm length: | 311 |
| Alignm identity: | 224 |
| Alignm E-value: | 7.00649e-43 |
| Alignm gaps (pig, cow): | 42, 94 |
| Conread position: | 217-517 |
| Cow position: | chr11:38235873-38235584 (view UCSC Genome Browser custom track) |
| Alignm length: | 304 |
| Alignm identity: | 222 |
| Alignm E-value: | 2.8026e-45 |
| Alignm gaps (pig, cow): | 34, 133 |
| Conread position: | 223-540 |
| Cow position: | chr11:44870428-44870735 (view UCSC Genome Browser custom track) |
| Alignm length: | 328 |
| Alignm identity: | 232 |
| Alignm E-value: | 9e-34 |
| Alignm gaps (pig, cow): | 28, 60 |
| Conread position: | 250-520 |
| Cow position: | chr11:70602347-70602091 (view UCSC Genome Browser custom track) |
| Alignm length: | 274 |
| Alignm identity: | 198 |
| Alignm E-value: | 3e-35 |
| Alignm gaps (pig, cow): | 252, 24 |
| Conread position: | 287-540 |
| Cow position: | chr11:48658698-48658947 (view UCSC Genome Browser custom track) |
| Alignm length: | 263 |
| Alignm identity: | 189 |
| Alignm E-value: | 6e-31 |
| Alignm gaps (pig, cow): | 28, 12 |
| Conread position: | 299-490 |
| Cow position: | chr11:33687494-33687313 (view UCSC Genome Browser custom track) |
| Alignm length: | 194 |
| Alignm identity: | 142 |
| Alignm E-value: | 3e-24 |
| Alignm gaps (pig, cow): | 19, 100 |
| Conread position: | 309-536 |
| Cow position: | chr11:14650247-14650024 (view UCSC Genome Browser custom track) |
| Alignm length: | 236 |
| Alignm identity: | 175 |
| Alignm E-value: | 2e-31 |
| Alignm gaps (pig, cow): | 7, 89 |
Show alignments to all cow chromosomes.