Cow genome map
| Conread name: | Utr1-UTR01D100086 |
| Conread position: | 3-456 |
| Cow position: | chr13:20538789-20538345 (view UCSC Genome Browser custom track) |
| Alignm length: | 461 |
| Alignm identity: | 363 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 84, 112 |
| Conread position: | 3-473 |
| Cow position: | chr13:3001594-3001134 (view UCSC Genome Browser custom track) |
| Alignm length: | 482 |
| Alignm identity: | 340 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 87, 227 |
| Conread position: | 3-492 |
| Cow position: | chr13:47574802-47574336 (view UCSC Genome Browser custom track) |
| Alignm length: | 492 |
| Alignm identity: | 376 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 241, 104 |
| Conread position: | 3-520 |
| Cow position: | chr13:4944146-4944658 (view UCSC Genome Browser custom track) |
| Alignm length: | 525 |
| Alignm identity: | 401 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 183, 104 |
| Conread position: | 3-530 |
| Cow position: | chr13:54238688-54238173 (view UCSC Genome Browser custom track) |
| Alignm length: | 542 |
| Alignm identity: | 416 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 156, 21 |
| Conread position: | 3-534 |
| Cow position: | chr13:34940423-34940953 (view UCSC Genome Browser custom track) |
| Alignm length: | 553 |
| Alignm identity: | 406 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 155, 59 |
| Conread position: | 3-535 |
| Cow position: | chr13:44324207-44323683 (view UCSC Genome Browser custom track) |
| Alignm length: | 541 |
| Alignm identity: | 399 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 53, 106 |
| Conread position: | 3-536 |
| Cow position: | chr13:21906150-21905625 (view UCSC Genome Browser custom track) |
| Alignm length: | 551 |
| Alignm identity: | 394 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 185, 52 |
| Conread position: | 3-537 |
| Cow position: | chr13:23267074-23266545 (view UCSC Genome Browser custom track) |
| Alignm length: | 547 |
| Alignm identity: | 407 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 39, 105 |
| Conread position: | 3-537 |
| Cow position: | chr13:26823347-26822848 (view UCSC Genome Browser custom track) |
| Alignm length: | 544 |
| Alignm identity: | 398 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 183, 44 |
| Conread position: | 3-539 |
| Cow position: | chr13:16249188-16248655 (view UCSC Genome Browser custom track) |
| Alignm length: | 547 |
| Alignm identity: | 425 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 104, 36 |
| Conread position: | 4-535 |
| Cow position: | chr13:34905817-34905304 (view UCSC Genome Browser custom track) |
| Alignm length: | 539 |
| Alignm identity: | 420 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 169, 103 |
| Conread position: | 5-530 |
| Cow position: | chr13:22907510-22906990 (view UCSC Genome Browser custom track) |
| Alignm length: | 537 |
| Alignm identity: | 392 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 182, 102 |
| Conread position: | 5-536 |
| Cow position: | chr13:32774587-32774069 (view UCSC Genome Browser custom track) |
| Alignm length: | 538 |
| Alignm identity: | 405 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 247, 102 |
| Conread position: | 6-521 |
| Cow position: | chr13:3314387-3314888 (view UCSC Genome Browser custom track) |
| Alignm length: | 520 |
| Alignm identity: | 394 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 174, 101 |
| Conread position: | 32-492 |
| Cow position: | chr13:30652495-30652049 (view UCSC Genome Browser custom track) |
| Alignm length: | 465 |
| Alignm identity: | 343 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 154, 75 |
| Conread position: | 39-472 |
| Cow position: | chr13:18097830-18097405 (view UCSC Genome Browser custom track) |
| Alignm length: | 439 |
| Alignm identity: | 329 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 149, 68 |
| Conread position: | 44-520 |
| Cow position: | chr13:17485388-17485854 (view UCSC Genome Browser custom track) |
| Alignm length: | 484 |
| Alignm identity: | 324 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 142, 63 |
| Conread position: | 76-521 |
| Cow position: | chr13:32922481-32922045 (view UCSC Genome Browser custom track) |
| Alignm length: | 453 |
| Alignm identity: | 341 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 110, 31 |
| Conread position: | 172-521 |
| Cow position: | chr13:52860311-52859980 (view UCSC Genome Browser custom track) |
| Alignm length: | 354 |
| Alignm identity: | 268 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 13, 176 |
| Conread position: | 179-536 |
| Cow position: | chr13:5717755-5717408 (view UCSC Genome Browser custom track) |
| Alignm length: | 364 |
| Alignm identity: | 239 |
| Alignm E-value: | 1e-29 |
| Alignm gaps (pig, cow): | 73, 20 |
| Conread position: | 183-536 |
| Cow position: | chr13:21134671-21135009 (view UCSC Genome Browser custom track) |
| Alignm length: | 356 |
| Alignm identity: | 240 |
| Alignm E-value: | 3e-36 |
| Alignm gaps (pig, cow): | 74, 29 |
| Conread position: | 184-536 |
| Cow position: | chr13:49806004-49805670 (view UCSC Genome Browser custom track) |
| Alignm length: | 355 |
| Alignm identity: | 259 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 67, 205 |
| Conread position: | 217-530 |
| Cow position: | chr13:32152812-32152510 (view UCSC Genome Browser custom track) |
| Alignm length: | 319 |
| Alignm identity: | 224 |
| Alignm E-value: | 3e-38 |
| Alignm gaps (pig, cow): | 34, 58 |
| Conread position: | 238-536 |
| Cow position: | chr13:15447013-15446732 (view UCSC Genome Browser custom track) |
| Alignm length: | 302 |
| Alignm identity: | 228 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 13, 37 |
| Conread position: | 287-529 |
| Cow position: | chr13:43593878-43594104 (view UCSC Genome Browser custom track) |
| Alignm length: | 246 |
| Alignm identity: | 178 |
| Alignm E-value: | 1e-27 |
| Alignm gaps (pig, cow): | 31, 8 |
| Conread position: | 315-441 |
| Cow position: | chr13:34262102-34261986 (view UCSC Genome Browser custom track) |
| Alignm length: | 127 |
| Alignm identity: | 103 |
| Alignm E-value: | 5e-22 |
| Alignm gaps (pig, cow): | 7, 0 |
| Conread position: | 317-535 |
| Cow position: | chr13:47313625-47313409 (view UCSC Genome Browser custom track) |
| Alignm length: | 229 |
| Alignm identity: | 166 |
| Alignm E-value: | 8e-26 |
| Alignm gaps (pig, cow): | 179, 80 |
| Conread position: | 325-536 |
| Cow position: | chr13:24059408-24059614 (view UCSC Genome Browser custom track) |
| Alignm length: | 219 |
| Alignm identity: | 164 |
| Alignm E-value: | 1e-30 |
| Alignm gaps (pig, cow): | 171, 72 |
| Conread position: | 339-461 |
| Cow position: | chr13:26847444-26847563 (view UCSC Genome Browser custom track) |
| Alignm length: | 123 |
| Alignm identity: | 98 |
| Alignm E-value: | 6e-23 |
| Alignm gaps (pig, cow): | 60, 0 |
Show alignments to all cow chromosomes.