Cow genome map
| Conread name: | Utr1-UTR01D100086 |
| Conread position: | 3-494 |
| Cow position: | chr21:47428487-47428969 (view UCSC Genome Browser custom track) |
| Alignm length: | 496 |
| Alignm identity: | 371 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 182, 109 |
| Conread position: | 3-511 |
| Cow position: | chr21:27125573-27125075 (view UCSC Genome Browser custom track) |
| Alignm length: | 513 |
| Alignm identity: | 380 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 187, 104 |
| Conread position: | 3-521 |
| Cow position: | chr21:44848-45355 (view UCSC Genome Browser custom track) |
| Alignm length: | 529 |
| Alignm identity: | 385 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 183, 104 |
| Conread position: | 3-521 |
| Cow position: | chr21:6622969-6623466 (view UCSC Genome Browser custom track) |
| Alignm length: | 522 |
| Alignm identity: | 394 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 37, 76 |
| Conread position: | 3-521 |
| Cow position: | chr21:18284955-18285461 (view UCSC Genome Browser custom track) |
| Alignm length: | 528 |
| Alignm identity: | 405 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 153, 62 |
| Conread position: | 3-534 |
| Cow position: | chr21:33728257-33728780 (view UCSC Genome Browser custom track) |
| Alignm length: | 543 |
| Alignm identity: | 396 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 182, 27 |
| Conread position: | 3-540 |
| Cow position: | chr21:25189792-25190332 (view UCSC Genome Browser custom track) |
| Alignm length: | 553 |
| Alignm identity: | 402 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 163, 104 |
| Conread position: | 4-517 |
| Cow position: | chr21:2419346-2419843 (view UCSC Genome Browser custom track) |
| Alignm length: | 516 |
| Alignm identity: | 395 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 250, 103 |
| Conread position: | 5-494 |
| Cow position: | chr21:9895509-9895983 (view UCSC Genome Browser custom track) |
| Alignm length: | 493 |
| Alignm identity: | 393 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 181, 84 |
| Conread position: | 7-540 |
| Cow position: | chr21:47361020-47360500 (view UCSC Genome Browser custom track) |
| Alignm length: | 541 |
| Alignm identity: | 383 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 187, 96 |
| Conread position: | 10-521 |
| Cow position: | chr21:4738791-4739289 (view UCSC Genome Browser custom track) |
| Alignm length: | 516 |
| Alignm identity: | 347 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 177, 116 |
| Conread position: | 32-492 |
| Cow position: | chr21:18847163-18846712 (view UCSC Genome Browser custom track) |
| Alignm length: | 465 |
| Alignm identity: | 317 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 64, 314 |
| Conread position: | 32-544 |
| Cow position: | chr21:18851538-18851039 (view UCSC Genome Browser custom track) |
| Alignm length: | 523 |
| Alignm identity: | 353 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 58, 77 |
| Conread position: | 37-524 |
| Cow position: | chr21:23802252-23801780 (view UCSC Genome Browser custom track) |
| Alignm length: | 495 |
| Alignm identity: | 350 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 124, 66 |
| Conread position: | 48-536 |
| Cow position: | chr21:32534028-32534487 (view UCSC Genome Browser custom track) |
| Alignm length: | 493 |
| Alignm identity: | 368 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 118, 64 |
| Conread position: | 54-537 |
| Cow position: | chr21:4188736-4189218 (view UCSC Genome Browser custom track) |
| Alignm length: | 496 |
| Alignm identity: | 371 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 90, 33 |
| Conread position: | 63-524 |
| Cow position: | chr21:42460848-42460406 (view UCSC Genome Browser custom track) |
| Alignm length: | 467 |
| Alignm identity: | 335 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 125, 42 |
| Conread position: | 89-494 |
| Cow position: | chr21:28597822-28598216 (view UCSC Genome Browser custom track) |
| Alignm length: | 409 |
| Alignm identity: | 302 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 97, 18 |
| Conread position: | 111-540 |
| Cow position: | chr21:13286426-13286843 (view UCSC Genome Browser custom track) |
| Alignm length: | 440 |
| Alignm identity: | 277 |
| Alignm E-value: | 4e-22 |
| Alignm gaps (pig, cow): | 141, 59 |
| Conread position: | 151-521 |
| Cow position: | chr21:33934612-33934258 (view UCSC Genome Browser custom track) |
| Alignm length: | 376 |
| Alignm identity: | 222 |
| Alignm E-value: | 3e-30 |
| Alignm gaps (pig, cow): | 96, 207 |
| Conread position: | 155-494 |
| Cow position: | chr21:22315827-22316150 (view UCSC Genome Browser custom track) |
| Alignm length: | 343 |
| Alignm identity: | 247 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 30, 105 |
| Conread position: | 155-522 |
| Cow position: | chr21:13749456-13749814 (view UCSC Genome Browser custom track) |
| Alignm length: | 374 |
| Alignm identity: | 254 |
| Alignm E-value: | 3e-38 |
| Alignm gaps (pig, cow): | 35, 95 |
| Conread position: | 200-536 |
| Cow position: | chr21:46974388-46974059 (view UCSC Genome Browser custom track) |
| Alignm length: | 346 |
| Alignm identity: | 268 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 51, 130 |
| Conread position: | 231-517 |
| Cow position: | chr21:44862218-44861948 (view UCSC Genome Browser custom track) |
| Alignm length: | 289 |
| Alignm identity: | 208 |
| Alignm E-value: | 2e-37 |
| Alignm gaps (pig, cow): | 20, 45 |
| Conread position: | 239-524 |
| Cow position: | chr21:18819255-18818977 (view UCSC Genome Browser custom track) |
| Alignm length: | 293 |
| Alignm identity: | 212 |
| Alignm E-value: | 8e-38 |
| Alignm gaps (pig, cow): | 12, 136 |
| Conread position: | 241-495 |
| Cow position: | chr21:28616649-28616882 (view UCSC Genome Browser custom track) |
| Alignm length: | 256 |
| Alignm identity: | 193 |
| Alignm E-value: | 2e-36 |
| Alignm gaps (pig, cow): | 62, 16 |
| Conread position: | 266-533 |
| Cow position: | chr21:13090372-13090125 (view UCSC Genome Browser custom track) |
| Alignm length: | 268 |
| Alignm identity: | 186 |
| Alignm E-value: | 2e-27 |
| Alignm gaps (pig, cow): | 42, 0 |
| Conread position: | 293-521 |
| Cow position: | chr21:21217037-21216822 (view UCSC Genome Browser custom track) |
| Alignm length: | 230 |
| Alignm identity: | 169 |
| Alignm E-value: | 4e-32 |
| Alignm gaps (pig, cow): | 25, 6 |
| Conread position: | 307-500 |
| Cow position: | chr21:17207628-17207810 (view UCSC Genome Browser custom track) |
| Alignm length: | 195 |
| Alignm identity: | 145 |
| Alignm E-value: | 8e-28 |
| Alignm gaps (pig, cow): | 12, 91 |
| Conread position: | 315-536 |
| Cow position: | chr21:28028085-28028307 (view UCSC Genome Browser custom track) |
| Alignm length: | 236 |
| Alignm identity: | 174 |
| Alignm E-value: | 2e-27 |
| Alignm gaps (pig, cow): | 10, 86 |
| Conread position: | 325-494 |
| Cow position: | chr21:20263207-20263050 (view UCSC Genome Browser custom track) |
| Alignm length: | 170 |
| Alignm identity: | 132 |
| Alignm E-value: | 3e-28 |
| Alignm gaps (pig, cow): | 72, 0 |
Show alignments to all cow chromosomes.