Cow genome map


           Conread name:
           Utr1-UTR01D100086
        

               Conread position:
               3-494
               

               Cow position:
               
               

               Alignm length:
               512
               

               Alignm identity:
               368
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               22, 107
               

               Conread position:
               3-494
               

               Cow position:
               
               

               Alignm length:
               497
               

               Alignm identity:
               372
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               185, 111
               

               Conread position:
               3-521
               

               Cow position:
               
               

               Alignm length:
               523
               

               Alignm identity:
               413
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               185, 104
               

               Conread position:
               3-530
               

               Cow position:
               
               

               Alignm length:
               532
               

               Alignm identity:
               402
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               257, 104
               

               Conread position:
               3-533
               

               Cow position:
               
               

               Alignm length:
               540
               

               Alignm identity:
               374
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               187, 76
               

               Conread position:
               3-536
               

               Cow position:
               
               

               Alignm length:
               545
               

               Alignm identity:
               411
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               68, 105
               

               Conread position:
               3-536
               

               Cow position:
               
               

               Alignm length:
               545
               

               Alignm identity:
               406
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               187, 61
               

               Conread position:
               3-536
               

               Cow position:
               
               

               Alignm length:
               539
               

               Alignm identity:
               374
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               183, 7
               

               Conread position:
               3-536
               

               Cow position:
               
               

               Alignm length:
               549
               

               Alignm identity:
               405
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               157, 104
               

               Conread position:
               3-536
               

               Cow position:
               
               

               Alignm length:
               548
               

               Alignm identity:
               375
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               146, 36
               

               Conread position:
               3-540
               

               Cow position:
               
               

               Alignm length:
               550
               

               Alignm identity:
               417
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               183, 104
               

               Conread position:
               3-540
               

               Cow position:
               
               

               Alignm length:
               548
               

               Alignm identity:
               384
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               187, 87
               

               Conread position:
               4-494
               

               Cow position:
               
               

               Alignm length:
               493
               

               Alignm identity:
               405
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               247, 103
               

               Conread position:
               5-536
               

               Cow position:
               
               

               Alignm length:
               558
               

               Alignm identity:
               384
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               137, 288
               

               Conread position:
               24-533
               

               Cow position:
               
               

               Alignm length:
               517
               

               Alignm identity:
               388
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               28, 39
               

               Conread position:
               52-488
               

               Cow position:
               
               

               Alignm length:
               446
               

               Alignm identity:
               334
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               136, 55
               

               Conread position:
               53-536
               

               Cow position:
               
               

               Alignm length:
               498
               

               Alignm identity:
               368
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               137, 54
               

               Conread position:
               57-521
               

               Cow position:
               
               

               Alignm length:
               470
               

               Alignm identity:
               352
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               133, 56
               

               Conread position:
               74-530
               

               Cow position:
               
               

               Alignm length:
               460
               

               Alignm identity:
               333
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               86, 33
               

               Conread position:
               89-536
               

               Cow position:
               
               

               Alignm length:
               462
               

               Alignm identity:
               317
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               21, 189
               

               Conread position:
               118-535
               

               Cow position:
               
               

               Alignm length:
               426
               

               Alignm identity:
               304
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               23, 185
               

               Conread position:
               137-535
               

               Cow position:
               
               

               Alignm length:
               413
               

               Alignm identity:
               300
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               49, 82
               

               Conread position:
               148-536
               

               Cow position:
               
               

               Alignm length:
               399
               

               Alignm identity:
               279
               

               Alignm E-value:
               2.94273e-44
               

               Alignm gaps (pig, cow):
               37, 76
               

               Conread position:
               161-536
               

               Cow position:
               
               

               Alignm length:
               382
               

               Alignm identity:
               291
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               25, 229
               

               Conread position:
               170-491
               

               Cow position:
               
               

               Alignm length:
               325
               

               Alignm identity:
               244
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               16, 89
               

               Conread position:
               174-536
               

               Cow position:
               
               

               Alignm length:
               369
               

               Alignm identity:
               274
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               12, 159
               

               Conread position:
               189-494
               

               Cow position:
               
               

               Alignm length:
               308
               

               Alignm identity:
               231
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               62, 189
               

               Conread position:
               189-520
               

               Cow position:
               
               

               Alignm length:
               336
               

               Alignm identity:
               230
               

               Alignm E-value:
               4e-37
               

               Alignm gaps (pig, cow):
               62, 16
               

               Conread position:
               215-521
               

               Cow position:
               
               

               Alignm length:
               312
               

               Alignm identity:
               215
               

               Alignm E-value:
               8e-33
               

               Alignm gaps (pig, cow):
               42, 82
               

               Conread position:
               229-536
               

               Cow position:
               
               

               Alignm length:
               314
               

               Alignm identity:
               235
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               23, 71
               

               Conread position:
               233-533
               

               Cow position:
               
               

               Alignm length:
               303
               

               Alignm identity:
               222
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               43, 50
               

               Conread position:
               233-536
               

               Cow position:
               
               

               Alignm length:
               311
               

               Alignm identity:
               240
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               85, 41
               

               Conread position:
               233-536
               

               Cow position:
               
               

               Alignm length:
               310
               

               Alignm identity:
               213
               

               Alignm E-value:
               3e-33
               

               Alignm gaps (pig, cow):
               24, 166
               

               Conread position:
               233-537
               

               Cow position:
               
               

               Alignm length:
               315
               

               Alignm identity:
               241
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               18, 41
               

               Conread position:
               234-521
               

               Cow position:
               
               

               Alignm length:
               293
               

               Alignm identity:
               219
               

               Alignm E-value:
               8.40779e-45
               

               Alignm gaps (pig, cow):
               17, 41
               

               Conread position:
               236-521
               

               Cow position:
               
               

               Alignm length:
               288
               

               Alignm identity:
               203
               

               Alignm E-value:
               7e-32
               

               Alignm gaps (pig, cow):
               15, 37
               

               Conread position:
               237-536
               

               Cow position:
               
               

               Alignm length:
               311
               

               Alignm identity:
               212
               

               Alignm E-value:
               2e-28
               

               Alignm gaps (pig, cow):
               20, 162
               

               Conread position:
               242-535
               

               Cow position:
               
               

               Alignm length:
               302
               

               Alignm identity:
               216
               

               Alignm E-value:
               7e-32
               

               Alignm gaps (pig, cow):
               64, 15
               

               Conread position:
               258-522
               

               Cow position:
               
               

               Alignm length:
               269
               

               Alignm identity:
               203
               

               Alignm E-value:
               2.94273e-44
               

               Alignm gaps (pig, cow):
               58, 113
               

               Conread position:
               259-536
               

               Cow position:
               
               

               Alignm length:
               285
               

               Alignm identity:
               203
               

               Alignm E-value:
               3e-34
               

               Alignm gaps (pig, cow):
               51, 15
               

               Conread position:
               265-521
               

               Cow position:
               
               

               Alignm length:
               261
               

               Alignm identity:
               206
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               53, 133
               

               Conread position:
               304-536
               

               Cow position:
               
               

               Alignm length:
               236
               

               Alignm identity:
               172
               

               Alignm E-value:
               2e-30
               

               Alignm gaps (pig, cow):
               14, 94
               

               Conread position:
               317-537
               

               Cow position:
               
               

               Alignm length:
               228
               

               Alignm identity:
               169
               

               Alignm E-value:
               3e-35
               

               Alignm gaps (pig, cow):
               184, 21
               

               Conread position:
               322-533
               

               Cow position:
               
               

               Alignm length:
               213
               

               Alignm identity:
               153
               

               Alignm E-value:
               1e-26
               

               Alignm gaps (pig, cow):
               11, 76
               

               Conread position:
               334-521
               

               Cow position:
               
               

               Alignm length:
               188
               

               Alignm identity:
               146
               

               Alignm E-value:
               8e-34
               

               Alignm gaps (pig, cow):
               12, 0
               

               Conread position:
               339-526
               

               Cow position:
               
               

               Alignm length:
               192
               

               Alignm identity:
               141
               

               Alignm E-value:
               7e-22
               

               Alignm gaps (pig, cow):
               161, 29
               

               Conread position:
               408-537
               

               Cow position:
               
               

               Alignm length:
               133
               

               Alignm identity:
               107
               

               Alignm E-value:
               1e-24
               

               Alignm gaps (pig, cow):
               94, 31
               
Show alignments to all cow chromosomes.