Cow genome map
| Conread name: | Utr1-UTR01D100086 |
| Conread position: | 3-492 |
| Cow position: | chr5:6031785-6032255 (view UCSC Genome Browser custom track) |
| Alignm length: | 499 |
| Alignm identity: | 379 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 183, 104 |
| Conread position: | 3-494 |
| Cow position: | chr5:56442078-56442540 (view UCSC Genome Browser custom track) |
| Alignm length: | 495 |
| Alignm identity: | 371 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 183, 58 |
| Conread position: | 3-494 |
| Cow position: | chr5:62435927-62436403 (view UCSC Genome Browser custom track) |
| Alignm length: | 496 |
| Alignm identity: | 386 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 191, 104 |
| Conread position: | 3-521 |
| Cow position: | chr5:46626472-46625963 (view UCSC Genome Browser custom track) |
| Alignm length: | 526 |
| Alignm identity: | 392 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 192, 101 |
| Conread position: | 3-536 |
| Cow position: | chr5:34191725-34192251 (view UCSC Genome Browser custom track) |
| Alignm length: | 546 |
| Alignm identity: | 421 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 182, 109 |
| Conread position: | 3-536 |
| Cow position: | chr5:39935890-39936430 (view UCSC Genome Browser custom track) |
| Alignm length: | 559 |
| Alignm identity: | 410 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 183, 23 |
| Conread position: | 3-536 |
| Cow position: | chr5:72856675-72857207 (view UCSC Genome Browser custom track) |
| Alignm length: | 545 |
| Alignm identity: | 404 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 183, 113 |
| Conread position: | 4-541 |
| Cow position: | chr5:63312715-63312190 (view UCSC Genome Browser custom track) |
| Alignm length: | 547 |
| Alignm identity: | 386 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 96, 89 |
| Conread position: | 6-494 |
| Cow position: | chr5:26135469-26134985 (view UCSC Genome Browser custom track) |
| Alignm length: | 500 |
| Alignm identity: | 375 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 90, 98 |
| Conread position: | 6-535 |
| Cow position: | chr5:27178456-27178966 (view UCSC Genome Browser custom track) |
| Alignm length: | 541 |
| Alignm identity: | 402 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 154, 88 |
| Conread position: | 7-494 |
| Cow position: | chr5:51684829-51684334 (view UCSC Genome Browser custom track) |
| Alignm length: | 512 |
| Alignm identity: | 384 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 119, 100 |
| Conread position: | 7-533 |
| Cow position: | chr5:53834459-53834980 (view UCSC Genome Browser custom track) |
| Alignm length: | 537 |
| Alignm identity: | 386 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 179, 100 |
| Conread position: | 7-537 |
| Cow position: | chr5:23754537-23754025 (view UCSC Genome Browser custom track) |
| Alignm length: | 543 |
| Alignm identity: | 357 |
| Alignm E-value: | 1.99965e-42 |
| Alignm gaps (pig, cow): | 95, 57 |
| Conread position: | 8-521 |
| Cow position: | chr5:46671417-46671916 (view UCSC Genome Browser custom track) |
| Alignm length: | 521 |
| Alignm identity: | 401 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 179, 99 |
| Conread position: | 13-441 |
| Cow position: | chr5:55683678-55684096 (view UCSC Genome Browser custom track) |
| Alignm length: | 435 |
| Alignm identity: | 276 |
| Alignm E-value: | 4e-29 |
| Alignm gaps (pig, cow): | 176, 115 |
| Conread position: | 16-500 |
| Cow position: | chr5:61330523-61330042 (view UCSC Genome Browser custom track) |
| Alignm length: | 493 |
| Alignm identity: | 324 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 167, 97 |
| Conread position: | 35-492 |
| Cow position: | chr5:47872273-47871827 (view UCSC Genome Browser custom track) |
| Alignm length: | 461 |
| Alignm identity: | 356 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 151, 77 |
| Conread position: | 59-533 |
| Cow position: | chr5:40347263-40346779 (view UCSC Genome Browser custom track) |
| Alignm length: | 489 |
| Alignm identity: | 321 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 81, 54 |
| Conread position: | 71-532 |
| Cow position: | chr5:25920904-25920467 (view UCSC Genome Browser custom track) |
| Alignm length: | 466 |
| Alignm identity: | 317 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 117, 36 |
| Conread position: | 81-535 |
| Cow position: | chr5:42676140-42676572 (view UCSC Genome Browser custom track) |
| Alignm length: | 463 |
| Alignm identity: | 353 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 105, 26 |
| Conread position: | 130-536 |
| Cow position: | chr5:23648498-23648103 (view UCSC Genome Browser custom track) |
| Alignm length: | 413 |
| Alignm identity: | 282 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 122, 64 |
| Conread position: | 132-520 |
| Cow position: | chr5:32811098-32810721 (view UCSC Genome Browser custom track) |
| Alignm length: | 394 |
| Alignm identity: | 285 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 67, 270 |
| Conread position: | 161-504 |
| Cow position: | chr5:58461739-58461399 (view UCSC Genome Browser custom track) |
| Alignm length: | 355 |
| Alignm identity: | 264 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 29, 97 |
| Conread position: | 167-539 |
| Cow position: | chr5:40929051-40928691 (view UCSC Genome Browser custom track) |
| Alignm length: | 382 |
| Alignm identity: | 265 |
| Alignm E-value: | 4.99997e-41 |
| Alignm gaps (pig, cow): | 85, 17 |
| Conread position: | 174-521 |
| Cow position: | chr5:41524029-41523685 (view UCSC Genome Browser custom track) |
| Alignm length: | 361 |
| Alignm identity: | 257 |
| Alignm E-value: | 2.8026e-45 |
| Alignm gaps (pig, cow): | 16, 226 |
| Conread position: | 200-536 |
| Cow position: | chr5:35207241-35207568 (view UCSC Genome Browser custom track) |
| Alignm length: | 340 |
| Alignm identity: | 257 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 51, 201 |
| Conread position: | 207-492 |
| Cow position: | chr5:6044007-6044279 (view UCSC Genome Browser custom track) |
| Alignm length: | 288 |
| Alignm identity: | 194 |
| Alignm E-value: | 3e-26 |
| Alignm gaps (pig, cow): | 36, 102 |
| Conread position: | 235-494 |
| Cow position: | chr5:8529685-8529928 (view UCSC Genome Browser custom track) |
| Alignm length: | 261 |
| Alignm identity: | 183 |
| Alignm E-value: | 1e-28 |
| Alignm gaps (pig, cow): | 22, 81 |
| Conread position: | 235-521 |
| Cow position: | chr5:6840168-6839880 (view UCSC Genome Browser custom track) |
| Alignm length: | 296 |
| Alignm identity: | 204 |
| Alignm E-value: | 2e-30 |
| Alignm gaps (pig, cow): | 16, 65 |
| Conread position: | 236-533 |
| Cow position: | chr5:1105837-1105549 (view UCSC Genome Browser custom track) |
| Alignm length: | 307 |
| Alignm identity: | 218 |
| Alignm E-value: | 8e-35 |
| Alignm gaps (pig, cow): | 15, 124 |
| Conread position: | 292-521 |
| Cow position: | chr5:6219036-6219255 (view UCSC Genome Browser custom track) |
| Alignm length: | 232 |
| Alignm identity: | 165 |
| Alignm E-value: | 4e-28 |
| Alignm gaps (pig, cow): | 26, 106 |
| Conread position: | 335-536 |
| Cow position: | chr5:54125200-54125402 (view UCSC Genome Browser custom track) |
| Alignm length: | 208 |
| Alignm identity: | 148 |
| Alignm E-value: | 9e-25 |
| Alignm gaps (pig, cow): | 160, 69 |
Show alignments to all cow chromosomes.