Cow genome map
| Conread name: | Utr1-UTR01D100086 |
| Conread position: | 3-491 |
| Cow position: | chrX:31728244-31728719 (view UCSC Genome Browser custom track) |
| Alignm length: | 495 |
| Alignm identity: | 375 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 11, 74 |
| Conread position: | 3-521 |
| Cow position: | chrX:10867079-10866581 (view UCSC Genome Browser custom track) |
| Alignm length: | 524 |
| Alignm identity: | 408 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 183, 104 |
| Conread position: | 3-521 |
| Cow position: | chrX:29287773-29288279 (view UCSC Genome Browser custom track) |
| Alignm length: | 526 |
| Alignm identity: | 407 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 34, 106 |
| Conread position: | 3-521 |
| Cow position: | chrX:40070822-40070325 (view UCSC Genome Browser custom track) |
| Alignm length: | 522 |
| Alignm identity: | 396 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 183, 30 |
| Conread position: | 3-522 |
| Cow position: | chrX:17891321-17891836 (view UCSC Genome Browser custom track) |
| Alignm length: | 529 |
| Alignm identity: | 395 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 150, 109 |
| Conread position: | 3-531 |
| Cow position: | chrX:22818851-22819379 (view UCSC Genome Browser custom track) |
| Alignm length: | 541 |
| Alignm identity: | 405 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 145, 401 |
| Conread position: | 4-494 |
| Cow position: | chrX:44193658-44193181 (view UCSC Genome Browser custom track) |
| Alignm length: | 495 |
| Alignm identity: | 380 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 185, 103 |
| Conread position: | 4-517 |
| Cow position: | chrX:3406548-3406059 (view UCSC Genome Browser custom track) |
| Alignm length: | 521 |
| Alignm identity: | 363 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 184, 103 |
| Conread position: | 4-537 |
| Cow position: | chrX:2382244-2382775 (view UCSC Genome Browser custom track) |
| Alignm length: | 544 |
| Alignm identity: | 395 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 184, 103 |
| Conread position: | 4-540 |
| Cow position: | chrX:20363357-20362836 (view UCSC Genome Browser custom track) |
| Alignm length: | 541 |
| Alignm identity: | 350 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 52, 93 |
| Conread position: | 6-520 |
| Cow position: | chrX:41847748-41847245 (view UCSC Genome Browser custom track) |
| Alignm length: | 520 |
| Alignm identity: | 395 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 144, 27 |
| Conread position: | 7-533 |
| Cow position: | chrX:42222981-42222470 (view UCSC Genome Browser custom track) |
| Alignm length: | 536 |
| Alignm identity: | 412 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 179, 51 |
| Conread position: | 8-521 |
| Cow position: | chrX:35287208-35287714 (view UCSC Genome Browser custom track) |
| Alignm length: | 523 |
| Alignm identity: | 386 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 177, 14 |
| Conread position: | 15-540 |
| Cow position: | chrX:25282705-25282181 (view UCSC Genome Browser custom track) |
| Alignm length: | 539 |
| Alignm identity: | 376 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 150, 83 |
| Conread position: | 25-533 |
| Cow position: | chrX:4406684-4407184 (view UCSC Genome Browser custom track) |
| Alignm length: | 515 |
| Alignm identity: | 371 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 171, 82 |
| Conread position: | 40-535 |
| Cow position: | chrX:45401188-45400717 (view UCSC Genome Browser custom track) |
| Alignm length: | 502 |
| Alignm identity: | 360 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 80, 67 |
| Conread position: | 57-495 |
| Cow position: | chrX:17890020-17889600 (view UCSC Genome Browser custom track) |
| Alignm length: | 441 |
| Alignm identity: | 338 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 139, 50 |
| Conread position: | 66-529 |
| Cow position: | chrX:6406196-6406647 (view UCSC Genome Browser custom track) |
| Alignm length: | 471 |
| Alignm identity: | 340 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 19, 42 |
| Conread position: | 71-494 |
| Cow position: | chrX:47380666-47380241 (view UCSC Genome Browser custom track) |
| Alignm length: | 441 |
| Alignm identity: | 312 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 106, 36 |
| Conread position: | 116-541 |
| Cow position: | chrX:12289624-12290028 (view UCSC Genome Browser custom track) |
| Alignm length: | 431 |
| Alignm identity: | 300 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 21, 75 |
| Conread position: | 130-536 |
| Cow position: | chrX:41791816-41791404 (view UCSC Genome Browser custom track) |
| Alignm length: | 425 |
| Alignm identity: | 324 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 56, 277 |
| Conread position: | 136-541 |
| Cow position: | chrX:13430877-13430475 (view UCSC Genome Browser custom track) |
| Alignm length: | 420 |
| Alignm identity: | 280 |
| Alignm E-value: | 6e-36 |
| Alignm gaps (pig, cow): | 54, 83 |
| Conread position: | 163-533 |
| Cow position: | chrX:33804050-33803696 (view UCSC Genome Browser custom track) |
| Alignm length: | 378 |
| Alignm identity: | 280 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 25, 115 |
| Conread position: | 180-494 |
| Cow position: | chrX:35608949-35609245 (view UCSC Genome Browser custom track) |
| Alignm length: | 317 |
| Alignm identity: | 231 |
| Alignm E-value: | 1.96182e-44 |
| Alignm gaps (pig, cow): | 71, 110 |
| Conread position: | 185-532 |
| Cow position: | chrX:25405414-25405073 (view UCSC Genome Browser custom track) |
| Alignm length: | 356 |
| Alignm identity: | 229 |
| Alignm E-value: | 5e-23 |
| Alignm gaps (pig, cow): | 20, 83 |
| Conread position: | 186-536 |
| Cow position: | chrX:15040101-15039770 (view UCSC Genome Browser custom track) |
| Alignm length: | 352 |
| Alignm identity: | 243 |
| Alignm E-value: | 8.99999e-40 |
| Alignm gaps (pig, cow): | 126, 61 |
| Conread position: | 192-533 |
| Cow position: | chrX:41734216-41733888 (view UCSC Genome Browser custom track) |
| Alignm length: | 351 |
| Alignm identity: | 254 |
| Alignm E-value: | 9.94922e-44 |
| Alignm gaps (pig, cow): | 59, 78 |
| Conread position: | 203-532 |
| Cow position: | chrX:28867037-28866714 (view UCSC Genome Browser custom track) |
| Alignm length: | 338 |
| Alignm identity: | 242 |
| Alignm E-value: | 1.4013e-45 |
| Alignm gaps (pig, cow): | 53, 201 |
| Conread position: | 222-492 |
| Cow position: | chrX:41879922-41879659 (view UCSC Genome Browser custom track) |
| Alignm length: | 274 |
| Alignm identity: | 217 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 29, 51 |
| Conread position: | 250-521 |
| Cow position: | chrX:28156566-28156817 (view UCSC Genome Browser custom track) |
| Alignm length: | 272 |
| Alignm identity: | 200 |
| Alignm E-value: | 7e-38 |
| Alignm gaps (pig, cow): | 15, 0 |
| Conread position: | 258-539 |
| Cow position: | chrX:23415661-23415384 (view UCSC Genome Browser custom track) |
| Alignm length: | 291 |
| Alignm identity: | 218 |
| Alignm E-value: | 5.04467e-44 |
| Alignm gaps (pig, cow): | 53, 38 |
| Conread position: | 354-533 |
| Cow position: | chrX:32419298-32419478 (view UCSC Genome Browser custom track) |
| Alignm length: | 185 |
| Alignm identity: | 135 |
| Alignm E-value: | 2e-23 |
| Alignm gaps (pig, cow): | 34, 90 |
Show alignments to all cow chromosomes.