• Home
• Research
• Resources
• Publications
• About
• People
• Events
• Jobs
• News
• Contact

Cow genome map

           
Conread name:
           
Utr1-UTR01D100091
        

               
Conread position:
               
254-555
               

               
Cow position:
               
chr3:30266814-30266505 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
316
               

               
Alignm identity:
               
212
               

               
Alignm E-value:
               
1e-26
               

               
Alignm gaps (pig, cow):
               
91, 16
               

               
Conread position:
               
255-530
               

               
Cow position:
               
chr3:8393235-8393499 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
277
               

               
Alignm identity:
               
197
               

               
Alignm E-value:
               
3e-36
               

               
Alignm gaps (pig, cow):
               
46, 15
               

               
Conread position:
               
255-543
               

               
Cow position:
               
chr3:60597427-60597709 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
293
               

               
Alignm identity:
               
203
               

               
Alignm E-value:
               
2e-33
               

               
Alignm gaps (pig, cow):
               
14, 80
               

               
Conread position:
               
255-547
               

               
Cow position:
               
chr3:77581993-77582282 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
298
               

               
Alignm identity:
               
197
               

               
Alignm E-value:
               
3e-25
               

               
Alignm gaps (pig, cow):
               
36, 14
               

               
Conread position:
               
255-554
               

               
Cow position:
               
chr3:58765195-58764903 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
306
               

               
Alignm identity:
               
209
               

               
Alignm E-value:
               
2e-30
               

               
Alignm gaps (pig, cow):
               
71, 14
               

               
Conread position:
               
255-559
               

               
Cow position:
               
chr3:53384400-53384093 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
312
               

               
Alignm identity:
               
213
               

               
Alignm E-value:
               
1e-36
               

               
Alignm gaps (pig, cow):
               
61, 14
               

               
Conread position:
               
255-562
               

               
Cow position:
               
chr3:58527270-58527568 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
311
               

               
Alignm identity:
               
216
               

               
Alignm E-value:
               
4e-38
               

               
Alignm gaps (pig, cow):
               
68, 134
               

               
Conread position:
               
256-532
               

               
Cow position:
               
chr3:75158247-75158516 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
282
               

               
Alignm identity:
               
194
               

               
Alignm E-value:
               
4e-28
               

               
Alignm gaps (pig, cow):
               
60, 30
               

               
Conread position:
               
256-548
               

               
Cow position:
               
chr3:5696842-5696552 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
301
               

               
Alignm identity:
               
198
               

               
Alignm E-value:
               
2e-21
               

               
Alignm gaps (pig, cow):
               
166, 30
               

               
Conread position:
               
256-552
               

               
Cow position:
               
chr3:2393075-2392788 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
300
               

               
Alignm identity:
               
211
               

               
Alignm E-value:
               
3e-37
               

               
Alignm gaps (pig, cow):
               
153, 30
               

               
Conread position:
               
256-556
               

               
Cow position:
               
chr3:27274417-27274712 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
303
               

               
Alignm identity:
               
198
               

               
Alignm E-value:
               
4e-28
               

               
Alignm gaps (pig, cow):
               
171, 61
               

               
Conread position:
               
256-570
               

               
Cow position:
               
chr3:20043707-20043392 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
319
               

               
Alignm identity:
               
215
               

               
Alignm E-value:
               
3e-37
               

               
Alignm gaps (pig, cow):
               
176, 76
               

               
Conread position:
               
258-531
               

               
Cow position:
               
chr3:11987215-11987488 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
278
               

               
Alignm identity:
               
191
               

               
Alignm E-value:
               
2e-33
               

               
Alignm gaps (pig, cow):
               
11, 58
               

               
Conread position:
               
258-552
               

               
Cow position:
               
chr3:24615952-24615656 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
310
               

               
Alignm identity:
               
210
               

               
Alignm E-value:
               
2e-23
               

               
Alignm gaps (pig, cow):
               
33, 12
               

               
Conread position:
               
258-556
               

               
Cow position:
               
chr3:45700693-45700987 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
301
               

               
Alignm identity:
               
196
               

               
Alignm E-value:
               
1e-26
               

               
Alignm gaps (pig, cow):
               
43, 11
               

               
Conread position:
               
258-565
               

               
Cow position:
               
chr3:72473799-72474124 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
326
               

               
Alignm identity:
               
232
               

               
Alignm E-value:
               
1.99965e-42
               

               
Alignm gaps (pig, cow):
               
15, 0
               

               
Conread position:
               
258-580
               

               
Cow position:
               
chr3:174834-175156 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
330
               

               
Alignm identity:
               
220
               

               
Alignm E-value:
               
2e-31
               

               
Alignm gaps (pig, cow):
               
11, 67
               

               
Conread position:
               
261-479
               

               
Cow position:
               
chr3:32457085-32457302 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
221
               

               
Alignm identity:
               
155
               

               
Alignm E-value:
               
4e-28
               

               
Alignm gaps (pig, cow):
               
69, 32
               

               
Conread position:
               
261-509
               

               
Cow position:
               
chr3:39066223-39066471 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
253
               

               
Alignm identity:
               
174
               

               
Alignm E-value:
               
5e-29
               

               
Alignm gaps (pig, cow):
               
37, 58
               

               
Conread position:
               
261-554
               

               
Cow position:
               
chr3:48252769-48253062 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
301
               

               
Alignm identity:
               
216
               

               
Alignm E-value:
               
7.00649e-43
               

               
Alignm gaps (pig, cow):
               
28, 206
               

               
Conread position:
               
262-475
               

               
Cow position:
               
chr3:49790924-49790707 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
218
               

               
Alignm identity:
               
152
               

               
Alignm E-value:
               
4e-28
               

               
Alignm gaps (pig, cow):
               
39, 0
               

               
Conread position:
               
262-480
               

               
Cow position:
               
chr3:81471209-81470988 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
226
               

               
Alignm identity:
               
166
               

               
Alignm E-value:
               
6e-32
               

               
Alignm gaps (pig, cow):
               
16, 57
               

               
Conread position:
               
262-516
               

               
Cow position:
               
chr3:73820484-73820217 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
272
               

               
Alignm identity:
               
195
               

               
Alignm E-value:
               
6e-32
               

               
Alignm gaps (pig, cow):
               
43, 77
               

               
Conread position:
               
262-523
               

               
Cow position:
               
chr3:17957351-17957613 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
268
               

               
Alignm identity:
               
181
               

               
Alignm E-value:
               
1e-26
               

               
Alignm gaps (pig, cow):
               
25, 166
               

               
Conread position:
               
262-530
               

               
Cow position:
               
chr3:68627797-68627528 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
272
               

               
Alignm identity:
               
173
               

               
Alignm E-value:
               
6e-21
               

               
Alignm gaps (pig, cow):
               
160, 136
               

               
Conread position:
               
262-532
               

               
Cow position:
               
chr3:18393502-18393241 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
276
               

               
Alignm identity:
               
200
               

               
Alignm E-value:
               
8e-35
               

               
Alignm gaps (pig, cow):
               
25, 54
               

               
Conread position:
               
262-532
               

               
Cow position:
               
chr3:53046773-53046497 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
281
               

               
Alignm identity:
               
207
               

               
Alignm E-value:
               
1.99965e-42
               

               
Alignm gaps (pig, cow):
               
47, 120
               

               
Conread position:
               
262-550
               

               
Cow position:
               
chr3:2506590-2506297 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
297
               

               
Alignm identity:
               
209
               

               
Alignm E-value:
               
4e-39
               

               
Alignm gaps (pig, cow):
               
61, 31
               

               
Conread position:
               
262-553
               

               
Cow position:
               
chr3:57754591-57754294 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
301
               

               
Alignm identity:
               
203
               

               
Alignm E-value:
               
6e-32
               

               
Alignm gaps (pig, cow):
               
47, 224
               

               
Conread position:
               
262-553
               

               
Cow position:
               
chr3:71231284-71231580 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
301
               

               
Alignm identity:
               
222
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
26, 59
               

               
Conread position:
               
262-554
               

               
Cow position:
               
chr3:59034923-59035231 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
310
               

               
Alignm identity:
               
216
               

               
Alignm E-value:
               
8e-35
               

               
Alignm gaps (pig, cow):
               
57, 31
               

               
Conread position:
               
262-555
               

               
Cow position:
               
chr3:2036185-2036488 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
309
               

               
Alignm identity:
               
212
               

               
Alignm E-value:
               
2e-30
               

               
Alignm gaps (pig, cow):
               
65, 39
               

               
Conread position:
               
262-556
               

               
Cow position:
               
chr3:53910000-53910296 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
299
               

               
Alignm identity:
               
213
               

               
Alignm E-value:
               
1.4013e-45
               

               
Alignm gaps (pig, cow):
               
166, 73
               

               
Conread position:
               
262-579
               

               
Cow position:
               
chr3:39661564-39661245 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
323
               

               
Alignm identity:
               
215
               

               
Alignm E-value:
               
3e-35
               

               
Alignm gaps (pig, cow):
               
166, 60
               

               
Conread position:
               
262-582
               

               
Cow position:
               
chr3:15153576-15153902 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
331
               

               
Alignm identity:
               
235
               

               
Alignm E-value:
               
1.4013e-45
               

               
Alignm gaps (pig, cow):
               
45, 208
               

               
Conread position:
               
262-597
               

               
Cow position:
               
chr3:65236911-65237248 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
343
               

               
Alignm identity:
               
233
               

               
Alignm E-value:
               
1e-39
               

               
Alignm gaps (pig, cow):
               
28, 66
               

               
Conread position:
               
263-544
               

               
Cow position:
               
chr3:73395008-73395288 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
286
               

               
Alignm identity:
               
209
               

               
Alignm E-value:
               
2.8026e-45
               

               
Alignm gaps (pig, cow):
               
68, 30
               

               
Conread position:
               
263-549
               

               
Cow position:
               
chr3:53150215-53150512 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
300
               

               
Alignm identity:
               
204
               

               
Alignm E-value:
               
2e-30
               

               
Alignm gaps (pig, cow):
               
52, 30
               

               
Conread position:
               
263-555
               

               
Cow position:
               
chr3:67929374-67929076 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
305
               

               
Alignm identity:
               
207
               

               
Alignm E-value:
               
5e-29
               

               
Alignm gaps (pig, cow):
               
24, 75
               

               
Conread position:
               
264-543
               

               
Cow position:
               
chr3:74533240-74533506 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
282
               

               
Alignm identity:
               
188
               

               
Alignm E-value:
               
2e-23
               

               
Alignm gaps (pig, cow):
               
42, 70
               

               
Conread position:
               
264-555
               

               
Cow position:
               
chr3:30940700-30940994 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
299
               

               
Alignm identity:
               
197
               

               
Alignm E-value:
               
3e-26
               

               
Alignm gaps (pig, cow):
               
64, 29
               

               
Conread position:
               
264-565
               

               
Cow position:
               
chr3:22668302-22668605 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
308
               

               
Alignm identity:
               
206
               

               
Alignm E-value:
               
2e-32
               

               
Alignm gaps (pig, cow):
               
23, 60
               

               
Conread position:
               
265-549
               

               
Cow position:
               
chr3:2648624-2648330 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
296
               

               
Alignm identity:
               
221
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
17, 75
               

               
Conread position:
               
265-551
               

               
Cow position:
               
chr3:63316023-63316307 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
291
               

               
Alignm identity:
               
196
               

               
Alignm E-value:
               
5e-30
               

               
Alignm gaps (pig, cow):
               
52, 28
               

               
Conread position:
               
265-551
               

               
Cow position:
               
chr3:65058590-65058879 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
295
               

               
Alignm identity:
               
218
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
36, 63
               

               
Conread position:
               
265-556
               

               
Cow position:
               
chr3:15388103-15388405 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
307
               

               
Alignm identity:
               
209
               

               
Alignm E-value:
               
5e-29
               

               
Alignm gaps (pig, cow):
               
22, 71
               

               
Conread position:
               
265-556
               

               
Cow position:
               
chr3:51609289-51608997 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
298
               

               
Alignm identity:
               
218
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
27, 50
               

               
Conread position:
               
265-576
               

               
Cow position:
               
chr3:59702066-59702379 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
319
               

               
Alignm identity:
               
218
               

               
Alignm E-value:
               
1e-38
               

               
Alignm gaps (pig, cow):
               
163, 69
               

               
Conread position:
               
266-497
               

               
Cow position:
               
chr3:27727936-27727708 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
235
               

               
Alignm identity:
               
164
               

               
Alignm E-value:
               
3e-26
               

               
Alignm gaps (pig, cow):
               
49, 61
               

               
Conread position:
               
268-557
               

               
Cow position:
               
chr3:59945017-59945313 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
299
               

               
Alignm identity:
               
205
               

               
Alignm E-value:
               
3e-35
               

               
Alignm gaps (pig, cow):
               
19, 67
               

               
Conread position:
               
268-579
               

               
Cow position:
               
chr3:22844799-22845112 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
318
               

               
Alignm identity:
               
205
               

               
Alignm E-value:
               
1e-25
               

               
Alignm gaps (pig, cow):
               
47, 6
               

               
Conread position:
               
270-531
               

               
Cow position:
               
chr3:12978716-12978455 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
266
               

               
Alignm identity:
               
188
               

               
Alignm E-value:
               
3e-36
               

               
Alignm gaps (pig, cow):
               
154, 52
               

               
Conread position:
               
270-542
               

               
Cow position:
               
chr3:49996823-49996546 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
280
               

               
Alignm identity:
               
205
               

               
Alignm E-value:
               
8.40779e-45
               

               
Alignm gaps (pig, cow):
               
103, 53
               

               
Conread position:
               
270-543
               

               
Cow position:
               
chr3:64010908-64010636 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
282
               

               
Alignm identity:
               
197
               

               
Alignm E-value:
               
2e-31
               

               
Alignm gaps (pig, cow):
               
15, 44
               

               
Conread position:
               
272-559
               

               
Cow position:
               
chr3:56678450-56678160 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
296
               

               
Alignm identity:
               
219
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
42, 14
               

               
Conread position:
               
275-556
               

               
Cow position:
               
chr3:18067047-18067315 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
286
               

               
Alignm identity:
               
203
               

               
Alignm E-value:
               
6e-32
               

               
Alignm gaps (pig, cow):
               
153, 27
               

               
Conread position:
               
276-569
               

               
Cow position:
               
chr3:11229459-11229174 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
296
               

               
Alignm identity:
               
213
               

               
Alignm E-value:
               
2.00386e-43
               

               
Alignm gaps (pig, cow):
               
155, 25
               

               
Conread position:
               
279-530
               

               
Cow position:
               
chr3:59040479-59040729 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
255
               

               
Alignm identity:
               
183
               

               
Alignm E-value:
               
1e-36
               

               
Alignm gaps (pig, cow):
               
156, 35
               

               
Conread position:
               
287-555
               

               
Cow position:
               
chr3:81234309-81234572 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
271
               

               
Alignm identity:
               
196
               

               
Alignm E-value:
               
5e-40
               

               
Alignm gaps (pig, cow):
               
139, 14
               

               
Conread position:
               
290-555
               

               
Cow position:
               
chr3:48900410-48900146 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
270
               

               
Alignm identity:
               
202
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
137, 33
               

               
Conread position:
               
291-556
               

               
Cow position:
               
chr3:83889171-83889440 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
276
               

               
Alignm identity:
               
206
               

               
Alignm E-value:
               
1.96182e-44
               

               
Alignm gaps (pig, cow):
               
135, 21
               

               
Conread position:
               
295-554
               

               
Cow position:
               
chr3:59933295-59933563 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
271
               

               
Alignm identity:
               
180
               

               
Alignm E-value:
               
8e-24
               

               
Alignm gaps (pig, cow):
               
156, 39
               

               
Conread position:
               
297-563
               

               
Cow position:
               
chr3:13380347-13380086 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
269
               

               
Alignm identity:
               
193
               

               
Alignm E-value:
               
4e-39
               

               
Alignm gaps (pig, cow):
               
131, 16
               

               
Conread position:
               
299-532
               

               
Cow position:
               
chr3:7566491-7566260 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
237
               

               
Alignm identity:
               
177
               

               
Alignm E-value:
               
2e-40
               

               
Alignm gaps (pig, cow):
               
31, 166
               

               
Conread position:
               
299-556
               

               
Cow position:
               
chr3:23471533-23471278 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
261
               

               
Alignm identity:
               
190
               

               
Alignm E-value:
               
4.99997e-41
               

               
Alignm gaps (pig, cow):
               
26, 166
               

               
Conread position:
               
299-556
               

               
Cow position:
               
chr3:65969095-65969355 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
266
               

               
Alignm identity:
               
194
               

               
Alignm E-value:
               
4e-39
               

               
Alignm gaps (pig, cow):
               
127, 33
               

               
Conread position:
               
301-523
               

               
Cow position:
               
chr3:45279395-45279621 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
228
               

               
Alignm identity:
               
158
               

               
Alignm E-value:
               
4e-27
               

               
Alignm gaps (pig, cow):
               
42, 27
               

               
Conread position:
               
301-530
               

               
Cow position:
               
chr3:18185004-18185236 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
235
               

               
Alignm identity:
               
162
               

               
Alignm E-value:
               
4e-27
               

               
Alignm gaps (pig, cow):
               
17, 32
               

               
Conread position:
               
301-551
               

               
Cow position:
               
chr3:30438804-30438550 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
259
               

               
Alignm identity:
               
182
               

               
Alignm E-value:
               
2e-30
               

               
Alignm gaps (pig, cow):
               
40, 22
               

               
Conread position:
               
301-582
               

               
Cow position:
               
chr3:26992500-26992780 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
286
               

               
Alignm identity:
               
198
               

               
Alignm E-value:
               
8e-35
               

               
Alignm gaps (pig, cow):
               
125, 31
               

               
Conread position:
               
302-530
               

               
Cow position:
               
chr3:8564934-8564700 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
237
               

               
Alignm identity:
               
160
               

               
Alignm E-value:
               
6e-22
               

               
Alignm gaps (pig, cow):
               
97, 29
               

               
Conread position:
               
302-543
               

               
Cow position:
               
chr3:78092579-78092339 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
245
               

               
Alignm identity:
               
172
               

               
Alignm E-value:
               
2e-31
               

               
Alignm gaps (pig, cow):
               
124, 21
               

               
Conread position:
               
302-552
               

               
Cow position:
               
chr3:31361352-31361604 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
259
               

               
Alignm identity:
               
182
               

               
Alignm E-value:
               
2e-29
               

               
Alignm gaps (pig, cow):
               
68, 13
               

               
Conread position:
               
302-556
               

               
Cow position:
               
chr3:13241146-13240887 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
263
               

               
Alignm identity:
               
181
               

               
Alignm E-value:
               
1e-28
               

               
Alignm gaps (pig, cow):
               
20, 30
               

               
Conread position:
               
302-557
               

               
Cow position:
               
chr3:59610786-59610527 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
264
               

               
Alignm identity:
               
187
               

               
Alignm E-value:
               
2e-33
               

               
Alignm gaps (pig, cow):
               
124, 15
               

               
Conread position:
               
303-507
               

               
Cow position:
               
chr3:31206806-31207015 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
212
               

               
Alignm identity:
               
150
               

               
Alignm E-value:
               
3e-25
               

               
Alignm gaps (pig, cow):
               
12, 31
               

               
Conread position:
               
303-519
               

               
Cow position:
               
chr3:18144188-18143965 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
224
               

               
Alignm identity:
               
159
               

               
Alignm E-value:
               
5e-30
               

               
Alignm gaps (pig, cow):
               
40, 0
               

               
Conread position:
               
303-531
               

               
Cow position:
               
chr3:74079701-74079478 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
231
               

               
Alignm identity:
               
161
               

               
Alignm E-value:
               
1e-26
               

               
Alignm gaps (pig, cow):
               
123, 14
               

               
Conread position:
               
303-592
               

               
Cow position:
               
chr3:12705611-12705328 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
292
               

               
Alignm identity:
               
198
               

               
Alignm E-value:
               
2e-31
               

               
Alignm gaps (pig, cow):
               
119, 37
               

               
Conread position:
               
304-532
               

               
Cow position:
               
chr3:66900802-66900566 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
239
               

               
Alignm identity:
               
184
               

               
Alignm E-value:
               
2.00386e-43
               

               
Alignm gaps (pig, cow):
               
15, 30
               

               
Conread position:
               
304-552
               

               
Cow position:
               
chr3:16752325-16752073 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
255
               

               
Alignm identity:
               
176
               

               
Alignm E-value:
               
2e-30
               

               
Alignm gaps (pig, cow):
               
122, 28
               

               
Conread position:
               
304-554
               

               
Cow position:
               
chr3:75479935-75480181 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
254
               

               
Alignm identity:
               
171
               

               
Alignm E-value:
               
3e-24
               

               
Alignm gaps (pig, cow):
               
123, 79
               

               
Conread position:
               
304-555
               

               
Cow position:
               
chr3:22165482-22165225 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
260
               

               
Alignm identity:
               
185
               

               
Alignm E-value:
               
3e-35
               

               
Alignm gaps (pig, cow):
               
122, 28
               

               
Conread position:
               
304-562
               

               
Cow position:
               
chr3:52608115-52608369 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
261
               

               
Alignm identity:
               
178
               

               
Alignm E-value:
               
5e-29
               

               
Alignm gaps (pig, cow):
               
122, 36
               

               
Conread position:
               
305-459
               

               
Cow position:
               
chr3:2216300-2216457 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
158
               

               
Alignm identity:
               
116
               

               
Alignm E-value:
               
2e-23
               

               
Alignm gaps (pig, cow):
               
36, 0
               

               
Conread position:
               
305-532
               

               
Cow position:
               
chr3:55970442-55970676 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
238
               

               
Alignm identity:
               
182
               

               
Alignm E-value:
               
6.00036e-42
               

               
Alignm gaps (pig, cow):
               
123, 10
               

               
Conread position:
               
305-549
               

               
Cow position:
               
chr3:54506642-54506884 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
247
               

               
Alignm identity:
               
172
               

               
Alignm E-value:
               
2e-31
               

               
Alignm gaps (pig, cow):
               
121, 18
               

               
Conread position:
               
305-552
               

               
Cow position:
               
chr3:72342179-72342434 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
257
               

               
Alignm identity:
               
193
               

               
Alignm E-value:
               
2.8026e-45
               

               
Alignm gaps (pig, cow):
               
132, 27
               

               
Conread position:
               
305-555
               

               
Cow position:
               
chr3:30180017-30180266 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
256
               

               
Alignm identity:
               
194
               

               
Alignm E-value:
               
1.96182e-44
               

               
Alignm gaps (pig, cow):
               
12, 26
               

               
Conread position:
               
305-556
               

               
Cow position:
               
chr3:19792840-19793082 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
255
               

               
Alignm identity:
               
188
               

               
Alignm E-value:
               
1e-36
               

               
Alignm gaps (pig, cow):
               
123, 21
               

               
Conread position:
               
305-559
               

               
Cow position:
               
chr3:24548905-24548645 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
262
               

               
Alignm identity:
               
179
               

               
Alignm E-value:
               
5e-30
               

               
Alignm gaps (pig, cow):
               
38, 165
               

               
Conread position:
               
305-563
               

               
Cow position:
               
chr3:79098032-79098290 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
264
               

               
Alignm identity:
               
176
               

               
Alignm E-value:
               
8e-24
               

               
Alignm gaps (pig, cow):
               
39, 26
               

               
Conread position:
               
305-569
               

               
Cow position:
               
chr3:45667410-45667146 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
271
               

               
Alignm identity:
               
204
               

               
Alignm E-value:
               
1.4013e-45
               

               
Alignm gaps (pig, cow):
               
104, 25
               

               
Conread position:
               
305-575
               

               
Cow position:
               
chr3:15954153-15953882 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
277
               

               
Alignm identity:
               
193
               

               
Alignm E-value:
               
8e-34
               

               
Alignm gaps (pig, cow):
               
17, 29
               

               
Conread position:
               
306-477
               

               
Cow position:
               
chr3:57760436-57760605 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
174
               

               
Alignm identity:
               
135
               

               
Alignm E-value:
               
6e-32
               

               
Alignm gaps (pig, cow):
               
122, 15
               

               
Conread position:
               
306-493
               

               
Cow position:
               
chr3:59621711-59621526 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
190
               

               
Alignm identity:
               
147
               

               
Alignm E-value:
               
3e-34
               

               
Alignm gaps (pig, cow):
               
116, 8
               

               
Conread position:
               
306-519
               

               
Cow position:
               
chr3:74134636-74134855 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
222
               

               
Alignm identity:
               
163
               

               
Alignm E-value:
               
2e-32
               

               
Alignm gaps (pig, cow):
               
28, 189
               

               
Conread position:
               
306-532
               

               
Cow position:
               
chr3:19793656-19793429 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
229
               

               
Alignm identity:
               
176
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
120, 107
               

               
Conread position:
               
306-532
               

               
Cow position:
               
chr3:25690726-25690961 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
237
               

               
Alignm identity:
               
163
               

               
Alignm E-value:
               
3e-24
               

               
Alignm gaps (pig, cow):
               
13, 23
               

               
Conread position:
               
306-537
               

               
Cow position:
               
chr3:2483938-2484167 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
236
               

               
Alignm identity:
               
177
               

               
Alignm E-value:
               
1e-37
               

               
Alignm gaps (pig, cow):
               
14, 27
               

               
Conread position:
               
306-542
               

               
Cow position:
               
chr3:37041351-37041592 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
242
               

               
Alignm identity:
               
183
               

               
Alignm E-value:
               
2.8026e-45
               

               
Alignm gaps (pig, cow):
               
8, 0
               

               
Conread position:
               
306-550
               

               
Cow position:
               
chr3:64526782-64527030 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
252
               

               
Alignm identity:
               
174
               

               
Alignm E-value:
               
4e-28
               

               
Alignm gaps (pig, cow):
               
15, 27
               

               
Conread position:
               
306-552
               

               
Cow position:
               
chr3:67520235-67519995 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
253
               

               
Alignm identity:
               
188
               

               
Alignm E-value:
               
1e-36
               

               
Alignm gaps (pig, cow):
               
11, 27
               

               
Conread position:
               
306-554
               

               
Cow position:
               
chr3:54067733-54067977 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
253
               

               
Alignm identity:
               
187
               

               
Alignm E-value:
               
4e-39
               

               
Alignm gaps (pig, cow):
               
120, 17
               

               
Conread position:
               
306-555
               

               
Cow position:
               
chr3:27697043-27696780 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
267
               

               
Alignm identity:
               
190
               

               
Alignm E-value:
               
5e-30
               

               
Alignm gaps (pig, cow):
               
129, 29
               

               
Conread position:
               
306-556
               

               
Cow position:
               
chr3:34871501-34871758 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
259
               

               
Alignm identity:
               
190
               

               
Alignm E-value:
               
6.00036e-42
               

               
Alignm gaps (pig, cow):
               
17, 27
               

               
Conread position:
               
306-556
               

               
Cow position:
               
chr3:59604780-59605034 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
261
               

               
Alignm identity:
               
191
               

               
Alignm E-value:
               
1e-36
               

               
Alignm gaps (pig, cow):
               
9, 30
               

               
Conread position:
               
306-556
               

               
Cow position:
               
chr3:75050685-75050438 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
255
               

               
Alignm identity:
               
184
               

               
Alignm E-value:
               
3e-35
               

               
Alignm gaps (pig, cow):
               
23, 93
               

               
Conread position:
               
306-562
               

               
Cow position:
               
chr3:54434911-54435159 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
258
               

               
Alignm identity:
               
186
               

               
Alignm E-value:
               
3e-36
               

               
Alignm gaps (pig, cow):
               
11, 27
               

               
Conread position:
               
306-562
               

               
Cow position:
               
chr3:70676158-70676429 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
273
               

               
Alignm identity:
               
190
               

               
Alignm E-value:
               
5e-29
               

               
Alignm gaps (pig, cow):
               
61, 26
               

               
Conread position:
               
306-563
               

               
Cow position:
               
chr3:54782073-54781800 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
277
               

               
Alignm identity:
               
191
               

               
Alignm E-value:
               
9e-25
               

               
Alignm gaps (pig, cow):
               
47, 25
               

               
Conread position:
               
306-565
               

               
Cow position:
               
chr3:14601775-14601507 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
272
               

               
Alignm identity:
               
195
               

               
Alignm E-value:
               
8e-35
               

               
Alignm gaps (pig, cow):
               
76, 14
               

               
Conread position:
               
306-565
               

               
Cow position:
               
chr3:58134753-58134491 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
266
               

               
Alignm identity:
               
196
               

               
Alignm E-value:
               
2.00386e-43
               

               
Alignm gaps (pig, cow):
               
16, 27
               

               
Conread position:
               
306-565
               

               
Cow position:
               
chr3:79813542-79813810 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
271
               

               
Alignm identity:
               
186
               

               
Alignm E-value:
               
4e-28
               

               
Alignm gaps (pig, cow):
               
37, 248
               

               
Conread position:
               
306-567
               

               
Cow position:
               
chr3:54551779-54551508 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
274
               

               
Alignm identity:
               
197
               

               
Alignm E-value:
               
9e-36
               

               
Alignm gaps (pig, cow):
               
9, 28
               

               
Conread position:
               
306-570
               

               
Cow position:
               
chr3:2674964-2675231 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
270
               

               
Alignm identity:
               
196
               

               
Alignm E-value:
               
7.00649e-43
               

               
Alignm gaps (pig, cow):
               
14, 8
               

               
Conread position:
               
306-573
               

               
Cow position:
               
chr3:30463236-30462973 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
273
               

               
Alignm identity:
               
200
               

               
Alignm E-value:
               
5e-40
               

               
Alignm gaps (pig, cow):
               
58, 26
               

               
Conread position:
               
306-576
               

               
Cow position:
               
chr3:18059637-18059909 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
276
               

               
Alignm identity:
               
211
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
71, 26
               

               
Conread position:
               
306-576
               

               
Cow position:
               
chr3:32569787-32570073 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
288
               

               
Alignm identity:
               
198
               

               
Alignm E-value:
               
4e-28
               

               
Alignm gaps (pig, cow):
               
45, 22
               

               
Conread position:
               
307-473
               

               
Cow position:
               
chr3:33693757-33693922 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
169
               

               
Alignm identity:
               
127
               

               
Alignm E-value:
               
3e-26
               

               
Alignm gaps (pig, cow):
               
119, 19
               

               
Conread position:
               
307-480
               

               
Cow position:
               
chr3:22509962-22510135 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
175
               

               
Alignm identity:
               
130
               

               
Alignm E-value:
               
5e-29
               

               
Alignm gaps (pig, cow):
               
13, 34
               

               
Conread position:
               
307-481
               

               
Cow position:
               
chr3:12711981-12711804 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
178
               

               
Alignm identity:
               
135
               

               
Alignm E-value:
               
2e-31
               

               
Alignm gaps (pig, cow):
               
23, 0
               

               
Conread position:
               
307-519
               

               
Cow position:
               
chr3:53739249-53739049 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
216
               

               
Alignm identity:
               
158
               

               
Alignm E-value:
               
1e-25
               

               
Alignm gaps (pig, cow):
               
16, 7
               

               
Conread position:
               
307-522
               

               
Cow position:
               
chr3:76932168-76931965 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
219
               

               
Alignm identity:
               
161
               

               
Alignm E-value:
               
1e-26
               

               
Alignm gaps (pig, cow):
               
11, 26
               

               
Conread position:
               
307-532
               

               
Cow position:
               
chr3:4319648-4319880 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
235
               

               
Alignm identity:
               
175
               

               
Alignm E-value:
               
1e-37
               

               
Alignm gaps (pig, cow):
               
120, 7
               

               
Conread position:
               
307-532
               

               
Cow position:
               
chr3:51234158-51233943 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
228
               

               
Alignm identity:
               
169
               

               
Alignm E-value:
               
8e-34
               

               
Alignm gaps (pig, cow):
               
124, 25
               

               
Conread position:
               
307-532
               

               
Cow position:
               
chr3:59718779-59719011 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
236
               

               
Alignm identity:
               
162
               

               
Alignm E-value:
               
6e-22
               

               
Alignm gaps (pig, cow):
               
45, 7
               

               
Conread position:
               
307-532
               

               
Cow position:
               
chr3:65019929-65019692 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
243
               

               
Alignm identity:
               
172
               

               
Alignm E-value:
               
9e-25
               

               
Alignm gaps (pig, cow):
               
119, 25
               

               
Conread position:
               
307-532
               

               
Cow position:
               
chr3:70334758-70334531 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
230
               

               
Alignm identity:
               
174
               

               
Alignm E-value:
               
6.00036e-42
               

               
Alignm gaps (pig, cow):
               
124, 16
               

               
Conread position:
               
307-541
               

               
Cow position:
               
chr3:14801678-14801919 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
242
               

               
Alignm identity:
               
171
               

               
Alignm E-value:
               
2e-32
               

               
Alignm gaps (pig, cow):
               
35, 0
               

               
Conread position:
               
307-543
               

               
Cow position:
               
chr3:73961763-73961522 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
244
               

               
Alignm identity:
               
170
               

               
Alignm E-value:
               
2e-29
               

               
Alignm gaps (pig, cow):
               
15, 26
               

               
Conread position:
               
307-544
               

               
Cow position:
               
chr3:11640664-11640910 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
248
               

               
Alignm identity:
               
190
               

               
Alignm E-value:
               
8.40779e-45
               

               
Alignm gaps (pig, cow):
               
13, 26
               

               
Conread position:
               
307-548
               

               
Cow position:
               
chr3:1517577-1517335 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
245
               

               
Alignm identity:
               
185
               

               
Alignm E-value:
               
1.4013e-45
               

               
Alignm gaps (pig, cow):
               
117, 175
               

               
Conread position:
               
307-548
               

               
Cow position:
               
chr3:15443793-15443549 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
246
               

               
Alignm identity:
               
195
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
119, 60
               

               
Conread position:
               
307-549
               

               
Cow position:
               
chr3:17695068-17694825 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
250
               

               
Alignm identity:
               
181
               

               
Alignm E-value:
               
8e-34
               

               
Alignm gaps (pig, cow):
               
9, 26
               

               
Conread position:
               
307-555
               

               
Cow position:
               
chr3:55318966-55318715 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
256
               

               
Alignm identity:
               
202
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
16, 27
               

               
Conread position:
               
307-556
               

               
Cow position:
               
chr3:66631416-66631158 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
261
               

               
Alignm identity:
               
188
               

               
Alignm E-value:
               
1e-36
               

               
Alignm gaps (pig, cow):
               
121, 25
               

               
Conread position:
               
307-560
               

               
Cow position:
               
chr3:14552813-14553063 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
258
               

               
Alignm identity:
               
188
               

               
Alignm E-value:
               
4e-38
               

               
Alignm gaps (pig, cow):
               
119, 16
               

               
Conread position:
               
307-561
               

               
Cow position:
               
chr3:21867101-21866843 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
264
               

               
Alignm identity:
               
195
               

               
Alignm E-value:
               
4.99997e-41
               

               
Alignm gaps (pig, cow):
               
121, 16
               

               
Conread position:
               
307-562
               

               
Cow position:
               
chr3:48241553-48241800 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
262
               

               
Alignm identity:
               
200
               

               
Alignm E-value:
               
1.99993e-41
               

               
Alignm gaps (pig, cow):
               
16, 27
               

               
Conread position:
               
307-581
               

               
Cow position:
               
chr3:83491023-83491295 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
283
               

               
Alignm identity:
               
206
               

               
Alignm E-value:
               
1e-38
               

               
Alignm gaps (pig, cow):
               
124, 16
               

               
Conread position:
               
307-602
               

               
Cow position:
               
chr3:3656450-3656750 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
305
               

               
Alignm identity:
               
229
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
119, 25
               

               
Conread position:
               
308-522
               

               
Cow position:
               
chr3:13890412-13890631 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
222
               

               
Alignm identity:
               
159
               

               
Alignm E-value:
               
5e-29
               

               
Alignm gaps (pig, cow):
               
7, 25
               

               
Conread position:
               
308-532
               

               
Cow position:
               
chr3:23920491-23920265 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
229
               

               
Alignm identity:
               
175
               

               
Alignm E-value:
               
7.00649e-43
               

               
Alignm gaps (pig, cow):
               
120, 6
               

               
Conread position:
               
308-532
               

               
Cow position:
               
chr3:57577632-57577857 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
227
               

               
Alignm identity:
               
178
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
22, 197
               

               
Conread position:
               
308-550
               

               
Cow position:
               
chr3:66014256-66014498 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
254
               

               
Alignm identity:
               
176
               

               
Alignm E-value:
               
6e-22
               

               
Alignm gaps (pig, cow):
               
119, 26
               

               
Conread position:
               
308-551
               

               
Cow position:
               
chr3:5365615-5365845 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
246
               

               
Alignm identity:
               
180
               

               
Alignm E-value:
               
2e-33
               

               
Alignm gaps (pig, cow):
               
120, 6
               

               
Conread position:
               
308-555
               

               
Cow position:
               
chr3:3985265-3985500 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
250
               

               
Alignm identity:
               
193
               

               
Alignm E-value:
               
2.00386e-43
               

               
Alignm gaps (pig, cow):
               
126, 6
               

               
Conread position:
               
308-565
               

               
Cow position:
               
chr3:75778125-75777877 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
261
               

               
Alignm identity:
               
189
               

               
Alignm E-value:
               
3e-35
               

               
Alignm gaps (pig, cow):
               
85, 26
               

               
Conread position:
               
308-576
               

               
Cow position:
               
chr3:31309417-31309145 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
275
               

               
Alignm identity:
               
207
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
118, 26
               

               
Conread position:
               
308-589
               

               
Cow position:
               
chr3:53270766-53271054 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
292
               

               
Alignm identity:
               
219
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
9, 27
               

               
Conread position:
               
309-557
               

               
Cow position:
               
chr3:83215198-83215455 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
258
               

               
Alignm identity:
               
192
               

               
Alignm E-value:
               
7.00649e-44
               

               
Alignm gaps (pig, cow):
               
16, 0
               

               
Conread position:
               
313-531
               

               
Cow position:
               
chr3:39988293-39988092 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
220
               

               
Alignm identity:
               
161
               

               
Alignm E-value:
               
3e-25
               

               
Alignm gaps (pig, cow):
               
141, 19
               

               
Conread position:
               
313-583
               

               
Cow position:
               
chr3:3556488-3556759 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
276
               

               
Alignm identity:
               
200
               

               
Alignm E-value:
               
6.00036e-42
               

               
Alignm gaps (pig, cow):
               
30, 10
               

               
Conread position:
               
314-530
               

               
Cow position:
               
chr3:52643992-52643773 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
224
               

               
Alignm identity:
               
163
               

               
Alignm E-value:
               
5e-30
               

               
Alignm gaps (pig, cow):
               
8, 18
               

               
Conread position:
               
314-532
               

               
Cow position:
               
chr3:80037587-80037373 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
223
               

               
Alignm identity:
               
154
               

               
Alignm E-value:
               
6e-22
               

               
Alignm gaps (pig, cow):
               
29, 17
               

               
Conread position:
               
314-553
               

               
Cow position:
               
chr3:59828449-59828206 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
246
               

               
Alignm identity:
               
180
               

               
Alignm E-value:
               
1e-38
               

               
Alignm gaps (pig, cow):
               
117, 12
               

               
Conread position:
               
315-524
               

               
Cow position:
               
chr3:35153561-35153759 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
212
               

               
Alignm identity:
               
150
               

               
Alignm E-value:
               
2e-22
               

               
Alignm gaps (pig, cow):
               
111, 17
               

               
Conread position:
               
315-530
               

               
Cow position:
               
chr3:10668934-10668720 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
222
               

               
Alignm identity:
               
168
               

               
Alignm E-value:
               
3e-34
               

               
Alignm gaps (pig, cow):
               
111, 8
               

               
Conread position:
               
315-531
               

               
Cow position:
               
chr3:55189811-55189590 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
222
               

               
Alignm identity:
               
155
               

               
Alignm E-value:
               
1e-27
               

               
Alignm gaps (pig, cow):
               
82, 0
               

               
Conread position:
               
315-532
               

               
Cow position:
               
chr3:19682639-19682867 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
230
               

               
Alignm identity:
               
160
               

               
Alignm E-value:
               
8e-24
               

               
Alignm gaps (pig, cow):
               
84, 17
               

               
Conread position:
               
315-547
               

               
Cow position:
               
chr3:79196703-79196939 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
238
               

               
Alignm identity:
               
162
               

               
Alignm E-value:
               
1e-26
               

               
Alignm gaps (pig, cow):
               
111, 25
               

               
Conread position:
               
315-557
               

               
Cow position:
               
chr3:27083107-27082855 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
254
               

               
Alignm identity:
               
182
               

               
Alignm E-value:
               
6e-32
               

               
Alignm gaps (pig, cow):
               
16, 53
               

               
Conread position:
               
316-480
               

               
Cow position:
               
chr3:55984044-55984208 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
167
               

               
Alignm identity:
               
125
               

               
Alignm E-value:
               
3e-26
               

               
Alignm gaps (pig, cow):
               
110, 16
               

               
Conread position:
               
316-516
               

               
Cow position:
               
chr3:38783551-38783753 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
206
               

               
Alignm identity:
               
158
               

               
Alignm E-value:
               
1e-36
               

               
Alignm gaps (pig, cow):
               
25, 15
               

               
Conread position:
               
316-532
               

               
Cow position:
               
chr3:188817-189036 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
221
               

               
Alignm identity:
               
157
               

               
Alignm E-value:
               
2e-30
               

               
Alignm gaps (pig, cow):
               
114, 16
               

               
Conread position:
               
316-532
               

               
Cow position:
               
chr3:73837772-73837557 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
221
               

               
Alignm identity:
               
157
               

               
Alignm E-value:
               
3e-26
               

               
Alignm gaps (pig, cow):
               
46, 24
               

               
Conread position:
               
316-548
               

               
Cow position:
               
chr3:7661801-7662035 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
240
               

               
Alignm identity:
               
169
               

               
Alignm E-value:
               
5e-29
               

               
Alignm gaps (pig, cow):
               
110, 16
               

               
Conread position:
               
316-551
               

               
Cow position:
               
chr3:74644502-74644739 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
241
               

               
Alignm identity:
               
180
               

               
Alignm E-value:
               
2e-40
               

               
Alignm gaps (pig, cow):
               
40, 16
               

               
Conread position:
               
316-552
               

               
Cow position:
               
chr3:20802675-20802454 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
244
               

               
Alignm identity:
               
180
               

               
Alignm E-value:
               
1e-28
               

               
Alignm gaps (pig, cow):
               
112, 16
               

               
Conread position:
               
316-555
               

               
Cow position:
               
chr3:15052003-15051768 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
243
               

               
Alignm identity:
               
181
               

               
Alignm E-value:
               
5e-40
               

               
Alignm gaps (pig, cow):
               
95, 16
               

               
Conread position:
               
316-555
               

               
Cow position:
               
chr3:31350159-31349925 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
242
               

               
Alignm identity:
               
171
               

               
Alignm E-value:
               
2e-31
               

               
Alignm gaps (pig, cow):
               
106, 19
               

               
Conread position:
               
316-555
               

               
Cow position:
               
chr3:53592743-53592503 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
244
               

               
Alignm identity:
               
169
               

               
Alignm E-value:
               
5e-30
               

               
Alignm gaps (pig, cow):
               
112, 15
               

               
Conread position:
               
316-557
               

               
Cow position:
               
chr3:71423606-71423383 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
244
               

               
Alignm identity:
               
178
               

               
Alignm E-value:
               
5e-29
               

               
Alignm gaps (pig, cow):
               
111, 16
               

               
Conread position:
               
316-559
               

               
Cow position:
               
chr3:57274006-57274247 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
249
               

               
Alignm identity:
               
187
               

               
Alignm E-value:
               
5e-40
               

               
Alignm gaps (pig, cow):
               
90, 16
               

               
Conread position:
               
316-562
               

               
Cow position:
               
chr3:39969917-39969674 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
251
               

               
Alignm identity:
               
181
               

               
Alignm E-value:
               
2e-33
               

               
Alignm gaps (pig, cow):
               
78, 10
               

               
Conread position:
               
316-563
               

               
Cow position:
               
chr3:56949143-56948898 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
253
               

               
Alignm identity:
               
186
               

               
Alignm E-value:
               
1e-37
               

               
Alignm gaps (pig, cow):
               
112, 16
               

               
Conread position:
               
316-570
               

               
Cow position:
               
chr3:59588580-59588843 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
266
               

               
Alignm identity:
               
181
               

               
Alignm E-value:
               
1e-26
               

               
Alignm gaps (pig, cow):
               
14, 47
               

               
Conread position:
               
317-458
               

               
Cow position:
               
chr3:49650334-49650476 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
144
               

               
Alignm identity:
               
109
               

               
Alignm E-value:
               
2e-23
               

               
Alignm gaps (pig, cow):
               
109, 15
               

               
Conread position:
               
317-480
               

               
Cow position:
               
chr3:70401839-70402006 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
169
               

               
Alignm identity:
               
124
               

               
Alignm E-value:
               
7e-23
               

               
Alignm gaps (pig, cow):
               
8, 81
               

               
Conread position:
               
317-480
               

               
Cow position:
               
chr3:74900694-74900533 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
164
               

               
Alignm identity:
               
126
               

               
Alignm E-value:
               
2e-30
               

               
Alignm gaps (pig, cow):
               
15, 0
               

               
Conread position:
               
317-509
               

               
Cow position:
               
chr3:15751766-15751576 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
195
               

               
Alignm identity:
               
147
               

               
Alignm E-value:
               
6e-32
               

               
Alignm gaps (pig, cow):
               
109, 15
               

               
Conread position:
               
317-522
               

               
Cow position:
               
chr3:20129881-20130088 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
210
               

               
Alignm identity:
               
143
               

               
Alignm E-value:
               
6e-22
               

               
Alignm gaps (pig, cow):
               
26, 14
               

               
Conread position:
               
317-525
               

               
Cow position:
               
chr3:62864015-62864232 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
219
               

               
Alignm identity:
               
158
               

               
Alignm E-value:
               
1e-27
               

               
Alignm gaps (pig, cow):
               
32, 15
               

               
Conread position:
               
317-530
               

               
Cow position:
               
chr3:59299518-59299732 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
220
               

               
Alignm identity:
               
157
               

               
Alignm E-value:
               
3e-26
               

               
Alignm gaps (pig, cow):
               
15, 133
               

               
Conread position:
               
317-530
               

               
Cow position:
               
chr3:75570506-75570287 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
222
               

               
Alignm identity:
               
154
               

               
Alignm E-value:
               
8e-24
               

               
Alignm gaps (pig, cow):
               
133, 15
               

               
Conread position:
               
317-532
               

               
Cow position:
               
chr3:2637873-2638094 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
224
               

               
Alignm identity:
               
169
               

               
Alignm E-value:
               
3e-37
               

               
Alignm gaps (pig, cow):
               
105, 9
               

               
Conread position:
               
317-532
               

               
Cow position:
               
chr3:15950967-15950756 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
219
               

               
Alignm identity:
               
158
               

               
Alignm E-value:
               
4e-28
               

               
Alignm gaps (pig, cow):
               
105, 15
               

               
Conread position:
               
317-532
               

               
Cow position:
               
chr3:17134280-17134492 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
220
               

               
Alignm identity:
               
172
               

               
Alignm E-value:
               
4.99997e-41
               

               
Alignm gaps (pig, cow):
               
63, 15
               

               
Conread position:
               
317-532
               

               
Cow position:
               
chr3:29334472-29334249 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
224
               

               
Alignm identity:
               
168
               

               
Alignm E-value:
               
1e-37
               

               
Alignm gaps (pig, cow):
               
6, 0
               

               
Conread position:
               
317-532
               

               
Cow position:
               
chr3:31419638-31419856 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
221
               

               
Alignm identity:
               
151
               

               
Alignm E-value:
               
8e-24
               

               
Alignm gaps (pig, cow):
               
26, 14
               

               
Conread position:
               
317-532
               

               
Cow position:
               
chr3:58540584-58540356 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
230
               

               
Alignm identity:
               
158
               

               
Alignm E-value:
               
6e-22
               

               
Alignm gaps (pig, cow):
               
51, 90
               

               
Conread position:
               
317-532
               

               
Cow position:
               
chr3:59000806-59000602 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
218
               

               
Alignm identity:
               
170
               

               
Alignm E-value:
               
1e-38
               

               
Alignm gaps (pig, cow):
               
109, 15
               

               
Conread position:
               
317-532
               

               
Cow position:
               
chr3:60933363-60933579 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
219
               

               
Alignm identity:
               
159
               

               
Alignm E-value:
               
2e-33
               

               
Alignm gaps (pig, cow):
               
26, 14
               

               
Conread position:
               
317-533
               

               
Cow position:
               
chr3:72745617-72745393 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
226
               

               
Alignm identity:
               
167
               

               
Alignm E-value:
               
3e-35
               

               
Alignm gaps (pig, cow):
               
109, 17
               

               
Conread position:
               
317-547
               

               
Cow position:
               
chr3:39912748-39912511 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
242
               

               
Alignm identity:
               
173
               

               
Alignm E-value:
               
1e-28
               

               
Alignm gaps (pig, cow):
               
9, 127
               

               
Conread position:
               
317-547
               

               
Cow position:
               
chr3:79272627-79272400 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
233
               

               
Alignm identity:
               
170
               

               
Alignm E-value:
               
9e-36
               

               
Alignm gaps (pig, cow):
               
111, 9
               

               
Conread position:
               
317-550
               

               
Cow position:
               
chr3:29946333-29946570 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
241
               

               
Alignm identity:
               
177
               

               
Alignm E-value:
               
1e-36
               

               
Alignm gaps (pig, cow):
               
108, 15
               

               
Conread position:
               
317-551
               

               
Cow position:
               
chr3:16333743-16333983 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
243
               

               
Alignm identity:
               
181
               

               
Alignm E-value:
               
1e-39
               

               
Alignm gaps (pig, cow):
               
111, 15
               

               
Conread position:
               
317-552
               

               
Cow position:
               
chr3:3889624-3889396 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
241
               

               
Alignm identity:
               
180
               

               
Alignm E-value:
               
3e-34
               

               
Alignm gaps (pig, cow):
               
9, 30
               

               
Conread position:
               
317-553
               

               
Cow position:
               
chr3:210265-210505 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
242
               

               
Alignm identity:
               
187
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
111, 15
               

               
Conread position:
               
317-553
               

               
Cow position:
               
chr3:22887983-22887743 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
243
               

               
Alignm identity:
               
165
               

               
Alignm E-value:
               
1e-25
               

               
Alignm gaps (pig, cow):
               
26, 14
               

               
Conread position:
               
317-553
               

               
Cow position:
               
chr3:36160247-36160019 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
240
               

               
Alignm identity:
               
173
               

               
Alignm E-value:
               
6e-32
               

               
Alignm gaps (pig, cow):
               
26, 14
               

               
Conread position:
               
317-553
               

               
Cow position:
               
chr3:46792331-46792566 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
240
               

               
Alignm identity:
               
183
               

               
Alignm E-value:
               
8.40779e-45
               

               
Alignm gaps (pig, cow):
               
111, 15
               

               
Conread position:
               
317-555
               

               
Cow position:
               
chr3:26505641-26505411 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
243
               

               
Alignm identity:
               
166
               

               
Alignm E-value:
               
6e-22
               

               
Alignm gaps (pig, cow):
               
26, 14
               

               
Conread position:
               
317-555
               

               
Cow position:
               
chr3:48810699-48810454 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
248
               

               
Alignm identity:
               
182
               

               
Alignm E-value:
               
1e-36
               

               
Alignm gaps (pig, cow):
               
92, 15
               

               
Conread position:
               
317-555
               

               
Cow position:
               
chr3:58960637-58960410 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
239
               

               
Alignm identity:
               
161
               

               
Alignm E-value:
               
6e-21
               

               
Alignm gaps (pig, cow):
               
9, 0
               

               
Conread position:
               
317-556
               

               
Cow position:
               
chr3:15672208-15671962 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
249
               

               
Alignm identity:
               
171
               

               
Alignm E-value:
               
3e-26
               

               
Alignm gaps (pig, cow):
               
26, 14
               

               
Conread position:
               
317-556
               

               
Cow position:
               
chr3:41873847-41874092 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
248
               

               
Alignm identity:
               
171
               

               
Alignm E-value:
               
4e-28
               

               
Alignm gaps (pig, cow):
               
26, 14
               

               
Conread position:
               
317-556
               

               
Cow position:
               
chr3:55177800-55177566 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
242
               

               
Alignm identity:
               
171
               

               
Alignm E-value:
               
6e-32
               

               
Alignm gaps (pig, cow):
               
110, 18
               

               
Conread position:
               
317-558
               

               
Cow position:
               
chr3:70334020-70333782 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
244
               

               
Alignm identity:
               
188
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
145, 114
               

               
Conread position:
               
317-561
               

               
Cow position:
               
chr3:25477752-25477980 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
245
               

               
Alignm identity:
               
177
               

               
Alignm E-value:
               
6e-31
               

               
Alignm gaps (pig, cow):
               
15, 0
               

               
Conread position:
               
317-562
               

               
Cow position:
               
chr3:41129657-41129904 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
252
               

               
Alignm identity:
               
176
               

               
Alignm E-value:
               
2e-29
               

               
Alignm gaps (pig, cow):
               
26, 14
               

               
Conread position:
               
317-562
               

               
Cow position:
               
chr3:68708062-68707828 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
249
               

               
Alignm identity:
               
175
               

               
Alignm E-value:
               
1e-27
               

               
Alignm gaps (pig, cow):
               
229, 11
               

               
Conread position:
               
317-562
               

               
Cow position:
               
chr3:69144640-69144885 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
250
               

               
Alignm identity:
               
182
               

               
Alignm E-value:
               
4e-38
               

               
Alignm gaps (pig, cow):
               
105, 14
               

               
Conread position:
               
317-563
               

               
Cow position:
               
chr3:31056067-31055822 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
251
               

               
Alignm identity:
               
171
               

               
Alignm E-value:
               
1e-26
               

               
Alignm gaps (pig, cow):
               
114, 15
               

               
Conread position:
               
317-565
               

               
Cow position:
               
chr3:1830626-1830383 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
253
               

               
Alignm identity:
               
185
               

               
Alignm E-value:
               
1e-36
               

               
Alignm gaps (pig, cow):
               
109, 15
               

               
Conread position:
               
317-565
               

               
Cow position:
               
chr3:31225382-31225622 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
253
               

               
Alignm identity:
               
179
               

               
Alignm E-value:
               
4e-28
               

               
Alignm gaps (pig, cow):
               
111, 15
               

               
Conread position:
               
317-565
               

               
Cow position:
               
chr3:48468119-48468368 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
254
               

               
Alignm identity:
               
189
               

               
Alignm E-value:
               
1.99965e-42
               

               
Alignm gaps (pig, cow):
               
26, 14
               

               
Conread position:
               
317-565
               

               
Cow position:
               
chr3:69785679-69785420 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
263
               

               
Alignm identity:
               
180
               

               
Alignm E-value:
               
7e-23
               

               
Alignm gaps (pig, cow):
               
59, 17
               

               
Conread position:
               
317-565
               

               
Cow position:
               
chr3:79902442-79902689 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
253
               

               
Alignm identity:
               
176
               

               
Alignm E-value:
               
2e-29
               

               
Alignm gaps (pig, cow):
               
26, 14
               

               
Conread position:
               
317-572
               

               
Cow position:
               
chr3:79824974-79824720 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
259
               

               
Alignm identity:
               
186
               

               
Alignm E-value:
               
4e-38
               

               
Alignm gaps (pig, cow):
               
110, 15
               

               
Conread position:
               
317-572
               

               
Cow position:
               
chr3:81480602-81480857 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
261
               

               
Alignm identity:
               
176
               

               
Alignm E-value:
               
3e-25
               

               
Alignm gaps (pig, cow):
               
26, 14
               

               
Conread position:
               
317-573
               

               
Cow position:
               
chr3:35056032-35055774 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
263
               

               
Alignm identity:
               
193
               

               
Alignm E-value:
               
1e-39
               

               
Alignm gaps (pig, cow):
               
32, 15
               

               
Conread position:
               
317-573
               

               
Cow position:
               
chr3:74088234-74087974 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
264
               

               
Alignm identity:
               
178
               

               
Alignm E-value:
               
1e-25
               

               
Alignm gaps (pig, cow):
               
5, 15
               

               
Conread position:
               
317-576
               

               
Cow position:
               
chr3:5707267-5707005 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
265
               

               
Alignm identity:
               
182
               

               
Alignm E-value:
               
2e-32
               

               
Alignm gaps (pig, cow):
               
26, 14
               

               
Conread position:
               
317-576
               

               
Cow position:
               
chr3:30026313-30026579 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
269
               

               
Alignm identity:
               
185
               

               
Alignm E-value:
               
5e-30
               

               
Alignm gaps (pig, cow):
               
28, 14
               

               
Conread position:
               
317-581
               

               
Cow position:
               
chr3:55434279-55434540 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
270
               

               
Alignm identity:
               
183
               

               
Alignm E-value:
               
3e-26
               

               
Alignm gaps (pig, cow):
               
117, 14
               

               
Conread position:
               
317-582
               

               
Cow position:
               
chr3:42671474-42671742 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
272
               

               
Alignm identity:
               
180
               

               
Alignm E-value:
               
9e-25
               

               
Alignm gaps (pig, cow):
               
26, 15
               

               
Conread position:
               
317-584
               

               
Cow position:
               
chr3:2025143-2025416 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
277
               

               
Alignm identity:
               
203
               

               
Alignm E-value:
               
6.00036e-42
               

               
Alignm gaps (pig, cow):
               
51, 9
               

               
Conread position:
               
318-460
               

               
Cow position:
               
chr3:42423379-42423238 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
145
               

               
Alignm identity:
               
110
               

               
Alignm E-value:
               
2e-22
               

               
Alignm gaps (pig, cow):
               
108, 14
               

               
Conread position:
               
318-474
               

               
Cow position:
               
chr3:80581609-80581759 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
159
               

               
Alignm identity:
               
119
               

               
Alignm E-value:
               
2e-21
               

               
Alignm gaps (pig, cow):
               
108, 17
               

               
Conread position:
               
318-532
               

               
Cow position:
               
chr3:22889070-22888853 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
220
               

               
Alignm identity:
               
166
               

               
Alignm E-value:
               
1e-38
               

               
Alignm gaps (pig, cow):
               
110, 14
               

               
Conread position:
               
318-541
               

               
Cow position:
               
chr3:23876944-23877169 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
232
               

               
Alignm identity:
               
166
               

               
Alignm E-value:
               
1e-27
               

               
Alignm gaps (pig, cow):
               
56, 14
               

               
Conread position:
               
318-547
               

               
Cow position:
               
chr3:19585811-19586040 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
232
               

               
Alignm identity:
               
154
               

               
Alignm E-value:
               
7e-23
               

               
Alignm gaps (pig, cow):
               
104, 17
               

               
Conread position:
               
318-551
               

               
Cow position:
               
chr3:52487562-52487808 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
251
               

               
Alignm identity:
               
184
               

               
Alignm E-value:
               
2e-31
               

               
Alignm gaps (pig, cow):
               
28, 13
               

               
Conread position:
               
318-552
               

               
Cow position:
               
chr3:17456321-17456080 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
245
               

               
Alignm identity:
               
179
               

               
Alignm E-value:
               
8e-35
               

               
Alignm gaps (pig, cow):
               
107, 17
               

               
Conread position:
               
318-553
               

               
Cow position:
               
chr3:24468434-24468196 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
246
               

               
Alignm identity:
               
196
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
118, 14
               

               
Conread position:
               
318-560
               

               
Cow position:
               
chr3:11281713-11281960 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
249
               

               
Alignm identity:
               
190
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
113, 14
               

               
Conread position:
               
318-562
               

               
Cow position:
               
chr3:20841926-20841688 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
248
               

               
Alignm identity:
               
193
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
113, 14
               

               
Conread position:
               
318-580
               

               
Cow position:
               
chr3:31298216-31297949 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
271
               

               
Alignm identity:
               
186
               

               
Alignm E-value:
               
5e-30
               

               
Alignm gaps (pig, cow):
               
28, 13
               

               
Conread position:
               
319-505
               

               
Cow position:
               
chr3:73708995-73709181 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
189
               

               
Alignm identity:
               
144
               

               
Alignm E-value:
               
8e-34
               

               
Alignm gaps (pig, cow):
               
107, 13
               

               
Conread position:
               
319-529
               

               
Cow position:
               
chr3:19711391-19711178 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
216
               

               
Alignm identity:
               
167
               

               
Alignm E-value:
               
1.99993e-41
               

               
Alignm gaps (pig, cow):
               
107, 90
               

               
Conread position:
               
319-532
               

               
Cow position:
               
chr3:3584295-3584501 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
215
               

               
Alignm identity:
               
154
               

               
Alignm E-value:
               
4e-27
               

               
Alignm gaps (pig, cow):
               
70, 13
               

               
Conread position:
               
319-537
               

               
Cow position:
               
chr3:56704373-56704144 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
231
               

               
Alignm identity:
               
174
               

               
Alignm E-value:
               
3e-37
               

               
Alignm gaps (pig, cow):
               
107, 13
               

               
Conread position:
               
319-549
               

               
Cow position:
               
chr3:52652133-52651903 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
234
               

               
Alignm identity:
               
173
               

               
Alignm E-value:
               
4e-38
               

               
Alignm gaps (pig, cow):
               
76, 13
               

               
Conread position:
               
319-556
               

               
Cow position:
               
chr3:8349617-8349385 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
243
               

               
Alignm identity:
               
172
               

               
Alignm E-value:
               
1e-26
               

               
Alignm gaps (pig, cow):
               
55, 27
               

               
Conread position:
               
319-572
               

               
Cow position:
               
chr3:59474070-59474322 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
258
               

               
Alignm identity:
               
195
               

               
Alignm E-value:
               
1.4013e-45
               

               
Alignm gaps (pig, cow):
               
107, 13
               

               
Conread position:
               
320-508
               

               
Cow position:
               
chr3:6689949-6690140 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
193
               

               
Alignm identity:
               
142
               

               
Alignm E-value:
               
2e-29
               

               
Alignm gaps (pig, cow):
               
106, 15
               

               
Conread position:
               
321-532
               

               
Cow position:
               
chr3:68303266-68303479 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
217
               

               
Alignm identity:
               
175
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
115, 11
               

               
Conread position:
               
321-554
               

               
Cow position:
               
chr3:23203281-23203047 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
237
               

               
Alignm identity:
               
182
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
102, 11
               

               
Conread position:
               
321-556
               

               
Cow position:
               
chr3:71497188-71496944 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
246
               

               
Alignm identity:
               
188
               

               
Alignm E-value:
               
2.8026e-45
               

               
Alignm gaps (pig, cow):
               
107, 11
               

               
Conread position:
               
321-562
               

               
Cow position:
               
chr3:14770932-14770697 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
245
               

               
Alignm identity:
               
172
               

               
Alignm E-value:
               
4e-28
               

               
Alignm gaps (pig, cow):
               
22, 10
               

               
Conread position:
               
322-480
               

               
Cow position:
               
chr3:10103992-10104150 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
161
               

               
Alignm identity:
               
121
               

               
Alignm E-value:
               
3e-25
               

               
Alignm gaps (pig, cow):
               
104, 12
               

               
Conread position:
               
322-480
               

               
Cow position:
               
chr3:52863234-52863071 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
164
               

               
Alignm identity:
               
126
               

               
Alignm E-value:
               
1e-28
               

               
Alignm gaps (pig, cow):
               
104, 0
               

               
Conread position:
               
322-508
               

               
Cow position:
               
chr3:21641939-21642133 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
197
               

               
Alignm identity:
               
145
               

               
Alignm E-value:
               
1e-26
               

               
Alignm gaps (pig, cow):
               
104, 10
               

               
Conread position:
               
322-517
               

               
Cow position:
               
chr3:44101919-44102113 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
199
               

               
Alignm identity:
               
155
               

               
Alignm E-value:
               
3e-37
               

               
Alignm gaps (pig, cow):
               
62, 13
               

               
Conread position:
               
322-517
               

               
Cow position:
               
chr3:72391033-72391234 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
203
               

               
Alignm identity:
               
158
               

               
Alignm E-value:
               
1e-38
               

               
Alignm gaps (pig, cow):
               
108, 10
               

               
Conread position:
               
322-521
               

               
Cow position:
               
chr3:46266152-46266353 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
204
               

               
Alignm identity:
               
147
               

               
Alignm E-value:
               
1e-28
               

               
Alignm gaps (pig, cow):
               
128, 13
               

               
Conread position:
               
322-521
               

               
Cow position:
               
chr3:65413327-65413124 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
205
               

               
Alignm identity:
               
153
               

               
Alignm E-value:
               
7e-33
               

               
Alignm gaps (pig, cow):
               
104, 10
               

               
Conread position:
               
322-532
               

               
Cow position:
               
chr3:3275547-3275756 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
216
               

               
Alignm identity:
               
153
               

               
Alignm E-value:
               
3e-25
               

               
Alignm gaps (pig, cow):
               
44, 12
               

               
Conread position:
               
322-532
               

               
Cow position:
               
chr3:23408405-23408203 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
213
               

               
Alignm identity:
               
156
               

               
Alignm E-value:
               
4e-28
               

               
Alignm gaps (pig, cow):
               
100, 6
               

               
Conread position:
               
322-541
               

               
Cow position:
               
chr3:16107406-16107200 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
224
               

               
Alignm identity:
               
164
               

               
Alignm E-value:
               
3e-26
               

               
Alignm gaps (pig, cow):
               
100, 10
               

               
Conread position:
               
322-543
               

               
Cow position:
               
chr3:14546953-14547171 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
223
               

               
Alignm identity:
               
173
               

               
Alignm E-value:
               
8.40779e-45
               

               
Alignm gaps (pig, cow):
               
115, 10
               

               
Conread position:
               
322-547
               

               
Cow position:
               
chr3:23132218-23131992 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
228
               

               
Alignm identity:
               
167
               

               
Alignm E-value:
               
1e-38
               

               
Alignm gaps (pig, cow):
               
104, 13
               

               
Conread position:
               
322-553
               

               
Cow position:
               
chr3:23804467-23804684 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
234
               

               
Alignm identity:
               
169
               

               
Alignm E-value:
               
5e-29
               

               
Alignm gaps (pig, cow):
               
106, 10
               

               
Conread position:
               
322-554
               

               
Cow position:
               
chr3:17235262-17235021 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
247
               

               
Alignm identity:
               
179
               

               
Alignm E-value:
               
2e-31
               

               
Alignm gaps (pig, cow):
               
49, 10
               

               
Conread position:
               
322-555
               

               
Cow position:
               
chr3:9026133-9025896 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
242
               

               
Alignm identity:
               
188
               

               
Alignm E-value:
               
1.96182e-44
               

               
Alignm gaps (pig, cow):
               
107, 12
               

               
Conread position:
               
322-555
               

               
Cow position:
               
chr3:40213082-40212852 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
236
               

               
Alignm identity:
               
183
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
106, 10
               

               
Conread position:
               
322-556
               

               
Cow position:
               
chr3:1011437-1011677 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
243
               

               
Alignm identity:
               
186
               

               
Alignm E-value:
               
1.96182e-44
               

               
Alignm gaps (pig, cow):
               
77, 13
               

               
Conread position:
               
322-556
               

               
Cow position:
               
chr3:3032360-3032594 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
238
               

               
Alignm identity:
               
177
               

               
Alignm E-value:
               
4.99997e-41
               

               
Alignm gaps (pig, cow):
               
106, 10
               

               
Conread position:
               
322-556
               

               
Cow position:
               
chr3:21015007-21014769 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
243
               

               
Alignm identity:
               
179
               

               
Alignm E-value:
               
3e-36
               

               
Alignm gaps (pig, cow):
               
79, 10
               

               
Conread position:
               
322-556
               

               
Cow position:
               
chr3:48459378-48459144 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
237
               

               
Alignm identity:
               
163
               

               
Alignm E-value:
               
5e-29
               

               
Alignm gaps (pig, cow):
               
104, 10
               

               
Conread position:
               
322-556
               

               
Cow position:
               
chr3:75853374-75853145 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
241
               

               
Alignm identity:
               
176
               

               
Alignm E-value:
               
6e-32
               

               
Alignm gaps (pig, cow):
               
110, 10
               

               
Conread position:
               
322-565
               

               
Cow position:
               
chr3:79271761-79271518 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
249
               

               
Alignm identity:
               
187
               

               
Alignm E-value:
               
1.99965e-42
               

               
Alignm gaps (pig, cow):
               
30, 7
               

               
Conread position:
               
322-577
               

               
Cow position:
               
chr3:55712391-55712634 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
258
               

               
Alignm identity:
               
191
               

               
Alignm E-value:
               
4e-38
               

               
Alignm gaps (pig, cow):
               
106, 10
               

               
Conread position:
               
322-578
               

               
Cow position:
               
chr3:27976573-27976318 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
262
               

               
Alignm identity:
               
205
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
104, 10
               

               
Conread position:
               
322-581
               

               
Cow position:
               
chr3:31554900-31555144 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
262
               

               
Alignm identity:
               
187
               

               
Alignm E-value:
               
2e-31
               

               
Alignm gaps (pig, cow):
               
167, 96
               

               
Conread position:
               
323-530
               

               
Cow position:
               
chr3:54373908-54373698 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
212
               

               
Alignm identity:
               
158
               

               
Alignm E-value:
               
3e-36
               

               
Alignm gaps (pig, cow):
               
105, 9
               

               
Conread position:
               
323-544
               

               
Cow position:
               
chr3:38248603-38248835 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
235
               

               
Alignm identity:
               
169
               

               
Alignm E-value:
               
1e-26
               

               
Alignm gaps (pig, cow):
               
48, 19
               

               
Conread position:
               
323-547
               

               
Cow position:
               
chr3:4268630-4268398 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
234
               

               
Alignm identity:
               
171
               

               
Alignm E-value:
               
3e-34
               

               
Alignm gaps (pig, cow):
               
26, 5
               

               
Conread position:
               
323-547
               

               
Cow position:
               
chr3:12090623-12090853 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
235
               

               
Alignm identity:
               
179
               

               
Alignm E-value:
               
4e-39
               

               
Alignm gaps (pig, cow):
               
7, 71
               

               
Conread position:
               
323-548
               

               
Cow position:
               
chr3:38035638-38035411 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
229
               

               
Alignm identity:
               
166
               

               
Alignm E-value:
               
3e-36
               

               
Alignm gaps (pig, cow):
               
131, 9
               

               
Conread position:
               
323-550
               

               
Cow position:
               
chr3:18686858-18687080 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
230
               

               
Alignm identity:
               
173
               

               
Alignm E-value:
               
4e-39
               

               
Alignm gaps (pig, cow):
               
103, 9
               

               
Conread position:
               
323-550
               

               
Cow position:
               
chr3:63844883-63845119 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
238
               

               
Alignm identity:
               
166
               

               
Alignm E-value:
               
1e-27
               

               
Alignm gaps (pig, cow):
               
32, 9
               

               
Conread position:
               
323-555
               

               
Cow position:
               
chr3:5040355-5040119 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
241
               

               
Alignm identity:
               
181
               

               
Alignm E-value:
               
4e-38
               

               
Alignm gaps (pig, cow):
               
103, 9
               

               
Conread position:
               
323-555
               

               
Cow position:
               
chr3:78443615-78443382 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
238
               

               
Alignm identity:
               
169
               

               
Alignm E-value:
               
2e-30
               

               
Alignm gaps (pig, cow):
               
105, 9
               

               
Conread position:
               
323-556
               

               
Cow position:
               
chr3:58317998-58317758 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
241
               

               
Alignm identity:
               
175
               

               
Alignm E-value:
               
3e-37
               

               
Alignm gaps (pig, cow):
               
12, 0
               

               
Conread position:
               
323-557
               

               
Cow position:
               
chr3:9663222-9662977 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
246
               

               
Alignm identity:
               
193
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
7, 0
               

               
Conread position:
               
323-558
               

               
Cow position:
               
chr3:7763608-7763847 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
242
               

               
Alignm identity:
               
173
               

               
Alignm E-value:
               
2e-33
               

               
Alignm gaps (pig, cow):
               
109, 12
               

               
Conread position:
               
323-559
               

               
Cow position:
               
chr3:46006066-46005826 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
246
               

               
Alignm identity:
               
176
               

               
Alignm E-value:
               
2e-30
               

               
Alignm gaps (pig, cow):
               
103, 17
               

               
Conread position:
               
323-562
               

               
Cow position:
               
chr3:71238106-71238340 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
242
               

               
Alignm identity:
               
183
               

               
Alignm E-value:
               
6.00036e-42
               

               
Alignm gaps (pig, cow):
               
102, 9
               

               
Conread position:
               
323-565
               

               
Cow position:
               
chr3:71478547-71478791 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
250
               

               
Alignm identity:
               
175
               

               
Alignm E-value:
               
1e-28
               

               
Alignm gaps (pig, cow):
               
52, 9
               

               
Conread position:
               
323-566
               

               
Cow position:
               
chr3:59649209-59649454 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
248
               

               
Alignm identity:
               
183
               

               
Alignm E-value:
               
1.99993e-41
               

               
Alignm gaps (pig, cow):
               
58, 9
               

               
Conread position:
               
323-567
               

               
Cow position:
               
chr3:37647332-37647588 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
258
               

               
Alignm identity:
               
175
               

               
Alignm E-value:
               
3e-24
               

               
Alignm gaps (pig, cow):
               
28, 5
               

               
Conread position:
               
324-494
               

               
Cow position:
               
chr3:79645483-79645304 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
181
               

               
Alignm identity:
               
131
               

               
Alignm E-value:
               
6e-21
               

               
Alignm gaps (pig, cow):
               
94, 11
               

               
Conread position:
               
324-509
               

               
Cow position:
               
chr3:77271324-77271140 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
188
               

               
Alignm identity:
               
134
               

               
Alignm E-value:
               
8e-24
               

               
Alignm gaps (pig, cow):
               
102, 11
               

               
Conread position:
               
324-517
               

               
Cow position:
               
chr3:55010209-55010025 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
196
               

               
Alignm identity:
               
143
               

               
Alignm E-value:
               
8e-24
               

               
Alignm gaps (pig, cow):
               
102, 35
               

               
Conread position:
               
324-525
               

               
Cow position:
               
chr3:74787384-74787580 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
205
               

               
Alignm identity:
               
153
               

               
Alignm E-value:
               
2e-29
               

               
Alignm gaps (pig, cow):
               
102, 8
               

               
Conread position:
               
324-528
               

               
Cow position:
               
chr3:84250590-84250392 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
209
               

               
Alignm identity:
               
159
               

               
Alignm E-value:
               
2e-33
               

               
Alignm gaps (pig, cow):
               
37, 62
               

               
Conread position:
               
324-530
               

               
Cow position:
               
chr3:33252937-33252733 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
209
               

               
Alignm identity:
               
161
               

               
Alignm E-value:
               
1e-39
               

               
Alignm gaps (pig, cow):
               
104, 142
               

               
Conread position:
               
324-532
               

               
Cow position:
               
chr3:42796565-42796357 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
213
               

               
Alignm identity:
               
165
               

               
Alignm E-value:
               
1e-38
               

               
Alignm gaps (pig, cow):
               
15, 36
               

               
Conread position:
               
324-547
               

               
Cow position:
               
chr3:53318354-53318586 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
234
               

               
Alignm identity:
               
178
               

               
Alignm E-value:
               
4.99997e-41
               

               
Alignm gaps (pig, cow):
               
113, 11
               

               
Conread position:
               
324-554
               

               
Cow position:
               
chr3:68586976-68587202 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
234
               

               
Alignm identity:
               
181
               

               
Alignm E-value:
               
7.00649e-43
               

               
Alignm gaps (pig, cow):
               
99, 8
               

               
Conread position:
               
324-554
               

               
Cow position:
               
chr3:79884530-79884297 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
238
               

               
Alignm identity:
               
177
               

               
Alignm E-value:
               
3e-37
               

               
Alignm gaps (pig, cow):
               
112, 36
               

               
Conread position:
               
324-557
               

               
Cow position:
               
chr3:76024460-76024689 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
237
               

               
Alignm identity:
               
168
               

               
Alignm E-value:
               
2e-29
               

               
Alignm gaps (pig, cow):
               
56, 8
               

               
Conread position:
               
324-561
               

               
Cow position:
               
chr3:77365337-77365098 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
242
               

               
Alignm identity:
               
166
               

               
Alignm E-value:
               
1e-27
               

               
Alignm gaps (pig, cow):
               
102, 8
               

               
Conread position:
               
325-554
               

               
Cow position:
               
chr3:45823070-45822836 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
235
               

               
Alignm identity:
               
168
               

               
Alignm E-value:
               
3e-34
               

               
Alignm gaps (pig, cow):
               
18, 0
               

               
Conread position:
               
325-554
               

               
Cow position:
               
chr3:78067205-78066970 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
237
               

               
Alignm identity:
               
161
               

               
Alignm E-value:
               
9e-25
               

               
Alignm gaps (pig, cow):
               
17, 225
               

               
Conread position:
               
325-556
               

               
Cow position:
               
chr3:47316426-47316192 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
237
               

               
Alignm identity:
               
164
               

               
Alignm E-value:
               
4e-27
               

               
Alignm gaps (pig, cow):
               
22, 50
               

               
Conread position:
               
326-557
               

               
Cow position:
               
chr3:26783549-26783321 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
238
               

               
Alignm identity:
               
168
               

               
Alignm E-value:
               
3e-25
               

               
Alignm gaps (pig, cow):
               
132, 14
               

               
Conread position:
               
328-548
               

               
Cow position:
               
chr3:80709912-80709687 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
227
               

               
Alignm identity:
               
163
               

               
Alignm E-value:
               
6e-32
               

               
Alignm gaps (pig, cow):
               
15, 210
               

               
Conread position:
               
328-565
               

               
Cow position:
               
chr3:72027590-72027840 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
252
               

               
Alignm identity:
               
193
               

               
Alignm E-value:
               
2.00386e-43
               

               
Alignm gaps (pig, cow):
               
35, 74
               

               
Conread position:
               
329-480
               

               
Cow position:
               
chr3:57877523-57877676 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
154
               

               
Alignm identity:
               
119
               

               
Alignm E-value:
               
5e-29
               

               
Alignm gaps (pig, cow):
               
103, 0
               

               
Conread position:
               
329-499
               

               
Cow position:
               
chr3:28898266-28898091 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
176
               

               
Alignm identity:
               
139
               

               
Alignm E-value:
               
3e-35
               

               
Alignm gaps (pig, cow):
               
99, 0
               

               
Conread position:
               
329-516
               

               
Cow position:
               
chr3:83988490-83988682 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
194
               

               
Alignm identity:
               
145
               

               
Alignm E-value:
               
2e-31
               

               
Alignm gaps (pig, cow):
               
97, 80
               

               
Conread position:
               
329-529
               

               
Cow position:
               
chr3:948924-949129 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
207
               

               
Alignm identity:
               
142
               

               
Alignm E-value:
               
2e-21
               

               
Alignm gaps (pig, cow):
               
12, 167
               

               
Conread position:
               
329-532
               

               
Cow position:
               
chr3:23753457-23753645 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
206
               

               
Alignm identity:
               
155
               

               
Alignm E-value:
               
1e-26
               

               
Alignm gaps (pig, cow):
               
99, 28
               

               
Conread position:
               
329-532
               

               
Cow position:
               
chr3:46305423-46305623 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
211
               

               
Alignm identity:
               
152
               

               
Alignm E-value:
               
2e-22
               

               
Alignm gaps (pig, cow):
               
133, 26
               

               
Conread position:
               
329-532
               

               
Cow position:
               
chr3:75238414-75238621 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
208
               

               
Alignm identity:
               
173
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
97, 0
               

               
Conread position:
               
329-541
               

               
Cow position:
               
chr3:81087679-81087466 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
218
               

               
Alignm identity:
               
160
               

               
Alignm E-value:
               
7e-33
               

               
Alignm gaps (pig, cow):
               
97, 55
               

               
Conread position:
               
329-551
               

               
Cow position:
               
chr3:76268018-76267794 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
225
               

               
Alignm identity:
               
175
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
99, 0
               

               
Conread position:
               
329-554
               

               
Cow position:
               
chr3:15973523-15973754 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
232
               

               
Alignm identity:
               
190
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
99, 0
               

               
Conread position:
               
329-554
               

               
Cow position:
               
chr3:55819715-55819937 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
231
               

               
Alignm identity:
               
177
               

               
Alignm E-value:
               
2e-40
               

               
Alignm gaps (pig, cow):
               
198, 92
               

               
Conread position:
               
329-557
               

               
Cow position:
               
chr3:42434378-42434137 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
243
               

               
Alignm identity:
               
170
               

               
Alignm E-value:
               
1e-26
               

               
Alignm gaps (pig, cow):
               
28, 171
               

               
Conread position:
               
329-557
               

               
Cow position:
               
chr3:64280974-64280752 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
230
               

               
Alignm identity:
               
170
               

               
Alignm E-value:
               
1e-36
               

               
Alignm gaps (pig, cow):
               
40, 98
               

               
Conread position:
               
329-559
               

               
Cow position:
               
chr3:4071806-4071575 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
240
               

               
Alignm identity:
               
173
               

               
Alignm E-value:
               
2e-29
               

               
Alignm gaps (pig, cow):
               
94, 37
               

               
Conread position:
               
329-571
               

               
Cow position:
               
chr3:82366086-82366328 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
249
               

               
Alignm identity:
               
182
               

               
Alignm E-value:
               
3e-37
               

               
Alignm gaps (pig, cow):
               
90, 29
               

               
Conread position:
               
330-480
               

               
Cow position:
               
chr3:61278869-61279018 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
152
               

               
Alignm identity:
               
112
               

               
Alignm E-value:
               
2e-22
               

               
Alignm gaps (pig, cow):
               
99, 28
               

               
Conread position:
               
330-512
               

               
Cow position:
               
chr3:55124322-55124140 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
185
               

               
Alignm identity:
               
130
               

               
Alignm E-value:
               
2e-22
               

               
Alignm gaps (pig, cow):
               
114, 100
               

               
Conread position:
               
330-525
               

               
Cow position:
               
chr3:17305021-17304816 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
209
               

               
Alignm identity:
               
155
               

               
Alignm E-value:
               
1e-27
               

               
Alignm gaps (pig, cow):
               
69, 128
               

               
Conread position:
               
330-530
               

               
Cow position:
               
chr3:20997044-20996843 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
210
               

               
Alignm identity:
               
156
               

               
Alignm E-value:
               
1e-27
               

               
Alignm gaps (pig, cow):
               
74, 41
               

               
Conread position:
               
330-530
               

               
Cow position:
               
chr3:50615312-50615104 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
211
               

               
Alignm identity:
               
149
               

               
Alignm E-value:
               
2e-23
               

               
Alignm gaps (pig, cow):
               
37, 71
               

               
Conread position:
               
330-532
               

               
Cow position:
               
chr3:39996933-39996732 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
208
               

               
Alignm identity:
               
155
               

               
Alignm E-value:
               
6e-31
               

               
Alignm gaps (pig, cow):
               
49, 146
               

               
Conread position:
               
330-550
               

               
Cow position:
               
chr3:54905576-54905784 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
223
               

               
Alignm identity:
               
173
               

               
Alignm E-value:
               
3e-36
               

               
Alignm gaps (pig, cow):
               
96, 44
               

               
Conread position:
               
330-555
               

               
Cow position:
               
chr3:35624586-35624360 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
230
               

               
Alignm identity:
               
175
               

               
Alignm E-value:
               
6.00036e-42
               

               
Alignm gaps (pig, cow):
               
96, 10
               

               
Conread position:
               
330-556
               

               
Cow position:
               
chr3:77188396-77188625 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
230
               

               
Alignm identity:
               
163
               

               
Alignm E-value:
               
8e-34
               

               
Alignm gaps (pig, cow):
               
98, 0
               

               
Conread position:
               
330-559
               

               
Cow position:
               
chr3:25905091-25904851 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
241
               

               
Alignm identity:
               
167
               

               
Alignm E-value:
               
1e-27
               

               
Alignm gaps (pig, cow):
               
37, 0
               

               
Conread position:
               
330-561
               

               
Cow position:
               
chr3:28903965-28903724 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
244
               

               
Alignm identity:
               
168
               

               
Alignm E-value:
               
2e-22
               

               
Alignm gaps (pig, cow):
               
30, 35
               

               
Conread position:
               
330-576
               

               
Cow position:
               
chr3:10841770-10842027 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
258
               

               
Alignm identity:
               
184
               

               
Alignm E-value:
               
3e-35
               

               
Alignm gaps (pig, cow):
               
30, 0
               

               
Conread position:
               
331-523
               

               
Cow position:
               
chr3:33048435-33048240 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
196
               

               
Alignm identity:
               
144
               

               
Alignm E-value:
               
6e-32
               

               
Alignm gaps (pig, cow):
               
97, 0
               

               
Conread position:
               
331-531
               

               
Cow position:
               
chr3:17222183-17221973 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
211
               

               
Alignm identity:
               
152
               

               
Alignm E-value:
               
1e-27
               

               
Alignm gaps (pig, cow):
               
88, 0
               

               
Conread position:
               
331-531
               

               
Cow position:
               
chr3:53221971-53222172 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
205
               

               
Alignm identity:
               
147
               

               
Alignm E-value:
               
1e-26
               

               
Alignm gaps (pig, cow):
               
40, 117
               

               
Conread position:
               
331-542
               

               
Cow position:
               
chr3:15158990-15159205 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
218
               

               
Alignm identity:
               
150
               

               
Alignm E-value:
               
8e-24
               

               
Alignm gaps (pig, cow):
               
95, 192
               

               
Conread position:
               
331-543
               

               
Cow position:
               
chr3:8181992-8181772 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
226
               

               
Alignm identity:
               
166
               

               
Alignm E-value:
               
2e-29
               

               
Alignm gaps (pig, cow):
               
97, 75
               

               
Conread position:
               
331-547
               

               
Cow position:
               
chr3:83787393-83787618 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
226
               

               
Alignm identity:
               
158
               

               
Alignm E-value:
               
3e-26
               

               
Alignm gaps (pig, cow):
               
20, 0
               

               
Conread position:
               
331-552
               

               
Cow position:
               
chr3:3316856-3316627 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
231
               

               
Alignm identity:
               
159
               

               
Alignm E-value:
               
1e-25
               

               
Alignm gaps (pig, cow):
               
95, 66
               

               
Conread position:
               
331-553
               

               
Cow position:
               
chr3:5305757-5305990 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
234
               

               
Alignm identity:
               
166
               

               
Alignm E-value:
               
2e-30
               

               
Alignm gaps (pig, cow):
               
96, 0
               

               
Conread position:
               
331-553
               

               
Cow position:
               
chr3:21112685-21112455 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
234
               

               
Alignm identity:
               
166
               

               
Alignm E-value:
               
1e-27
               

               
Alignm gaps (pig, cow):
               
25, 101
               

               
Conread position:
               
331-557
               

               
Cow position:
               
chr3:84378520-84378284 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
237
               

               
Alignm identity:
               
163
               

               
Alignm E-value:
               
1e-25
               

               
Alignm gaps (pig, cow):
               
96, 0
               

               
Conread position:
               
331-558
               

               
Cow position:
               
chr3:31077770-31077533 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
239
               

               
Alignm identity:
               
162
               

               
Alignm E-value:
               
7e-23
               

               
Alignm gaps (pig, cow):
               
27, 82
               

               
Conread position:
               
331-571
               

               
Cow position:
               
chr3:84928062-84928306 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
246
               

               
Alignm identity:
               
176
               

               
Alignm E-value:
               
3e-36
               

               
Alignm gaps (pig, cow):
               
97, 220
               

               
Conread position:
               
332-532
               

               
Cow position:
               
chr3:84174260-84174465 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
206
               

               
Alignm identity:
               
155
               

               
Alignm E-value:
               
3e-36
               

               
Alignm gaps (pig, cow):
               
18, 0
               

               
Conread position:
               
332-547
               

               
Cow position:
               
chr3:39606062-39605837 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
226
               

               
Alignm identity:
               
162
               

               
Alignm E-value:
               
2e-30
               

               
Alignm gaps (pig, cow):
               
21, 0
               

               
Conread position:
               
332-550
               

               
Cow position:
               
chr3:41863584-41863801 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
222
               

               
Alignm identity:
               
168
               

               
Alignm E-value:
               
1e-38
               

               
Alignm gaps (pig, cow):
               
21, 134
               

               
Conread position:
               
332-555
               

               
Cow position:
               
chr3:58452008-58452228 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
226
               

               
Alignm identity:
               
168
               

               
Alignm E-value:
               
1e-37
               

               
Alignm gaps (pig, cow):
               
130, 48
               

               
Conread position:
               
332-555
               

               
Cow position:
               
chr3:75222462-75222688 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
228
               

               
Alignm identity:
               
153
               

               
Alignm E-value:
               
2e-23
               

               
Alignm gaps (pig, cow):
               
11, 215
               

               
Conread position:
               
332-556
               

               
Cow position:
               
chr3:73525279-73525045 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
235
               

               
Alignm identity:
               
169
               

               
Alignm E-value:
               
2e-32
               

               
Alignm gaps (pig, cow):
               
18, 0
               

               
Conread position:
               
332-570
               

               
Cow position:
               
chr3:6728370-6728124 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
249
               

               
Alignm identity:
               
183
               

               
Alignm E-value:
               
1e-37
               

               
Alignm gaps (pig, cow):
               
99, 221
               

               
Conread position:
               
333-553
               

               
Cow position:
               
chr3:55540974-55541202 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
229
               

               
Alignm identity:
               
159
               

               
Alignm E-value:
               
4e-27
               

               
Alignm gaps (pig, cow):
               
10, 0
               

               
Conread position:
               
333-556
               

               
Cow position:
               
chr3:68648126-68648367 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
242
               

               
Alignm identity:
               
177
               

               
Alignm E-value:
               
6e-32
               

               
Alignm gaps (pig, cow):
               
29, 0
               

               
Conread position:
               
333-563
               

               
Cow position:
               
chr3:7860293-7860059 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
236
               

               
Alignm identity:
               
162
               

               
Alignm E-value:
               
1e-27
               

               
Alignm gaps (pig, cow):
               
10, 215
               

               
Conread position:
               
333-575
               

               
Cow position:
               
chr3:51329271-51329028 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
248
               

               
Alignm identity:
               
171
               

               
Alignm E-value:
               
1e-28
               

               
Alignm gaps (pig, cow):
               
17, 55
               

               
Conread position:
               
334-555
               

               
Cow position:
               
chr3:74127541-74127317 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
232
               

               
Alignm identity:
               
169
               

               
Alignm E-value:
               
5e-29
               

               
Alignm gaps (pig, cow):
               
97, 46
               

               
Conread position:
               
334-556
               

               
Cow position:
               
chr3:22924414-22924195 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
226
               

               
Alignm identity:
               
161
               

               
Alignm E-value:
               
2e-29
               

               
Alignm gaps (pig, cow):
               
9, 131
               

               
Conread position:
               
334-565
               

               
Cow position:
               
chr3:84137853-84137619 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
235
               

               
Alignm identity:
               
169
               

               
Alignm E-value:
               
3e-37
               

               
Alignm gaps (pig, cow):
               
92, 0
               

               
Conread position:
               
335-532
               

               
Cow position:
               
chr3:19006104-19006304 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
201
               

               
Alignm identity:
               
145
               

               
Alignm E-value:
               
2e-30
               

               
Alignm gaps (pig, cow):
               
127, 0
               

               
Conread position:
               
335-532
               

               
Cow position:
               
chr3:70762157-70761962 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
200
               

               
Alignm identity:
               
140
               

               
Alignm E-value:
               
2e-23
               

               
Alignm gaps (pig, cow):
               
87, 45
               

               
Conread position:
               
335-554
               

               
Cow position:
               
chr3:7331160-7330950 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
221
               

               
Alignm identity:
               
152
               

               
Alignm E-value:
               
6e-22
               

               
Alignm gaps (pig, cow):
               
88, 52
               

               
Conread position:
               
335-555
               

               
Cow position:
               
chr3:71246988-71247203 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
222
               

               
Alignm identity:
               
152
               

               
Alignm E-value:
               
8e-24
               

               
Alignm gaps (pig, cow):
               
203, 56
               

               
Conread position:
               
335-557
               

               
Cow position:
               
chr3:26982021-26982239 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
225
               

               
Alignm identity:
               
159
               

               
Alignm E-value:
               
1e-28
               

               
Alignm gaps (pig, cow):
               
91, 111
               

               
Conread position:
               
335-565
               

               
Cow position:
               
chr3:83770694-83770927 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
235
               

               
Alignm identity:
               
170
               

               
Alignm E-value:
               
1e-36
               

               
Alignm gaps (pig, cow):
               
93, 208
               

               
Conread position:
               
335-570
               

               
Cow position:
               
chr3:57776764-57776995 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
238
               

               
Alignm identity:
               
159
               

               
Alignm E-value:
               
6e-22
               

               
Alignm gaps (pig, cow):
               
127, 77
               

               
Conread position:
               
336-532
               

               
Cow position:
               
chr3:72255456-72255257 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
200
               

               
Alignm identity:
               
149
               

               
Alignm E-value:
               
8e-35
               

               
Alignm gaps (pig, cow):
               
10, 0
               

               
Conread position:
               
336-557
               

               
Cow position:
               
chr3:8814149-8813913 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
237
               

               
Alignm identity:
               
184
               

               
Alignm E-value:
               
6.00036e-42
               

               
Alignm gaps (pig, cow):
               
95, 0
               

               
Conread position:
               
337-531
               

               
Cow position:
               
chr3:70756677-70756479 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
200
               

               
Alignm identity:
               
158
               

               
Alignm E-value:
               
4.99997e-41
               

               
Alignm gaps (pig, cow):
               
5, 18
               

               
Conread position:
               
337-540
               

               
Cow position:
               
chr3:74234151-74234355 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
207
               

               
Alignm identity:
               
147
               

               
Alignm E-value:
               
4e-28
               

               
Alignm gaps (pig, cow):
               
89, 128
               

               
Conread position:
               
337-549
               

               
Cow position:
               
chr3:82084783-82084999 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
219
               

               
Alignm identity:
               
155
               

               
Alignm E-value:
               
4e-28
               

               
Alignm gaps (pig, cow):
               
89, 42
               

               
Conread position:
               
337-557
               

               
Cow position:
               
chr3:19900619-19900842 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
227
               

               
Alignm identity:
               
164
               

               
Alignm E-value:
               
6e-32
               

               
Alignm gaps (pig, cow):
               
41, 84
               

               
Conread position:
               
337-585
               

               
Cow position:
               
chr3:80329278-80329540 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
263
               

               
Alignm identity:
               
174
               

               
Alignm E-value:
               
6e-21
               

               
Alignm gaps (pig, cow):
               
97, 0
               

               
Conread position:
               
338-543
               

               
Cow position:
               
chr3:17058580-17058375 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
208
               

               
Alignm identity:
               
155
               

               
Alignm E-value:
               
9e-36
               

               
Alignm gaps (pig, cow):
               
89, 144
               

               
Conread position:
               
338-555
               

               
Cow position:
               
chr3:54297516-54297296 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
223
               

               
Alignm identity:
               
153
               

               
Alignm E-value:
               
8e-24
               

               
Alignm gaps (pig, cow):
               
27, 66
               

               
Conread position:
               
340-509
               

               
Cow position:
               
chr3:15237723-15237552 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
177
               

               
Alignm identity:
               
131
               

               
Alignm E-value:
               
7e-23
               

               
Alignm gaps (pig, cow):
               
24, 44
               

               
Conread position:
               
340-514
               

               
Cow position:
               
chr3:42589077-42589245 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
180
               

               
Alignm identity:
               
135
               

               
Alignm E-value:
               
2e-23
               

               
Alignm gaps (pig, cow):
               
86, 38
               

               
Conread position:
               
340-516
               

               
Cow position:
               
chr3:36240075-36240257 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
183
               

               
Alignm identity:
               
129
               

               
Alignm E-value:
               
2e-21
               

               
Alignm gaps (pig, cow):
               
31, 0
               

               
Conread position:
               
340-521
               

               
Cow position:
               
chr3:18326856-18326676 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
187
               

               
Alignm identity:
               
138
               

               
Alignm E-value:
               
9e-25
               

               
Alignm gaps (pig, cow):
               
74, 26
               

               
Conread position:
               
340-522
               

               
Cow position:
               
chr3:20034181-20033996 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
186
               

               
Alignm identity:
               
129
               

               
Alignm E-value:
               
2e-22
               

               
Alignm gaps (pig, cow):
               
93, 0
               

               
Conread position:
               
340-523
               

               
Cow position:
               
chr3:18855043-18855230 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
188
               

               
Alignm identity:
               
134
               

               
Alignm E-value:
               
3e-25
               

               
Alignm gaps (pig, cow):
               
92, 0
               

               
Conread position:
               
340-528
               

               
Cow position:
               
chr3:5149987-5149795 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
193
               

               
Alignm identity:
               
134
               

               
Alignm E-value:
               
7e-23
               

               
Alignm gaps (pig, cow):
               
88, 0
               

               
Conread position:
               
340-532
               

               
Cow position:
               
chr3:1028678-1028486 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
195
               

               
Alignm identity:
               
148
               

               
Alignm E-value:
               
9e-36
               

               
Alignm gaps (pig, cow):
               
88, 21
               

               
Conread position:
               
340-532
               

               
Cow position:
               
chr3:26603587-26603385 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
203
               

               
Alignm identity:
               
143
               

               
Alignm E-value:
               
2e-22
               

               
Alignm gaps (pig, cow):
               
27, 0
               

               
Conread position:
               
340-532
               

               
Cow position:
               
chr3:38828727-38828912 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
194
               

               
Alignm identity:
               
152
               

               
Alignm E-value:
               
1e-36
               

               
Alignm gaps (pig, cow):
               
119, 131
               

               
Conread position:
               
340-532
               

               
Cow position:
               
chr3:48483146-48483339 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
197
               

               
Alignm identity:
               
157
               

               
Alignm E-value:
               
1.99993e-41
               

               
Alignm gaps (pig, cow):
               
96, 179
               

               
Conread position:
               
340-532
               

               
Cow position:
               
chr3:61224776-61224588 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
197
               

               
Alignm identity:
               
148
               

               
Alignm E-value:
               
2e-29
               

               
Alignm gaps (pig, cow):
               
86, 126
               

               
Conread position:
               
340-549
               

               
Cow position:
               
chr3:76138439-76138637 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
212
               

               
Alignm identity:
               
156
               

               
Alignm E-value:
               
1e-28
               

               
Alignm gaps (pig, cow):
               
123, 69
               

               
Conread position:
               
340-554
               

               
Cow position:
               
chr3:49119058-49118848 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
219
               

               
Alignm identity:
               
154
               

               
Alignm E-value:
               
3e-24
               

               
Alignm gaps (pig, cow):
               
88, 17
               

               
Conread position:
               
340-554
               

               
Cow position:
               
chr3:59392150-59391943 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
217
               

               
Alignm identity:
               
153
               

               
Alignm E-value:
               
3e-25
               

               
Alignm gaps (pig, cow):
               
122, 62
               

               
Conread position:
               
340-555
               

               
Cow position:
               
chr3:28902791-28902578 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
218
               

               
Alignm identity:
               
167
               

               
Alignm E-value:
               
4.99997e-41
               

               
Alignm gaps (pig, cow):
               
91, 111
               

               
Conread position:
               
340-556
               

               
Cow position:
               
chr3:75107742-75107957 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
219
               

               
Alignm identity:
               
147
               

               
Alignm E-value:
               
2e-22
               

               
Alignm gaps (pig, cow):
               
86, 125
               

               
Conread position:
               
340-557
               

               
Cow position:
               
chr3:5703146-5703362 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
220
               

               
Alignm identity:
               
174
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
122, 79
               

               
Conread position:
               
340-558
               

               
Cow position:
               
chr3:53604778-53604552 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
227
               

               
Alignm identity:
               
173
               

               
Alignm E-value:
               
1.99993e-41
               

               
Alignm gaps (pig, cow):
               
90, 0
               

               
Conread position:
               
340-565
               

               
Cow position:
               
chr3:18248920-18249147 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
230
               

               
Alignm identity:
               
165
               

               
Alignm E-value:
               
2e-33
               

               
Alignm gaps (pig, cow):
               
88, 207
               

               
Conread position:
               
340-565
               

               
Cow position:
               
chr3:44959910-44960137 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
230
               

               
Alignm identity:
               
176
               

               
Alignm E-value:
               
1.96182e-44
               

               
Alignm gaps (pig, cow):
               
88, 208
               

               
Conread position:
               
340-565
               

               
Cow position:
               
chr3:64196794-64197017 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
228
               

               
Alignm identity:
               
162
               

               
Alignm E-value:
               
2e-31
               

               
Alignm gaps (pig, cow):
               
86, 133
               

               
Conread position:
               
340-570
               

               
Cow position:
               
chr3:18831389-18831619 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
239
               

               
Alignm identity:
               
174
               

               
Alignm E-value:
               
6e-32
               

               
Alignm gaps (pig, cow):
               
55, 128
               

               
Conread position:
               
340-574
               

               
Cow position:
               
chr3:48852002-48851765 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
239
               

               
Alignm identity:
               
164
               

               
Alignm E-value:
               
1e-28
               

               
Alignm gaps (pig, cow):
               
82, 207
               

               
Conread position:
               
340-574
               

               
Cow position:
               
chr3:80733885-80733646 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
241
               

               
Alignm identity:
               
166
               

               
Alignm E-value:
               
1e-28
               

               
Alignm gaps (pig, cow):
               
88, 198
               

               
Conread position:
               
340-575
               

               
Cow position:
               
chr3:5551845-5551604 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
242
               

               
Alignm identity:
               
166
               

               
Alignm E-value:
               
4e-28
               

               
Alignm gaps (pig, cow):
               
10, 0
               

               
Conread position:
               
340-575
               

               
Cow position:
               
chr3:36375568-36375334 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
241
               

               
Alignm identity:
               
180
               

               
Alignm E-value:
               
4e-38
               

               
Alignm gaps (pig, cow):
               
88, 17
               

               
Conread position:
               
340-576
               

               
Cow position:
               
chr3:8591404-8591164 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
242
               

               
Alignm identity:
               
164
               

               
Alignm E-value:
               
1e-26
               

               
Alignm gaps (pig, cow):
               
90, 208
               

               
Conread position:
               
340-578
               

               
Cow position:
               
chr3:46559747-46559509 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
242
               

               
Alignm identity:
               
170
               

               
Alignm E-value:
               
2e-32
               

               
Alignm gaps (pig, cow):
               
88, 146
               

               
Conread position:
               
341-532
               

               
Cow position:
               
chr3:20021238-20021429 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
194
               

               
Alignm identity:
               
145
               

               
Alignm E-value:
               
2e-33
               

               
Alignm gaps (pig, cow):
               
85, 122
               

               
Conread position:
               
341-535
               

               
Cow position:
               
chr3:1890140-1889942 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
200
               

               
Alignm identity:
               
146
               

               
Alignm E-value:
               
2e-29
               

               
Alignm gaps (pig, cow):
               
94, 88
               

               
Conread position:
               
341-547
               

               
Cow position:
               
chr3:4120397-4120195 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
209
               

               
Alignm identity:
               
159
               

               
Alignm E-value:
               
3e-35
               

               
Alignm gaps (pig, cow):
               
81, 116
               

               
Conread position:
               
341-549
               

               
Cow position:
               
chr3:48363045-48363247 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
211
               

               
Alignm identity:
               
150
               

               
Alignm E-value:
               
3e-24
               

               
Alignm gaps (pig, cow):
               
85, 23
               

               
Conread position:
               
341-552
               

               
Cow position:
               
chr3:3883846-3883638 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
214
               

               
Alignm identity:
               
152
               

               
Alignm E-value:
               
4e-28
               

               
Alignm gaps (pig, cow):
               
83, 121
               

               
Conread position:
               
341-554
               

               
Cow position:
               
chr3:3584682-3584897 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
218
               

               
Alignm identity:
               
151
               

               
Alignm E-value:
               
1e-25
               

               
Alignm gaps (pig, cow):
               
87, 109
               

               
Conread position:
               
341-556
               

               
Cow position:
               
chr3:49363078-49363295 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
221
               

               
Alignm identity:
               
158
               

               
Alignm E-value:
               
5e-30
               

               
Alignm gaps (pig, cow):
               
85, 126
               

               
Conread position:
               
341-557
               

               
Cow position:
               
chr3:43233475-43233689 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
219
               

               
Alignm identity:
               
155
               

               
Alignm E-value:
               
5e-30
               

               
Alignm gaps (pig, cow):
               
87, 134
               

               
Conread position:
               
342-530
               

               
Cow position:
               
chr3:53875795-53875603 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
193
               

               
Alignm identity:
               
150
               

               
Alignm E-value:
               
1e-38
               

               
Alignm gaps (pig, cow):
               
86, 0
               

               
Conread position:
               
342-580
               

               
Cow position:
               
chr3:32317861-32317623 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
242
               

               
Alignm identity:
               
171
               

               
Alignm E-value:
               
2e-33
               

               
Alignm gaps (pig, cow):
               
86, 204
               

               
Conread position:
               
343-556
               

               
Cow position:
               
chr3:78071821-78071607 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
217
               

               
Alignm identity:
               
165
               

               
Alignm E-value:
               
2e-40
               

               
Alignm gaps (pig, cow):
               
20, 131
               

               
Conread position:
               
343-560
               

               
Cow position:
               
chr3:14518108-14517892 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
224
               

               
Alignm identity:
               
163
               

               
Alignm E-value:
               
5e-30
               

               
Alignm gaps (pig, cow):
               
85, 139
               

               
Conread position:
               
343-565
               

               
Cow position:
               
chr3:28897048-28896830 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
225
               

               
Alignm identity:
               
172
               

               
Alignm E-value:
               
4.99997e-41
               

               
Alignm gaps (pig, cow):
               
85, 15
               

               
Conread position:
               
344-532
               

               
Cow position:
               
chr3:15160492-15160678 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
191
               

               
Alignm identity:
               
151
               

               
Alignm E-value:
               
1e-38
               

               
Alignm gaps (pig, cow):
               
82, 121
               

               
Conread position:
               
344-553
               

               
Cow position:
               
chr3:18479326-18479114 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
213
               

               
Alignm identity:
               
159
               

               
Alignm E-value:
               
1e-37
               

               
Alignm gaps (pig, cow):
               
79, 0
               

               
Conread position:
               
344-555
               

               
Cow position:
               
chr3:7381857-7381649 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
216
               

               
Alignm identity:
               
159
               

               
Alignm E-value:
               
2e-31
               

               
Alignm gaps (pig, cow):
               
82, 40
               

               
Conread position:
               
344-565
               

               
Cow position:
               
chr3:39812023-39812253 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
238
               

               
Alignm identity:
               
172
               

               
Alignm E-value:
               
3e-26
               

               
Alignm gaps (pig, cow):
               
82, 34
               

               
Conread position:
               
345-516
               

               
Cow position:
               
chr3:22734291-22734113 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
182
               

               
Alignm identity:
               
135
               

               
Alignm E-value:
               
8e-24
               

               
Alignm gaps (pig, cow):
               
47, 13
               

               
Conread position:
               
345-532
               

               
Cow position:
               
chr3:14589268-14589069 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
201
               

               
Alignm identity:
               
150
               

               
Alignm E-value:
               
1e-27
               

               
Alignm gaps (pig, cow):
               
59, 110
               

               
Conread position:
               
345-539
               

               
Cow position:
               
chr3:37848886-37848688 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
202
               

               
Alignm identity:
               
142
               

               
Alignm E-value:
               
6e-22
               

               
Alignm gaps (pig, cow):
               
70, 77
               

               
Conread position:
               
346-555
               

               
Cow position:
               
chr3:13882547-13882334 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
215
               

               
Alignm identity:
               
165
               

               
Alignm E-value:
               
2e-40
               

               
Alignm gaps (pig, cow):
               
76, 60
               

               
Conread position:
               
346-556
               

               
Cow position:
               
chr3:6299431-6299648 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
220
               

               
Alignm identity:
               
162
               

               
Alignm E-value:
               
2e-32
               

               
Alignm gaps (pig, cow):
               
82, 17
               

               
Conread position:
               
346-556
               

               
Cow position:
               
chr3:76056311-76056098 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
218
               

               
Alignm identity:
               
172
               

               
Alignm E-value:
               
7.00649e-43
               

               
Alignm gaps (pig, cow):
               
80, 119
               

               
Conread position:
               
347-555
               

               
Cow position:
               
chr3:24516236-24516022 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
215
               

               
Alignm identity:
               
150
               

               
Alignm E-value:
               
1e-26
               

               
Alignm gaps (pig, cow):
               
51, 0
               

               
Conread position:
               
347-564
               

               
Cow position:
               
chr3:64800574-64800349 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
227
               

               
Alignm identity:
               
165
               

               
Alignm E-value:
               
6e-31
               

               
Alignm gaps (pig, cow):
               
75, 10
               

               
Conread position:
               
348-532
               

               
Cow position:
               
chr3:9718275-9718088 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
189
               

               
Alignm identity:
               
147
               

               
Alignm E-value:
               
3e-36
               

               
Alignm gaps (pig, cow):
               
77, 20
               

               
Conread position:
               
348-541
               

               
Cow position:
               
chr3:44534555-44534364 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
199
               

               
Alignm identity:
               
151
               

               
Alignm E-value:
               
6e-31
               

               
Alignm gaps (pig, cow):
               
78, 30
               

               
Conread position:
               
348-548
               

               
Cow position:
               
chr3:19611373-19611176 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
203
               

               
Alignm identity:
               
144
               

               
Alignm E-value:
               
3e-25
               

               
Alignm gaps (pig, cow):
               
78, 11
               

               
Conread position:
               
348-552
               

               
Cow position:
               
chr3:75966805-75966601 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
210
               

               
Alignm identity:
               
163
               

               
Alignm E-value:
               
4e-38
               

               
Alignm gaps (pig, cow):
               
78, 35
               

               
Conread position:
               
348-553
               

               
Cow position:
               
chr3:27246983-27246785 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
208
               

               
Alignm identity:
               
153
               

               
Alignm E-value:
               
5e-29
               

               
Alignm gaps (pig, cow):
               
78, 116
               

               
Conread position:
               
348-580
               

               
Cow position:
               
chr3:84807352-84807117 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
240
               

               
Alignm identity:
               
177
               

               
Alignm E-value:
               
3e-36
               

               
Alignm gaps (pig, cow):
               
78, 168
               

               
Conread position:
               
349-529
               

               
Cow position:
               
chr3:27286497-27286673 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
183
               

               
Alignm identity:
               
141
               

               
Alignm E-value:
               
6e-32
               

               
Alignm gaps (pig, cow):
               
77, 9
               

               
Conread position:
               
349-532
               

               
Cow position:
               
chr3:40145441-40145628 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
188
               

               
Alignm identity:
               
154
               

               
Alignm E-value:
               
7.00649e-44
               

               
Alignm gaps (pig, cow):
               
73, 0
               

               
Conread position:
               
349-554
               

               
Cow position:
               
chr3:47199150-47198944 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
210
               

               
Alignm identity:
               
162
               

               
Alignm E-value:
               
4e-39
               

               
Alignm gaps (pig, cow):
               
77, 150
               

               
Conread position:
               
349-559
               

               
Cow position:
               
chr3:12669113-12669326 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
217
               

               
Alignm identity:
               
156
               

               
Alignm E-value:
               
1e-28
               

               
Alignm gaps (pig, cow):
               
80, 40
               

               
Conread position:
               
349-565
               

               
Cow position:
               
chr3:72087213-72087435 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
224
               

               
Alignm identity:
               
158
               

               
Alignm E-value:
               
4e-27
               

               
Alignm gaps (pig, cow):
               
77, 165
               

               
Conread position:
               
349-575
               

               
Cow position:
               
chr3:79730493-79730721 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
232
               

               
Alignm identity:
               
163
               

               
Alignm E-value:
               
1e-28
               

               
Alignm gaps (pig, cow):
               
85, 76
               

               
Conread position:
               
349-576
               

               
Cow position:
               
chr3:32376791-32377016 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
230
               

               
Alignm identity:
               
168
               

               
Alignm E-value:
               
3e-36
               

               
Alignm gaps (pig, cow):
               
80, 25
               

               
Conread position:
               
350-480
               

               
Cow position:
               
chr3:28937627-28937492 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
136
               

               
Alignm identity:
               
109
               

               
Alignm E-value:
               
3e-26
               

               
Alignm gaps (pig, cow):
               
76, 0
               

               
Conread position:
               
350-480
               

               
Cow position:
               
chr3:78201588-78201717 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
131
               

               
Alignm identity:
               
104
               

               
Alignm E-value:
               
3e-26
               

               
Alignm gaps (pig, cow):
               
105, 0
               

               
Conread position:
               
350-532
               

               
Cow position:
               
chr3:654104-653918 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
187
               

               
Alignm identity:
               
129
               

               
Alignm E-value:
               
2e-21
               

               
Alignm gaps (pig, cow):
               
78, 0
               

               
Conread position:
               
350-552
               

               
Cow position:
               
chr3:54350463-54350247 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
217
               

               
Alignm identity:
               
160
               

               
Alignm E-value:
               
5e-29
               

               
Alignm gaps (pig, cow):
               
72, 0
               

               
Conread position:
               
350-554
               

               
Cow position:
               
chr3:73589793-73589583 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
211
               

               
Alignm identity:
               
146
               

               
Alignm E-value:
               
3e-24
               

               
Alignm gaps (pig, cow):
               
80, 0
               

               
Conread position:
               
350-556
               

               
Cow position:
               
chr3:63201895-63202113 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
219
               

               
Alignm identity:
               
156
               

               
Alignm E-value:
               
1e-25
               

               
Alignm gaps (pig, cow):
               
5, 0
               

               
Conread position:
               
350-557
               

               
Cow position:
               
chr3:4271350-4271551 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
210
               

               
Alignm identity:
               
154
               

               
Alignm E-value:
               
2e-30
               

               
Alignm gaps (pig, cow):
               
78, 116
               

               
Conread position:
               
350-564
               

               
Cow position:
               
chr3:51150106-51150329 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
225
               

               
Alignm identity:
               
177
               

               
Alignm E-value:
               
7.00649e-44
               

               
Alignm gaps (pig, cow):
               
78, 172
               

               
Conread position:
               
350-565
               

               
Cow position:
               
chr3:65308476-65308259 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
220
               

               
Alignm identity:
               
162
               

               
Alignm E-value:
               
3e-35
               

               
Alignm gaps (pig, cow):
               
78, 59
               

               
Conread position:
               
350-576
               

               
Cow position:
               
chr3:45314322-45314555 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
236
               

               
Alignm identity:
               
170
               

               
Alignm E-value:
               
2e-32
               

               
Alignm gaps (pig, cow):
               
76, 202
               

               
Conread position:
               
351-532
               

               
Cow position:
               
chr3:12178034-12178222 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
190
               

               
Alignm identity:
               
142
               

               
Alignm E-value:
               
1e-28
               

               
Alignm gaps (pig, cow):
               
9, 48
               

               
Conread position:
               
351-532
               

               
Cow position:
               
chr3:44720478-44720659 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
185
               

               
Alignm identity:
               
138
               

               
Alignm E-value:
               
1e-28
               

               
Alignm gaps (pig, cow):
               
11, 70
               

               
Conread position:
               
351-532
               

               
Cow position:
               
chr3:59271812-59271992 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
184
               

               
Alignm identity:
               
145
               

               
Alignm E-value:
               
1e-36
               

               
Alignm gaps (pig, cow):
               
75, 27
               

               
Conread position:
               
351-532
               

               
Cow position:
               
chr3:70402623-70402799 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
184
               

               
Alignm identity:
               
146
               

               
Alignm E-value:
               
3e-35
               

               
Alignm gaps (pig, cow):
               
76, 55
               

               
Conread position:
               
351-544
               

               
Cow position:
               
chr3:61024044-61023843 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
202
               

               
Alignm identity:
               
168
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
75, 0
               

               
Conread position:
               
351-547
               

               
Cow position:
               
chr3:35883953-35883756 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
201
               

               
Alignm identity:
               
145
               

               
Alignm E-value:
               
4e-27
               

               
Alignm gaps (pig, cow):
               
77, 10
               

               
Conread position:
               
351-547
               

               
Cow position:
               
chr3:58101658-58101851 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
200
               

               
Alignm identity:
               
154
               

               
Alignm E-value:
               
8e-35
               

               
Alignm gaps (pig, cow):
               
84, 66
               

               
Conread position:
               
351-547
               

               
Cow position:
               
chr3:59268350-59268550 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
201
               

               
Alignm identity:
               
142
               

               
Alignm E-value:
               
1e-26
               

               
Alignm gaps (pig, cow):
               
79, 0
               

               
Conread position:
               
351-548
               

               
Cow position:
               
chr3:62789973-62789773 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
204
               

               
Alignm identity:
               
159
               

               
Alignm E-value:
               
4e-38
               

               
Alignm gaps (pig, cow):
               
77, 10
               

               
Conread position:
               
351-553
               

               
Cow position:
               
chr3:59947644-59947850 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
207
               

               
Alignm identity:
               
155
               

               
Alignm E-value:
               
1e-36
               

               
Alignm gaps (pig, cow):
               
80, 0
               

               
Conread position:
               
351-555
               

               
Cow position:
               
chr3:24304646-24304439 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
215
               

               
Alignm identity:
               
157
               

               
Alignm E-value:
               
1e-26
               

               
Alignm gaps (pig, cow):
               
111, 70
               

               
Conread position:
               
351-555
               

               
Cow position:
               
chr3:28323198-28323395 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
208
               

               
Alignm identity:
               
150
               

               
Alignm E-value:
               
9e-25
               

               
Alignm gaps (pig, cow):
               
75, 13
               

               
Conread position:
               
351-556
               

               
Cow position:
               
chr3:43389149-43388940 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
210
               

               
Alignm identity:
               
162
               

               
Alignm E-value:
               
6.00036e-42
               

               
Alignm gaps (pig, cow):
               
77, 0
               

               
Conread position:
               
351-556
               

               
Cow position:
               
chr3:63860632-63860423 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
212
               

               
Alignm identity:
               
166
               

               
Alignm E-value:
               
1.99993e-41
               

               
Alignm gaps (pig, cow):
               
77, 127
               

               
Conread position:
               
351-557
               

               
Cow position:
               
chr3:985993-986201 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
210
               

               
Alignm identity:
               
167
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
84, 79
               

               
Conread position:
               
351-557
               

               
Cow position:
               
chr3:77171294-77171504 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
211
               

               
Alignm identity:
               
154
               

               
Alignm E-value:
               
8e-34
               

               
Alignm gaps (pig, cow):
               
77, 0
               

               
Conread position:
               
352-532
               

               
Cow position:
               
chr3:31793904-31793720 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
185
               

               
Alignm identity:
               
137
               

               
Alignm E-value:
               
2e-29
               

               
Alignm gaps (pig, cow):
               
76, 0
               

               
Conread position:
               
352-565
               

               
Cow position:
               
chr3:4518198-4517988 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
218
               

               
Alignm identity:
               
164
               

               
Alignm E-value:
               
3e-34
               

               
Alignm gaps (pig, cow):
               
74, 9
               

               
Conread position:
               
352-570
               

               
Cow position:
               
chr3:45743885-45744107 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
227
               

               
Alignm identity:
               
166
               

               
Alignm E-value:
               
2e-31
               

               
Alignm gaps (pig, cow):
               
16, 62
               

               
Conread position:
               
352-582
               

               
Cow position:
               
chr3:41366730-41366490 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
242
               

               
Alignm identity:
               
182
               

               
Alignm E-value:
               
2e-40
               

               
Alignm gaps (pig, cow):
               
74, 202
               

               
Conread position:
               
353-551
               

               
Cow position:
               
chr3:59681923-59681727 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
201
               

               
Alignm identity:
               
153
               

               
Alignm E-value:
               
9e-36
               

               
Alignm gaps (pig, cow):
               
75, 110
               

               
Conread position:
               
353-553
               

               
Cow position:
               
chr3:8526383-8526197 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
203
               

               
Alignm identity:
               
148
               

               
Alignm E-value:
               
2e-23
               

               
Alignm gaps (pig, cow):
               
73, 36
               

               
Conread position:
               
353-556
               

               
Cow position:
               
chr3:50350988-50350793 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
208
               

               
Alignm identity:
               
151
               

               
Alignm E-value:
               
3e-24
               

               
Alignm gaps (pig, cow):
               
49, 100
               

               
Conread position:
               
354-523
               

               
Cow position:
               
chr3:6288560-6288387 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
174
               

               
Alignm identity:
               
122
               

               
Alignm E-value:
               
6e-21
               

               
Alignm gaps (pig, cow):
               
74, 0
               

               
Conread position:
               
354-532
               

               
Cow position:
               
chr3:62312778-62312959 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
183
               

               
Alignm identity:
               
146
               

               
Alignm E-value:
               
4e-38
               

               
Alignm gaps (pig, cow):
               
74, 45
               

               
Conread position:
               
354-532
               

               
Cow position:
               
chr3:62370037-62370218 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
183
               

               
Alignm identity:
               
152
               

               
Alignm E-value:
               
7.00649e-44
               

               
Alignm gaps (pig, cow):
               
74, 45
               

               
Conread position:
               
354-547
               

               
Cow position:
               
chr3:78258772-78258574 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
200
               

               
Alignm identity:
               
149
               

               
Alignm E-value:
               
2e-31
               

               
Alignm gaps (pig, cow):
               
74, 7
               

               
Conread position:
               
354-555
               

               
Cow position:
               
chr3:36412106-36411900 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
209
               

               
Alignm identity:
               
155
               

               
Alignm E-value:
               
2e-31
               

               
Alignm gaps (pig, cow):
               
50, 174
               

               
Conread position:
               
354-556
               

               
Cow position:
               
chr3:26338038-26337825 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
214
               

               
Alignm identity:
               
162
               

               
Alignm E-value:
               
8e-35
               

               
Alignm gaps (pig, cow):
               
74, 0
               

               
Conread position:
               
354-559
               

               
Cow position:
               
chr3:36189872-36190086 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
220
               

               
Alignm identity:
               
161
               

               
Alignm E-value:
               
8e-24
               

               
Alignm gaps (pig, cow):
               
40, 159
               

               
Conread position:
               
354-562
               

               
Cow position:
               
chr3:73943892-73943681 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
214
               

               
Alignm identity:
               
147
               

               
Alignm E-value:
               
2e-23
               

               
Alignm gaps (pig, cow):
               
68, 77
               

               
Conread position:
               
354-565
               

               
Cow position:
               
chr3:46146744-46146528 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
218
               

               
Alignm identity:
               
149
               

               
Alignm E-value:
               
2e-23
               

               
Alignm gaps (pig, cow):
               
74, 7
               

               
Conread position:
               
354-565
               

               
Cow position:
               
chr3:46271807-46271594 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
216
               

               
Alignm identity:
               
149
               

               
Alignm E-value:
               
3e-24
               

               
Alignm gaps (pig, cow):
               
80, 193
               

               
Conread position:
               
354-576
               

               
Cow position:
               
chr3:8775300-8775524 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
227
               

               
Alignm identity:
               
156
               

               
Alignm E-value:
               
1e-25
               

               
Alignm gaps (pig, cow):
               
74, 192
               

               
Conread position:
               
354-580
               

               
Cow position:
               
chr3:31168531-31168761 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
233
               

               
Alignm identity:
               
159
               

               
Alignm E-value:
               
3e-24
               

               
Alignm gaps (pig, cow):
               
178, 77
               

               
Conread position:
               
355-532
               

               
Cow position:
               
chr3:25702359-25702170 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
190
               

               
Alignm identity:
               
150
               

               
Alignm E-value:
               
9e-36
               

               
Alignm gaps (pig, cow):
               
71, 0
               

               
Conread position:
               
355-532
               

               
Cow position:
               
chr3:80172982-80173160 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
180
               

               
Alignm identity:
               
134
               

               
Alignm E-value:
               
2e-29
               

               
Alignm gaps (pig, cow):
               
67, 101
               

               
Conread position:
               
355-572
               

               
Cow position:
               
chr3:3164127-3163909 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
225
               

               
Alignm identity:
               
164
               

               
Alignm E-value:
               
5e-30
               

               
Alignm gaps (pig, cow):
               
73, 95
               

               
Conread position:
               
356-542
               

               
Cow position:
               
chr3:63780515-63780322 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
195
               

               
Alignm identity:
               
137
               

               
Alignm E-value:
               
2e-21
               

               
Alignm gaps (pig, cow):
               
67, 60
               

               
Conread position:
               
357-509
               

               
Cow position:
               
chr3:31352889-31352737 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
155
               

               
Alignm identity:
               
117
               

               
Alignm E-value:
               
3e-24
               

               
Alignm gaps (pig, cow):
               
69, 11
               

               
Conread position:
               
357-575
               

               
Cow position:
               
chr3:79398127-79398346 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
223
               

               
Alignm identity:
               
167
               

               
Alignm E-value:
               
1e-37
               

               
Alignm gaps (pig, cow):
               
65, 190
               

               
Conread position:
               
358-541
               

               
Cow position:
               
chr3:70431414-70431604 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
192
               

               
Alignm identity:
               
152
               

               
Alignm E-value:
               
3e-37
               

               
Alignm gaps (pig, cow):
               
18, 58
               

               
Conread position:
               
358-547
               

               
Cow position:
               
chr3:6265771-6265966 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
196
               

               
Alignm identity:
               
137
               

               
Alignm E-value:
               
2e-23
               

               
Alignm gaps (pig, cow):
               
56, 0
               

               
Conread position:
               
358-555
               

               
Cow position:
               
chr3:51153036-51153233 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
205
               

               
Alignm identity:
               
151
               

               
Alignm E-value:
               
4e-27
               

               
Alignm gaps (pig, cow):
               
102, 8
               

               
Conread position:
               
358-565
               

               
Cow position:
               
chr3:76168646-76168428 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
219
               

               
Alignm identity:
               
172
               

               
Alignm E-value:
               
7.00649e-43
               

               
Alignm gaps (pig, cow):
               
70, 0
               

               
Conread position:
               
359-511
               

               
Cow position:
               
chr3:58010841-58010688 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
157
               

               
Alignm identity:
               
124
               

               
Alignm E-value:
               
1e-28
               

               
Alignm gaps (pig, cow):
               
67, 15
               

               
Conread position:
               
359-532
               

               
Cow position:
               
chr3:20066167-20065986 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
182
               

               
Alignm identity:
               
141
               

               
Alignm E-value:
               
2e-32
               

               
Alignm gaps (pig, cow):
               
30, 0
               

               
Conread position:
               
359-532
               

               
Cow position:
               
chr3:25735919-25735742 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
178
               

               
Alignm identity:
               
142
               

               
Alignm E-value:
               
4e-38
               

               
Alignm gaps (pig, cow):
               
67, 0
               

               
Conread position:
               
359-532
               

               
Cow position:
               
chr3:83812259-83812439 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
185
               

               
Alignm identity:
               
137
               

               
Alignm E-value:
               
6e-22
               

               
Alignm gaps (pig, cow):
               
63, 24
               

               
Conread position:
               
359-548
               

               
Cow position:
               
chr3:84154402-84154582 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
190
               

               
Alignm identity:
               
136
               

               
Alignm E-value:
               
2e-22
               

               
Alignm gaps (pig, cow):
               
35, 0
               

               
Conread position:
               
359-552
               

               
Cow position:
               
chr3:54557661-54557847 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
197
               

               
Alignm identity:
               
143
               

               
Alignm E-value:
               
2e-23
               

               
Alignm gaps (pig, cow):
               
72, 88
               

               
Conread position:
               
359-554
               

               
Cow position:
               
chr3:18700124-18699926 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
200
               

               
Alignm identity:
               
156
               

               
Alignm E-value:
               
5e-40
               

               
Alignm gaps (pig, cow):
               
67, 188
               

               
Conread position:
               
359-557
               

               
Cow position:
               
chr3:59885527-59885716 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
201
               

               
Alignm identity:
               
150
               

               
Alignm E-value:
               
4e-28
               

               
Alignm gaps (pig, cow):
               
67, 38
               

               
Conread position:
               
359-563
               

               
Cow position:
               
chr3:53266464-53266669 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
209
               

               
Alignm identity:
               
144
               

               
Alignm E-value:
               
7e-23
               

               
Alignm gaps (pig, cow):
               
69, 157
               

               
Conread position:
               
359-565
               

               
Cow position:
               
chr3:54050044-54049838 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
210
               

               
Alignm identity:
               
147
               

               
Alignm E-value:
               
1e-25
               

               
Alignm gaps (pig, cow):
               
75, 178
               

               
Conread position:
               
360-532
               

               
Cow position:
               
chr3:22899753-22899570 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
184
               

               
Alignm identity:
               
139
               

               
Alignm E-value:
               
4e-28
               

               
Alignm gaps (pig, cow):
               
32, 0
               

               
Conread position:
               
360-532
               

               
Cow position:
               
chr3:83671843-83672016 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
175
               

               
Alignm identity:
               
128
               

               
Alignm E-value:
               
3e-26
               

               
Alignm gaps (pig, cow):
               
66, 93
               

               
Conread position:
               
360-558
               

               
Cow position:
               
chr3:28884173-28883973 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
202
               

               
Alignm identity:
               
153
               

               
Alignm E-value:
               
1e-36
               

               
Alignm gaps (pig, cow):
               
66, 114
               

               
Conread position:
               
361-530
               

               
Cow position:
               
chr3:74119440-74119271 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
172
               

               
Alignm identity:
               
126
               

               
Alignm E-value:
               
1e-25
               

               
Alignm gaps (pig, cow):
               
67, 154
               

               
Conread position:
               
361-532
               

               
Cow position:
               
chr3:69205007-69205177 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
174
               

               
Alignm identity:
               
128
               

               
Alignm E-value:
               
1e-25
               

               
Alignm gaps (pig, cow):
               
67, 33
               

               
Conread position:
               
361-547
               

               
Cow position:
               
chr3:18179947-18180139 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
194
               

               
Alignm identity:
               
135
               

               
Alignm E-value:
               
6e-21
               

               
Alignm gaps (pig, cow):
               
66, 89
               

               
Conread position:
               
361-550
               

               
Cow position:
               
chr3:56582837-56583027 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
192
               

               
Alignm identity:
               
136
               

               
Alignm E-value:
               
3e-26
               

               
Alignm gaps (pig, cow):
               
121, 68
               

               
Conread position:
               
361-550
               

               
Cow position:
               
chr3:65022283-65022482 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
200
               

               
Alignm identity:
               
145
               

               
Alignm E-value:
               
4e-27
               

               
Alignm gaps (pig, cow):
               
65, 0
               

               
Conread position:
               
361-552
               

               
Cow position:
               
chr3:44207889-44207691 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
201
               

               
Alignm identity:
               
152
               

               
Alignm E-value:
               
6e-32
               

               
Alignm gaps (pig, cow):
               
71, 48
               

               
Conread position:
               
361-555
               

               
Cow position:
               
chr3:423357-423555 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
199
               

               
Alignm identity:
               
147
               

               
Alignm E-value:
               
7e-33
               

               
Alignm gaps (pig, cow):
               
67, 0
               

               
Conread position:
               
361-555
               

               
Cow position:
               
chr3:38331623-38331426 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
198
               

               
Alignm identity:
               
144
               

               
Alignm E-value:
               
2e-30
               

               
Alignm gaps (pig, cow):
               
69, 0
               

               
Conread position:
               
361-565
               

               
Cow position:
               
chr3:59317691-59317892 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
205
               

               
Alignm identity:
               
161
               

               
Alignm E-value:
               
2.00386e-43
               

               
Alignm gaps (pig, cow):
               
100, 0
               

               
Conread position:
               
361-576
               

               
Cow position:
               
chr3:58558268-58558487 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
220
               

               
Alignm identity:
               
149
               

               
Alignm E-value:
               
9e-25
               

               
Alignm gaps (pig, cow):
               
67, 0
               

               
Conread position:
               
362-535
               

               
Cow position:
               
chr3:6579478-6579644 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
176
               

               
Alignm identity:
               
138
               

               
Alignm E-value:
               
5e-30
               

               
Alignm gaps (pig, cow):
               
66, 28
               

               
Conread position:
               
362-547
               

               
Cow position:
               
chr3:77098835-77098648 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
190
               

               
Alignm identity:
               
136
               

               
Alignm E-value:
               
9e-25
               

               
Alignm gaps (pig, cow):
               
15, 105
               

               
Conread position:
               
362-554
               

               
Cow position:
               
chr3:55730480-55730284 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
198
               

               
Alignm identity:
               
161
               

               
Alignm E-value:
               
8.40779e-45
               

               
Alignm gaps (pig, cow):
               
5, 186
               

               
Conread position:
               
362-557
               

               
Cow position:
               
chr3:75687942-75687745 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
200
               

               
Alignm identity:
               
139
               

               
Alignm E-value:
               
7e-23
               

               
Alignm gaps (pig, cow):
               
66, 176
               

               
Conread position:
               
362-558
               

               
Cow position:
               
chr3:60370972-60371177 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
207
               

               
Alignm identity:
               
162
               

               
Alignm E-value:
               
1e-38
               

               
Alignm gaps (pig, cow):
               
66, 147
               

               
Conread position:
               
362-562
               

               
Cow position:
               
chr3:81616463-81616259 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
205
               

               
Alignm identity:
               
147
               

               
Alignm E-value:
               
5e-30
               

               
Alignm gaps (pig, cow):
               
69, 0
               

               
Conread position:
               
363-532
               

               
Cow position:
               
chr3:23735097-23734928 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
172
               

               
Alignm identity:
               
125
               

               
Alignm E-value:
               
3e-24
               

               
Alignm gaps (pig, cow):
               
68, 103
               

               
Conread position:
               
363-553
               

               
Cow position:
               
chr3:54903555-54903751 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
197
               

               
Alignm identity:
               
143
               

               
Alignm E-value:
               
1e-28
               

               
Alignm gaps (pig, cow):
               
65, 0
               

               
Conread position:
               
363-554
               

               
Cow position:
               
chr3:55733947-55734141 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
195
               

               
Alignm identity:
               
139
               

               
Alignm E-value:
               
4e-27
               

               
Alignm gaps (pig, cow):
               
61, 0
               

               
Conread position:
               
363-557
               

               
Cow position:
               
chr3:37641316-37641512 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
198
               

               
Alignm identity:
               
148
               

               
Alignm E-value:
               
8e-34
               

               
Alignm gaps (pig, cow):
               
21, 93
               

               
Conread position:
               
364-556
               

               
Cow position:
               
chr3:44594616-44594814 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
202
               

               
Alignm identity:
               
144
               

               
Alignm E-value:
               
7e-23
               

               
Alignm gaps (pig, cow):
               
62, 23
               

               
Conread position:
               
366-512
               

               
Cow position:
               
chr3:35582834-35582982 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
149
               

               
Alignm identity:
               
110
               

               
Alignm E-value:
               
2e-22
               

               
Alignm gaps (pig, cow):
               
60, 0
               

               
Conread position:
               
366-532
               

               
Cow position:
               
chr3:79893504-79893335 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
170
               

               
Alignm identity:
               
136
               

               
Alignm E-value:
               
1e-36
               

               
Alignm gaps (pig, cow):
               
60, 0
               

               
Conread position:
               
366-533
               

               
Cow position:
               
chr3:83199505-83199675 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
171
               

               
Alignm identity:
               
138
               

               
Alignm E-value:
               
4e-38
               

               
Alignm gaps (pig, cow):
               
60, 0
               

               
Conread position:
               
366-542
               

               
Cow position:
               
chr3:19044772-19044597 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
179
               

               
Alignm identity:
               
141
               

               
Alignm E-value:
               
9e-36
               

               
Alignm gaps (pig, cow):
               
98, 53
               

               
Conread position:
               
366-552
               

               
Cow position:
               
chr3:36418488-36418306 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
189
               

               
Alignm identity:
               
133
               

               
Alignm E-value:
               
2e-21
               

               
Alignm gaps (pig, cow):
               
60, 11
               

               
Conread position:
               
366-553
               

               
Cow position:
               
chr3:80958517-80958322 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
197
               

               
Alignm identity:
               
157
               

               
Alignm E-value:
               
1e-39
               

               
Alignm gaps (pig, cow):
               
60, 33
               

               
Conread position:
               
366-554
               

               
Cow position:
               
chr3:83705543-83705353 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
193
               

               
Alignm identity:
               
142
               

               
Alignm E-value:
               
5e-29
               

               
Alignm gaps (pig, cow):
               
60, 23
               

               
Conread position:
               
366-555
               

               
Cow position:
               
chr3:15795213-15795405 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
193
               

               
Alignm identity:
               
133
               

               
Alignm E-value:
               
7e-23
               

               
Alignm gaps (pig, cow):
               
62, 0
               

               
Conread position:
               
366-556
               

               
Cow position:
               
chr3:15859385-15859196 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
194
               

               
Alignm identity:
               
150
               

               
Alignm E-value:
               
8e-35
               

               
Alignm gaps (pig, cow):
               
68, 100
               

               
Conread position:
               
366-556
               

               
Cow position:
               
chr3:16710806-16710605 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
202
               

               
Alignm identity:
               
145
               

               
Alignm E-value:
               
9e-25
               

               
Alignm gaps (pig, cow):
               
92, 0
               

               
Conread position:
               
366-556
               

               
Cow position:
               
chr3:21694218-21694412 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
196
               

               
Alignm identity:
               
151
               

               
Alignm E-value:
               
1e-36
               

               
Alignm gaps (pig, cow):
               
70, 131
               

               
Conread position:
               
366-556
               

               
Cow position:
               
chr3:37851490-37851687 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
199
               

               
Alignm identity:
               
153
               

               
Alignm E-value:
               
3e-34
               

               
Alignm gaps (pig, cow):
               
32, 126
               

               
Conread position:
               
366-556
               

               
Cow position:
               
chr3:58614450-58614654 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
205
               

               
Alignm identity:
               
154
               

               
Alignm E-value:
               
2e-30
               

               
Alignm gaps (pig, cow):
               
62, 0
               

               
Conread position:
               
366-556
               

               
Cow position:
               
chr3:62186145-62186343 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
199
               

               
Alignm identity:
               
149
               

               
Alignm E-value:
               
2e-32
               

               
Alignm gaps (pig, cow):
               
62, 0
               

               
Conread position:
               
366-556
               

               
Cow position:
               
chr3:83934719-83934909 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
193
               

               
Alignm identity:
               
149
               

               
Alignm E-value:
               
1e-37
               

               
Alignm gaps (pig, cow):
               
65, 100
               

               
Conread position:
               
366-570
               

               
Cow position:
               
chr3:57704330-57704535 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
212
               

               
Alignm identity:
               
151
               

               
Alignm E-value:
               
9e-25
               

               
Alignm gaps (pig, cow):
               
60, 32
               

               
Conread position:
               
367-532
               

               
Cow position:
               
chr3:29234687-29234517 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
172
               

               
Alignm identity:
               
137
               

               
Alignm E-value:
               
2e-33
               

               
Alignm gaps (pig, cow):
               
14, 159
               

               
Conread position:
               
367-556
               

               
Cow position:
               
chr3:17531743-17531552 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
193
               

               
Alignm identity:
               
143
               

               
Alignm E-value:
               
2e-31
               

               
Alignm gaps (pig, cow):
               
59, 174
               

               
Conread position:
               
367-556
               

               
Cow position:
               
chr3:20663554-20663357 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
198
               

               
Alignm identity:
               
138
               

               
Alignm E-value:
               
6e-22
               

               
Alignm gaps (pig, cow):
               
57, 0
               

               
Conread position:
               
367-559
               

               
Cow position:
               
chr3:28904965-28905161 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
197
               

               
Alignm identity:
               
141
               

               
Alignm E-value:
               
4e-28
               

               
Alignm gaps (pig, cow):
               
61, 0
               

               
Conread position:
               
368-525
               

               
Cow position:
               
chr3:80910591-80910751 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
161
               

               
Alignm identity:
               
127
               

               
Alignm E-value:
               
2e-32
               

               
Alignm gaps (pig, cow):
               
60, 0
               

               
Conread position:
               
368-551
               

               
Cow position:
               
chr3:83474741-83474934 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
194
               

               
Alignm identity:
               
136
               

               
Alignm E-value:
               
2e-21
               

               
Alignm gaps (pig, cow):
               
58, 0
               

               
Conread position:
               
368-554
               

               
Cow position:
               
chr3:59597174-59597356 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
189
               

               
Alignm identity:
               
140
               

               
Alignm E-value:
               
1e-27
               

               
Alignm gaps (pig, cow):
               
58, 96
               

               
Conread position:
               
368-556
               

               
Cow position:
               
chr3:11027270-11027467 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
198
               

               
Alignm identity:
               
147
               

               
Alignm E-value:
               
2e-30
               

               
Alignm gaps (pig, cow):
               
60, 0
               

               
Conread position:
               
368-557
               

               
Cow position:
               
chr3:80541215-80541407 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
195
               

               
Alignm identity:
               
138
               

               
Alignm E-value:
               
7e-23
               

               
Alignm gaps (pig, cow):
               
59, 6
               

               
Conread position:
               
369-532
               

               
Cow position:
               
chr3:24220581-24220419 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
166
               

               
Alignm identity:
               
127
               

               
Alignm E-value:
               
5e-29
               

               
Alignm gaps (pig, cow):
               
96, 53
               

               
Conread position:
               
369-548
               

               
Cow position:
               
chr3:8147528-8147346 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
185
               

               
Alignm identity:
               
139
               

               
Alignm E-value:
               
1e-28
               

               
Alignm gaps (pig, cow):
               
59, 9
               

               
Conread position:
               
369-557
               

               
Cow position:
               
chr3:23037512-23037322 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
193
               

               
Alignm identity:
               
145
               

               
Alignm E-value:
               
6e-32
               

               
Alignm gaps (pig, cow):
               
59, 81
               

               
Conread position:
               
369-565
               

               
Cow position:
               
chr3:635174-635377 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
205
               

               
Alignm identity:
               
159
               

               
Alignm E-value:
               
4e-38
               

               
Alignm gaps (pig, cow):
               
58, 141
               

               
Conread position:
               
369-570
               

               
Cow position:
               
chr3:32248008-32248214 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
208
               

               
Alignm identity:
               
155
               

               
Alignm E-value:
               
2e-33
               

               
Alignm gaps (pig, cow):
               
59, 195
               

               
Conread position:
               
369-576
               

               
Cow position:
               
chr3:76300767-76300977 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
213
               

               
Alignm identity:
               
161
               

               
Alignm E-value:
               
3e-36
               

               
Alignm gaps (pig, cow):
               
19, 179
               

               
Conread position:
               
370-519
               

               
Cow position:
               
chr3:73162390-73162248 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
152
               

               
Alignm identity:
               
117
               

               
Alignm E-value:
               
2e-22
               

               
Alignm gaps (pig, cow):
               
58, 21
               

               
Conread position:
               
370-532
               

               
Cow position:
               
chr3:5003633-5003793 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
165
               

               
Alignm identity:
               
131
               

               
Alignm E-value:
               
2e-32
               

               
Alignm gaps (pig, cow):
               
56, 8
               

               
Conread position:
               
370-547
               

               
Cow position:
               
chr3:61680315-61680493 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
182
               

               
Alignm identity:
               
140
               

               
Alignm E-value:
               
6e-32
               

               
Alignm gaps (pig, cow):
               
60, 37
               

               
Conread position:
               
370-550
               

               
Cow position:
               
chr3:8523155-8522975 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
182
               

               
Alignm identity:
               
127
               

               
Alignm E-value:
               
7e-23
               

               
Alignm gaps (pig, cow):
               
61, 17
               

               
Conread position:
               
370-554
               

               
Cow position:
               
chr3:2016433-2016615 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
187
               

               
Alignm identity:
               
146
               

               
Alignm E-value:
               
1e-36
               

               
Alignm gaps (pig, cow):
               
58, 93
               

               
Conread position:
               
371-556
               

               
Cow position:
               
chr3:6049290-6049096 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
195
               

               
Alignm identity:
               
141
               

               
Alignm E-value:
               
3e-25
               

               
Alignm gaps (pig, cow):
               
61, 0
               

               
Conread position:
               
371-556
               

               
Cow position:
               
chr3:21959658-21959850 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
194
               

               
Alignm identity:
               
140
               

               
Alignm E-value:
               
3e-25
               

               
Alignm gaps (pig, cow):
               
55, 133
               

               
Conread position:
               
373-549
               

               
Cow position:
               
chr3:17039613-17039793 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
183
               

               
Alignm identity:
               
138
               

               
Alignm E-value:
               
1e-28
               

               
Alignm gaps (pig, cow):
               
39, 155
               

               
Conread position:
               
374-528
               

               
Cow position:
               
chr3:8974846-8975004 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
159
               

               
Alignm identity:
               
117
               

               
Alignm E-value:
               
2e-23
               

               
Alignm gaps (pig, cow):
               
54, 0
               

               
Conread position:
               
374-530
               

               
Cow position:
               
chr3:16867825-16867982 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
161
               

               
Alignm identity:
               
119
               

               
Alignm E-value:
               
6e-21
               

               
Alignm gaps (pig, cow):
               
52, 67
               

               
Conread position:
               
374-530
               

               
Cow position:
               
chr3:59810427-59810268 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
161
               

               
Alignm identity:
               
120
               

               
Alignm E-value:
               
3e-24
               

               
Alignm gaps (pig, cow):
               
58, 24
               

               
Conread position:
               
374-531
               

               
Cow position:
               
chr3:5737752-5737906 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
159
               

               
Alignm identity:
               
120
               

               
Alignm E-value:
               
9e-25
               

               
Alignm gaps (pig, cow):
               
5, 45
               

               
Conread position:
               
374-543
               

               
Cow position:
               
chr3:4931839-4931658 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
182
               

               
Alignm identity:
               
139
               

               
Alignm E-value:
               
4e-27
               

               
Alignm gaps (pig, cow):
               
54, 0
               

               
Conread position:
               
374-554
               

               
Cow position:
               
chr3:60186147-60186331 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
190
               

               
Alignm identity:
               
141
               

               
Alignm E-value:
               
9e-25
               

               
Alignm gaps (pig, cow):
               
56, 28
               

               
Conread position:
               
374-556
               

               
Cow position:
               
chr3:77653930-77654106 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
186
               

               
Alignm identity:
               
138
               

               
Alignm E-value:
               
9e-25
               

               
Alignm gaps (pig, cow):
               
53, 10
               

               
Conread position:
               
374-559
               

               
Cow position:
               
chr3:59819908-59820096 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
190
               

               
Alignm identity:
               
133
               

               
Alignm E-value:
               
2e-22
               

               
Alignm gaps (pig, cow):
               
60, 173
               

               
Conread position:
               
375-548
               

               
Cow position:
               
chr3:70319802-70319626 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
180
               

               
Alignm identity:
               
132
               

               
Alignm E-value:
               
8e-24
               

               
Alignm gaps (pig, cow):
               
18, 5
               

               
Conread position:
               
375-562
               

               
Cow position:
               
chr3:79105580-79105384 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
197
               

               
Alignm identity:
               
138
               

               
Alignm E-value:
               
2e-22
               

               
Alignm gaps (pig, cow):
               
53, 0
               

               
Conread position:
               
375-564
               

               
Cow position:
               
chr3:63069363-63069169 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
196
               

               
Alignm identity:
               
153
               

               
Alignm E-value:
               
1e-37
               

               
Alignm gaps (pig, cow):
               
51, 174
               

               
Conread position:
               
375-565
               

               
Cow position:
               
chr3:14211980-14211795 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
193
               

               
Alignm identity:
               
145
               

               
Alignm E-value:
               
2e-29
               

               
Alignm gaps (pig, cow):
               
56, 90
               

               
Conread position:
               
376-530
               

               
Cow position:
               
chr3:67942532-67942374 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
159
               

               
Alignm identity:
               
129
               

               
Alignm E-value:
               
8e-35
               

               
Alignm gaps (pig, cow):
               
52, 0
               

               
Conread position:
               
376-532
               

               
Cow position:
               
chr3:57706754-57706591 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
164
               

               
Alignm identity:
               
123
               

               
Alignm E-value:
               
8e-24
               

               
Alignm gaps (pig, cow):
               
9, 0
               

               
Conread position:
               
376-555
               

               
Cow position:
               
chr3:68289680-68289872 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
193
               

               
Alignm identity:
               
144
               

               
Alignm E-value:
               
1e-27
               

               
Alignm gaps (pig, cow):
               
50, 0
               

               
Conread position:
               
376-565
               

               
Cow position:
               
chr3:75871482-75871673 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
194
               

               
Alignm identity:
               
134
               

               
Alignm E-value:
               
2e-21
               

               
Alignm gaps (pig, cow):
               
52, 171
               

               
Conread position:
               
377-532
               

               
Cow position:
               
chr3:74050697-74050545 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
158
               

               
Alignm identity:
               
120
               

               
Alignm E-value:
               
3e-24
               

               
Alignm gaps (pig, cow):
               
49, 88
               

               
Conread position:
               
377-554
               

               
Cow position:
               
chr3:83455146-83454969 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
180
               

               
Alignm identity:
               
126
               

               
Alignm E-value:
               
2e-21
               

               
Alignm gaps (pig, cow):
               
46, 87
               

               
Conread position:
               
377-556
               

               
Cow position:
               
chr3:55271986-55271810 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
182
               

               
Alignm identity:
               
129
               

               
Alignm E-value:
               
6e-21
               

               
Alignm gaps (pig, cow):
               
53, 30
               

               
Conread position:
               
378-554
               

               
Cow position:
               
chr3:64910090-64909907 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
184
               

               
Alignm identity:
               
133
               

               
Alignm E-value:
               
9e-25
               

               
Alignm gaps (pig, cow):
               
50, 0
               

               
Conread position:
               
379-532
               

               
Cow position:
               
chr3:47417565-47417410 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
156
               

               
Alignm identity:
               
119
               

               
Alignm E-value:
               
4e-28
               

               
Alignm gaps (pig, cow):
               
47, 0
               

               
Conread position:
               
379-549
               

               
Cow position:
               
chr3:43896053-43895885 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
173
               

               
Alignm identity:
               
125
               

               
Alignm E-value:
               
7e-23
               

               
Alignm gaps (pig, cow):
               
47, 84
               

               
Conread position:
               
379-550
               

               
Cow position:
               
chr3:19641066-19641244 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
180
               

               
Alignm identity:
               
134
               

               
Alignm E-value:
               
3e-26
               

               
Alignm gaps (pig, cow):
               
47, 8
               

               
Conread position:
               
380-530
               

               
Cow position:
               
chr3:2538248-2538396 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
154
               

               
Alignm identity:
               
118
               

               
Alignm E-value:
               
8e-24
               

               
Alignm gaps (pig, cow):
               
48, 78
               

               
Conread position:
               
380-541
               

               
Cow position:
               
chr3:49733045-49732880 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
167
               

               
Alignm identity:
               
133
               

               
Alignm E-value:
               
2e-33
               

               
Alignm gaps (pig, cow):
               
80, 50
               

               
Conread position:
               
380-554
               

               
Cow position:
               
chr3:11607830-11608000 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
177
               

               
Alignm identity:
               
136
               

               
Alignm E-value:
               
2e-29
               

               
Alignm gaps (pig, cow):
               
46, 29
               

               
Conread position:
               
380-555
               

               
Cow position:
               
chr3:53249501-53249669 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
178
               

               
Alignm identity:
               
134
               

               
Alignm E-value:
               
3e-26
               

               
Alignm gaps (pig, cow):
               
46, 25
               

               
Conread position:
               
380-559
               

               
Cow position:
               
chr3:20854726-20854536 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
191
               

               
Alignm identity:
               
137
               

               
Alignm E-value:
               
2e-21
               

               
Alignm gaps (pig, cow):
               
25, 0
               

               
Conread position:
               
381-530
               

               
Cow position:
               
chr3:56754524-56754376 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
152
               

               
Alignm identity:
               
123
               

               
Alignm E-value:
               
2e-31
               

               
Alignm gaps (pig, cow):
               
47, 28
               

               
Conread position:
               
382-556
               

               
Cow position:
               
chr3:35079498-35079314 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
185
               

               
Alignm identity:
               
138
               

               
Alignm E-value:
               
3e-26
               

               
Alignm gaps (pig, cow):
               
48, 0
               

               
Conread position:
               
383-524
               

               
Cow position:
               
chr3:28643422-28643564 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
144
               

               
Alignm identity:
               
108
               

               
Alignm E-value:
               
2e-22
               

               
Alignm gaps (pig, cow):
               
45, 74
               

               
Conread position:
               
383-532
               

               
Cow position:
               
chr3:74515327-74515175 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
156
               

               
Alignm identity:
               
126
               

               
Alignm E-value:
               
4e-28
               

               
Alignm gaps (pig, cow):
               
39, 53
               

               
Conread position:
               
383-548
               

               
Cow position:
               
chr3:55106138-55105969 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
170
               

               
Alignm identity:
               
134
               

               
Alignm E-value:
               
3e-34
               

               
Alignm gaps (pig, cow):
               
45, 0
               

               
Conread position:
               
383-551
               

               
Cow position:
               
chr3:11029899-11029723 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
177
               

               
Alignm identity:
               
132
               

               
Alignm E-value:
               
1e-26
               

               
Alignm gaps (pig, cow):
               
45, 0
               

               
Conread position:
               
383-551
               

               
Cow position:
               
chr3:68624228-68624399 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
172
               

               
Alignm identity:
               
135
               

               
Alignm E-value:
               
3e-34
               

               
Alignm gaps (pig, cow):
               
43, 0
               

               
Conread position:
               
383-554
               

               
Cow position:
               
chr3:40958116-40957945 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
174
               

               
Alignm identity:
               
125
               

               
Alignm E-value:
               
8e-24
               

               
Alignm gaps (pig, cow):
               
43, 82
               

               
Conread position:
               
384-532
               

               
Cow position:
               
chr3:10115310-10115456 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
149
               

               
Alignm identity:
               
112
               

               
Alignm E-value:
               
3e-24
               

               
Alignm gaps (pig, cow):
               
76, 0
               

               
Conread position:
               
384-548
               

               
Cow position:
               
chr3:3453591-3453759 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
169
               

               
Alignm identity:
               
135
               

               
Alignm E-value:
               
9e-36
               

               
Alignm gaps (pig, cow):
               
42, 0
               

               
Conread position:
               
384-565
               

               
Cow position:
               
chr3:17331734-17331913 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
184
               

               
Alignm identity:
               
130
               

               
Alignm E-value:
               
6e-22
               

               
Alignm gaps (pig, cow):
               
42, 73
               

               
Conread position:
               
384-605
               

               
Cow position:
               
chr3:66885018-66884793 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
229
               

               
Alignm identity:
               
154
               

               
Alignm E-value:
               
6e-21
               

               
Alignm gaps (pig, cow):
               
32, 80
               

               
Conread position:
               
385-535
               

               
Cow position:
               
chr3:53552967-53552820 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
153
               

               
Alignm identity:
               
114
               

               
Alignm E-value:
               
2e-21
               

               
Alignm gaps (pig, cow):
               
43, 75
               

               
Conread position:
               
385-575
               

               
Cow position:
               
chr3:57790626-57790817 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
199
               

               
Alignm identity:
               
145
               

               
Alignm E-value:
               
7e-23
               

               
Alignm gaps (pig, cow):
               
55, 72
               

               
Conread position:
               
386-587
               

               
Cow position:
               
chr3:49787572-49787769 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
205
               

               
Alignm identity:
               
151
               

               
Alignm E-value:
               
5e-29
               

               
Alignm gaps (pig, cow):
               
42, 84
               

               
Conread position:
               
392-532
               

               
Cow position:
               
chr3:2636910-2636773 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
143
               

               
Alignm identity:
               
113
               

               
Alignm E-value:
               
9e-25
               

               
Alignm gaps (pig, cow):
               
75, 30
               

               
Conread position:
               
392-532
               

               
Cow position:
               
chr3:43016431-43016279 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
153
               

               
Alignm identity:
               
118
               

               
Alignm E-value:
               
2e-22
               

               
Alignm gaps (pig, cow):
               
36, 0
               

               
Conread position:
               
392-535
               

               
Cow position:
               
chr3:621454-621605 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
152
               

               
Alignm identity:
               
120
               

               
Alignm E-value:
               
4e-27
               

               
Alignm gaps (pig, cow):
               
36, 0
               

               
Conread position:
               
392-554
               

               
Cow position:
               
chr3:48537382-48537549 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
168
               

               
Alignm identity:
               
127
               

               
Alignm E-value:
               
1e-27
               

               
Alignm gaps (pig, cow):
               
36, 0
               

               
Conread position:
               
392-566
               

               
Cow position:
               
chr3:33460589-33460399 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
191
               

               
Alignm identity:
               
142
               

               
Alignm E-value:
               
3e-25
               

               
Alignm gaps (pig, cow):
               
36, 0
               

               
Conread position:
               
392-576
               

               
Cow position:
               
chr3:34931781-34931589 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
194
               

               
Alignm identity:
               
142
               

               
Alignm E-value:
               
3e-26
               

               
Alignm gaps (pig, cow):
               
34, 163
               

               
Conread position:
               
393-547
               

               
Cow position:
               
chr3:18764122-18764281 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
160
               

               
Alignm identity:
               
120
               

               
Alignm E-value:
               
3e-24
               

               
Alignm gaps (pig, cow):
               
35, 0
               

               
Conread position:
               
393-547
               

               
Cow position:
               
chr3:22078096-22078254 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
159
               

               
Alignm identity:
               
124
               

               
Alignm E-value:
               
5e-30
               

               
Alignm gaps (pig, cow):
               
33, 0
               

               
Conread position:
               
393-568
               

               
Cow position:
               
chr3:58929514-58929337 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
180
               

               
Alignm identity:
               
136
               

               
Alignm E-value:
               
5e-29
               

               
Alignm gaps (pig, cow):
               
34, 154
               

               
Conread position:
               
394-555
               

               
Cow position:
               
chr3:44218787-44218952 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
166
               

               
Alignm identity:
               
130
               

               
Alignm E-value:
               
2e-32
               

               
Alignm gaps (pig, cow):
               
35, 0
               

               
Conread position:
               
394-556
               

               
Cow position:
               
chr3:58562715-58562886 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
172
               

               
Alignm identity:
               
137
               

               
Alignm E-value:
               
2e-31
               

               
Alignm gaps (pig, cow):
               
19, 0
               

               
Conread position:
               
394-572
               

               
Cow position:
               
chr3:12621356-12621176 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
183
               

               
Alignm identity:
               
130
               

               
Alignm E-value:
               
6e-22
               

               
Alignm gaps (pig, cow):
               
32, 153
               

               
Conread position:
               
399-542
               

               
Cow position:
               
chr3:69849266-69849127 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
146
               

               
Alignm identity:
               
111
               

               
Alignm E-value:
               
2e-21
               

               
Alignm gaps (pig, cow):
               
29, 79
               

               
Conread position:
               
399-553
               

               
Cow position:
               
chr3:73410313-73410464 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
157
               

               
Alignm identity:
               
118
               

               
Alignm E-value:
               
7e-23
               

               
Alignm gaps (pig, cow):
               
63, 32
               

               
Conread position:
               
399-554
               

               
Cow position:
               
chr3:61171342-61171175 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
168
               

               
Alignm identity:
               
128
               

               
Alignm E-value:
               
9e-25
               

               
Alignm gaps (pig, cow):
               
29, 0
               

               
Conread position:
               
399-556
               

               
Cow position:
               
chr3:32690165-32690010 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
160
               

               
Alignm identity:
               
117
               

               
Alignm E-value:
               
2e-21
               

               
Alignm gaps (pig, cow):
               
26, 47
               

               
Conread position:
               
400-532
               

               
Cow position:
               
chr3:34392193-34392064 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
134
               

               
Alignm identity:
               
105
               

               
Alignm E-value:
               
7e-23
               

               
Alignm gaps (pig, cow):
               
26, 64
               

               
Conread position:
               
401-530
               

               
Cow position:
               
chr3:6547452-6547585 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
134
               

               
Alignm identity:
               
111
               

               
Alignm E-value:
               
2e-29
               

               
Alignm gaps (pig, cow):
               
28, 0
               

               
Conread position:
               
402-532
               

               
Cow position:
               
chr3:20888633-20888500 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
134
               

               
Alignm identity:
               
110
               

               
Alignm E-value:
               
5e-29
               

               
Alignm gaps (pig, cow):
               
26, 0
               

               
Conread position:
               
402-555
               

               
Cow position:
               
chr3:78115563-78115407 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
158
               

               
Alignm identity:
               
120
               

               
Alignm E-value:
               
1e-25
               

               
Alignm gaps (pig, cow):
               
24, 145
               

               
Conread position:
               
402-563
               

               
Cow position:
               
chr3:58497687-58497853 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
167
               

               
Alignm identity:
               
124
               

               
Alignm E-value:
               
3e-25
               

               
Alignm gaps (pig, cow):
               
27, 0
               

               
Conread position:
               
405-532
               

               
Cow position:
               
chr3:29943889-29944021 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
133
               

               
Alignm identity:
               
104
               

               
Alignm E-value:
               
2e-22
               

               
Alignm gaps (pig, cow):
               
21, 0
               

               
Conread position:
               
405-553
               

               
Cow position:
               
chr3:53836674-53836527 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
152
               

               
Alignm identity:
               
114
               

               
Alignm E-value:
               
6e-21
               

               
Alignm gaps (pig, cow):
               
25, 57
               

               
Conread position:
               
406-547
               

               
Cow position:
               
chr3:18301537-18301392 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
146
               

               
Alignm identity:
               
109
               

               
Alignm E-value:
               
2e-21
               

               
Alignm gaps (pig, cow):
               
22, 0
               

               
Conread position:
               
406-574
               

               
Cow position:
               
chr3:25289878-25290042 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
171
               

               
Alignm identity:
               
129
               

               
Alignm E-value:
               
1e-25
               

               
Alignm gaps (pig, cow):
               
20, 59
               

               
Conread position:
               
409-574
               

               
Cow position:
               
chr3:7408472-7408646 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
175
               

               
Alignm identity:
               
131
               

               
Alignm E-value:
               
1e-25
               

               
Alignm gaps (pig, cow):
               
19, 0
               

               
Conread position:
               
414-530
               

               
Cow position:
               
chr3:72626704-72626583 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
122
               

               
Alignm identity:
               
104
               

               
Alignm E-value:
               
4e-28
               

               
Alignm gaps (pig, cow):
               
14, 0
               

               
Conread position:
               
414-562
               

               
Cow position:
               
chr3:55973036-55972893 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
151
               

               
Alignm identity:
               
116
               

               
Alignm E-value:
               
2e-21
               

               
Alignm gaps (pig, cow):
               
13, 51
               

               
Conread position:
               
422-556
               

               
Cow position:
               
chr3:70632196-70632333 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
138
               

               
Alignm identity:
               
109
               

               
Alignm E-value:
               
3e-26
               

               
Alignm gaps (pig, cow):
               
40, 0
               

               
Conread position:
               
422-556
               

               
Cow position:
               
chr3:79316740-79316883 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
144
               

               
Alignm identity:
               
112
               

               
Alignm E-value:
               
2e-22
               

               
Alignm gaps (pig, cow):
               
40, 0
               

               
Conread position:
               
422-596
               

               
Cow position:
               
chr3:42933532-42933703 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
177
               

               
Alignm identity:
               
138
               

               
Alignm E-value:
               
2e-32
               

               
Alignm gaps (pig, cow):
               
40, 136
               

               
Conread position:
               
425-542
               

               
Cow position:
               
chr3:72649936-72649815 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
122
               

               
Alignm identity:
               
99
               

               
Alignm E-value:
               
2e-23
               

               
Alignm gaps (pig, cow):
               
27, 0
               

               
Conread position:
               
425-556
               

               
Cow position:
               
chr3:79877081-79877220 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
140
               

               
Alignm identity:
               
110
               

               
Alignm E-value:
               
7e-23
               

               
Alignm gaps (pig, cow):
               
27, 0
               

               
Conread position:
               
425-561
               

               
Cow position:
               
chr3:82121577-82121437 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
141
               

               
Alignm identity:
               
107
               

               
Alignm E-value:
               
2e-21
               

               
Alignm gaps (pig, cow):
               
35, 0
               

               
Conread position:
               
427-542
               

               
Cow position:
               
chr3:66563839-66563956 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
118
               

               
Alignm identity:
               
98
               

               
Alignm E-value:
               
3e-26
               

               
Alignm gaps (pig, cow):
               
35, 0
               

               
Conread position:
               
430-554
               

               
Cow position:
               
chr3:2434678-2434555 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
125
               

               
Alignm identity:
               
97
               

               
Alignm E-value:
               
2e-22
               

               
Alignm gaps (pig, cow):
               
97, 0
               

               
Conread position:
               
430-576
               

               
Cow position:
               
chr3:59926689-59926833 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
150
               

               
Alignm identity:
               
116
               

               
Alignm E-value:
               
3e-24
               

               
Alignm gaps (pig, cow):
               
31, 117
               

               
Conread position:
               
431-554
               

               
Cow position:
               
chr3:44415513-44415389 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
126
               

               
Alignm identity:
               
98
               

               
Alignm E-value:
               
2e-21
               

               
Alignm gaps (pig, cow):
               
31, 114
               

               
Conread position:
               
435-542
               

               
Cow position:
               
chr3:52147379-52147270 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
112
               

               
Alignm identity:
               
94
               

               
Alignm E-value:
               
2e-22
               

               
Alignm gaps (pig, cow):
               
27, 62
               

               
Conread position:
               
436-549
               

               
Cow position:
               
chr3:14558823-14558938 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
116
               

               
Alignm identity:
               
98
               

               
Alignm E-value:
               
4e-27
               

               
Alignm gaps (pig, cow):
               
22, 0
               

               
Conread position:
               
439-555
               

               
Cow position:
               
chr3:59997819-59997944 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
126
               

               
Alignm identity:
               
102
               

               
Alignm E-value:
               
2e-21
               

               
Alignm gaps (pig, cow):
               
17, 0
               

               
Conread position:
               
444-559
               

               
Cow position:
               
chr3:29385940-29386058 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
119
               

               
Alignm identity:
               
98
               

               
Alignm E-value:
               
9e-25
               

               
Alignm gaps (pig, cow):
               
16, 0
               
Show alignments to all cow chromosomes.