Cow genome map

Conread name: Utr1-UTR01H020100

Conread position: 1-141
Cow position:
Alignm length: 143
Alignm identity: 109
Alignm E-value: 7e-22
Alignm gaps (pig, cow): 93, 12

Conread position: 1-157
Cow position:
Alignm length: 159
Alignm identity: 119
Alignm E-value: 1e-25
Alignm gaps (pig, cow): 94, 122

Conread position: 1-157
Cow position:
Alignm length: 159
Alignm identity: 118
Alignm E-value: 7e-21
Alignm gaps (pig, cow): 94, 38

Conread position: 1-189
Cow position:
Alignm length: 203
Alignm identity: 151
Alignm E-value: 2e-28
Alignm gaps (pig, cow): 94, 0

Conread position: 1-209
Cow position:
Alignm length: 223
Alignm identity: 169
Alignm E-value: 4e-36
Alignm gaps (pig, cow): 94, 0

Conread position: 1-215
Cow position:
Alignm length: 229
Alignm identity: 171
Alignm E-value: 3e-35
Alignm gaps (pig, cow): 94, 0

Conread position: 1-224
Cow position:
Alignm length: 239
Alignm identity: 180
Alignm E-value: 1e-38
Alignm gaps (pig, cow): 95, 122

Conread position: 1-264
Cow position:
Alignm length: 280
Alignm identity: 196
Alignm E-value: 2e-31
Alignm gaps (pig, cow): 97, 121

Conread position: 1-273
Cow position:
Alignm length: 288
Alignm identity: 210
Alignm E-value: 5e-39
Alignm gaps (pig, cow): 94, 155

Conread position: 1-321
Cow position:
Alignm length: 335
Alignm identity: 248
Alignm E-value: 0
Alignm gaps (pig, cow): 95, 242

Conread position: 1-353
Cow position:
Alignm length: 369
Alignm identity: 270
Alignm E-value: 0
Alignm gaps (pig, cow): 94, 243

Conread position: 1-358
Cow position:
Alignm length: 373
Alignm identity: 279
Alignm E-value: 0
Alignm gaps (pig, cow): 97, 242

Conread position: 1-377
Cow position:
Alignm length: 393
Alignm identity: 288
Alignm E-value: 0
Alignm gaps (pig, cow): 94, 246

Conread position: 1-399
Cow position:
Alignm length: 418
Alignm identity: 309
Alignm E-value: 0
Alignm gaps (pig, cow): 94, 193

Conread position: 1-399
Cow position:
Alignm length: 416
Alignm identity: 307
Alignm E-value: 0
Alignm gaps (pig, cow): 94, 243

Conread position: 1-404
Cow position:
Alignm length: 422
Alignm identity: 306
Alignm E-value: 0
Alignm gaps (pig, cow): 94, 243

Conread position: 1-406
Cow position:
Alignm length: 421
Alignm identity: 305
Alignm E-value: 0
Alignm gaps (pig, cow): 94, 242

Conread position: 1-410
Cow position:
Alignm length: 437
Alignm identity: 320
Alignm E-value: 0
Alignm gaps (pig, cow): 97, 124

Conread position: 1-444
Cow position:
Alignm length: 464
Alignm identity: 335
Alignm E-value: 0
Alignm gaps (pig, cow): 94, 245

Conread position: 1-477
Cow position:
Alignm length: 494
Alignm identity: 331
Alignm E-value: 0
Alignm gaps (pig, cow): 94, 243

Conread position: 1-527
Cow position:
Alignm length: 546
Alignm identity: 394
Alignm E-value: 0
Alignm gaps (pig, cow): 79, 122

Conread position: 1-532
Cow position:
Alignm length: 547
Alignm identity: 388
Alignm E-value: 0
Alignm gaps (pig, cow): 94, 31

Conread position: 1-573
Cow position:
Alignm length: 582
Alignm identity: 386
Alignm E-value: 0
Alignm gaps (pig, cow): 34, 41

Conread position: 1-613
Cow position:
Alignm length: 629
Alignm identity: 448
Alignm E-value: 0
Alignm gaps (pig, cow): 97, 242

Conread position: 1-621
Cow position:
Alignm length: 649
Alignm identity: 469
Alignm E-value: 0
Alignm gaps (pig, cow): 8, 246

Conread position: 1-644
Cow position:
Alignm length: 669
Alignm identity: 484
Alignm E-value: 0
Alignm gaps (pig, cow): 94, 243

Conread position: 1-689
Cow position:
Alignm length: 710
Alignm identity: 456
Alignm E-value: 0
Alignm gaps (pig, cow): 97, 81

Conread position: 1-697
Cow position:
Alignm length: 714
Alignm identity: 513
Alignm E-value: 0
Alignm gaps (pig, cow): 94, 243

Conread position: 1-697
Cow position:
Alignm length: 723
Alignm identity: 471
Alignm E-value: 0
Alignm gaps (pig, cow): 73, 81

Conread position: 1-697
Cow position:
Alignm length: 718
Alignm identity: 509
Alignm E-value: 0
Alignm gaps (pig, cow): 94, 244

Conread position: 1-697
Cow position:
Alignm length: 728
Alignm identity: 522
Alignm E-value: 0
Alignm gaps (pig, cow): 97, 245

Conread position: 1-697
Cow position:
Alignm length: 715
Alignm identity: 511
Alignm E-value: 0
Alignm gaps (pig, cow): 94, 155

Conread position: 1-697
Cow position:
Alignm length: 714
Alignm identity: 506
Alignm E-value: 0
Alignm gaps (pig, cow): 94, 398

Conread position: 1-697
Cow position:
Alignm length: 733
Alignm identity: 505
Alignm E-value: 0
Alignm gaps (pig, cow): 97, 175

Conread position: 1-697
Cow position:
Alignm length: 719
Alignm identity: 505
Alignm E-value: 0
Alignm gaps (pig, cow): 94, 246

Conread position: 1-697
Cow position:
Alignm length: 711
Alignm identity: 493
Alignm E-value: 0
Alignm gaps (pig, cow): 331, 98

Conread position: 1-697
Cow position:
Alignm length: 732
Alignm identity: 529
Alignm E-value: 0
Alignm gaps (pig, cow): 97, 245

Conread position: 1-697
Cow position:
Alignm length: 716
Alignm identity: 514
Alignm E-value: 0
Alignm gaps (pig, cow): 94, 243

Conread position: 1-697
Cow position:
Alignm length: 730
Alignm identity: 525
Alignm E-value: 0
Alignm gaps (pig, cow): 18, 91

Conread position: 1-697
Cow position:
Alignm length: 723
Alignm identity: 531
Alignm E-value: 0
Alignm gaps (pig, cow): 97, 405

Conread position: 1-697
Cow position:
Alignm length: 712
Alignm identity: 511
Alignm E-value: 0
Alignm gaps (pig, cow): 94, 121

Conread position: 1-697
Cow position:
Alignm length: 716
Alignm identity: 523
Alignm E-value: 0
Alignm gaps (pig, cow): 96, 243

Conread position: 1-697
Cow position:
Alignm length: 738
Alignm identity: 524
Alignm E-value: 0
Alignm gaps (pig, cow): 95, 260

Conread position: 1-698
Cow position:
Alignm length: 711
Alignm identity: 507
Alignm E-value: 0
Alignm gaps (pig, cow): 40, 26

Conread position: 1-705
Cow position:
Alignm length: 727
Alignm identity: 533
Alignm E-value: 0
Alignm gaps (pig, cow): 94, 220

Conread position: 1-705
Cow position:
Alignm length: 722
Alignm identity: 524
Alignm E-value: 0
Alignm gaps (pig, cow): 96, 124

Conread position: 1-705
Cow position:
Alignm length: 720
Alignm identity: 501
Alignm E-value: 0
Alignm gaps (pig, cow): 94, 241

Conread position: 1-705
Cow position:
Alignm length: 714
Alignm identity: 523
Alignm E-value: 0
Alignm gaps (pig, cow): 141, 96

Conread position: 1-706
Cow position:
Alignm length: 735
Alignm identity: 539
Alignm E-value: 0
Alignm gaps (pig, cow): 97, 245

Conread position: 2-657
Cow position:
Alignm length: 673
Alignm identity: 493
Alignm E-value: 0
Alignm gaps (pig, cow): 96, 243

Conread position: 2-702
Cow position:
Alignm length: 724
Alignm identity: 499
Alignm E-value: 0
Alignm gaps (pig, cow): 14, 37

Conread position: 2-705
Cow position:
Alignm length: 731
Alignm identity: 520
Alignm E-value: 0
Alignm gaps (pig, cow): 93, 123

Conread position: 3-238
Cow position:
Alignm length: 239
Alignm identity: 179
Alignm E-value: 2e-40
Alignm gaps (pig, cow): 92, 119

Conread position: 3-318
Cow position:
Alignm length: 332
Alignm identity: 241
Alignm E-value: 0
Alignm gaps (pig, cow): 95, 120

Conread position: 3-389
Cow position:
Alignm length: 419
Alignm identity: 295
Alignm E-value: 0
Alignm gaps (pig, cow): 94, 188

Conread position: 3-411
Cow position:
Alignm length: 419
Alignm identity: 301
Alignm E-value: 0
Alignm gaps (pig, cow): 92, 233

Conread position: 3-413
Cow position:
Alignm length: 428
Alignm identity: 312
Alignm E-value: 0
Alignm gaps (pig, cow): 92, 120

Conread position: 3-502
Cow position:
Alignm length: 519
Alignm identity: 373
Alignm E-value: 0
Alignm gaps (pig, cow): 92, 122

Conread position: 3-532
Cow position:
Alignm length: 549
Alignm identity: 379
Alignm E-value: 0
Alignm gaps (pig, cow): 92, 403

Conread position: 3-658
Cow position:
Alignm length: 689
Alignm identity: 500
Alignm E-value: 0
Alignm gaps (pig, cow): 37, 72

Conread position: 3-670
Cow position:
Alignm length: 696
Alignm identity: 461
Alignm E-value: 0
Alignm gaps (pig, cow): 93, 54

Conread position: 3-697
Cow position:
Alignm length: 712
Alignm identity: 519
Alignm E-value: 0
Alignm gaps (pig, cow): 92, 119

Conread position: 3-697
Cow position:
Alignm length: 712
Alignm identity: 533
Alignm E-value: 0
Alignm gaps (pig, cow): 95, 123

Conread position: 3-697
Cow position:
Alignm length: 713
Alignm identity: 523
Alignm E-value: 0
Alignm gaps (pig, cow): 92, 120

Conread position: 3-701
Cow position:
Alignm length: 718
Alignm identity: 526
Alignm E-value: 0
Alignm gaps (pig, cow): 92, 242

Conread position: 3-701
Cow position:
Alignm length: 750
Alignm identity: 546
Alignm E-value: 0
Alignm gaps (pig, cow): 95, 120

Conread position: 3-701
Cow position:
Alignm length: 714
Alignm identity: 529
Alignm E-value: 0
Alignm gaps (pig, cow): 92, 238

Conread position: 3-701
Cow position:
Alignm length: 713
Alignm identity: 521
Alignm E-value: 0
Alignm gaps (pig, cow): 92, 123

Conread position: 3-701
Cow position:
Alignm length: 717
Alignm identity: 539
Alignm E-value: 0
Alignm gaps (pig, cow): 95, 120

Conread position: 3-701
Cow position:
Alignm length: 732
Alignm identity: 543
Alignm E-value: 0
Alignm gaps (pig, cow): 95, 122

Conread position: 3-703
Cow position:
Alignm length: 726
Alignm identity: 533
Alignm E-value: 0
Alignm gaps (pig, cow): 92, 138

Conread position: 3-704
Cow position:
Alignm length: 720
Alignm identity: 543
Alignm E-value: 0
Alignm gaps (pig, cow): 92, 120

Conread position: 3-704
Cow position:
Alignm length: 725
Alignm identity: 532
Alignm E-value: 0
Alignm gaps (pig, cow): 92, 173

Conread position: 3-704
Cow position:
Alignm length: 731
Alignm identity: 542
Alignm E-value: 0
Alignm gaps (pig, cow): 92, 120

Conread position: 3-704
Cow position:
Alignm length: 725
Alignm identity: 544
Alignm E-value: 0
Alignm gaps (pig, cow): 94, 120

Conread position: 3-705
Cow position:
Alignm length: 724
Alignm identity: 534
Alignm E-value: 0
Alignm gaps (pig, cow): 92, 120

Conread position: 3-705
Cow position:
Alignm length: 730
Alignm identity: 528
Alignm E-value: 0
Alignm gaps (pig, cow): 95, 245

Conread position: 3-705
Cow position:
Alignm length: 724
Alignm identity: 509
Alignm E-value: 0
Alignm gaps (pig, cow): 58, 122

Conread position: 3-705
Cow position:
Alignm length: 739
Alignm identity: 533
Alignm E-value: 0
Alignm gaps (pig, cow): 92, 120

Conread position: 3-705
Cow position:
Alignm length: 717
Alignm identity: 519
Alignm E-value: 0
Alignm gaps (pig, cow): 56, 62

Conread position: 3-705
Cow position:
Alignm length: 722
Alignm identity: 535
Alignm E-value: 0
Alignm gaps (pig, cow): 140, 94

Conread position: 3-705
Cow position:
Alignm length: 722
Alignm identity: 515
Alignm E-value: 0
Alignm gaps (pig, cow): 92, 204

Conread position: 3-705
Cow position:
Alignm length: 746
Alignm identity: 542
Alignm E-value: 0
Alignm gaps (pig, cow): 93, 122

Conread position: 3-705
Cow position:
Alignm length: 720
Alignm identity: 518
Alignm E-value: 0
Alignm gaps (pig, cow): 92, 120

Conread position: 3-706
Cow position:
Alignm length: 719
Alignm identity: 533
Alignm E-value: 0
Alignm gaps (pig, cow): 95, 122

Conread position: 3-707
Cow position:
Alignm length: 726
Alignm identity: 518
Alignm E-value: 0
Alignm gaps (pig, cow): 92, 120

Conread position: 4-621
Cow position:
Alignm length: 634
Alignm identity: 454
Alignm E-value: 0
Alignm gaps (pig, cow): 94, 121

Conread position: 4-705
Cow position:
Alignm length: 721
Alignm identity: 522
Alignm E-value: 0
Alignm gaps (pig, cow): 91, 119

Conread position: 5-691
Cow position:
Alignm length: 720
Alignm identity: 479
Alignm E-value: 0
Alignm gaps (pig, cow): 91, 120

Conread position: 5-705
Cow position:
Alignm length: 725
Alignm identity: 517
Alignm E-value: 0
Alignm gaps (pig, cow): 90, 120

Conread position: 5-705
Cow position:
Alignm length: 747
Alignm identity: 524
Alignm E-value: 0
Alignm gaps (pig, cow): 90, 117

Conread position: 6-705
Cow position:
Alignm length: 727
Alignm identity: 520
Alignm E-value: 0
Alignm gaps (pig, cow): 92, 116

Conread position: 8-506
Cow position:
Alignm length: 515
Alignm identity: 371
Alignm E-value: 0
Alignm gaps (pig, cow): 87, 232

Conread position: 8-705
Cow position:
Alignm length: 739
Alignm identity: 527
Alignm E-value: 0
Alignm gaps (pig, cow): 87, 115

Conread position: 9-559
Cow position:
Alignm length: 568
Alignm identity: 395
Alignm E-value: 0
Alignm gaps (pig, cow): 83, 115

Conread position: 9-701
Cow position:
Alignm length: 713
Alignm identity: 517
Alignm E-value: 0
Alignm gaps (pig, cow): 86, 244

Conread position: 9-705
Cow position:
Alignm length: 743
Alignm identity: 533
Alignm E-value: 0
Alignm gaps (pig, cow): 86, 114

Conread position: 14-697
Cow position:
Alignm length: 707
Alignm identity: 500
Alignm E-value: 0
Alignm gaps (pig, cow): 84, 207

Conread position: 15-697
Cow position:
Alignm length: 708
Alignm identity: 512
Alignm E-value: 0
Alignm gaps (pig, cow): 80, 17

Conread position: 16-582
Cow position:
Alignm length: 584
Alignm identity: 375
Alignm E-value: 0
Alignm gaps (pig, cow): 79, 97

Conread position: 17-705
Cow position:
Alignm length: 698
Alignm identity: 511
Alignm E-value: 0
Alignm gaps (pig, cow): 78, 106

Conread position: 22-529
Cow position:
Alignm length: 537
Alignm identity: 396
Alignm E-value: 0
Alignm gaps (pig, cow): 37, 78

Conread position: 80-705
Cow position:
Alignm length: 650
Alignm identity: 472
Alignm E-value: 0
Alignm gaps (pig, cow): 15, 136

Conread position: 87-705
Cow position:
Alignm length: 635
Alignm identity: 452
Alignm E-value: 0
Alignm gaps (pig, cow): 12, 29

Conread position: 134-705
Cow position:
Alignm length: 587
Alignm identity: 424
Alignm E-value: 0
Alignm gaps (pig, cow): 92, 60

Conread position: 138-634
Cow position:
Alignm length: 513
Alignm identity: 384
Alignm E-value: 0
Alignm gaps (pig, cow): 88, 96

Conread position: 167-582
Cow position:
Alignm length: 418
Alignm identity: 300
Alignm E-value: 0
Alignm gaps (pig, cow): 58, 70

Conread position: 232-705
Cow position:
Alignm length: 487
Alignm identity: 359
Alignm E-value: 0
Alignm gaps (pig, cow): 100, 160

Conread position: 249-697
Cow position:
Alignm length: 462
Alignm identity: 342
Alignm E-value: 0
Alignm gaps (pig, cow): 83, 99

Conread position: 288-705
Cow position:
Alignm length: 424
Alignm identity: 292
Alignm E-value: 0
Alignm gaps (pig, cow): 44, 82

Conread position: 297-693
Cow position:
Alignm length: 409
Alignm identity: 299
Alignm E-value: 0
Alignm gaps (pig, cow): 23, 62

Conread position: 385-705
Cow position:
Alignm length: 326
Alignm identity: 240
Alignm E-value: 8.40779e-45
Alignm gaps (pig, cow): 68, 39

Conread position: 388-705
Cow position:
Alignm length: 320
Alignm identity: 229
Alignm E-value: 8.00141e-43
Alignm gaps (pig, cow): 28, 79

Conread position: 389-697
Cow position:
Alignm length: 323
Alignm identity: 235
Alignm E-value: 1.99965e-42
Alignm gaps (pig, cow): 104, 27

Conread position: 399-704
Cow position:
Alignm length: 323
Alignm identity: 241
Alignm E-value: 0
Alignm gaps (pig, cow): 51, 17

Conread position: 399-705
Cow position:
Alignm length: 320
Alignm identity: 247
Alignm E-value: 0
Alignm gaps (pig, cow): 63, 17

Show alignments to all cow chromosomes.