Cow genome map
| Conread name: | Utr1-UTR01H020100 |
| Conread position: | 1-141 |
| Cow position: | chr10:6092-6235 (view UCSC Genome Browser custom track) |
| Alignm length: | 145 |
| Alignm identity: | 118 |
| Alignm E-value: | 4e-30 |
| Alignm gaps (pig, cow): | 24, 123 |
| Conread position: | 1-157 |
| Cow position: | chr10:5848932-5848775 (view UCSC Genome Browser custom track) |
| Alignm length: | 159 |
| Alignm identity: | 120 |
| Alignm E-value: | 9e-27 |
| Alignm gaps (pig, cow): | 94, 122 |
| Conread position: | 1-157 |
| Cow position: | chr10:9593262-9593106 (view UCSC Genome Browser custom track) |
| Alignm length: | 159 |
| Alignm identity: | 122 |
| Alignm E-value: | 9e-28 |
| Alignm gaps (pig, cow): | 84, 95 |
| Conread position: | 1-157 |
| Cow position: | chr10:49991136-49991292 (view UCSC Genome Browser custom track) |
| Alignm length: | 159 |
| Alignm identity: | 121 |
| Alignm E-value: | 9e-27 |
| Alignm gaps (pig, cow): | 94, 122 |
| Conread position: | 1-157 |
| Cow position: | chr10:56065368-56065525 (view UCSC Genome Browser custom track) |
| Alignm length: | 159 |
| Alignm identity: | 122 |
| Alignm E-value: | 1e-28 |
| Alignm gaps (pig, cow): | 94, 122 |
| Conread position: | 1-358 |
| Cow position: | chr10:21731152-21730781 (view UCSC Genome Browser custom track) |
| Alignm length: | 375 |
| Alignm identity: | 279 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 94, 107 |
| Conread position: | 1-360 |
| Cow position: | chr10:29632072-29631699 (view UCSC Genome Browser custom track) |
| Alignm length: | 375 |
| Alignm identity: | 283 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 94, 242 |
| Conread position: | 1-382 |
| Cow position: | chr10:39815844-39815447 (view UCSC Genome Browser custom track) |
| Alignm length: | 399 |
| Alignm identity: | 295 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 94, 243 |
| Conread position: | 1-391 |
| Cow position: | chr10:11698938-11699343 (view UCSC Genome Browser custom track) |
| Alignm length: | 407 |
| Alignm identity: | 307 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 94, 245 |
| Conread position: | 1-414 |
| Cow position: | chr10:26597310-26597736 (view UCSC Genome Browser custom track) |
| Alignm length: | 431 |
| Alignm identity: | 324 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 92, 105 |
| Conread position: | 1-551 |
| Cow position: | chr10:34285952-34286508 (view UCSC Genome Browser custom track) |
| Alignm length: | 569 |
| Alignm identity: | 406 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 94, 243 |
| Conread position: | 1-564 |
| Cow position: | chr10:28929259-28928703 (view UCSC Genome Browser custom track) |
| Alignm length: | 583 |
| Alignm identity: | 400 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 93, 45 |
| Conread position: | 1-611 |
| Cow position: | chr10:21480619-21481240 (view UCSC Genome Browser custom track) |
| Alignm length: | 648 |
| Alignm identity: | 443 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 98, 259 |
| Conread position: | 1-696 |
| Cow position: | chr10:42749530-42750211 (view UCSC Genome Browser custom track) |
| Alignm length: | 721 |
| Alignm identity: | 493 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 95, 123 |
| Conread position: | 1-697 |
| Cow position: | chr10:14804529-14805239 (view UCSC Genome Browser custom track) |
| Alignm length: | 734 |
| Alignm identity: | 527 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 97, 240 |
| Conread position: | 1-697 |
| Cow position: | chr10:19495584-19494896 (view UCSC Genome Browser custom track) |
| Alignm length: | 714 |
| Alignm identity: | 513 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 94, 80 |
| Conread position: | 1-697 |
| Cow position: | chr10:19840376-19841072 (view UCSC Genome Browser custom track) |
| Alignm length: | 712 |
| Alignm identity: | 510 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 94, 242 |
| Conread position: | 1-697 |
| Cow position: | chr10:21399976-21399290 (view UCSC Genome Browser custom track) |
| Alignm length: | 714 |
| Alignm identity: | 519 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 94, 175 |
| Conread position: | 1-697 |
| Cow position: | chr10:28642228-28642933 (view UCSC Genome Browser custom track) |
| Alignm length: | 717 |
| Alignm identity: | 510 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 94, 243 |
| Conread position: | 1-697 |
| Cow position: | chr10:39180485-39181189 (view UCSC Genome Browser custom track) |
| Alignm length: | 722 |
| Alignm identity: | 521 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 97, 44 |
| Conread position: | 1-697 |
| Cow position: | chr10:41567794-41568494 (view UCSC Genome Browser custom track) |
| Alignm length: | 715 |
| Alignm identity: | 518 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 94, 243 |
| Conread position: | 1-697 |
| Cow position: | chr10:47907625-47908327 (view UCSC Genome Browser custom track) |
| Alignm length: | 725 |
| Alignm identity: | 535 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 97, 243 |
| Conread position: | 1-697 |
| Cow position: | chr10:57556645-57555942 (view UCSC Genome Browser custom track) |
| Alignm length: | 718 |
| Alignm identity: | 519 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 94, 230 |
| Conread position: | 1-704 |
| Cow position: | chr10:40151551-40150856 (view UCSC Genome Browser custom track) |
| Alignm length: | 723 |
| Alignm identity: | 525 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 53, 125 |
| Conread position: | 1-704 |
| Cow position: | chr10:50135255-50135969 (view UCSC Genome Browser custom track) |
| Alignm length: | 735 |
| Alignm identity: | 543 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 70, 125 |
| Conread position: | 1-705 |
| Cow position: | chr10:279913-279206 (view UCSC Genome Browser custom track) |
| Alignm length: | 731 |
| Alignm identity: | 545 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 97, 240 |
| Conread position: | 1-705 |
| Cow position: | chr10:11684951-11684230 (view UCSC Genome Browser custom track) |
| Alignm length: | 727 |
| Alignm identity: | 521 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 94, 243 |
| Conread position: | 1-705 |
| Cow position: | chr10:55093961-55094668 (view UCSC Genome Browser custom track) |
| Alignm length: | 734 |
| Alignm identity: | 533 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 97, 245 |
| Conread position: | 3-157 |
| Cow position: | chr10:19714868-19714713 (view UCSC Genome Browser custom track) |
| Alignm length: | 157 |
| Alignm identity: | 123 |
| Alignm E-value: | 4e-30 |
| Alignm gaps (pig, cow): | 95, 120 |
| Conread position: | 3-390 |
| Cow position: | chr10:21487618-21488016 (view UCSC Genome Browser custom track) |
| Alignm length: | 404 |
| Alignm identity: | 297 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 92, 120 |
| Conread position: | 3-396 |
| Cow position: | chr10:125089-125496 (view UCSC Genome Browser custom track) |
| Alignm length: | 410 |
| Alignm identity: | 307 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 92, 242 |
| Conread position: | 3-676 |
| Cow position: | chr10:38537800-38537125 (view UCSC Genome Browser custom track) |
| Alignm length: | 703 |
| Alignm identity: | 509 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 95, 122 |
| Conread position: | 3-688 |
| Cow position: | chr10:38344663-38343978 (view UCSC Genome Browser custom track) |
| Alignm length: | 706 |
| Alignm identity: | 518 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 92, 120 |
| Conread position: | 3-697 |
| Cow position: | chr10:14335152-14334442 (view UCSC Genome Browser custom track) |
| Alignm length: | 725 |
| Alignm identity: | 538 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 92, 120 |
| Conread position: | 3-697 |
| Cow position: | chr10:29845947-29845253 (view UCSC Genome Browser custom track) |
| Alignm length: | 713 |
| Alignm identity: | 531 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 92, 67 |
| Conread position: | 3-705 |
| Cow position: | chr10:2120314-2119600 (view UCSC Genome Browser custom track) |
| Alignm length: | 733 |
| Alignm identity: | 533 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 95, 105 |
| Conread position: | 3-705 |
| Cow position: | chr10:7281391-7280704 (view UCSC Genome Browser custom track) |
| Alignm length: | 721 |
| Alignm identity: | 527 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 92, 120 |
| Conread position: | 3-705 |
| Cow position: | chr10:22101935-22102639 (view UCSC Genome Browser custom track) |
| Alignm length: | 721 |
| Alignm identity: | 528 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 92, 120 |
| Conread position: | 3-705 |
| Cow position: | chr10:30684816-30684091 (view UCSC Genome Browser custom track) |
| Alignm length: | 732 |
| Alignm identity: | 543 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 92, 241 |
| Conread position: | 3-705 |
| Cow position: | chr10:39040607-39039894 (view UCSC Genome Browser custom track) |
| Alignm length: | 734 |
| Alignm identity: | 531 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 92, 71 |
| Conread position: | 3-705 |
| Cow position: | chr10:41877614-41878324 (view UCSC Genome Browser custom track) |
| Alignm length: | 720 |
| Alignm identity: | 516 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 92, 240 |
| Conread position: | 3-705 |
| Cow position: | chr10:57989293-57988593 (view UCSC Genome Browser custom track) |
| Alignm length: | 731 |
| Alignm identity: | 531 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 95, 119 |
| Conread position: | 4-471 |
| Cow position: | chr10:8290676-8291146 (view UCSC Genome Browser custom track) |
| Alignm length: | 485 |
| Alignm identity: | 363 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 91, 241 |
| Conread position: | 5-697 |
| Cow position: | chr10:16926235-16926929 (view UCSC Genome Browser custom track) |
| Alignm length: | 724 |
| Alignm identity: | 529 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 93, 77 |
| Conread position: | 5-701 |
| Cow position: | chr10:19512309-19512974 (view UCSC Genome Browser custom track) |
| Alignm length: | 702 |
| Alignm identity: | 506 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 90, 118 |
| Conread position: | 7-697 |
| Cow position: | chr10:41158142-41158831 (view UCSC Genome Browser custom track) |
| Alignm length: | 713 |
| Alignm identity: | 505 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 91, 237 |
| Conread position: | 15-706 |
| Cow position: | chr10:24311639-24310967 (view UCSC Genome Browser custom track) |
| Alignm length: | 710 |
| Alignm identity: | 472 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 67, 99 |
| Conread position: | 22-705 |
| Cow position: | chr10:1378222-1378901 (view UCSC Genome Browser custom track) |
| Alignm length: | 709 |
| Alignm identity: | 528 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 76, 100 |
| Conread position: | 22-705 |
| Cow position: | chr10:8326590-8325951 (view UCSC Genome Browser custom track) |
| Alignm length: | 692 |
| Alignm identity: | 468 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 75, 95 |
| Conread position: | 27-358 |
| Cow position: | chr10:7274492-7274838 (view UCSC Genome Browser custom track) |
| Alignm length: | 348 |
| Alignm identity: | 256 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 68, 217 |
| Conread position: | 35-706 |
| Cow position: | chr10:11821491-11822149 (view UCSC Genome Browser custom track) |
| Alignm length: | 686 |
| Alignm identity: | 470 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 94, 22 |
| Conread position: | 40-413 |
| Cow position: | chr10:48398549-48398176 (view UCSC Genome Browser custom track) |
| Alignm length: | 388 |
| Alignm identity: | 254 |
| Alignm E-value: | 2e-25 |
| Alignm gaps (pig, cow): | 58, 34 |
| Conread position: | 57-697 |
| Cow position: | chr10:1665782-1665138 (view UCSC Genome Browser custom track) |
| Alignm length: | 668 |
| Alignm identity: | 477 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 41, 68 |
| Conread position: | 73-701 |
| Cow position: | chr10:32701497-32702124 (view UCSC Genome Browser custom track) |
| Alignm length: | 654 |
| Alignm identity: | 483 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 25, 50 |
| Conread position: | 94-705 |
| Cow position: | chr10:57501621-57502208 (view UCSC Genome Browser custom track) |
| Alignm length: | 617 |
| Alignm identity: | 441 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 41, 30 |
| Conread position: | 95-579 |
| Cow position: | chr10:3542259-3541798 (view UCSC Genome Browser custom track) |
| Alignm length: | 488 |
| Alignm identity: | 342 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 237, 29 |
| Conread position: | 137-704 |
| Cow position: | chr10:186935-187482 (view UCSC Genome Browser custom track) |
| Alignm length: | 587 |
| Alignm identity: | 390 |
| Alignm E-value: | 2.00386e-43 |
| Alignm gaps (pig, cow): | 71, 108 |
| Conread position: | 143-698 |
| Cow position: | chr10:29110290-29109756 (view UCSC Genome Browser custom track) |
| Alignm length: | 562 |
| Alignm identity: | 405 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 83, 91 |
| Conread position: | 195-696 |
| Cow position: | chr10:58097114-58096636 (view UCSC Genome Browser custom track) |
| Alignm length: | 505 |
| Alignm identity: | 340 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 30, 37 |
| Conread position: | 219-461 |
| Cow position: | chr10:39439292-39439513 (view UCSC Genome Browser custom track) |
| Alignm length: | 245 |
| Alignm identity: | 176 |
| Alignm E-value: | 2e-25 |
| Alignm gaps (pig, cow): | 7, 15 |
| Conread position: | 289-702 |
| Cow position: | chr10:60360890-60361296 (view UCSC Genome Browser custom track) |
| Alignm length: | 431 |
| Alignm identity: | 294 |
| Alignm E-value: | 3e-39 |
| Alignm gaps (pig, cow): | 43, 15 |
| Conread position: | 378-704 |
| Cow position: | chr10:32429800-32430117 (view UCSC Genome Browser custom track) |
| Alignm length: | 339 |
| Alignm identity: | 230 |
| Alignm E-value: | 3e-26 |
| Alignm gaps (pig, cow): | 77, 48 |
| Conread position: | 381-701 |
| Cow position: | chr10:21488037-21488355 (view UCSC Genome Browser custom track) |
| Alignm length: | 333 |
| Alignm identity: | 243 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 81, 28 |
| Conread position: | 387-703 |
| Cow position: | chr10:51782333-51782018 (view UCSC Genome Browser custom track) |
| Alignm length: | 328 |
| Alignm identity: | 233 |
| Alignm E-value: | 4.99983e-42 |
| Alignm gaps (pig, cow): | 76, 34 |
| Conread position: | 393-697 |
| Cow position: | chr10:55285038-55285355 (view UCSC Genome Browser custom track) |
| Alignm length: | 322 |
| Alignm identity: | 247 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 69, 32 |
| Conread position: | 396-697 |
| Cow position: | chr10:39815313-39815005 (view UCSC Genome Browser custom track) |
| Alignm length: | 314 |
| Alignm identity: | 241 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 91, 20 |
| Conread position: | 402-697 |
| Cow position: | chr10:7897392-7897089 (view UCSC Genome Browser custom track) |
| Alignm length: | 309 |
| Alignm identity: | 231 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 61, 14 |
| Conread position: | 413-705 |
| Cow position: | chr10:29631699-29631397 (view UCSC Genome Browser custom track) |
| Alignm length: | 306 |
| Alignm identity: | 233 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 49, 118 |
| Conread position: | 426-706 |
| Cow position: | chr10:36469333-36469057 (view UCSC Genome Browser custom track) |
| Alignm length: | 292 |
| Alignm identity: | 214 |
| Alignm E-value: | 8e-37 |
| Alignm gaps (pig, cow): | 36, 92 |
| Conread position: | 444-705 |
| Cow position: | chr10:28946627-28946878 (view UCSC Genome Browser custom track) |
| Alignm length: | 263 |
| Alignm identity: | 196 |
| Alignm E-value: | 2.00386e-43 |
| Alignm gaps (pig, cow): | 36, 9 |
Show alignments to all cow chromosomes.