Cow genome map

Conread name: Utr1-UTR01H020100

Conread position: 1-141
Cow position:
Alignm length: 145
Alignm identity: 118
Alignm E-value: 4e-30
Alignm gaps (pig, cow): 24, 123

Conread position: 1-157
Cow position:
Alignm length: 159
Alignm identity: 120
Alignm E-value: 9e-27
Alignm gaps (pig, cow): 94, 122

Conread position: 1-157
Cow position:
Alignm length: 159
Alignm identity: 122
Alignm E-value: 9e-28
Alignm gaps (pig, cow): 84, 95

Conread position: 1-157
Cow position:
Alignm length: 159
Alignm identity: 121
Alignm E-value: 9e-27
Alignm gaps (pig, cow): 94, 122

Conread position: 1-157
Cow position:
Alignm length: 159
Alignm identity: 122
Alignm E-value: 1e-28
Alignm gaps (pig, cow): 94, 122

Conread position: 1-358
Cow position:
Alignm length: 375
Alignm identity: 279
Alignm E-value: 0
Alignm gaps (pig, cow): 94, 107

Conread position: 1-360
Cow position:
Alignm length: 375
Alignm identity: 283
Alignm E-value: 0
Alignm gaps (pig, cow): 94, 242

Conread position: 1-382
Cow position:
Alignm length: 399
Alignm identity: 295
Alignm E-value: 0
Alignm gaps (pig, cow): 94, 243

Conread position: 1-391
Cow position:
Alignm length: 407
Alignm identity: 307
Alignm E-value: 0
Alignm gaps (pig, cow): 94, 245

Conread position: 1-414
Cow position:
Alignm length: 431
Alignm identity: 324
Alignm E-value: 0
Alignm gaps (pig, cow): 92, 105

Conread position: 1-551
Cow position:
Alignm length: 569
Alignm identity: 406
Alignm E-value: 0
Alignm gaps (pig, cow): 94, 243

Conread position: 1-564
Cow position:
Alignm length: 583
Alignm identity: 400
Alignm E-value: 0
Alignm gaps (pig, cow): 93, 45

Conread position: 1-611
Cow position:
Alignm length: 648
Alignm identity: 443
Alignm E-value: 0
Alignm gaps (pig, cow): 98, 259

Conread position: 1-696
Cow position:
Alignm length: 721
Alignm identity: 493
Alignm E-value: 0
Alignm gaps (pig, cow): 95, 123

Conread position: 1-697
Cow position:
Alignm length: 734
Alignm identity: 527
Alignm E-value: 0
Alignm gaps (pig, cow): 97, 240

Conread position: 1-697
Cow position:
Alignm length: 714
Alignm identity: 513
Alignm E-value: 0
Alignm gaps (pig, cow): 94, 80

Conread position: 1-697
Cow position:
Alignm length: 712
Alignm identity: 510
Alignm E-value: 0
Alignm gaps (pig, cow): 94, 242

Conread position: 1-697
Cow position:
Alignm length: 714
Alignm identity: 519
Alignm E-value: 0
Alignm gaps (pig, cow): 94, 175

Conread position: 1-697
Cow position:
Alignm length: 717
Alignm identity: 510
Alignm E-value: 0
Alignm gaps (pig, cow): 94, 243

Conread position: 1-697
Cow position:
Alignm length: 722
Alignm identity: 521
Alignm E-value: 0
Alignm gaps (pig, cow): 97, 44

Conread position: 1-697
Cow position:
Alignm length: 715
Alignm identity: 518
Alignm E-value: 0
Alignm gaps (pig, cow): 94, 243

Conread position: 1-697
Cow position:
Alignm length: 725
Alignm identity: 535
Alignm E-value: 0
Alignm gaps (pig, cow): 97, 243

Conread position: 1-697
Cow position:
Alignm length: 718
Alignm identity: 519
Alignm E-value: 0
Alignm gaps (pig, cow): 94, 230

Conread position: 1-704
Cow position:
Alignm length: 723
Alignm identity: 525
Alignm E-value: 0
Alignm gaps (pig, cow): 53, 125

Conread position: 1-704
Cow position:
Alignm length: 735
Alignm identity: 543
Alignm E-value: 0
Alignm gaps (pig, cow): 70, 125

Conread position: 1-705
Cow position:
Alignm length: 731
Alignm identity: 545
Alignm E-value: 0
Alignm gaps (pig, cow): 97, 240

Conread position: 1-705
Cow position:
Alignm length: 727
Alignm identity: 521
Alignm E-value: 0
Alignm gaps (pig, cow): 94, 243

Conread position: 1-705
Cow position:
Alignm length: 734
Alignm identity: 533
Alignm E-value: 0
Alignm gaps (pig, cow): 97, 245

Conread position: 3-157
Cow position:
Alignm length: 157
Alignm identity: 123
Alignm E-value: 4e-30
Alignm gaps (pig, cow): 95, 120

Conread position: 3-390
Cow position:
Alignm length: 404
Alignm identity: 297
Alignm E-value: 0
Alignm gaps (pig, cow): 92, 120

Conread position: 3-396
Cow position:
Alignm length: 410
Alignm identity: 307
Alignm E-value: 0
Alignm gaps (pig, cow): 92, 242

Conread position: 3-676
Cow position:
Alignm length: 703
Alignm identity: 509
Alignm E-value: 0
Alignm gaps (pig, cow): 95, 122

Conread position: 3-688
Cow position:
Alignm length: 706
Alignm identity: 518
Alignm E-value: 0
Alignm gaps (pig, cow): 92, 120

Conread position: 3-697
Cow position:
Alignm length: 725
Alignm identity: 538
Alignm E-value: 0
Alignm gaps (pig, cow): 92, 120

Conread position: 3-697
Cow position:
Alignm length: 713
Alignm identity: 531
Alignm E-value: 0
Alignm gaps (pig, cow): 92, 67

Conread position: 3-705
Cow position:
Alignm length: 733
Alignm identity: 533
Alignm E-value: 0
Alignm gaps (pig, cow): 95, 105

Conread position: 3-705
Cow position:
Alignm length: 721
Alignm identity: 527
Alignm E-value: 0
Alignm gaps (pig, cow): 92, 120

Conread position: 3-705
Cow position:
Alignm length: 721
Alignm identity: 528
Alignm E-value: 0
Alignm gaps (pig, cow): 92, 120

Conread position: 3-705
Cow position:
Alignm length: 732
Alignm identity: 543
Alignm E-value: 0
Alignm gaps (pig, cow): 92, 241

Conread position: 3-705
Cow position:
Alignm length: 734
Alignm identity: 531
Alignm E-value: 0
Alignm gaps (pig, cow): 92, 71

Conread position: 3-705
Cow position:
Alignm length: 720
Alignm identity: 516
Alignm E-value: 0
Alignm gaps (pig, cow): 92, 240

Conread position: 3-705
Cow position:
Alignm length: 731
Alignm identity: 531
Alignm E-value: 0
Alignm gaps (pig, cow): 95, 119

Conread position: 4-471
Cow position:
Alignm length: 485
Alignm identity: 363
Alignm E-value: 0
Alignm gaps (pig, cow): 91, 241

Conread position: 5-697
Cow position:
Alignm length: 724
Alignm identity: 529
Alignm E-value: 0
Alignm gaps (pig, cow): 93, 77

Conread position: 5-701
Cow position:
Alignm length: 702
Alignm identity: 506
Alignm E-value: 0
Alignm gaps (pig, cow): 90, 118

Conread position: 7-697
Cow position:
Alignm length: 713
Alignm identity: 505
Alignm E-value: 0
Alignm gaps (pig, cow): 91, 237

Conread position: 15-706
Cow position:
Alignm length: 710
Alignm identity: 472
Alignm E-value: 0
Alignm gaps (pig, cow): 67, 99

Conread position: 22-705
Cow position:
Alignm length: 709
Alignm identity: 528
Alignm E-value: 0
Alignm gaps (pig, cow): 76, 100

Conread position: 22-705
Cow position:
Alignm length: 692
Alignm identity: 468
Alignm E-value: 0
Alignm gaps (pig, cow): 75, 95

Conread position: 27-358
Cow position:
Alignm length: 348
Alignm identity: 256
Alignm E-value: 0
Alignm gaps (pig, cow): 68, 217

Conread position: 35-706
Cow position:
Alignm length: 686
Alignm identity: 470
Alignm E-value: 0
Alignm gaps (pig, cow): 94, 22

Conread position: 40-413
Cow position:
Alignm length: 388
Alignm identity: 254
Alignm E-value: 2e-25
Alignm gaps (pig, cow): 58, 34

Conread position: 57-697
Cow position:
Alignm length: 668
Alignm identity: 477
Alignm E-value: 0
Alignm gaps (pig, cow): 41, 68

Conread position: 73-701
Cow position:
Alignm length: 654
Alignm identity: 483
Alignm E-value: 0
Alignm gaps (pig, cow): 25, 50

Conread position: 94-705
Cow position:
Alignm length: 617
Alignm identity: 441
Alignm E-value: 0
Alignm gaps (pig, cow): 41, 30

Conread position: 95-579
Cow position:
Alignm length: 488
Alignm identity: 342
Alignm E-value: 0
Alignm gaps (pig, cow): 237, 29

Conread position: 137-704
Cow position:
Alignm length: 587
Alignm identity: 390
Alignm E-value: 2.00386e-43
Alignm gaps (pig, cow): 71, 108

Conread position: 143-698
Cow position:
Alignm length: 562
Alignm identity: 405
Alignm E-value: 0
Alignm gaps (pig, cow): 83, 91

Conread position: 195-696
Cow position:
Alignm length: 505
Alignm identity: 340
Alignm E-value: 0
Alignm gaps (pig, cow): 30, 37

Conread position: 219-461
Cow position:
Alignm length: 245
Alignm identity: 176
Alignm E-value: 2e-25
Alignm gaps (pig, cow): 7, 15

Conread position: 289-702
Cow position:
Alignm length: 431
Alignm identity: 294
Alignm E-value: 3e-39
Alignm gaps (pig, cow): 43, 15

Conread position: 378-704
Cow position:
Alignm length: 339
Alignm identity: 230
Alignm E-value: 3e-26
Alignm gaps (pig, cow): 77, 48

Conread position: 381-701
Cow position:
Alignm length: 333
Alignm identity: 243
Alignm E-value: 0
Alignm gaps (pig, cow): 81, 28

Conread position: 387-703
Cow position:
Alignm length: 328
Alignm identity: 233
Alignm E-value: 4.99983e-42
Alignm gaps (pig, cow): 76, 34

Conread position: 393-697
Cow position:
Alignm length: 322
Alignm identity: 247
Alignm E-value: 0
Alignm gaps (pig, cow): 69, 32

Conread position: 396-697
Cow position:
Alignm length: 314
Alignm identity: 241
Alignm E-value: 0
Alignm gaps (pig, cow): 91, 20

Conread position: 402-697
Cow position:
Alignm length: 309
Alignm identity: 231
Alignm E-value: 0
Alignm gaps (pig, cow): 61, 14

Conread position: 413-705
Cow position:
Alignm length: 306
Alignm identity: 233
Alignm E-value: 0
Alignm gaps (pig, cow): 49, 118

Conread position: 426-706
Cow position:
Alignm length: 292
Alignm identity: 214
Alignm E-value: 8e-37
Alignm gaps (pig, cow): 36, 92

Conread position: 444-705
Cow position:
Alignm length: 263
Alignm identity: 196
Alignm E-value: 2.00386e-43
Alignm gaps (pig, cow): 36, 9

Show alignments to all cow chromosomes.