Cow genome map

Conread name: Utr1-UTR01H020100

Conread position: 1-149
Cow position:
Alignm length: 151
Alignm identity: 119
Alignm E-value: 1e-27
Alignm gaps (pig, cow): 94, 122

Conread position: 1-157
Cow position:
Alignm length: 160
Alignm identity: 122
Alignm E-value: 1e-25
Alignm gaps (pig, cow): 72, 83

Conread position: 1-183
Cow position:
Alignm length: 194
Alignm identity: 150
Alignm E-value: 2e-32
Alignm gaps (pig, cow): 94, 117

Conread position: 1-210
Cow position:
Alignm length: 214
Alignm identity: 156
Alignm E-value: 5e-30
Alignm gaps (pig, cow): 97, 69

Conread position: 1-274
Cow position:
Alignm length: 289
Alignm identity: 213
Alignm E-value: 8.40779e-45
Alignm gaps (pig, cow): 94, 243

Conread position: 1-312
Cow position:
Alignm length: 325
Alignm identity: 239
Alignm E-value: 0
Alignm gaps (pig, cow): 137, 120

Conread position: 1-391
Cow position:
Alignm length: 410
Alignm identity: 296
Alignm E-value: 0
Alignm gaps (pig, cow): 94, 244

Conread position: 1-399
Cow position:
Alignm length: 416
Alignm identity: 305
Alignm E-value: 0
Alignm gaps (pig, cow): 94, 243

Conread position: 1-402
Cow position:
Alignm length: 419
Alignm identity: 298
Alignm E-value: 0
Alignm gaps (pig, cow): 94, 243

Conread position: 1-406
Cow position:
Alignm length: 410
Alignm identity: 294
Alignm E-value: 0
Alignm gaps (pig, cow): 193, 109

Conread position: 1-419
Cow position:
Alignm length: 435
Alignm identity: 319
Alignm E-value: 0
Alignm gaps (pig, cow): 94, 243

Conread position: 1-448
Cow position:
Alignm length: 463
Alignm identity: 349
Alignm E-value: 0
Alignm gaps (pig, cow): 94, 121

Conread position: 1-475
Cow position:
Alignm length: 502
Alignm identity: 359
Alignm E-value: 0
Alignm gaps (pig, cow): 94, 243

Conread position: 1-477
Cow position:
Alignm length: 496
Alignm identity: 354
Alignm E-value: 0
Alignm gaps (pig, cow): 94, 81

Conread position: 1-506
Cow position:
Alignm length: 525
Alignm identity: 382
Alignm E-value: 0
Alignm gaps (pig, cow): 53, 245

Conread position: 1-651
Cow position:
Alignm length: 664
Alignm identity: 403
Alignm E-value: 5e-30
Alignm gaps (pig, cow): 116, 86

Conread position: 1-697
Cow position:
Alignm length: 720
Alignm identity: 524
Alignm E-value: 0
Alignm gaps (pig, cow): 97, 245

Conread position: 1-697
Cow position:
Alignm length: 711
Alignm identity: 494
Alignm E-value: 0
Alignm gaps (pig, cow): 94, 60

Conread position: 1-697
Cow position:
Alignm length: 726
Alignm identity: 528
Alignm E-value: 0
Alignm gaps (pig, cow): 97, 241

Conread position: 1-697
Cow position:
Alignm length: 713
Alignm identity: 524
Alignm E-value: 0
Alignm gaps (pig, cow): 94, 172

Conread position: 1-697
Cow position:
Alignm length: 716
Alignm identity: 522
Alignm E-value: 0
Alignm gaps (pig, cow): 94, 243

Conread position: 1-697
Cow position:
Alignm length: 725
Alignm identity: 530
Alignm E-value: 0
Alignm gaps (pig, cow): 94, 245

Conread position: 1-697
Cow position:
Alignm length: 718
Alignm identity: 516
Alignm E-value: 0
Alignm gaps (pig, cow): 50, 245

Conread position: 1-697
Cow position:
Alignm length: 716
Alignm identity: 498
Alignm E-value: 0
Alignm gaps (pig, cow): 94, 122

Conread position: 1-697
Cow position:
Alignm length: 737
Alignm identity: 544
Alignm E-value: 0
Alignm gaps (pig, cow): 97, 124

Conread position: 1-697
Cow position:
Alignm length: 715
Alignm identity: 519
Alignm E-value: 0
Alignm gaps (pig, cow): 94, 121

Conread position: 1-697
Cow position:
Alignm length: 711
Alignm identity: 511
Alignm E-value: 0
Alignm gaps (pig, cow): 94, 122

Conread position: 1-697
Cow position:
Alignm length: 717
Alignm identity: 515
Alignm E-value: 0
Alignm gaps (pig, cow): 94, 245

Conread position: 1-697
Cow position:
Alignm length: 720
Alignm identity: 512
Alignm E-value: 0
Alignm gaps (pig, cow): 24, 232

Conread position: 1-705
Cow position:
Alignm length: 736
Alignm identity: 537
Alignm E-value: 0
Alignm gaps (pig, cow): 98, 124

Conread position: 1-705
Cow position:
Alignm length: 723
Alignm identity: 488
Alignm E-value: 0
Alignm gaps (pig, cow): 94, 185

Conread position: 1-705
Cow position:
Alignm length: 713
Alignm identity: 538
Alignm E-value: 0
Alignm gaps (pig, cow): 222, 121

Conread position: 1-705
Cow position:
Alignm length: 735
Alignm identity: 534
Alignm E-value: 0
Alignm gaps (pig, cow): 97, 125

Conread position: 1-705
Cow position:
Alignm length: 727
Alignm identity: 537
Alignm E-value: 0
Alignm gaps (pig, cow): 97, 124

Conread position: 1-705
Cow position:
Alignm length: 725
Alignm identity: 534
Alignm E-value: 0
Alignm gaps (pig, cow): 93, 24

Conread position: 1-705
Cow position:
Alignm length: 728
Alignm identity: 530
Alignm E-value: 0
Alignm gaps (pig, cow): 94, 9

Conread position: 2-695
Cow position:
Alignm length: 724
Alignm identity: 527
Alignm E-value: 0
Alignm gaps (pig, cow): 93, 64

Conread position: 2-697
Cow position:
Alignm length: 714
Alignm identity: 509
Alignm E-value: 0
Alignm gaps (pig, cow): 93, 242

Conread position: 3-119
Cow position:
Alignm length: 119
Alignm identity: 96
Alignm E-value: 6e-22
Alignm gaps (pig, cow): 95, 68

Conread position: 3-319
Cow position:
Alignm length: 332
Alignm identity: 251
Alignm E-value: 0
Alignm gaps (pig, cow): 95, 121

Conread position: 3-697
Cow position:
Alignm length: 725
Alignm identity: 506
Alignm E-value: 0
Alignm gaps (pig, cow): 95, 120

Conread position: 3-697
Cow position:
Alignm length: 710
Alignm identity: 512
Alignm E-value: 0
Alignm gaps (pig, cow): 92, 207

Conread position: 3-701
Cow position:
Alignm length: 717
Alignm identity: 539
Alignm E-value: 0
Alignm gaps (pig, cow): 92, 35

Conread position: 3-701
Cow position:
Alignm length: 730
Alignm identity: 533
Alignm E-value: 0
Alignm gaps (pig, cow): 94, 67

Conread position: 3-701
Cow position:
Alignm length: 727
Alignm identity: 532
Alignm E-value: 0
Alignm gaps (pig, cow): 95, 122

Conread position: 3-704
Cow position:
Alignm length: 719
Alignm identity: 494
Alignm E-value: 0
Alignm gaps (pig, cow): 92, 105

Conread position: 3-705
Cow position:
Alignm length: 710
Alignm identity: 532
Alignm E-value: 0
Alignm gaps (pig, cow): 92, 128

Conread position: 3-705
Cow position:
Alignm length: 722
Alignm identity: 530
Alignm E-value: 0
Alignm gaps (pig, cow): 92, 120

Conread position: 3-705
Cow position:
Alignm length: 743
Alignm identity: 555
Alignm E-value: 0
Alignm gaps (pig, cow): 96, 48

Conread position: 3-705
Cow position:
Alignm length: 727
Alignm identity: 545
Alignm E-value: 0
Alignm gaps (pig, cow): 92, 120

Conread position: 3-705
Cow position:
Alignm length: 729
Alignm identity: 537
Alignm E-value: 0
Alignm gaps (pig, cow): 92, 120

Conread position: 3-705
Cow position:
Alignm length: 732
Alignm identity: 543
Alignm E-value: 0
Alignm gaps (pig, cow): 95, 122

Conread position: 3-705
Cow position:
Alignm length: 724
Alignm identity: 538
Alignm E-value: 0
Alignm gaps (pig, cow): 92, 119

Conread position: 3-705
Cow position:
Alignm length: 722
Alignm identity: 543
Alignm E-value: 0
Alignm gaps (pig, cow): 92, 448

Conread position: 3-705
Cow position:
Alignm length: 736
Alignm identity: 537
Alignm E-value: 0
Alignm gaps (pig, cow): 95, 122

Conread position: 4-492
Cow position:
Alignm length: 506
Alignm identity: 359
Alignm E-value: 0
Alignm gaps (pig, cow): 94, 244

Conread position: 5-702
Cow position:
Alignm length: 719
Alignm identity: 531
Alignm E-value: 0
Alignm gaps (pig, cow): 133, 86

Conread position: 8-194
Cow position:
Alignm length: 202
Alignm identity: 151
Alignm E-value: 1e-28
Alignm gaps (pig, cow): 87, 117

Conread position: 8-703
Cow position:
Alignm length: 702
Alignm identity: 500
Alignm E-value: 0
Alignm gaps (pig, cow): 87, 114

Conread position: 14-697
Cow position:
Alignm length: 710
Alignm identity: 495
Alignm E-value: 0
Alignm gaps (pig, cow): 81, 231

Conread position: 16-157
Cow position:
Alignm length: 144
Alignm identity: 109
Alignm E-value: 2e-23
Alignm gaps (pig, cow): 79, 107

Conread position: 74-658
Cow position:
Alignm length: 611
Alignm identity: 446
Alignm E-value: 0
Alignm gaps (pig, cow): 50, 8

Conread position: 90-705
Cow position:
Alignm length: 647
Alignm identity: 469
Alignm E-value: 0
Alignm gaps (pig, cow): 8, 35

Conread position: 145-705
Cow position:
Alignm length: 574
Alignm identity: 419
Alignm E-value: 0
Alignm gaps (pig, cow): 187, 231

Conread position: 204-565
Cow position:
Alignm length: 364
Alignm identity: 261
Alignm E-value: 0
Alignm gaps (pig, cow): 19, 30

Conread position: 385-709
Cow position:
Alignm length: 327
Alignm identity: 237
Alignm E-value: 0
Alignm gaps (pig, cow): 161, 31

Conread position: 402-697
Cow position:
Alignm length: 308
Alignm identity: 228
Alignm E-value: 0
Alignm gaps (pig, cow): 60, 14

Conread position: 424-705
Cow position:
Alignm length: 296
Alignm identity: 212
Alignm E-value: 5e-31
Alignm gaps (pig, cow): 38, 97

Conread position: 429-705
Cow position:
Alignm length: 288
Alignm identity: 210
Alignm E-value: 1e-38
Alignm gaps (pig, cow): 33, 111

Show alignments to all cow chromosomes.