Cow genome map
| Conread name: | Utr1-UTR01H020100 |
| Conread position: | 1-205 |
| Cow position: | chr14:45302697-45302480 (view UCSC Genome Browser custom track) |
| Alignm length: | 220 |
| Alignm identity: | 165 |
| Alignm E-value: | 1e-32 |
| Alignm gaps (pig, cow): | 97, 112 |
| Conread position: | 1-224 |
| Cow position: | chr14:23901564-23901801 (view UCSC Genome Browser custom track) |
| Alignm length: | 238 |
| Alignm identity: | 177 |
| Alignm E-value: | 6e-37 |
| Alignm gaps (pig, cow): | 94, 0 |
| Conread position: | 1-377 |
| Cow position: | chr14:16343874-16343482 (view UCSC Genome Browser custom track) |
| Alignm length: | 395 |
| Alignm identity: | 296 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 95, 121 |
| Conread position: | 1-397 |
| Cow position: | chr14:44552169-44552566 (view UCSC Genome Browser custom track) |
| Alignm length: | 409 |
| Alignm identity: | 295 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 96, 11 |
| Conread position: | 1-399 |
| Cow position: | chr14:35917328-35916903 (view UCSC Genome Browser custom track) |
| Alignm length: | 428 |
| Alignm identity: | 302 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 94, 175 |
| Conread position: | 1-406 |
| Cow position: | chr14:5512101-5512519 (view UCSC Genome Browser custom track) |
| Alignm length: | 420 |
| Alignm identity: | 306 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 94, 242 |
| Conread position: | 1-406 |
| Cow position: | chr14:44131175-44131580 (view UCSC Genome Browser custom track) |
| Alignm length: | 422 |
| Alignm identity: | 303 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 97, 60 |
| Conread position: | 1-534 |
| Cow position: | chr14:23257634-23258172 (view UCSC Genome Browser custom track) |
| Alignm length: | 549 |
| Alignm identity: | 389 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 97, 122 |
| Conread position: | 1-601 |
| Cow position: | chr14:44378077-44378678 (view UCSC Genome Browser custom track) |
| Alignm length: | 619 |
| Alignm identity: | 433 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 8, 61 |
| Conread position: | 1-605 |
| Cow position: | chr14:11561740-11561141 (view UCSC Genome Browser custom track) |
| Alignm length: | 619 |
| Alignm identity: | 416 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 148, 59 |
| Conread position: | 1-620 |
| Cow position: | chr14:30584681-30584053 (view UCSC Genome Browser custom track) |
| Alignm length: | 636 |
| Alignm identity: | 443 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 97, 243 |
| Conread position: | 1-690 |
| Cow position: | chr14:45671772-45671077 (view UCSC Genome Browser custom track) |
| Alignm length: | 709 |
| Alignm identity: | 518 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 94, 243 |
| Conread position: | 1-696 |
| Cow position: | chr14:33393507-33392822 (view UCSC Genome Browser custom track) |
| Alignm length: | 715 |
| Alignm identity: | 515 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 97, 55 |
| Conread position: | 1-697 |
| Cow position: | chr14:750857-751542 (view UCSC Genome Browser custom track) |
| Alignm length: | 704 |
| Alignm identity: | 509 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 97, 122 |
| Conread position: | 1-697 |
| Cow position: | chr14:9045842-9046554 (view UCSC Genome Browser custom track) |
| Alignm length: | 737 |
| Alignm identity: | 525 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 72, 130 |
| Conread position: | 1-697 |
| Cow position: | chr14:27977634-27978337 (view UCSC Genome Browser custom track) |
| Alignm length: | 716 |
| Alignm identity: | 521 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 94, 245 |
| Conread position: | 1-697 |
| Cow position: | chr14:29047410-29046708 (view UCSC Genome Browser custom track) |
| Alignm length: | 725 |
| Alignm identity: | 522 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 97, 212 |
| Conread position: | 1-704 |
| Cow position: | chr14:33401966-33402665 (view UCSC Genome Browser custom track) |
| Alignm length: | 719 |
| Alignm identity: | 510 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 85, 236 |
| Conread position: | 1-705 |
| Cow position: | chr14:12742790-12742083 (view UCSC Genome Browser custom track) |
| Alignm length: | 724 |
| Alignm identity: | 531 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 94, 46 |
| Conread position: | 1-705 |
| Cow position: | chr14:44775761-44775057 (view UCSC Genome Browser custom track) |
| Alignm length: | 724 |
| Alignm identity: | 515 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 65, 72 |
| Conread position: | 1-705 |
| Cow position: | chr14:45206598-45207279 (view UCSC Genome Browser custom track) |
| Alignm length: | 724 |
| Alignm identity: | 498 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 92, 124 |
| Conread position: | 1-705 |
| Cow position: | chr14:46392248-46391552 (view UCSC Genome Browser custom track) |
| Alignm length: | 713 |
| Alignm identity: | 491 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 114, 96 |
| Conread position: | 3-278 |
| Cow position: | chr14:13303305-13303587 (view UCSC Genome Browser custom track) |
| Alignm length: | 286 |
| Alignm identity: | 206 |
| Alignm E-value: | 3e-40 |
| Alignm gaps (pig, cow): | 92, 111 |
| Conread position: | 3-361 |
| Cow position: | chr14:50393757-50393406 (view UCSC Genome Browser custom track) |
| Alignm length: | 362 |
| Alignm identity: | 249 |
| Alignm E-value: | 9.80909e-45 |
| Alignm gaps (pig, cow): | 95, 78 |
| Conread position: | 3-406 |
| Cow position: | chr14:12610727-12611145 (view UCSC Genome Browser custom track) |
| Alignm length: | 423 |
| Alignm identity: | 316 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 92, 121 |
| Conread position: | 3-539 |
| Cow position: | chr14:190244-190786 (view UCSC Genome Browser custom track) |
| Alignm length: | 556 |
| Alignm identity: | 402 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 92, 200 |
| Conread position: | 3-657 |
| Cow position: | chr14:30596101-30595432 (view UCSC Genome Browser custom track) |
| Alignm length: | 687 |
| Alignm identity: | 491 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 95, 10 |
| Conread position: | 3-686 |
| Cow position: | chr14:2284615-2285294 (view UCSC Genome Browser custom track) |
| Alignm length: | 701 |
| Alignm identity: | 512 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 92, 241 |
| Conread position: | 3-697 |
| Cow position: | chr14:5529345-5530044 (view UCSC Genome Browser custom track) |
| Alignm length: | 722 |
| Alignm identity: | 526 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 95, 122 |
| Conread position: | 3-697 |
| Cow position: | chr14:32447073-32447762 (view UCSC Genome Browser custom track) |
| Alignm length: | 711 |
| Alignm identity: | 514 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 93, 237 |
| Conread position: | 3-698 |
| Cow position: | chr14:48254022-48253337 (view UCSC Genome Browser custom track) |
| Alignm length: | 702 |
| Alignm identity: | 506 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 130, 94 |
| Conread position: | 3-701 |
| Cow position: | chr14:11153885-11153170 (view UCSC Genome Browser custom track) |
| Alignm length: | 726 |
| Alignm identity: | 533 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 92, 120 |
| Conread position: | 3-701 |
| Cow position: | chr14:12899379-12900076 (view UCSC Genome Browser custom track) |
| Alignm length: | 715 |
| Alignm identity: | 522 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 93, 123 |
| Conread position: | 3-701 |
| Cow position: | chr14:16273019-16272316 (view UCSC Genome Browser custom track) |
| Alignm length: | 718 |
| Alignm identity: | 523 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 92, 242 |
| Conread position: | 3-701 |
| Cow position: | chr14:19327991-19327283 (view UCSC Genome Browser custom track) |
| Alignm length: | 721 |
| Alignm identity: | 530 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 92, 120 |
| Conread position: | 3-705 |
| Cow position: | chr14:13620872-13620156 (view UCSC Genome Browser custom track) |
| Alignm length: | 724 |
| Alignm identity: | 522 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 92, 123 |
| Conread position: | 3-705 |
| Cow position: | chr14:13779236-13779935 (view UCSC Genome Browser custom track) |
| Alignm length: | 731 |
| Alignm identity: | 498 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 171, 96 |
| Conread position: | 3-705 |
| Cow position: | chr14:16919437-16918734 (view UCSC Genome Browser custom track) |
| Alignm length: | 720 |
| Alignm identity: | 529 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 92, 120 |
| Conread position: | 3-705 |
| Cow position: | chr14:17000782-17000073 (view UCSC Genome Browser custom track) |
| Alignm length: | 724 |
| Alignm identity: | 536 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 95, 120 |
| Conread position: | 3-705 |
| Cow position: | chr14:45081327-45082039 (view UCSC Genome Browser custom track) |
| Alignm length: | 733 |
| Alignm identity: | 525 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 95, 122 |
| Conread position: | 4-705 |
| Cow position: | chr14:20782740-20783451 (view UCSC Genome Browser custom track) |
| Alignm length: | 730 |
| Alignm identity: | 534 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 91, 119 |
| Conread position: | 8-532 |
| Cow position: | chr14:17685681-17686213 (view UCSC Genome Browser custom track) |
| Alignm length: | 545 |
| Alignm identity: | 391 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 79, 86 |
| Conread position: | 8-697 |
| Cow position: | chr14:17491177-17490482 (view UCSC Genome Browser custom track) |
| Alignm length: | 707 |
| Alignm identity: | 503 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 87, 236 |
| Conread position: | 14-704 |
| Cow position: | chr14:13863802-13863114 (view UCSC Genome Browser custom track) |
| Alignm length: | 709 |
| Alignm identity: | 511 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 84, 209 |
| Conread position: | 18-704 |
| Cow position: | chr14:45711423-45710743 (view UCSC Genome Browser custom track) |
| Alignm length: | 715 |
| Alignm identity: | 520 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 80, 231 |
| Conread position: | 18-706 |
| Cow position: | chr14:45028715-45028021 (view UCSC Genome Browser custom track) |
| Alignm length: | 738 |
| Alignm identity: | 508 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 53, 70 |
| Conread position: | 22-701 |
| Cow position: | chr14:37224487-37225173 (view UCSC Genome Browser custom track) |
| Alignm length: | 710 |
| Alignm identity: | 515 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 74, 103 |
| Conread position: | 24-705 |
| Cow position: | chr14:40341354-40342037 (view UCSC Genome Browser custom track) |
| Alignm length: | 700 |
| Alignm identity: | 505 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 72, 99 |
| Conread position: | 200-622 |
| Cow position: | chr14:37413256-37412848 (view UCSC Genome Browser custom track) |
| Alignm length: | 431 |
| Alignm identity: | 304 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 23, 34 |
| Conread position: | 378-706 |
| Cow position: | chr14:39722290-39721980 (view UCSC Genome Browser custom track) |
| Alignm length: | 332 |
| Alignm identity: | 234 |
| Alignm E-value: | 2e-38 |
| Alignm gaps (pig, cow): | 63, 24 |
| Conread position: | 385-698 |
| Cow position: | chr14:13303628-13303929 (view UCSC Genome Browser custom track) |
| Alignm length: | 316 |
| Alignm identity: | 242 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 123, 31 |
| Conread position: | 402-656 |
| Cow position: | chr14:16343145-16342890 (view UCSC Genome Browser custom track) |
| Alignm length: | 265 |
| Alignm identity: | 194 |
| Alignm E-value: | 5e-36 |
| Alignm gaps (pig, cow): | 102, 13 |
| Conread position: | 402-703 |
| Cow position: | chr14:46529895-46530193 (view UCSC Genome Browser custom track) |
| Alignm length: | 314 |
| Alignm identity: | 212 |
| Alignm E-value: | 2e-25 |
| Alignm gaps (pig, cow): | 64, 138 |
| Conread position: | 403-705 |
| Cow position: | chr14:23932303-23932585 (view UCSC Genome Browser custom track) |
| Alignm length: | 304 |
| Alignm identity: | 211 |
| Alignm E-value: | 1e-32 |
| Alignm gaps (pig, cow): | 203, 53 |
| Conread position: | 404-697 |
| Cow position: | chr14:1659131-1659432 (view UCSC Genome Browser custom track) |
| Alignm length: | 307 |
| Alignm identity: | 229 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 85, 12 |
Show alignments to all cow chromosomes.