Cow genome map

Conread name: Utr1-UTR01H020100

Conread position: 1-205
Cow position:
Alignm length: 220
Alignm identity: 165
Alignm E-value: 1e-32
Alignm gaps (pig, cow): 97, 112

Conread position: 1-224
Cow position:
Alignm length: 238
Alignm identity: 177
Alignm E-value: 6e-37
Alignm gaps (pig, cow): 94, 0

Conread position: 1-377
Cow position:
Alignm length: 395
Alignm identity: 296
Alignm E-value: 0
Alignm gaps (pig, cow): 95, 121

Conread position: 1-397
Cow position:
Alignm length: 409
Alignm identity: 295
Alignm E-value: 0
Alignm gaps (pig, cow): 96, 11

Conread position: 1-399
Cow position:
Alignm length: 428
Alignm identity: 302
Alignm E-value: 0
Alignm gaps (pig, cow): 94, 175

Conread position: 1-406
Cow position:
Alignm length: 420
Alignm identity: 306
Alignm E-value: 0
Alignm gaps (pig, cow): 94, 242

Conread position: 1-406
Cow position:
Alignm length: 422
Alignm identity: 303
Alignm E-value: 0
Alignm gaps (pig, cow): 97, 60

Conread position: 1-534
Cow position:
Alignm length: 549
Alignm identity: 389
Alignm E-value: 0
Alignm gaps (pig, cow): 97, 122

Conread position: 1-601
Cow position:
Alignm length: 619
Alignm identity: 433
Alignm E-value: 0
Alignm gaps (pig, cow): 8, 61

Conread position: 1-605
Cow position:
Alignm length: 619
Alignm identity: 416
Alignm E-value: 0
Alignm gaps (pig, cow): 148, 59

Conread position: 1-620
Cow position:
Alignm length: 636
Alignm identity: 443
Alignm E-value: 0
Alignm gaps (pig, cow): 97, 243

Conread position: 1-690
Cow position:
Alignm length: 709
Alignm identity: 518
Alignm E-value: 0
Alignm gaps (pig, cow): 94, 243

Conread position: 1-696
Cow position:
Alignm length: 715
Alignm identity: 515
Alignm E-value: 0
Alignm gaps (pig, cow): 97, 55

Conread position: 1-697
Cow position:
Alignm length: 704
Alignm identity: 509
Alignm E-value: 0
Alignm gaps (pig, cow): 97, 122

Conread position: 1-697
Cow position:
Alignm length: 737
Alignm identity: 525
Alignm E-value: 0
Alignm gaps (pig, cow): 72, 130

Conread position: 1-697
Cow position:
Alignm length: 716
Alignm identity: 521
Alignm E-value: 0
Alignm gaps (pig, cow): 94, 245

Conread position: 1-697
Cow position:
Alignm length: 725
Alignm identity: 522
Alignm E-value: 0
Alignm gaps (pig, cow): 97, 212

Conread position: 1-704
Cow position:
Alignm length: 719
Alignm identity: 510
Alignm E-value: 0
Alignm gaps (pig, cow): 85, 236

Conread position: 1-705
Cow position:
Alignm length: 724
Alignm identity: 531
Alignm E-value: 0
Alignm gaps (pig, cow): 94, 46

Conread position: 1-705
Cow position:
Alignm length: 724
Alignm identity: 515
Alignm E-value: 0
Alignm gaps (pig, cow): 65, 72

Conread position: 1-705
Cow position:
Alignm length: 724
Alignm identity: 498
Alignm E-value: 0
Alignm gaps (pig, cow): 92, 124

Conread position: 1-705
Cow position:
Alignm length: 713
Alignm identity: 491
Alignm E-value: 0
Alignm gaps (pig, cow): 114, 96

Conread position: 3-278
Cow position:
Alignm length: 286
Alignm identity: 206
Alignm E-value: 3e-40
Alignm gaps (pig, cow): 92, 111

Conread position: 3-361
Cow position:
Alignm length: 362
Alignm identity: 249
Alignm E-value: 9.80909e-45
Alignm gaps (pig, cow): 95, 78

Conread position: 3-406
Cow position:
Alignm length: 423
Alignm identity: 316
Alignm E-value: 0
Alignm gaps (pig, cow): 92, 121

Conread position: 3-539
Cow position:
Alignm length: 556
Alignm identity: 402
Alignm E-value: 0
Alignm gaps (pig, cow): 92, 200

Conread position: 3-657
Cow position:
Alignm length: 687
Alignm identity: 491
Alignm E-value: 0
Alignm gaps (pig, cow): 95, 10

Conread position: 3-686
Cow position:
Alignm length: 701
Alignm identity: 512
Alignm E-value: 0
Alignm gaps (pig, cow): 92, 241

Conread position: 3-697
Cow position:
Alignm length: 722
Alignm identity: 526
Alignm E-value: 0
Alignm gaps (pig, cow): 95, 122

Conread position: 3-697
Cow position:
Alignm length: 711
Alignm identity: 514
Alignm E-value: 0
Alignm gaps (pig, cow): 93, 237

Conread position: 3-698
Cow position:
Alignm length: 702
Alignm identity: 506
Alignm E-value: 0
Alignm gaps (pig, cow): 130, 94

Conread position: 3-701
Cow position:
Alignm length: 726
Alignm identity: 533
Alignm E-value: 0
Alignm gaps (pig, cow): 92, 120

Conread position: 3-701
Cow position:
Alignm length: 715
Alignm identity: 522
Alignm E-value: 0
Alignm gaps (pig, cow): 93, 123

Conread position: 3-701
Cow position:
Alignm length: 718
Alignm identity: 523
Alignm E-value: 0
Alignm gaps (pig, cow): 92, 242

Conread position: 3-701
Cow position:
Alignm length: 721
Alignm identity: 530
Alignm E-value: 0
Alignm gaps (pig, cow): 92, 120

Conread position: 3-705
Cow position:
Alignm length: 724
Alignm identity: 522
Alignm E-value: 0
Alignm gaps (pig, cow): 92, 123

Conread position: 3-705
Cow position:
Alignm length: 731
Alignm identity: 498
Alignm E-value: 0
Alignm gaps (pig, cow): 171, 96

Conread position: 3-705
Cow position:
Alignm length: 720
Alignm identity: 529
Alignm E-value: 0
Alignm gaps (pig, cow): 92, 120

Conread position: 3-705
Cow position:
Alignm length: 724
Alignm identity: 536
Alignm E-value: 0
Alignm gaps (pig, cow): 95, 120

Conread position: 3-705
Cow position:
Alignm length: 733
Alignm identity: 525
Alignm E-value: 0
Alignm gaps (pig, cow): 95, 122

Conread position: 4-705
Cow position:
Alignm length: 730
Alignm identity: 534
Alignm E-value: 0
Alignm gaps (pig, cow): 91, 119

Conread position: 8-532
Cow position:
Alignm length: 545
Alignm identity: 391
Alignm E-value: 0
Alignm gaps (pig, cow): 79, 86

Conread position: 8-697
Cow position:
Alignm length: 707
Alignm identity: 503
Alignm E-value: 0
Alignm gaps (pig, cow): 87, 236

Conread position: 14-704
Cow position:
Alignm length: 709
Alignm identity: 511
Alignm E-value: 0
Alignm gaps (pig, cow): 84, 209

Conread position: 18-704
Cow position:
Alignm length: 715
Alignm identity: 520
Alignm E-value: 0
Alignm gaps (pig, cow): 80, 231

Conread position: 18-706
Cow position:
Alignm length: 738
Alignm identity: 508
Alignm E-value: 0
Alignm gaps (pig, cow): 53, 70

Conread position: 22-701
Cow position:
Alignm length: 710
Alignm identity: 515
Alignm E-value: 0
Alignm gaps (pig, cow): 74, 103

Conread position: 24-705
Cow position:
Alignm length: 700
Alignm identity: 505
Alignm E-value: 0
Alignm gaps (pig, cow): 72, 99

Conread position: 200-622
Cow position:
Alignm length: 431
Alignm identity: 304
Alignm E-value: 0
Alignm gaps (pig, cow): 23, 34

Conread position: 378-706
Cow position:
Alignm length: 332
Alignm identity: 234
Alignm E-value: 2e-38
Alignm gaps (pig, cow): 63, 24

Conread position: 385-698
Cow position:
Alignm length: 316
Alignm identity: 242
Alignm E-value: 0
Alignm gaps (pig, cow): 123, 31

Conread position: 402-656
Cow position:
Alignm length: 265
Alignm identity: 194
Alignm E-value: 5e-36
Alignm gaps (pig, cow): 102, 13

Conread position: 402-703
Cow position:
Alignm length: 314
Alignm identity: 212
Alignm E-value: 2e-25
Alignm gaps (pig, cow): 64, 138

Conread position: 403-705
Cow position:
Alignm length: 304
Alignm identity: 211
Alignm E-value: 1e-32
Alignm gaps (pig, cow): 203, 53

Conread position: 404-697
Cow position:
Alignm length: 307
Alignm identity: 229
Alignm E-value: 0
Alignm gaps (pig, cow): 85, 12

Show alignments to all cow chromosomes.