Cow genome map


           Conread name:
           Utr1-UTR01H020100
        

               Conread position:
               1-141
               

               Cow position:
               
               

               Alignm length:
               143
               

               Alignm identity:
               112
               

               Alignm E-value:
               7e-27
               

               Alignm gaps (pig, cow):
               94, 122
               

               Conread position:
               1-157
               

               Cow position:
               
               

               Alignm length:
               159
               

               Alignm identity:
               120
               

               Alignm E-value:
               7e-27
               

               Alignm gaps (pig, cow):
               94, 122
               

               Conread position:
               1-209
               

               Cow position:
               
               

               Alignm length:
               221
               

               Alignm identity:
               163
               

               Alignm E-value:
               4e-32
               

               Alignm gaps (pig, cow):
               120, 95
               

               Conread position:
               1-212
               

               Cow position:
               
               

               Alignm length:
               227
               

               Alignm identity:
               168
               

               Alignm E-value:
               1e-32
               

               Alignm gaps (pig, cow):
               97, 122
               

               Conread position:
               1-270
               

               Cow position:
               
               

               Alignm length:
               274
               

               Alignm identity:
               193
               

               Alignm E-value:
               3e-30
               

               Alignm gaps (pig, cow):
               94, 67
               

               Conread position:
               1-306
               

               Cow position:
               
               

               Alignm length:
               325
               

               Alignm identity:
               234
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               94, 21
               

               Conread position:
               1-376
               

               Cow position:
               
               

               Alignm length:
               392
               

               Alignm identity:
               292
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               90, 155
               

               Conread position:
               1-486
               

               Cow position:
               
               

               Alignm length:
               497
               

               Alignm identity:
               346
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               41, 36
               

               Conread position:
               1-487
               

               Cow position:
               
               

               Alignm length:
               510
               

               Alignm identity:
               365
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               23, 247
               

               Conread position:
               1-506
               

               Cow position:
               
               

               Alignm length:
               529
               

               Alignm identity:
               368
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               94, 121
               

               Conread position:
               1-568
               

               Cow position:
               
               

               Alignm length:
               594
               

               Alignm identity:
               406
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               94, 243
               

               Conread position:
               1-605
               

               Cow position:
               
               

               Alignm length:
               623
               

               Alignm identity:
               426
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               72, 82
               

               Conread position:
               1-695
               

               Cow position:
               
               

               Alignm length:
               714
               

               Alignm identity:
               454
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               94, 230
               

               Conread position:
               1-696
               

               Cow position:
               
               

               Alignm length:
               720
               

               Alignm identity:
               516
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               94, 52
               

               Conread position:
               1-697
               

               Cow position:
               
               

               Alignm length:
               718
               

               Alignm identity:
               508
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               94, 244
               

               Conread position:
               1-697
               

               Cow position:
               
               

               Alignm length:
               715
               

               Alignm identity:
               511
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               97, 155
               

               Conread position:
               1-697
               

               Cow position:
               
               

               Alignm length:
               731
               

               Alignm identity:
               516
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               94, 243
               

               Conread position:
               1-697
               

               Cow position:
               
               

               Alignm length:
               714
               

               Alignm identity:
               515
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               95, 104
               

               Conread position:
               1-697
               

               Cow position:
               
               

               Alignm length:
               715
               

               Alignm identity:
               515
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               94, 243
               

               Conread position:
               1-697
               

               Cow position:
               
               

               Alignm length:
               715
               

               Alignm identity:
               511
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               94, 243
               

               Conread position:
               1-697
               

               Cow position:
               
               

               Alignm length:
               716
               

               Alignm identity:
               515
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               94, 243
               

               Conread position:
               1-697
               

               Cow position:
               
               

               Alignm length:
               721
               

               Alignm identity:
               505
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               97, 244
               

               Conread position:
               1-701
               

               Cow position:
               
               

               Alignm length:
               732
               

               Alignm identity:
               538
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               95, 43
               

               Conread position:
               1-705
               

               Cow position:
               
               

               Alignm length:
               727
               

               Alignm identity:
               519
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               9, 46
               

               Conread position:
               1-705
               

               Cow position:
               
               

               Alignm length:
               723
               

               Alignm identity:
               499
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               94, 245
               

               Conread position:
               1-705
               

               Cow position:
               
               

               Alignm length:
               733
               

               Alignm identity:
               512
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               97, 50
               

               Conread position:
               1-705
               

               Cow position:
               
               

               Alignm length:
               741
               

               Alignm identity:
               524
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               97, 77
               

               Conread position:
               1-706
               

               Cow position:
               
               

               Alignm length:
               737
               

               Alignm identity:
               530
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               97, 60
               

               Conread position:
               1-708
               

               Cow position:
               
               

               Alignm length:
               744
               

               Alignm identity:
               528
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               152, 71
               

               Conread position:
               2-208
               

               Cow position:
               
               

               Alignm length:
               222
               

               Alignm identity:
               161
               

               Alignm E-value:
               2e-28
               

               Alignm gaps (pig, cow):
               93, 121
               

               Conread position:
               2-231
               

               Cow position:
               
               

               Alignm length:
               241
               

               Alignm identity:
               180
               

               Alignm E-value:
               6e-37
               

               Alignm gaps (pig, cow):
               23, 123
               

               Conread position:
               2-506
               

               Cow position:
               
               

               Alignm length:
               538
               

               Alignm identity:
               355
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               93, 168
               

               Conread position:
               2-568
               

               Cow position:
               
               

               Alignm length:
               582
               

               Alignm identity:
               412
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               96, 30
               

               Conread position:
               3-151
               

               Cow position:
               
               

               Alignm length:
               151
               

               Alignm identity:
               115
               

               Alignm E-value:
               6e-26
               

               Alignm gaps (pig, cow):
               92, 120
               

               Conread position:
               3-157
               

               Cow position:
               
               

               Alignm length:
               157
               

               Alignm identity:
               117
               

               Alignm E-value:
               5e-25
               

               Alignm gaps (pig, cow):
               92, 120
               

               Conread position:
               3-257
               

               Cow position:
               
               

               Alignm length:
               270
               

               Alignm identity:
               195
               

               Alignm E-value:
               6e-37
               

               Alignm gaps (pig, cow):
               92, 241
               

               Conread position:
               3-402
               

               Cow position:
               
               

               Alignm length:
               416
               

               Alignm identity:
               307
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               92, 237
               

               Conread position:
               3-405
               

               Cow position:
               
               

               Alignm length:
               419
               

               Alignm identity:
               317
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               92, 242
               

               Conread position:
               3-495
               

               Cow position:
               
               

               Alignm length:
               509
               

               Alignm identity:
               350
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               95, 237
               

               Conread position:
               3-658
               

               Cow position:
               
               

               Alignm length:
               674
               

               Alignm identity:
               477
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               92, 120
               

               Conread position:
               3-681
               

               Cow position:
               
               

               Alignm length:
               705
               

               Alignm identity:
               502
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               92, 242
               

               Conread position:
               3-696
               

               Cow position:
               
               

               Alignm length:
               724
               

               Alignm identity:
               513
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               72, 80
               

               Conread position:
               3-697
               

               Cow position:
               
               

               Alignm length:
               713
               

               Alignm identity:
               511
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               92, 241
               

               Conread position:
               3-697
               

               Cow position:
               
               

               Alignm length:
               724
               

               Alignm identity:
               540
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               86, 124
               

               Conread position:
               3-701
               

               Cow position:
               
               

               Alignm length:
               731
               

               Alignm identity:
               539
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               95, 122
               

               Conread position:
               3-701
               

               Cow position:
               
               

               Alignm length:
               716
               

               Alignm identity:
               511
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               140, 118
               

               Conread position:
               3-701
               

               Cow position:
               
               

               Alignm length:
               727
               

               Alignm identity:
               532
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               95, 67
               

               Conread position:
               3-705
               

               Cow position:
               
               

               Alignm length:
               717
               

               Alignm identity:
               529
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               95, 118
               

               Conread position:
               3-705
               

               Cow position:
               
               

               Alignm length:
               723
               

               Alignm identity:
               517
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               32, 187
               

               Conread position:
               3-705
               

               Cow position:
               
               

               Alignm length:
               718
               

               Alignm identity:
               539
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               56, 237
               

               Conread position:
               3-705
               

               Cow position:
               
               

               Alignm length:
               721
               

               Alignm identity:
               531
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               92, 243
               

               Conread position:
               3-706
               

               Cow position:
               
               

               Alignm length:
               744
               

               Alignm identity:
               544
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               95, 122
               

               Conread position:
               4-705
               

               Cow position:
               
               

               Alignm length:
               722
               

               Alignm identity:
               526
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               91, 118
               

               Conread position:
               5-398
               

               Cow position:
               
               

               Alignm length:
               412
               

               Alignm identity:
               305
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               93, 119
               

               Conread position:
               5-698
               

               Cow position:
               
               

               Alignm length:
               723
               

               Alignm identity:
               524
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               90, 118
               

               Conread position:
               5-705
               

               Cow position:
               
               

               Alignm length:
               721
               

               Alignm identity:
               529
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               90, 118
               

               Conread position:
               8-621
               

               Cow position:
               
               

               Alignm length:
               626
               

               Alignm identity:
               418
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               87, 64
               

               Conread position:
               8-705
               

               Cow position:
               
               

               Alignm length:
               707
               

               Alignm identity:
               476
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               90, 24
               

               Conread position:
               10-705
               

               Cow position:
               
               

               Alignm length:
               725
               

               Alignm identity:
               519
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               85, 230
               

               Conread position:
               13-705
               

               Cow position:
               
               

               Alignm length:
               714
               

               Alignm identity:
               538
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               11, 235
               

               Conread position:
               14-248
               

               Cow position:
               
               

               Alignm length:
               251
               

               Alignm identity:
               190
               

               Alignm E-value:
               3e-40
               

               Alignm gaps (pig, cow):
               81, 109
               

               Conread position:
               15-704
               

               Cow position:
               
               

               Alignm length:
               717
               

               Alignm identity:
               485
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               71, 119
               

               Conread position:
               16-705
               

               Cow position:
               
               

               Alignm length:
               706
               

               Alignm identity:
               498
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               70, 78
               

               Conread position:
               16-705
               

               Cow position:
               
               

               Alignm length:
               721
               

               Alignm identity:
               494
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               43, 94
               

               Conread position:
               22-701
               

               Cow position:
               
               

               Alignm length:
               700
               

               Alignm identity:
               518
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               76, 101
               

               Conread position:
               22-701
               

               Cow position:
               
               

               Alignm length:
               716
               

               Alignm identity:
               523
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               121, 77
               

               Conread position:
               40-705
               

               Cow position:
               
               

               Alignm length:
               706
               

               Alignm identity:
               503
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               57, 23
               

               Conread position:
               139-691
               

               Cow position:
               
               

               Alignm length:
               575
               

               Alignm identity:
               375
               

               Alignm E-value:
               2e-38
               

               Alignm gaps (pig, cow):
               324, 80
               

               Conread position:
               286-588
               

               Cow position:
               
               

               Alignm length:
               317
               

               Alignm identity:
               220
               

               Alignm E-value:
               9e-30
               

               Alignm gaps (pig, cow):
               46, 96
               

               Conread position:
               303-705
               

               Cow position:
               
               

               Alignm length:
               417
               

               Alignm identity:
               306
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               29, 7
               

               Conread position:
               364-527
               

               Cow position:
               
               

               Alignm length:
               177
               

               Alignm identity:
               134
               

               Alignm E-value:
               2e-24
               

               Alignm gaps (pig, cow):
               50, 129
               

               Conread position:
               384-697
               

               Cow position:
               
               

               Alignm length:
               325
               

               Alignm identity:
               235
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               24, 33
               

               Conread position:
               394-705
               

               Cow position:
               
               

               Alignm length:
               324
               

               Alignm identity:
               235
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               68, 97
               

               Conread position:
               399-589
               

               Cow position:
               
               

               Alignm length:
               201
               

               Alignm identity:
               143
               

               Alignm E-value:
               3e-21
               

               Alignm gaps (pig, cow):
               103, 17
               

               Conread position:
               399-706
               

               Cow position:
               
               

               Alignm length:
               319
               

               Alignm identity:
               228
               

               Alignm E-value:
               3.00004e-41
               

               Alignm gaps (pig, cow):
               56, 141
               

               Conread position:
               412-656
               

               Cow position:
               
               

               Alignm length:
               248
               

               Alignm identity:
               190
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               55, 124
               
Show alignments to all cow chromosomes.