Cow genome map
| Conread name: | Utr1-UTR01H020100 |
| Conread position: | 1-158 |
| Cow position: | chr16:15237655-15237809 (view UCSC Genome Browser custom track) |
| Alignm length: | 160 |
| Alignm identity: | 120 |
| Alignm E-value: | 5e-23 |
| Alignm gaps (pig, cow): | 65, 25 |
| Conread position: | 1-194 |
| Cow position: | chr16:26374526-26374730 (view UCSC Genome Browser custom track) |
| Alignm length: | 205 |
| Alignm identity: | 149 |
| Alignm E-value: | 3e-28 |
| Alignm gaps (pig, cow): | 94, 0 |
| Conread position: | 1-358 |
| Cow position: | chr16:4302405-4302033 (view UCSC Genome Browser custom track) |
| Alignm length: | 376 |
| Alignm identity: | 275 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 68, 57 |
| Conread position: | 1-360 |
| Cow position: | chr16:32667-33011 (view UCSC Genome Browser custom track) |
| Alignm length: | 362 |
| Alignm identity: | 226 |
| Alignm E-value: | 5.60519e-45 |
| Alignm gaps (pig, cow): | 94, 122 |
| Conread position: | 1-381 |
| Cow position: | chr16:28197743-28197346 (view UCSC Genome Browser custom track) |
| Alignm length: | 399 |
| Alignm identity: | 287 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 94, 243 |
| Conread position: | 1-387 |
| Cow position: | chr16:28437451-28437056 (view UCSC Genome Browser custom track) |
| Alignm length: | 400 |
| Alignm identity: | 271 |
| Alignm E-value: | 1.4013e-45 |
| Alignm gaps (pig, cow): | 94, 107 |
| Conread position: | 1-390 |
| Cow position: | chr16:28377152-28377555 (view UCSC Genome Browser custom track) |
| Alignm length: | 407 |
| Alignm identity: | 296 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 94, 243 |
| Conread position: | 1-395 |
| Cow position: | chr16:11283244-11283654 (view UCSC Genome Browser custom track) |
| Alignm length: | 412 |
| Alignm identity: | 304 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 95, 240 |
| Conread position: | 1-697 |
| Cow position: | chr16:10375664-10374966 (view UCSC Genome Browser custom track) |
| Alignm length: | 715 |
| Alignm identity: | 515 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 94, 122 |
| Conread position: | 1-697 |
| Cow position: | chr16:21185549-21186250 (view UCSC Genome Browser custom track) |
| Alignm length: | 717 |
| Alignm identity: | 522 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 94, 194 |
| Conread position: | 1-705 |
| Cow position: | chr16:5661778-5662478 (view UCSC Genome Browser custom track) |
| Alignm length: | 727 |
| Alignm identity: | 526 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 94, 243 |
| Conread position: | 1-705 |
| Cow position: | chr16:28170437-28169711 (view UCSC Genome Browser custom track) |
| Alignm length: | 735 |
| Alignm identity: | 519 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 94, 243 |
| Conread position: | 1-705 |
| Cow position: | chr16:29033985-29034689 (view UCSC Genome Browser custom track) |
| Alignm length: | 733 |
| Alignm identity: | 545 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 94, 121 |
| Conread position: | 1-705 |
| Cow position: | chr16:29046957-29047664 (view UCSC Genome Browser custom track) |
| Alignm length: | 726 |
| Alignm identity: | 513 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 94, 122 |
| Conread position: | 1-706 |
| Cow position: | chr16:25085554-25086258 (view UCSC Genome Browser custom track) |
| Alignm length: | 721 |
| Alignm identity: | 526 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 122, 96 |
| Conread position: | 1-706 |
| Cow position: | chr16:41163137-41162428 (view UCSC Genome Browser custom track) |
| Alignm length: | 723 |
| Alignm identity: | 490 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 94, 167 |
| Conread position: | 1-708 |
| Cow position: | chr16:18498357-18497672 (view UCSC Genome Browser custom track) |
| Alignm length: | 728 |
| Alignm identity: | 520 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 69, 251 |
| Conread position: | 2-706 |
| Cow position: | chr16:25171285-25171986 (view UCSC Genome Browser custom track) |
| Alignm length: | 732 |
| Alignm identity: | 487 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 96, 37 |
| Conread position: | 3-295 |
| Cow position: | chr16:10203502-10203210 (view UCSC Genome Browser custom track) |
| Alignm length: | 300 |
| Alignm identity: | 213 |
| Alignm E-value: | 8.99999e-40 |
| Alignm gaps (pig, cow): | 150, 94 |
| Conread position: | 3-361 |
| Cow position: | chr16:41166834-41166461 (view UCSC Genome Browser custom track) |
| Alignm length: | 376 |
| Alignm identity: | 274 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 92, 120 |
| Conread position: | 3-577 |
| Cow position: | chr16:28471165-28470590 (view UCSC Genome Browser custom track) |
| Alignm length: | 592 |
| Alignm identity: | 422 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 95, 120 |
| Conread position: | 3-689 |
| Cow position: | chr16:2411030-2410341 (view UCSC Genome Browser custom track) |
| Alignm length: | 706 |
| Alignm identity: | 512 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 95, 120 |
| Conread position: | 3-698 |
| Cow position: | chr16:40296240-40295528 (view UCSC Genome Browser custom track) |
| Alignm length: | 735 |
| Alignm identity: | 536 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 92, 122 |
| Conread position: | 3-701 |
| Cow position: | chr16:15476778-15477478 (view UCSC Genome Browser custom track) |
| Alignm length: | 717 |
| Alignm identity: | 531 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 95, 122 |
| Conread position: | 3-701 |
| Cow position: | chr16:23535953-23535251 (view UCSC Genome Browser custom track) |
| Alignm length: | 725 |
| Alignm identity: | 521 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 95, 122 |
| Conread position: | 3-704 |
| Cow position: | chr16:2483203-2482495 (view UCSC Genome Browser custom track) |
| Alignm length: | 726 |
| Alignm identity: | 538 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 95, 120 |
| Conread position: | 3-705 |
| Cow position: | chr16:407097-406398 (view UCSC Genome Browser custom track) |
| Alignm length: | 721 |
| Alignm identity: | 531 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 92, 237 |
| Conread position: | 3-705 |
| Cow position: | chr16:1432127-1432829 (view UCSC Genome Browser custom track) |
| Alignm length: | 725 |
| Alignm identity: | 513 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 140, 56 |
| Conread position: | 3-705 |
| Cow position: | chr16:1567516-1566809 (view UCSC Genome Browser custom track) |
| Alignm length: | 726 |
| Alignm identity: | 543 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 92, 120 |
| Conread position: | 3-705 |
| Cow position: | chr16:4479046-4478329 (view UCSC Genome Browser custom track) |
| Alignm length: | 731 |
| Alignm identity: | 532 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 92, 122 |
| Conread position: | 3-705 |
| Cow position: | chr16:10438173-10438898 (view UCSC Genome Browser custom track) |
| Alignm length: | 740 |
| Alignm identity: | 525 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 92, 120 |
| Conread position: | 3-705 |
| Cow position: | chr16:49256270-49255588 (view UCSC Genome Browser custom track) |
| Alignm length: | 722 |
| Alignm identity: | 522 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 95, 67 |
| Conread position: | 5-471 |
| Cow position: | chr16:12537986-12537504 (view UCSC Genome Browser custom track) |
| Alignm length: | 488 |
| Alignm identity: | 354 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 90, 118 |
| Conread position: | 5-701 |
| Cow position: | chr16:8816166-8815466 (view UCSC Genome Browser custom track) |
| Alignm length: | 716 |
| Alignm identity: | 531 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 90, 118 |
| Conread position: | 5-701 |
| Cow position: | chr16:26663688-26664391 (view UCSC Genome Browser custom track) |
| Alignm length: | 717 |
| Alignm identity: | 528 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 90, 118 |
| Conread position: | 5-704 |
| Cow position: | chr16:37456088-37455365 (view UCSC Genome Browser custom track) |
| Alignm length: | 744 |
| Alignm identity: | 511 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 55, 133 |
| Conread position: | 5-705 |
| Cow position: | chr16:25441565-25442270 (view UCSC Genome Browser custom track) |
| Alignm length: | 731 |
| Alignm identity: | 543 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 93, 120 |
| Conread position: | 5-705 |
| Cow position: | chr16:25457525-25456838 (view UCSC Genome Browser custom track) |
| Alignm length: | 720 |
| Alignm identity: | 524 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 90, 120 |
| Conread position: | 6-705 |
| Cow position: | chr16:14665873-14665170 (view UCSC Genome Browser custom track) |
| Alignm length: | 730 |
| Alignm identity: | 537 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 64, 76 |
| Conread position: | 9-701 |
| Cow position: | chr16:23983252-23983935 (view UCSC Genome Browser custom track) |
| Alignm length: | 712 |
| Alignm identity: | 478 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 89, 116 |
| Conread position: | 14-705 |
| Cow position: | chr16:34530260-34530944 (view UCSC Genome Browser custom track) |
| Alignm length: | 718 |
| Alignm identity: | 515 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 81, 233 |
| Conread position: | 22-705 |
| Cow position: | chr16:5484691-5485368 (view UCSC Genome Browser custom track) |
| Alignm length: | 697 |
| Alignm identity: | 498 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 96, 75 |
| Conread position: | 47-701 |
| Cow position: | chr16:7676472-7675814 (view UCSC Genome Browser custom track) |
| Alignm length: | 686 |
| Alignm identity: | 481 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 96, 76 |
| Conread position: | 73-646 |
| Cow position: | chr16:15493509-15494088 (view UCSC Genome Browser custom track) |
| Alignm length: | 602 |
| Alignm identity: | 438 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 25, 175 |
| Conread position: | 124-671 |
| Cow position: | chr16:1860293-1860819 (view UCSC Genome Browser custom track) |
| Alignm length: | 561 |
| Alignm identity: | 413 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 102, 110 |
| Conread position: | 138-701 |
| Cow position: | chr16:25342054-25342607 (view UCSC Genome Browser custom track) |
| Alignm length: | 577 |
| Alignm identity: | 428 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 88, 96 |
| Conread position: | 193-706 |
| Cow position: | chr16:42185353-42184854 (view UCSC Genome Browser custom track) |
| Alignm length: | 530 |
| Alignm identity: | 348 |
| Alignm E-value: | 8.99999e-40 |
| Alignm gaps (pig, cow): | 33, 41 |
| Conread position: | 200-700 |
| Cow position: | chr16:337314-337806 (view UCSC Genome Browser custom track) |
| Alignm length: | 516 |
| Alignm identity: | 372 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 26, 34 |
| Conread position: | 222-705 |
| Cow position: | chr16:26105891-26105409 (view UCSC Genome Browser custom track) |
| Alignm length: | 510 |
| Alignm identity: | 356 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 76, 11 |
| Conread position: | 232-532 |
| Cow position: | chr16:41570458-41570762 (view UCSC Genome Browser custom track) |
| Alignm length: | 317 |
| Alignm identity: | 227 |
| Alignm E-value: | 7e-37 |
| Alignm gaps (pig, cow): | 100, 114 |
| Conread position: | 243-697 |
| Cow position: | chr16:15567444-15567890 (view UCSC Genome Browser custom track) |
| Alignm length: | 470 |
| Alignm identity: | 345 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 87, 144 |
| Conread position: | 382-705 |
| Cow position: | chr16:3330252-3330578 (view UCSC Genome Browser custom track) |
| Alignm length: | 337 |
| Alignm identity: | 249 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 81, 11 |
| Conread position: | 401-622 |
| Cow position: | chr16:41762171-41762397 (view UCSC Genome Browser custom track) |
| Alignm length: | 230 |
| Alignm identity: | 170 |
| Alignm E-value: | 2e-35 |
| Alignm gaps (pig, cow): | 52, 142 |
| Conread position: | 402-696 |
| Cow position: | chr16:20202332-20202625 (view UCSC Genome Browser custom track) |
| Alignm length: | 302 |
| Alignm identity: | 229 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 61, 14 |
Show alignments to all cow chromosomes.