Cow genome map
| Conread name: | Utr1-UTR01H020100 |
| Conread position: | 1-141 |
| Cow position: | chr17:9080933-9080792 (view UCSC Genome Browser custom track) |
| Alignm length: | 143 |
| Alignm identity: | 114 |
| Alignm E-value: | 7e-29 |
| Alignm gaps (pig, cow): | 94, 122 |
| Conread position: | 1-157 |
| Cow position: | chr17:1382312-1382155 (view UCSC Genome Browser custom track) |
| Alignm length: | 159 |
| Alignm identity: | 122 |
| Alignm E-value: | 7e-29 |
| Alignm gaps (pig, cow): | 94, 122 |
| Conread position: | 1-249 |
| Cow position: | chr17:22132737-22132994 (view UCSC Genome Browser custom track) |
| Alignm length: | 262 |
| Alignm identity: | 193 |
| Alignm E-value: | 5e-37 |
| Alignm gaps (pig, cow): | 97, 114 |
| Conread position: | 1-342 |
| Cow position: | chr17:181805-182177 (view UCSC Genome Browser custom track) |
| Alignm length: | 374 |
| Alignm identity: | 265 |
| Alignm E-value: | 9.00054e-42 |
| Alignm gaps (pig, cow): | 94, 243 |
| Conread position: | 1-377 |
| Cow position: | chr17:2247563-2247173 (view UCSC Genome Browser custom track) |
| Alignm length: | 391 |
| Alignm identity: | 281 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 94, 0 |
| Conread position: | 1-390 |
| Cow position: | chr17:227801-227403 (view UCSC Genome Browser custom track) |
| Alignm length: | 403 |
| Alignm identity: | 289 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 119, 80 |
| Conread position: | 1-409 |
| Cow position: | chr17:8209614-8210040 (view UCSC Genome Browser custom track) |
| Alignm length: | 428 |
| Alignm identity: | 314 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 94, 243 |
| Conread position: | 1-668 |
| Cow position: | chr17:2262610-2263284 (view UCSC Genome Browser custom track) |
| Alignm length: | 685 |
| Alignm identity: | 491 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 97, 402 |
| Conread position: | 1-697 |
| Cow position: | chr17:151367-150677 (view UCSC Genome Browser custom track) |
| Alignm length: | 709 |
| Alignm identity: | 519 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 94, 122 |
| Conread position: | 1-697 |
| Cow position: | chr17:1657342-1656645 (view UCSC Genome Browser custom track) |
| Alignm length: | 731 |
| Alignm identity: | 506 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 99, 123 |
| Conread position: | 1-697 |
| Cow position: | chr17:3655788-3655087 (view UCSC Genome Browser custom track) |
| Alignm length: | 715 |
| Alignm identity: | 508 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 94, 243 |
| Conread position: | 1-697 |
| Cow position: | chr17:14216526-14215821 (view UCSC Genome Browser custom track) |
| Alignm length: | 725 |
| Alignm identity: | 521 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 97, 18 |
| Conread position: | 1-697 |
| Cow position: | chr17:15142861-15142149 (view UCSC Genome Browser custom track) |
| Alignm length: | 727 |
| Alignm identity: | 535 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 80, 249 |
| Conread position: | 1-697 |
| Cow position: | chr17:24782666-24783368 (view UCSC Genome Browser custom track) |
| Alignm length: | 717 |
| Alignm identity: | 514 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 94, 241 |
| Conread position: | 1-697 |
| Cow position: | chr17:31767535-31766831 (view UCSC Genome Browser custom track) |
| Alignm length: | 716 |
| Alignm identity: | 517 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 94, 243 |
| Conread position: | 1-697 |
| Cow position: | chr17:43989007-43989708 (view UCSC Genome Browser custom track) |
| Alignm length: | 716 |
| Alignm identity: | 511 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 94, 122 |
| Conread position: | 1-705 |
| Cow position: | chr17:4942223-4941514 (view UCSC Genome Browser custom track) |
| Alignm length: | 732 |
| Alignm identity: | 506 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 95, 185 |
| Conread position: | 1-705 |
| Cow position: | chr17:6069063-6069763 (view UCSC Genome Browser custom track) |
| Alignm length: | 719 |
| Alignm identity: | 520 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 142, 96 |
| Conread position: | 1-705 |
| Cow position: | chr17:20087238-20086552 (view UCSC Genome Browser custom track) |
| Alignm length: | 722 |
| Alignm identity: | 519 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 97, 67 |
| Conread position: | 2-697 |
| Cow position: | chr17:15436299-15436988 (view UCSC Genome Browser custom track) |
| Alignm length: | 715 |
| Alignm identity: | 531 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 95, 242 |
| Conread position: | 2-705 |
| Cow position: | chr17:6120219-6120922 (view UCSC Genome Browser custom track) |
| Alignm length: | 721 |
| Alignm identity: | 519 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 93, 242 |
| Conread position: | 3-157 |
| Cow position: | chr17:18299885-18299732 (view UCSC Genome Browser custom track) |
| Alignm length: | 158 |
| Alignm identity: | 121 |
| Alignm E-value: | 5e-25 |
| Alignm gaps (pig, cow): | 95, 43 |
| Conread position: | 3-327 |
| Cow position: | chr17:18103179-18102844 (view UCSC Genome Browser custom track) |
| Alignm length: | 340 |
| Alignm identity: | 255 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 56, 62 |
| Conread position: | 3-619 |
| Cow position: | chr17:14894669-14895300 (view UCSC Genome Browser custom track) |
| Alignm length: | 645 |
| Alignm identity: | 465 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 95, 122 |
| Conread position: | 3-697 |
| Cow position: | chr17:23323945-23323246 (view UCSC Genome Browser custom track) |
| Alignm length: | 718 |
| Alignm identity: | 516 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 95, 238 |
| Conread position: | 3-701 |
| Cow position: | chr17:2580131-2580835 (view UCSC Genome Browser custom track) |
| Alignm length: | 720 |
| Alignm identity: | 516 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 98, 121 |
| Conread position: | 3-701 |
| Cow position: | chr17:15324337-15325044 (view UCSC Genome Browser custom track) |
| Alignm length: | 733 |
| Alignm identity: | 538 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 95, 122 |
| Conread position: | 3-701 |
| Cow position: | chr17:16857010-16856308 (view UCSC Genome Browser custom track) |
| Alignm length: | 720 |
| Alignm identity: | 524 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 95, 120 |
| Conread position: | 3-701 |
| Cow position: | chr17:40805325-40806018 (view UCSC Genome Browser custom track) |
| Alignm length: | 727 |
| Alignm identity: | 514 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 120, 53 |
| Conread position: | 3-704 |
| Cow position: | chr17:5227131-5227835 (view UCSC Genome Browser custom track) |
| Alignm length: | 729 |
| Alignm identity: | 505 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 92, 50 |
| Conread position: | 3-705 |
| Cow position: | chr17:6260358-6261074 (view UCSC Genome Browser custom track) |
| Alignm length: | 728 |
| Alignm identity: | 531 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 92, 127 |
| Conread position: | 3-705 |
| Cow position: | chr17:19268322-19267609 (view UCSC Genome Browser custom track) |
| Alignm length: | 728 |
| Alignm identity: | 546 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 56, 120 |
| Conread position: | 5-151 |
| Cow position: | chr17:14238973-14239119 (view UCSC Genome Browser custom track) |
| Alignm length: | 149 |
| Alignm identity: | 112 |
| Alignm E-value: | 4e-23 |
| Alignm gaps (pig, cow): | 90, 70 |
| Conread position: | 5-705 |
| Cow position: | chr17:24029494-24028786 (view UCSC Genome Browser custom track) |
| Alignm length: | 725 |
| Alignm identity: | 536 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 90, 240 |
| Conread position: | 6-705 |
| Cow position: | chr17:1787412-1786748 (view UCSC Genome Browser custom track) |
| Alignm length: | 707 |
| Alignm identity: | 504 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 89, 62 |
| Conread position: | 8-697 |
| Cow position: | chr17:11783358-11784060 (view UCSC Genome Browser custom track) |
| Alignm length: | 713 |
| Alignm identity: | 505 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 87, 234 |
| Conread position: | 8-697 |
| Cow position: | chr17:14040520-14039839 (view UCSC Genome Browser custom track) |
| Alignm length: | 704 |
| Alignm identity: | 507 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 88, 115 |
| Conread position: | 8-705 |
| Cow position: | chr17:20402937-20403641 (view UCSC Genome Browser custom track) |
| Alignm length: | 729 |
| Alignm identity: | 532 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 78, 8 |
| Conread position: | 10-705 |
| Cow position: | chr17:20099962-20099259 (view UCSC Genome Browser custom track) |
| Alignm length: | 719 |
| Alignm identity: | 531 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 85, 237 |
| Conread position: | 14-700 |
| Cow position: | chr17:34156637-34157330 (view UCSC Genome Browser custom track) |
| Alignm length: | 708 |
| Alignm identity: | 512 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 84, 109 |
| Conread position: | 22-704 |
| Cow position: | chr17:15851219-15851905 (view UCSC Genome Browser custom track) |
| Alignm length: | 704 |
| Alignm identity: | 508 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 73, 101 |
| Conread position: | 116-697 |
| Cow position: | chr17:9080774-9080215 (view UCSC Genome Browser custom track) |
| Alignm length: | 597 |
| Alignm identity: | 417 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 101, 7 |
| Conread position: | 280-675 |
| Cow position: | chr17:22132999-22133380 (view UCSC Genome Browser custom track) |
| Alignm length: | 403 |
| Alignm identity: | 295 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 22, 72 |
| Conread position: | 376-655 |
| Cow position: | chr17:13695249-13694979 (view UCSC Genome Browser custom track) |
| Alignm length: | 282 |
| Alignm identity: | 199 |
| Alignm E-value: | 5e-36 |
| Alignm gaps (pig, cow): | 247, 26 |
| Conread position: | 387-706 |
| Cow position: | chr17:2031010-2031327 (view UCSC Genome Browser custom track) |
| Alignm length: | 334 |
| Alignm identity: | 223 |
| Alignm E-value: | 9e-21 |
| Alignm gaps (pig, cow): | 6, 81 |
| Conread position: | 413-705 |
| Cow position: | chr17:2247156-2246868 (view UCSC Genome Browser custom track) |
| Alignm length: | 301 |
| Alignm identity: | 216 |
| Alignm E-value: | 7e-39 |
| Alignm gaps (pig, cow): | 57, 39 |
Show alignments to all cow chromosomes.