Cow genome map
| Conread name: | Utr1-UTR01H020100 |
| Conread position: | 1-157 |
| Cow position: | chr18:56035572-56035728 (view UCSC Genome Browser custom track) |
| Alignm length: | 159 |
| Alignm identity: | 115 |
| Alignm E-value: | 4e-21 |
| Alignm gaps (pig, cow): | 97, 107 |
| Conread position: | 1-209 |
| Cow position: | chr18:24040010-24039788 (view UCSC Genome Browser custom track) |
| Alignm length: | 223 |
| Alignm identity: | 166 |
| Alignm E-value: | 1e-33 |
| Alignm gaps (pig, cow): | 94, 0 |
| Conread position: | 1-246 |
| Cow position: | chr18:17673882-17673636 (view UCSC Genome Browser custom track) |
| Alignm length: | 258 |
| Alignm identity: | 188 |
| Alignm E-value: | 1e-32 |
| Alignm gaps (pig, cow): | 142, 86 |
| Conread position: | 1-315 |
| Cow position: | chr18:55088205-55087882 (view UCSC Genome Browser custom track) |
| Alignm length: | 330 |
| Alignm identity: | 240 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 94, 243 |
| Conread position: | 1-336 |
| Cow position: | chr18:33336587-33336930 (view UCSC Genome Browser custom track) |
| Alignm length: | 356 |
| Alignm identity: | 263 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 82, 70 |
| Conread position: | 1-346 |
| Cow position: | chr18:51462368-51462014 (view UCSC Genome Browser custom track) |
| Alignm length: | 357 |
| Alignm identity: | 262 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 94, 114 |
| Conread position: | 1-392 |
| Cow position: | chr18:33269540-33269942 (view UCSC Genome Browser custom track) |
| Alignm length: | 409 |
| Alignm identity: | 310 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 92, 123 |
| Conread position: | 1-586 |
| Cow position: | chr18:51275321-51274743 (view UCSC Genome Browser custom track) |
| Alignm length: | 600 |
| Alignm identity: | 413 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 86, 96 |
| Conread position: | 1-697 |
| Cow position: | chr18:29237655-29238312 (view UCSC Genome Browser custom track) |
| Alignm length: | 701 |
| Alignm identity: | 508 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 94, 27 |
| Conread position: | 1-697 |
| Cow position: | chr18:51342401-51343102 (view UCSC Genome Browser custom track) |
| Alignm length: | 714 |
| Alignm identity: | 515 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 94, 199 |
| Conread position: | 1-697 |
| Cow position: | chr18:51661057-51661756 (view UCSC Genome Browser custom track) |
| Alignm length: | 715 |
| Alignm identity: | 516 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 94, 243 |
| Conread position: | 1-701 |
| Cow position: | chr18:16088862-16089537 (view UCSC Genome Browser custom track) |
| Alignm length: | 713 |
| Alignm identity: | 514 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 116, 96 |
| Conread position: | 1-704 |
| Cow position: | chr18:54023420-54022710 (view UCSC Genome Browser custom track) |
| Alignm length: | 737 |
| Alignm identity: | 534 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 97, 77 |
| Conread position: | 1-705 |
| Cow position: | chr18:16079386-16080096 (view UCSC Genome Browser custom track) |
| Alignm length: | 721 |
| Alignm identity: | 519 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 94, 239 |
| Conread position: | 2-696 |
| Cow position: | chr18:11274390-11273699 (view UCSC Genome Browser custom track) |
| Alignm length: | 715 |
| Alignm identity: | 527 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 93, 242 |
| Conread position: | 2-697 |
| Cow position: | chr18:19353087-19353780 (view UCSC Genome Browser custom track) |
| Alignm length: | 708 |
| Alignm identity: | 515 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 93, 121 |
| Conread position: | 3-391 |
| Cow position: | chr18:33952863-33952461 (view UCSC Genome Browser custom track) |
| Alignm length: | 404 |
| Alignm identity: | 301 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 92, 240 |
| Conread position: | 3-518 |
| Cow position: | chr18:32652934-32653458 (view UCSC Genome Browser custom track) |
| Alignm length: | 536 |
| Alignm identity: | 387 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 92, 120 |
| Conread position: | 3-565 |
| Cow position: | chr18:36509056-36509626 (view UCSC Genome Browser custom track) |
| Alignm length: | 585 |
| Alignm identity: | 425 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 92, 120 |
| Conread position: | 3-697 |
| Cow position: | chr18:25363937-25364608 (view UCSC Genome Browser custom track) |
| Alignm length: | 703 |
| Alignm identity: | 466 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 172, 119 |
| Conread position: | 3-698 |
| Cow position: | chr18:40479106-40479812 (view UCSC Genome Browser custom track) |
| Alignm length: | 726 |
| Alignm identity: | 525 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 95, 122 |
| Conread position: | 3-701 |
| Cow position: | chr18:16175899-16175201 (view UCSC Genome Browser custom track) |
| Alignm length: | 728 |
| Alignm identity: | 532 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 23, 122 |
| Conread position: | 3-701 |
| Cow position: | chr18:41840091-41839387 (view UCSC Genome Browser custom track) |
| Alignm length: | 732 |
| Alignm identity: | 517 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 94, 244 |
| Conread position: | 3-701 |
| Cow position: | chr18:52651634-52652330 (view UCSC Genome Browser custom track) |
| Alignm length: | 715 |
| Alignm identity: | 536 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 140, 101 |
| Conread position: | 3-705 |
| Cow position: | chr18:14131110-14131817 (view UCSC Genome Browser custom track) |
| Alignm length: | 732 |
| Alignm identity: | 532 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 95, 122 |
| Conread position: | 3-705 |
| Cow position: | chr18:14416702-14417401 (view UCSC Genome Browser custom track) |
| Alignm length: | 721 |
| Alignm identity: | 532 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 92, 242 |
| Conread position: | 3-705 |
| Cow position: | chr18:23798365-23799071 (view UCSC Genome Browser custom track) |
| Alignm length: | 723 |
| Alignm identity: | 548 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 83, 243 |
| Conread position: | 4-706 |
| Cow position: | chr18:28973166-28972462 (view UCSC Genome Browser custom track) |
| Alignm length: | 733 |
| Alignm identity: | 544 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 94, 121 |
| Conread position: | 5-361 |
| Cow position: | chr18:25351475-25351846 (view UCSC Genome Browser custom track) |
| Alignm length: | 373 |
| Alignm identity: | 278 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 90, 240 |
| Conread position: | 22-705 |
| Cow position: | chr18:37506697-37507383 (view UCSC Genome Browser custom track) |
| Alignm length: | 704 |
| Alignm identity: | 525 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 73, 101 |
| Conread position: | 138-705 |
| Cow position: | chr18:27988057-27988608 (view UCSC Genome Browser custom track) |
| Alignm length: | 572 |
| Alignm identity: | 419 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 88, 96 |
| Conread position: | 155-705 |
| Cow position: | chr18:47742387-47742927 (view UCSC Genome Browser custom track) |
| Alignm length: | 565 |
| Alignm identity: | 393 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 177, 54 |
| Conread position: | 176-705 |
| Cow position: | chr18:54005267-54004751 (view UCSC Genome Browser custom track) |
| Alignm length: | 543 |
| Alignm identity: | 393 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 62, 50 |
| Conread position: | 265-702 |
| Cow position: | chr18:56013569-56014003 (view UCSC Genome Browser custom track) |
| Alignm length: | 459 |
| Alignm identity: | 322 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 67, 12 |
| Conread position: | 339-529 |
| Cow position: | chr18:48547779-48547967 (view UCSC Genome Browser custom track) |
| Alignm length: | 191 |
| Alignm identity: | 142 |
| Alignm E-value: | 4e-33 |
| Alignm gaps (pig, cow): | 19, 0 |
| Conread position: | 369-705 |
| Cow position: | chr18:40345316-40344981 (view UCSC Genome Browser custom track) |
| Alignm length: | 348 |
| Alignm identity: | 253 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 87, 33 |
| Conread position: | 376-689 |
| Cow position: | chr18:46867815-46867502 (view UCSC Genome Browser custom track) |
| Alignm length: | 327 |
| Alignm identity: | 219 |
| Alignm E-value: | 6e-26 |
| Alignm gaps (pig, cow): | 36, 51 |
| Conread position: | 400-631 |
| Cow position: | chr18:33270060-33270293 (view UCSC Genome Browser custom track) |
| Alignm length: | 238 |
| Alignm identity: | 179 |
| Alignm E-value: | 8.99999e-40 |
| Alignm gaps (pig, cow): | 68, 9 |
| Conread position: | 401-697 |
| Cow position: | chr18:54271602-54271896 (view UCSC Genome Browser custom track) |
| Alignm length: | 303 |
| Alignm identity: | 221 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 24, 60 |
| Conread position: | 402-697 |
| Cow position: | chr18:51461940-51461636 (view UCSC Genome Browser custom track) |
| Alignm length: | 308 |
| Alignm identity: | 223 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 60, 140 |
| Conread position: | 426-622 |
| Cow position: | chr18:18528231-18528437 (view UCSC Genome Browser custom track) |
| Alignm length: | 210 |
| Alignm identity: | 156 |
| Alignm E-value: | 3e-28 |
| Alignm gaps (pig, cow): | 35, 115 |
Show alignments to all cow chromosomes.