Cow genome map
| Conread name: | Utr1-UTR01H020100 |
| Conread position: | 1-139 |
| Cow position: | chr2:53661506-53661645 (view UCSC Genome Browser custom track) |
| Alignm length: | 142 |
| Alignm identity: | 111 |
| Alignm E-value: | 3e-24 |
| Alignm gaps (pig, cow): | 94, 122 |
| Conread position: | 1-141 |
| Cow position: | chr2:39622771-39622912 (view UCSC Genome Browser custom track) |
| Alignm length: | 144 |
| Alignm identity: | 113 |
| Alignm E-value: | 9e-25 |
| Alignm gaps (pig, cow): | 69, 123 |
| Conread position: | 1-142 |
| Cow position: | chr2:15060612-15060471 (view UCSC Genome Browser custom track) |
| Alignm length: | 144 |
| Alignm identity: | 115 |
| Alignm E-value: | 1e-27 |
| Alignm gaps (pig, cow): | 97, 111 |
| Conread position: | 1-150 |
| Cow position: | chr2:5474677-5474827 (view UCSC Genome Browser custom track) |
| Alignm length: | 152 |
| Alignm identity: | 117 |
| Alignm E-value: | 4e-27 |
| Alignm gaps (pig, cow): | 94, 122 |
| Conread position: | 1-157 |
| Cow position: | chr2:49590562-49590719 (view UCSC Genome Browser custom track) |
| Alignm length: | 159 |
| Alignm identity: | 120 |
| Alignm E-value: | 1e-26 |
| Alignm gaps (pig, cow): | 94, 122 |
| Conread position: | 1-197 |
| Cow position: | chr2:54485562-54485352 (view UCSC Genome Browser custom track) |
| Alignm length: | 211 |
| Alignm identity: | 157 |
| Alignm E-value: | 2e-30 |
| Alignm gaps (pig, cow): | 94, 0 |
| Conread position: | 1-216 |
| Cow position: | chr2:28619871-28619641 (view UCSC Genome Browser custom track) |
| Alignm length: | 233 |
| Alignm identity: | 169 |
| Alignm E-value: | 9e-26 |
| Alignm gaps (pig, cow): | 49, 42 |
| Conread position: | 1-227 |
| Cow position: | chr2:80955478-80955237 (view UCSC Genome Browser custom track) |
| Alignm length: | 242 |
| Alignm identity: | 182 |
| Alignm E-value: | 1e-38 |
| Alignm gaps (pig, cow): | 94, 0 |
| Conread position: | 1-240 |
| Cow position: | chr2:41150779-41151032 (view UCSC Genome Browser custom track) |
| Alignm length: | 255 |
| Alignm identity: | 196 |
| Alignm E-value: | 8.40779e-45 |
| Alignm gaps (pig, cow): | 97, 246 |
| Conread position: | 1-355 |
| Cow position: | chr2:41686670-41687038 (view UCSC Genome Browser custom track) |
| Alignm length: | 370 |
| Alignm identity: | 274 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 74, 94 |
| Conread position: | 1-406 |
| Cow position: | chr2:73193277-73193682 (view UCSC Genome Browser custom track) |
| Alignm length: | 415 |
| Alignm identity: | 298 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 94, 122 |
| Conread position: | 1-508 |
| Cow position: | chr2:7903200-7903712 (view UCSC Genome Browser custom track) |
| Alignm length: | 527 |
| Alignm identity: | 373 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 38, 240 |
| Conread position: | 1-518 |
| Cow position: | chr2:10732612-10732092 (view UCSC Genome Browser custom track) |
| Alignm length: | 538 |
| Alignm identity: | 388 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 95, 20 |
| Conread position: | 1-585 |
| Cow position: | chr2:2381265-2381832 (view UCSC Genome Browser custom track) |
| Alignm length: | 591 |
| Alignm identity: | 391 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 94, 122 |
| Conread position: | 1-621 |
| Cow position: | chr2:12479906-12479285 (view UCSC Genome Browser custom track) |
| Alignm length: | 644 |
| Alignm identity: | 465 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 133, 96 |
| Conread position: | 1-638 |
| Cow position: | chr2:41657336-41657979 (view UCSC Genome Browser custom track) |
| Alignm length: | 666 |
| Alignm identity: | 482 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 97, 401 |
| Conread position: | 1-660 |
| Cow position: | chr2:67420789-67420131 (view UCSC Genome Browser custom track) |
| Alignm length: | 675 |
| Alignm identity: | 469 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 94, 243 |
| Conread position: | 1-695 |
| Cow position: | chr2:2412635-2411937 (view UCSC Genome Browser custom track) |
| Alignm length: | 715 |
| Alignm identity: | 517 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 97, 81 |
| Conread position: | 1-697 |
| Cow position: | chr2:364898-364206 (view UCSC Genome Browser custom track) |
| Alignm length: | 716 |
| Alignm identity: | 507 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 94, 243 |
| Conread position: | 1-697 |
| Cow position: | chr2:5484820-5484145 (view UCSC Genome Browser custom track) |
| Alignm length: | 707 |
| Alignm identity: | 487 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 118, 229 |
| Conread position: | 1-697 |
| Cow position: | chr2:9908074-9908775 (view UCSC Genome Browser custom track) |
| Alignm length: | 716 |
| Alignm identity: | 520 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 94, 209 |
| Conread position: | 1-697 |
| Cow position: | chr2:39421783-39422486 (view UCSC Genome Browser custom track) |
| Alignm length: | 716 |
| Alignm identity: | 520 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 94, 230 |
| Conread position: | 1-697 |
| Cow position: | chr2:47038253-47037572 (view UCSC Genome Browser custom track) |
| Alignm length: | 708 |
| Alignm identity: | 514 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 139, 96 |
| Conread position: | 1-697 |
| Cow position: | chr2:52616630-52617337 (view UCSC Genome Browser custom track) |
| Alignm length: | 716 |
| Alignm identity: | 514 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 22, 245 |
| Conread position: | 1-697 |
| Cow position: | chr2:59413520-59412831 (view UCSC Genome Browser custom track) |
| Alignm length: | 715 |
| Alignm identity: | 509 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 94, 36 |
| Conread position: | 1-705 |
| Cow position: | chr2:1691134-1691839 (view UCSC Genome Browser custom track) |
| Alignm length: | 730 |
| Alignm identity: | 535 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 77, 128 |
| Conread position: | 1-705 |
| Cow position: | chr2:2088012-2087296 (view UCSC Genome Browser custom track) |
| Alignm length: | 725 |
| Alignm identity: | 526 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 97, 243 |
| Conread position: | 1-705 |
| Cow position: | chr2:16900413-16901126 (view UCSC Genome Browser custom track) |
| Alignm length: | 726 |
| Alignm identity: | 542 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 97, 122 |
| Conread position: | 1-705 |
| Cow position: | chr2:31297958-31298660 (view UCSC Genome Browser custom track) |
| Alignm length: | 716 |
| Alignm identity: | 521 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 97, 122 |
| Conread position: | 1-705 |
| Cow position: | chr2:51617418-51618129 (view UCSC Genome Browser custom track) |
| Alignm length: | 732 |
| Alignm identity: | 538 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 138, 31 |
| Conread position: | 1-706 |
| Cow position: | chr2:36030197-36029506 (view UCSC Genome Browser custom track) |
| Alignm length: | 720 |
| Alignm identity: | 499 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 63, 143 |
| Conread position: | 2-404 |
| Cow position: | chr2:1113405-1113814 (view UCSC Genome Browser custom track) |
| Alignm length: | 421 |
| Alignm identity: | 307 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 92, 67 |
| Conread position: | 2-658 |
| Cow position: | chr2:14823269-14823909 (view UCSC Genome Browser custom track) |
| Alignm length: | 689 |
| Alignm identity: | 510 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 96, 27 |
| Conread position: | 3-399 |
| Cow position: | chr2:49472410-49472824 (view UCSC Genome Browser custom track) |
| Alignm length: | 415 |
| Alignm identity: | 303 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 92, 0 |
| Conread position: | 3-451 |
| Cow position: | chr2:80292789-80292334 (view UCSC Genome Browser custom track) |
| Alignm length: | 466 |
| Alignm identity: | 334 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 92, 120 |
| Conread position: | 3-657 |
| Cow position: | chr2:36980544-36981201 (view UCSC Genome Browser custom track) |
| Alignm length: | 683 |
| Alignm identity: | 499 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 95, 244 |
| Conread position: | 3-697 |
| Cow position: | chr2:3324397-3323698 (view UCSC Genome Browser custom track) |
| Alignm length: | 713 |
| Alignm identity: | 513 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 92, 228 |
| Conread position: | 3-703 |
| Cow position: | chr2:36052845-36052149 (view UCSC Genome Browser custom track) |
| Alignm length: | 724 |
| Alignm identity: | 527 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 95, 110 |
| Conread position: | 3-705 |
| Cow position: | chr2:282523-281814 (view UCSC Genome Browser custom track) |
| Alignm length: | 730 |
| Alignm identity: | 535 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 92, 67 |
| Conread position: | 3-705 |
| Cow position: | chr2:8118704-8119414 (view UCSC Genome Browser custom track) |
| Alignm length: | 723 |
| Alignm identity: | 541 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 90, 120 |
| Conread position: | 3-705 |
| Cow position: | chr2:11158957-11158253 (view UCSC Genome Browser custom track) |
| Alignm length: | 722 |
| Alignm identity: | 528 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 12, 243 |
| Conread position: | 3-705 |
| Cow position: | chr2:13045541-13044843 (view UCSC Genome Browser custom track) |
| Alignm length: | 711 |
| Alignm identity: | 516 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 92, 120 |
| Conread position: | 3-705 |
| Cow position: | chr2:22077947-22078653 (view UCSC Genome Browser custom track) |
| Alignm length: | 722 |
| Alignm identity: | 513 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 92, 171 |
| Conread position: | 3-705 |
| Cow position: | chr2:42332704-42332021 (view UCSC Genome Browser custom track) |
| Alignm length: | 716 |
| Alignm identity: | 487 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 92, 120 |
| Conread position: | 3-705 |
| Cow position: | chr2:47811008-47811719 (view UCSC Genome Browser custom track) |
| Alignm length: | 724 |
| Alignm identity: | 525 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 92, 120 |
| Conread position: | 3-706 |
| Cow position: | chr2:50077763-50078438 (view UCSC Genome Browser custom track) |
| Alignm length: | 724 |
| Alignm identity: | 517 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 92, 119 |
| Conread position: | 3-707 |
| Cow position: | chr2:6961687-6962389 (view UCSC Genome Browser custom track) |
| Alignm length: | 717 |
| Alignm identity: | 512 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 130, 97 |
| Conread position: | 4-701 |
| Cow position: | chr2:53329925-53330630 (view UCSC Genome Browser custom track) |
| Alignm length: | 734 |
| Alignm identity: | 533 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 94, 45 |
| Conread position: | 5-383 |
| Cow position: | chr2:65938285-65937895 (view UCSC Genome Browser custom track) |
| Alignm length: | 394 |
| Alignm identity: | 303 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 93, 120 |
| Conread position: | 5-612 |
| Cow position: | chr2:32065916-32065310 (view UCSC Genome Browser custom track) |
| Alignm length: | 626 |
| Alignm identity: | 447 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 92, 120 |
| Conread position: | 5-697 |
| Cow position: | chr2:9958906-9958205 (view UCSC Genome Browser custom track) |
| Alignm length: | 724 |
| Alignm identity: | 519 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 93, 242 |
| Conread position: | 5-705 |
| Cow position: | chr2:32655834-32656514 (view UCSC Genome Browser custom track) |
| Alignm length: | 719 |
| Alignm identity: | 531 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 93, 117 |
| Conread position: | 8-697 |
| Cow position: | chr2:4402991-4402298 (view UCSC Genome Browser custom track) |
| Alignm length: | 715 |
| Alignm identity: | 516 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 90, 239 |
| Conread position: | 9-697 |
| Cow position: | chr2:54737650-54738350 (view UCSC Genome Browser custom track) |
| Alignm length: | 718 |
| Alignm identity: | 526 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 89, 116 |
| Conread position: | 13-697 |
| Cow position: | chr2:10611463-10610784 (view UCSC Genome Browser custom track) |
| Alignm length: | 698 |
| Alignm identity: | 505 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 82, 110 |
| Conread position: | 14-192 |
| Cow position: | chr2:51990081-51989889 (view UCSC Genome Browser custom track) |
| Alignm length: | 193 |
| Alignm identity: | 143 |
| Alignm E-value: | 9e-26 |
| Alignm gaps (pig, cow): | 81, 0 |
| Conread position: | 14-705 |
| Cow position: | chr2:37789758-37789050 (view UCSC Genome Browser custom track) |
| Alignm length: | 734 |
| Alignm identity: | 501 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 75, 37 |
| Conread position: | 17-686 |
| Cow position: | chr2:28614136-28613477 (view UCSC Genome Browser custom track) |
| Alignm length: | 685 |
| Alignm identity: | 492 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 81, 108 |
| Conread position: | 17-705 |
| Cow position: | chr2:28793427-28794111 (view UCSC Genome Browser custom track) |
| Alignm length: | 721 |
| Alignm identity: | 516 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 82, 34 |
| Conread position: | 22-705 |
| Cow position: | chr2:28649416-28648735 (view UCSC Genome Browser custom track) |
| Alignm length: | 713 |
| Alignm identity: | 524 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 76, 103 |
| Conread position: | 23-695 |
| Cow position: | chr2:78742771-78743437 (view UCSC Genome Browser custom track) |
| Alignm length: | 699 |
| Alignm identity: | 496 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 75, 231 |
| Conread position: | 25-703 |
| Cow position: | chr2:28640662-28639976 (view UCSC Genome Browser custom track) |
| Alignm length: | 697 |
| Alignm identity: | 508 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 70, 98 |
| Conread position: | 35-705 |
| Cow position: | chr2:78762848-78763503 (view UCSC Genome Browser custom track) |
| Alignm length: | 687 |
| Alignm identity: | 502 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 61, 210 |
| Conread position: | 51-703 |
| Cow position: | chr2:573790-574457 (view UCSC Genome Browser custom track) |
| Alignm length: | 686 |
| Alignm identity: | 452 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 47, 71 |
| Conread position: | 138-696 |
| Cow position: | chr2:211948-211404 (view UCSC Genome Browser custom track) |
| Alignm length: | 574 |
| Alignm identity: | 398 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 111, 182 |
| Conread position: | 259-708 |
| Cow position: | chr2:45916405-45915966 (view UCSC Genome Browser custom track) |
| Alignm length: | 462 |
| Alignm identity: | 274 |
| Alignm E-value: | 2e-32 |
| Alignm gaps (pig, cow): | 73, 111 |
| Conread position: | 262-464 |
| Cow position: | chr2:767068-766872 (view UCSC Genome Browser custom track) |
| Alignm length: | 205 |
| Alignm identity: | 153 |
| Alignm E-value: | 6e-32 |
| Alignm gaps (pig, cow): | 68, 132 |
| Conread position: | 385-622 |
| Cow position: | chr2:11730342-11730591 (view UCSC Genome Browser custom track) |
| Alignm length: | 256 |
| Alignm identity: | 181 |
| Alignm E-value: | 6e-22 |
| Alignm gaps (pig, cow): | 40, 31 |
| Conread position: | 402-697 |
| Cow position: | chr2:41048490-41048188 (view UCSC Genome Browser custom track) |
| Alignm length: | 309 |
| Alignm identity: | 231 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 91, 14 |
| Conread position: | 402-705 |
| Cow position: | chr2:34051716-34052027 (view UCSC Genome Browser custom track) |
| Alignm length: | 314 |
| Alignm identity: | 240 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 97, 59 |
| Conread position: | 412-697 |
| Cow position: | chr2:25028724-25028436 (view UCSC Genome Browser custom track) |
| Alignm length: | 298 |
| Alignm identity: | 227 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 38, 130 |
| Conread position: | 429-705 |
| Cow position: | chr2:36277806-36277532 (view UCSC Genome Browser custom track) |
| Alignm length: | 289 |
| Alignm identity: | 203 |
| Alignm E-value: | 4e-28 |
| Alignm gaps (pig, cow): | 33, 63 |
Show alignments to all cow chromosomes.