Cow genome map

Conread name: Utr1-UTR01H020100

Conread position: 1-139
Cow position:
Alignm length: 142
Alignm identity: 111
Alignm E-value: 3e-24
Alignm gaps (pig, cow): 94, 122

Conread position: 1-141
Cow position:
Alignm length: 144
Alignm identity: 113
Alignm E-value: 9e-25
Alignm gaps (pig, cow): 69, 123

Conread position: 1-142
Cow position:
Alignm length: 144
Alignm identity: 115
Alignm E-value: 1e-27
Alignm gaps (pig, cow): 97, 111

Conread position: 1-150
Cow position:
Alignm length: 152
Alignm identity: 117
Alignm E-value: 4e-27
Alignm gaps (pig, cow): 94, 122

Conread position: 1-157
Cow position:
Alignm length: 159
Alignm identity: 120
Alignm E-value: 1e-26
Alignm gaps (pig, cow): 94, 122

Conread position: 1-197
Cow position:
Alignm length: 211
Alignm identity: 157
Alignm E-value: 2e-30
Alignm gaps (pig, cow): 94, 0

Conread position: 1-216
Cow position:
Alignm length: 233
Alignm identity: 169
Alignm E-value: 9e-26
Alignm gaps (pig, cow): 49, 42

Conread position: 1-227
Cow position:
Alignm length: 242
Alignm identity: 182
Alignm E-value: 1e-38
Alignm gaps (pig, cow): 94, 0

Conread position: 1-240
Cow position:
Alignm length: 255
Alignm identity: 196
Alignm E-value: 8.40779e-45
Alignm gaps (pig, cow): 97, 246

Conread position: 1-355
Cow position:
Alignm length: 370
Alignm identity: 274
Alignm E-value: 0
Alignm gaps (pig, cow): 74, 94

Conread position: 1-406
Cow position:
Alignm length: 415
Alignm identity: 298
Alignm E-value: 0
Alignm gaps (pig, cow): 94, 122

Conread position: 1-508
Cow position:
Alignm length: 527
Alignm identity: 373
Alignm E-value: 0
Alignm gaps (pig, cow): 38, 240

Conread position: 1-518
Cow position:
Alignm length: 538
Alignm identity: 388
Alignm E-value: 0
Alignm gaps (pig, cow): 95, 20

Conread position: 1-585
Cow position:
Alignm length: 591
Alignm identity: 391
Alignm E-value: 0
Alignm gaps (pig, cow): 94, 122

Conread position: 1-621
Cow position:
Alignm length: 644
Alignm identity: 465
Alignm E-value: 0
Alignm gaps (pig, cow): 133, 96

Conread position: 1-638
Cow position:
Alignm length: 666
Alignm identity: 482
Alignm E-value: 0
Alignm gaps (pig, cow): 97, 401

Conread position: 1-660
Cow position:
Alignm length: 675
Alignm identity: 469
Alignm E-value: 0
Alignm gaps (pig, cow): 94, 243

Conread position: 1-695
Cow position:
Alignm length: 715
Alignm identity: 517
Alignm E-value: 0
Alignm gaps (pig, cow): 97, 81

Conread position: 1-697
Cow position:
Alignm length: 716
Alignm identity: 507
Alignm E-value: 0
Alignm gaps (pig, cow): 94, 243

Conread position: 1-697
Cow position:
Alignm length: 707
Alignm identity: 487
Alignm E-value: 0
Alignm gaps (pig, cow): 118, 229

Conread position: 1-697
Cow position:
Alignm length: 716
Alignm identity: 520
Alignm E-value: 0
Alignm gaps (pig, cow): 94, 209

Conread position: 1-697
Cow position:
Alignm length: 716
Alignm identity: 520
Alignm E-value: 0
Alignm gaps (pig, cow): 94, 230

Conread position: 1-697
Cow position:
Alignm length: 708
Alignm identity: 514
Alignm E-value: 0
Alignm gaps (pig, cow): 139, 96

Conread position: 1-697
Cow position:
Alignm length: 716
Alignm identity: 514
Alignm E-value: 0
Alignm gaps (pig, cow): 22, 245

Conread position: 1-697
Cow position:
Alignm length: 715
Alignm identity: 509
Alignm E-value: 0
Alignm gaps (pig, cow): 94, 36

Conread position: 1-705
Cow position:
Alignm length: 730
Alignm identity: 535
Alignm E-value: 0
Alignm gaps (pig, cow): 77, 128

Conread position: 1-705
Cow position:
Alignm length: 725
Alignm identity: 526
Alignm E-value: 0
Alignm gaps (pig, cow): 97, 243

Conread position: 1-705
Cow position:
Alignm length: 726
Alignm identity: 542
Alignm E-value: 0
Alignm gaps (pig, cow): 97, 122

Conread position: 1-705
Cow position:
Alignm length: 716
Alignm identity: 521
Alignm E-value: 0
Alignm gaps (pig, cow): 97, 122

Conread position: 1-705
Cow position:
Alignm length: 732
Alignm identity: 538
Alignm E-value: 0
Alignm gaps (pig, cow): 138, 31

Conread position: 1-706
Cow position:
Alignm length: 720
Alignm identity: 499
Alignm E-value: 0
Alignm gaps (pig, cow): 63, 143

Conread position: 2-404
Cow position:
Alignm length: 421
Alignm identity: 307
Alignm E-value: 0
Alignm gaps (pig, cow): 92, 67

Conread position: 2-658
Cow position:
Alignm length: 689
Alignm identity: 510
Alignm E-value: 0
Alignm gaps (pig, cow): 96, 27

Conread position: 3-399
Cow position:
Alignm length: 415
Alignm identity: 303
Alignm E-value: 0
Alignm gaps (pig, cow): 92, 0

Conread position: 3-451
Cow position:
Alignm length: 466
Alignm identity: 334
Alignm E-value: 0
Alignm gaps (pig, cow): 92, 120

Conread position: 3-657
Cow position:
Alignm length: 683
Alignm identity: 499
Alignm E-value: 0
Alignm gaps (pig, cow): 95, 244

Conread position: 3-697
Cow position:
Alignm length: 713
Alignm identity: 513
Alignm E-value: 0
Alignm gaps (pig, cow): 92, 228

Conread position: 3-703
Cow position:
Alignm length: 724
Alignm identity: 527
Alignm E-value: 0
Alignm gaps (pig, cow): 95, 110

Conread position: 3-705
Cow position:
Alignm length: 730
Alignm identity: 535
Alignm E-value: 0
Alignm gaps (pig, cow): 92, 67

Conread position: 3-705
Cow position:
Alignm length: 723
Alignm identity: 541
Alignm E-value: 0
Alignm gaps (pig, cow): 90, 120

Conread position: 3-705
Cow position:
Alignm length: 722
Alignm identity: 528
Alignm E-value: 0
Alignm gaps (pig, cow): 12, 243

Conread position: 3-705
Cow position:
Alignm length: 711
Alignm identity: 516
Alignm E-value: 0
Alignm gaps (pig, cow): 92, 120

Conread position: 3-705
Cow position:
Alignm length: 722
Alignm identity: 513
Alignm E-value: 0
Alignm gaps (pig, cow): 92, 171

Conread position: 3-705
Cow position:
Alignm length: 716
Alignm identity: 487
Alignm E-value: 0
Alignm gaps (pig, cow): 92, 120

Conread position: 3-705
Cow position:
Alignm length: 724
Alignm identity: 525
Alignm E-value: 0
Alignm gaps (pig, cow): 92, 120

Conread position: 3-706
Cow position:
Alignm length: 724
Alignm identity: 517
Alignm E-value: 0
Alignm gaps (pig, cow): 92, 119

Conread position: 3-707
Cow position:
Alignm length: 717
Alignm identity: 512
Alignm E-value: 0
Alignm gaps (pig, cow): 130, 97

Conread position: 4-701
Cow position:
Alignm length: 734
Alignm identity: 533
Alignm E-value: 0
Alignm gaps (pig, cow): 94, 45

Conread position: 5-383
Cow position:
Alignm length: 394
Alignm identity: 303
Alignm E-value: 0
Alignm gaps (pig, cow): 93, 120

Conread position: 5-612
Cow position:
Alignm length: 626
Alignm identity: 447
Alignm E-value: 0
Alignm gaps (pig, cow): 92, 120

Conread position: 5-697
Cow position:
Alignm length: 724
Alignm identity: 519
Alignm E-value: 0
Alignm gaps (pig, cow): 93, 242

Conread position: 5-705
Cow position:
Alignm length: 719
Alignm identity: 531
Alignm E-value: 0
Alignm gaps (pig, cow): 93, 117

Conread position: 8-697
Cow position:
Alignm length: 715
Alignm identity: 516
Alignm E-value: 0
Alignm gaps (pig, cow): 90, 239

Conread position: 9-697
Cow position:
Alignm length: 718
Alignm identity: 526
Alignm E-value: 0
Alignm gaps (pig, cow): 89, 116

Conread position: 13-697
Cow position:
Alignm length: 698
Alignm identity: 505
Alignm E-value: 0
Alignm gaps (pig, cow): 82, 110

Conread position: 14-192
Cow position:
Alignm length: 193
Alignm identity: 143
Alignm E-value: 9e-26
Alignm gaps (pig, cow): 81, 0

Conread position: 14-705
Cow position:
Alignm length: 734
Alignm identity: 501
Alignm E-value: 0
Alignm gaps (pig, cow): 75, 37

Conread position: 17-686
Cow position:
Alignm length: 685
Alignm identity: 492
Alignm E-value: 0
Alignm gaps (pig, cow): 81, 108

Conread position: 17-705
Cow position:
Alignm length: 721
Alignm identity: 516
Alignm E-value: 0
Alignm gaps (pig, cow): 82, 34

Conread position: 22-705
Cow position:
Alignm length: 713
Alignm identity: 524
Alignm E-value: 0
Alignm gaps (pig, cow): 76, 103

Conread position: 23-695
Cow position:
Alignm length: 699
Alignm identity: 496
Alignm E-value: 0
Alignm gaps (pig, cow): 75, 231

Conread position: 25-703
Cow position:
Alignm length: 697
Alignm identity: 508
Alignm E-value: 0
Alignm gaps (pig, cow): 70, 98

Conread position: 35-705
Cow position:
Alignm length: 687
Alignm identity: 502
Alignm E-value: 0
Alignm gaps (pig, cow): 61, 210

Conread position: 51-703
Cow position:
Alignm length: 686
Alignm identity: 452
Alignm E-value: 0
Alignm gaps (pig, cow): 47, 71

Conread position: 138-696
Cow position:
Alignm length: 574
Alignm identity: 398
Alignm E-value: 0
Alignm gaps (pig, cow): 111, 182

Conread position: 259-708
Cow position:
Alignm length: 462
Alignm identity: 274
Alignm E-value: 2e-32
Alignm gaps (pig, cow): 73, 111

Conread position: 262-464
Cow position:
Alignm length: 205
Alignm identity: 153
Alignm E-value: 6e-32
Alignm gaps (pig, cow): 68, 132

Conread position: 385-622
Cow position:
Alignm length: 256
Alignm identity: 181
Alignm E-value: 6e-22
Alignm gaps (pig, cow): 40, 31

Conread position: 402-697
Cow position:
Alignm length: 309
Alignm identity: 231
Alignm E-value: 0
Alignm gaps (pig, cow): 91, 14

Conread position: 402-705
Cow position:
Alignm length: 314
Alignm identity: 240
Alignm E-value: 0
Alignm gaps (pig, cow): 97, 59

Conread position: 412-697
Cow position:
Alignm length: 298
Alignm identity: 227
Alignm E-value: 0
Alignm gaps (pig, cow): 38, 130

Conread position: 429-705
Cow position:
Alignm length: 289
Alignm identity: 203
Alignm E-value: 4e-28
Alignm gaps (pig, cow): 33, 63

Show alignments to all cow chromosomes.