Cow genome map
| Conread name: | Utr1-UTR01H020100 |
| Conread position: | 1-117 |
| Cow position: | chr21:28736031-28736149 (view UCSC Genome Browser custom track) |
| Alignm length: | 119 |
| Alignm identity: | 94 |
| Alignm E-value: | 1e-21 |
| Alignm gaps (pig, cow): | 97, 0 |
| Conread position: | 1-269 |
| Cow position: | chr21:27149704-27149986 (view UCSC Genome Browser custom track) |
| Alignm length: | 284 |
| Alignm identity: | 209 |
| Alignm E-value: | 9.94922e-44 |
| Alignm gaps (pig, cow): | 94, 243 |
| Conread position: | 1-341 |
| Cow position: | chr21:4077629-4077981 (view UCSC Genome Browser custom track) |
| Alignm length: | 355 |
| Alignm identity: | 271 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 94, 123 |
| Conread position: | 1-358 |
| Cow position: | chr21:11452863-11452491 (view UCSC Genome Browser custom track) |
| Alignm length: | 375 |
| Alignm identity: | 280 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 94, 68 |
| Conread position: | 1-444 |
| Cow position: | chr21:46916468-46916927 (view UCSC Genome Browser custom track) |
| Alignm length: | 462 |
| Alignm identity: | 332 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 94, 243 |
| Conread position: | 1-506 |
| Cow position: | chr21:37046415-37046926 (view UCSC Genome Browser custom track) |
| Alignm length: | 522 |
| Alignm identity: | 366 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 94, 243 |
| Conread position: | 1-551 |
| Cow position: | chr21:25782436-25782985 (view UCSC Genome Browser custom track) |
| Alignm length: | 565 |
| Alignm identity: | 380 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 97, 236 |
| Conread position: | 1-632 |
| Cow position: | chr21:2882945-2882317 (view UCSC Genome Browser custom track) |
| Alignm length: | 653 |
| Alignm identity: | 479 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 94, 122 |
| Conread position: | 1-697 |
| Cow position: | chr21:11506390-11507105 (view UCSC Genome Browser custom track) |
| Alignm length: | 721 |
| Alignm identity: | 506 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 94, 242 |
| Conread position: | 1-697 |
| Cow position: | chr21:12055209-12054524 (view UCSC Genome Browser custom track) |
| Alignm length: | 715 |
| Alignm identity: | 516 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 94, 174 |
| Conread position: | 1-697 |
| Cow position: | chr21:39425856-39426562 (view UCSC Genome Browser custom track) |
| Alignm length: | 722 |
| Alignm identity: | 513 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 94, 209 |
| Conread position: | 1-705 |
| Cow position: | chr21:1287425-1286714 (view UCSC Genome Browser custom track) |
| Alignm length: | 731 |
| Alignm identity: | 530 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 97, 247 |
| Conread position: | 1-705 |
| Cow position: | chr21:2417009-2417712 (view UCSC Genome Browser custom track) |
| Alignm length: | 736 |
| Alignm identity: | 548 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 97, 32 |
| Conread position: | 1-705 |
| Cow position: | chr21:5840471-5839762 (view UCSC Genome Browser custom track) |
| Alignm length: | 733 |
| Alignm identity: | 532 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 97, 124 |
| Conread position: | 1-705 |
| Cow position: | chr21:28256223-28256942 (view UCSC Genome Browser custom track) |
| Alignm length: | 740 |
| Alignm identity: | 545 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 97, 247 |
| Conread position: | 2-705 |
| Cow position: | chr21:4184698-4185418 (view UCSC Genome Browser custom track) |
| Alignm length: | 734 |
| Alignm identity: | 541 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 96, 243 |
| Conread position: | 3-237 |
| Cow position: | chr21:30599127-30598877 (view UCSC Genome Browser custom track) |
| Alignm length: | 252 |
| Alignm identity: | 182 |
| Alignm E-value: | 1e-32 |
| Alignm gaps (pig, cow): | 92, 117 |
| Conread position: | 3-552 |
| Cow position: | chr21:21943967-21943416 (view UCSC Genome Browser custom track) |
| Alignm length: | 568 |
| Alignm identity: | 372 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 95, 123 |
| Conread position: | 3-702 |
| Cow position: | chr21:40270877-40270175 (view UCSC Genome Browser custom track) |
| Alignm length: | 724 |
| Alignm identity: | 524 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 92, 120 |
| Conread position: | 3-705 |
| Cow position: | chr21:3779563-3780271 (view UCSC Genome Browser custom track) |
| Alignm length: | 724 |
| Alignm identity: | 529 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 92, 122 |
| Conread position: | 3-705 |
| Cow position: | chr21:10567470-10568203 (view UCSC Genome Browser custom track) |
| Alignm length: | 750 |
| Alignm identity: | 546 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 54, 175 |
| Conread position: | 4-689 |
| Cow position: | chr21:467674-468342 (view UCSC Genome Browser custom track) |
| Alignm length: | 704 |
| Alignm identity: | 503 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 94, 122 |
| Conread position: | 5-224 |
| Cow position: | chr21:47949858-47950091 (view UCSC Genome Browser custom track) |
| Alignm length: | 234 |
| Alignm identity: | 164 |
| Alignm E-value: | 2e-26 |
| Alignm gaps (pig, cow): | 90, 0 |
| Conread position: | 5-705 |
| Cow position: | chr21:35144559-35145252 (view UCSC Genome Browser custom track) |
| Alignm length: | 717 |
| Alignm identity: | 542 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 90, 118 |
| Conread position: | 11-704 |
| Cow position: | chr21:4589192-4588483 (view UCSC Genome Browser custom track) |
| Alignm length: | 729 |
| Alignm identity: | 534 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 31, 115 |
| Conread position: | 14-306 |
| Cow position: | chr21:5015499-5015196 (view UCSC Genome Browser custom track) |
| Alignm length: | 306 |
| Alignm identity: | 226 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 80, 108 |
| Conread position: | 14-398 |
| Cow position: | chr21:13313570-13313961 (view UCSC Genome Browser custom track) |
| Alignm length: | 399 |
| Alignm identity: | 299 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 84, 43 |
| Conread position: | 14-696 |
| Cow position: | chr21:37372047-37372729 (view UCSC Genome Browser custom track) |
| Alignm length: | 696 |
| Alignm identity: | 503 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 81, 229 |
| Conread position: | 17-385 |
| Cow position: | chr21:26637393-26637007 (view UCSC Genome Browser custom track) |
| Alignm length: | 388 |
| Alignm identity: | 277 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 78, 51 |
| Conread position: | 25-354 |
| Cow position: | chr21:27566464-27566799 (view UCSC Genome Browser custom track) |
| Alignm length: | 342 |
| Alignm identity: | 258 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 72, 97 |
| Conread position: | 53-697 |
| Cow position: | chr21:31515480-31514823 (view UCSC Genome Browser custom track) |
| Alignm length: | 673 |
| Alignm identity: | 498 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 91, 46 |
| Conread position: | 216-705 |
| Cow position: | chr21:47941969-47942448 (view UCSC Genome Browser custom track) |
| Alignm length: | 501 |
| Alignm identity: | 327 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 116, 148 |
| Conread position: | 222-634 |
| Cow position: | chr21:26835919-26836326 (view UCSC Genome Browser custom track) |
| Alignm length: | 427 |
| Alignm identity: | 322 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 110, 11 |
| Conread position: | 382-689 |
| Cow position: | chr21:26237304-26237610 (view UCSC Genome Browser custom track) |
| Alignm length: | 316 |
| Alignm identity: | 214 |
| Alignm E-value: | 3e-32 |
| Alignm gaps (pig, cow): | 68, 128 |
| Conread position: | 387-706 |
| Cow position: | chr21:49296076-49296386 (view UCSC Genome Browser custom track) |
| Alignm length: | 324 |
| Alignm identity: | 226 |
| Alignm E-value: | 2e-38 |
| Alignm gaps (pig, cow): | 98, 78 |
| Conread position: | 399-576 |
| Cow position: | chr21:30562671-30562849 (view UCSC Genome Browser custom track) |
| Alignm length: | 189 |
| Alignm identity: | 143 |
| Alignm E-value: | 4e-22 |
| Alignm gaps (pig, cow): | 49, 120 |
| Conread position: | 399-701 |
| Cow position: | chr21:30598292-30597983 (view UCSC Genome Browser custom track) |
| Alignm length: | 313 |
| Alignm identity: | 233 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 63, 141 |
| Conread position: | 404-706 |
| Cow position: | chr21:21519802-21520102 (view UCSC Genome Browser custom track) |
| Alignm length: | 306 |
| Alignm identity: | 215 |
| Alignm E-value: | 1.00053e-42 |
| Alignm gaps (pig, cow): | 243, 125 |
| Conread position: | 413-622 |
| Cow position: | chr21:4077985-4078193 (view UCSC Genome Browser custom track) |
| Alignm length: | 213 |
| Alignm identity: | 162 |
| Alignm E-value: | 2e-37 |
| Alignm gaps (pig, cow): | 71, 52 |
| Conread position: | 413-705 |
| Cow position: | chr21:4716218-4716516 (view UCSC Genome Browser custom track) |
| Alignm length: | 303 |
| Alignm identity: | 208 |
| Alignm E-value: | 4e-34 |
| Alignm gaps (pig, cow): | 50, 126 |
Show alignments to all cow chromosomes.