Cow genome map


           Conread name:
           Utr1-UTR01H020100
        

               Conread position:
               1-117
               

               Cow position:
               
               

               Alignm length:
               119
               

               Alignm identity:
               94
               

               Alignm E-value:
               1e-21
               

               Alignm gaps (pig, cow):
               97, 0
               

               Conread position:
               1-269
               

               Cow position:
               
               

               Alignm length:
               284
               

               Alignm identity:
               209
               

               Alignm E-value:
               9.94922e-44
               

               Alignm gaps (pig, cow):
               94, 243
               

               Conread position:
               1-341
               

               Cow position:
               
               

               Alignm length:
               355
               

               Alignm identity:
               271
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               94, 123
               

               Conread position:
               1-358
               

               Cow position:
               
               

               Alignm length:
               375
               

               Alignm identity:
               280
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               94, 68
               

               Conread position:
               1-444
               

               Cow position:
               
               

               Alignm length:
               462
               

               Alignm identity:
               332
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               94, 243
               

               Conread position:
               1-506
               

               Cow position:
               
               

               Alignm length:
               522
               

               Alignm identity:
               366
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               94, 243
               

               Conread position:
               1-551
               

               Cow position:
               
               

               Alignm length:
               565
               

               Alignm identity:
               380
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               97, 236
               

               Conread position:
               1-632
               

               Cow position:
               
               

               Alignm length:
               653
               

               Alignm identity:
               479
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               94, 122
               

               Conread position:
               1-697
               

               Cow position:
               
               

               Alignm length:
               721
               

               Alignm identity:
               506
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               94, 242
               

               Conread position:
               1-697
               

               Cow position:
               
               

               Alignm length:
               715
               

               Alignm identity:
               516
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               94, 174
               

               Conread position:
               1-697
               

               Cow position:
               
               

               Alignm length:
               722
               

               Alignm identity:
               513
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               94, 209
               

               Conread position:
               1-705
               

               Cow position:
               
               

               Alignm length:
               731
               

               Alignm identity:
               530
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               97, 247
               

               Conread position:
               1-705
               

               Cow position:
               
               

               Alignm length:
               736
               

               Alignm identity:
               548
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               97, 32
               

               Conread position:
               1-705
               

               Cow position:
               
               

               Alignm length:
               733
               

               Alignm identity:
               532
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               97, 124
               

               Conread position:
               1-705
               

               Cow position:
               
               

               Alignm length:
               740
               

               Alignm identity:
               545
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               97, 247
               

               Conread position:
               2-705
               

               Cow position:
               
               

               Alignm length:
               734
               

               Alignm identity:
               541
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               96, 243
               

               Conread position:
               3-237
               

               Cow position:
               
               

               Alignm length:
               252
               

               Alignm identity:
               182
               

               Alignm E-value:
               1e-32
               

               Alignm gaps (pig, cow):
               92, 117
               

               Conread position:
               3-552
               

               Cow position:
               
               

               Alignm length:
               568
               

               Alignm identity:
               372
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               95, 123
               

               Conread position:
               3-702
               

               Cow position:
               
               

               Alignm length:
               724
               

               Alignm identity:
               524
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               92, 120
               

               Conread position:
               3-705
               

               Cow position:
               
               

               Alignm length:
               724
               

               Alignm identity:
               529
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               92, 122
               

               Conread position:
               3-705
               

               Cow position:
               
               

               Alignm length:
               750
               

               Alignm identity:
               546
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               54, 175
               

               Conread position:
               4-689
               

               Cow position:
               
               

               Alignm length:
               704
               

               Alignm identity:
               503
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               94, 122
               

               Conread position:
               5-224
               

               Cow position:
               
               

               Alignm length:
               234
               

               Alignm identity:
               164
               

               Alignm E-value:
               2e-26
               

               Alignm gaps (pig, cow):
               90, 0
               

               Conread position:
               5-705
               

               Cow position:
               
               

               Alignm length:
               717
               

               Alignm identity:
               542
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               90, 118
               

               Conread position:
               11-704
               

               Cow position:
               
               

               Alignm length:
               729
               

               Alignm identity:
               534
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               31, 115
               

               Conread position:
               14-306
               

               Cow position:
               
               

               Alignm length:
               306
               

               Alignm identity:
               226
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               80, 108
               

               Conread position:
               14-398
               

               Cow position:
               
               

               Alignm length:
               399
               

               Alignm identity:
               299
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               84, 43
               

               Conread position:
               14-696
               

               Cow position:
               
               

               Alignm length:
               696
               

               Alignm identity:
               503
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               81, 229
               

               Conread position:
               17-385
               

               Cow position:
               
               

               Alignm length:
               388
               

               Alignm identity:
               277
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               78, 51
               

               Conread position:
               25-354
               

               Cow position:
               
               

               Alignm length:
               342
               

               Alignm identity:
               258
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               72, 97
               

               Conread position:
               53-697
               

               Cow position:
               
               

               Alignm length:
               673
               

               Alignm identity:
               498
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               91, 46
               

               Conread position:
               216-705
               

               Cow position:
               
               

               Alignm length:
               501
               

               Alignm identity:
               327
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               116, 148
               

               Conread position:
               222-634
               

               Cow position:
               
               

               Alignm length:
               427
               

               Alignm identity:
               322
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               110, 11
               

               Conread position:
               382-689
               

               Cow position:
               
               

               Alignm length:
               316
               

               Alignm identity:
               214
               

               Alignm E-value:
               3e-32
               

               Alignm gaps (pig, cow):
               68, 128
               

               Conread position:
               387-706
               

               Cow position:
               
               

               Alignm length:
               324
               

               Alignm identity:
               226
               

               Alignm E-value:
               2e-38
               

               Alignm gaps (pig, cow):
               98, 78
               

               Conread position:
               399-576
               

               Cow position:
               
               

               Alignm length:
               189
               

               Alignm identity:
               143
               

               Alignm E-value:
               4e-22
               

               Alignm gaps (pig, cow):
               49, 120
               

               Conread position:
               399-701
               

               Cow position:
               
               

               Alignm length:
               313
               

               Alignm identity:
               233
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               63, 141
               

               Conread position:
               404-706
               

               Cow position:
               
               

               Alignm length:
               306
               

               Alignm identity:
               215
               

               Alignm E-value:
               1.00053e-42
               

               Alignm gaps (pig, cow):
               243, 125
               

               Conread position:
               413-622
               

               Cow position:
               
               

               Alignm length:
               213
               

               Alignm identity:
               162
               

               Alignm E-value:
               2e-37
               

               Alignm gaps (pig, cow):
               71, 52
               

               Conread position:
               413-705
               

               Cow position:
               
               

               Alignm length:
               303
               

               Alignm identity:
               208
               

               Alignm E-value:
               4e-34
               

               Alignm gaps (pig, cow):
               50, 126
               
Show alignments to all cow chromosomes.