Cow genome map
| Conread name: | Utr1-UTR01H020100 |
| Conread position: | 1-124 |
| Cow position: | chr24:11866766-11866643 (view UCSC Genome Browser custom track) |
| Alignm length: | 126 |
| Alignm identity: | 99 |
| Alignm E-value: | 1e-21 |
| Alignm gaps (pig, cow): | 94, 87 |
| Conread position: | 1-157 |
| Cow position: | chr24:44326063-44326220 (view UCSC Genome Browser custom track) |
| Alignm length: | 159 |
| Alignm identity: | 121 |
| Alignm E-value: | 6e-28 |
| Alignm gaps (pig, cow): | 94, 122 |
| Conread position: | 1-186 |
| Cow position: | chr24:21960244-21960045 (view UCSC Genome Browser custom track) |
| Alignm length: | 200 |
| Alignm identity: | 153 |
| Alignm E-value: | 3e-32 |
| Alignm gaps (pig, cow): | 94, 0 |
| Conread position: | 1-224 |
| Cow position: | chr24:6646408-6646646 (view UCSC Genome Browser custom track) |
| Alignm length: | 239 |
| Alignm identity: | 177 |
| Alignm E-value: | 1e-35 |
| Alignm gaps (pig, cow): | 94, 0 |
| Conread position: | 1-311 |
| Cow position: | chr24:8030997-8031321 (view UCSC Genome Browser custom track) |
| Alignm length: | 326 |
| Alignm identity: | 243 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 94, 243 |
| Conread position: | 1-385 |
| Cow position: | chr24:43814471-43814869 (view UCSC Genome Browser custom track) |
| Alignm length: | 400 |
| Alignm identity: | 292 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 94, 242 |
| Conread position: | 1-406 |
| Cow position: | chr24:12143632-12143212 (view UCSC Genome Browser custom track) |
| Alignm length: | 426 |
| Alignm identity: | 287 |
| Alignm E-value: | 1.00053e-42 |
| Alignm gaps (pig, cow): | 73, 102 |
| Conread position: | 1-418 |
| Cow position: | chr24:12484610-12484178 (view UCSC Genome Browser custom track) |
| Alignm length: | 435 |
| Alignm identity: | 287 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 94, 46 |
| Conread position: | 1-478 |
| Cow position: | chr24:36709066-36709551 (view UCSC Genome Browser custom track) |
| Alignm length: | 503 |
| Alignm identity: | 348 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 150, 62 |
| Conread position: | 1-665 |
| Cow position: | chr24:6024397-6023728 (view UCSC Genome Browser custom track) |
| Alignm length: | 696 |
| Alignm identity: | 506 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 97, 227 |
| Conread position: | 1-665 |
| Cow position: | chr24:12335052-12334382 (view UCSC Genome Browser custom track) |
| Alignm length: | 684 |
| Alignm identity: | 499 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 94, 244 |
| Conread position: | 1-697 |
| Cow position: | chr24:5992518-5991819 (view UCSC Genome Browser custom track) |
| Alignm length: | 712 |
| Alignm identity: | 508 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 121, 96 |
| Conread position: | 1-697 |
| Cow position: | chr24:6084775-6085460 (view UCSC Genome Browser custom track) |
| Alignm length: | 714 |
| Alignm identity: | 506 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 94, 243 |
| Conread position: | 1-697 |
| Cow position: | chr24:6435185-6435889 (view UCSC Genome Browser custom track) |
| Alignm length: | 716 |
| Alignm identity: | 511 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 94, 243 |
| Conread position: | 1-697 |
| Cow position: | chr24:9188027-9187336 (view UCSC Genome Browser custom track) |
| Alignm length: | 716 |
| Alignm identity: | 521 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 96, 243 |
| Conread position: | 1-697 |
| Cow position: | chr24:12700110-12699418 (view UCSC Genome Browser custom track) |
| Alignm length: | 713 |
| Alignm identity: | 507 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 97, 243 |
| Conread position: | 1-697 |
| Cow position: | chr24:23505158-23504454 (view UCSC Genome Browser custom track) |
| Alignm length: | 718 |
| Alignm identity: | 517 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 97, 243 |
| Conread position: | 1-697 |
| Cow position: | chr24:29305614-29304907 (view UCSC Genome Browser custom track) |
| Alignm length: | 720 |
| Alignm identity: | 513 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 94, 122 |
| Conread position: | 1-697 |
| Cow position: | chr24:44018241-44018914 (view UCSC Genome Browser custom track) |
| Alignm length: | 715 |
| Alignm identity: | 495 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 94, 17 |
| Conread position: | 1-704 |
| Cow position: | chr24:14389828-14389120 (view UCSC Genome Browser custom track) |
| Alignm length: | 720 |
| Alignm identity: | 523 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 97, 190 |
| Conread position: | 1-705 |
| Cow position: | chr24:13188878-13189593 (view UCSC Genome Browser custom track) |
| Alignm length: | 733 |
| Alignm identity: | 513 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 97, 243 |
| Conread position: | 1-705 |
| Cow position: | chr24:19702192-19702908 (view UCSC Genome Browser custom track) |
| Alignm length: | 732 |
| Alignm identity: | 540 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 97, 243 |
| Conread position: | 2-324 |
| Cow position: | chr24:34754775-34755098 (view UCSC Genome Browser custom track) |
| Alignm length: | 329 |
| Alignm identity: | 226 |
| Alignm E-value: | 2e-39 |
| Alignm gaps (pig, cow): | 95, 122 |
| Conread position: | 3-337 |
| Cow position: | chr24:14383879-14383538 (view UCSC Genome Browser custom track) |
| Alignm length: | 350 |
| Alignm identity: | 254 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 92, 66 |
| Conread position: | 3-656 |
| Cow position: | chr24:12109996-12109347 (view UCSC Genome Browser custom track) |
| Alignm length: | 671 |
| Alignm identity: | 465 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 94, 22 |
| Conread position: | 3-658 |
| Cow position: | chr24:17696263-17695612 (view UCSC Genome Browser custom track) |
| Alignm length: | 667 |
| Alignm identity: | 490 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 92, 138 |
| Conread position: | 3-690 |
| Cow position: | chr24:22971803-22972491 (view UCSC Genome Browser custom track) |
| Alignm length: | 707 |
| Alignm identity: | 527 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 92, 54 |
| Conread position: | 3-697 |
| Cow position: | chr24:29187999-29188699 (view UCSC Genome Browser custom track) |
| Alignm length: | 724 |
| Alignm identity: | 536 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 95, 122 |
| Conread position: | 3-698 |
| Cow position: | chr24:19834099-19834811 (view UCSC Genome Browser custom track) |
| Alignm length: | 726 |
| Alignm identity: | 529 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 92, 243 |
| Conread position: | 3-701 |
| Cow position: | chr24:9544773-9545465 (view UCSC Genome Browser custom track) |
| Alignm length: | 719 |
| Alignm identity: | 524 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 92, 120 |
| Conread position: | 3-702 |
| Cow position: | chr24:33934083-33934800 (view UCSC Genome Browser custom track) |
| Alignm length: | 727 |
| Alignm identity: | 533 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 92, 120 |
| Conread position: | 5-527 |
| Cow position: | chr24:17302747-17302256 (view UCSC Genome Browser custom track) |
| Alignm length: | 531 |
| Alignm identity: | 345 |
| Alignm E-value: | 3e-31 |
| Alignm gaps (pig, cow): | 91, 135 |
| Conread position: | 13-691 |
| Cow position: | chr24:8151539-8150887 (view UCSC Genome Browser custom track) |
| Alignm length: | 696 |
| Alignm identity: | 471 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 83, 28 |
| Conread position: | 21-705 |
| Cow position: | chr24:6406756-6407449 (view UCSC Genome Browser custom track) |
| Alignm length: | 704 |
| Alignm identity: | 518 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 74, 102 |
| Conread position: | 21-706 |
| Cow position: | chr24:9091317-9090639 (view UCSC Genome Browser custom track) |
| Alignm length: | 697 |
| Alignm identity: | 502 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 76, 102 |
| Conread position: | 37-606 |
| Cow position: | chr24:6332954-6332382 (view UCSC Genome Browser custom track) |
| Alignm length: | 595 |
| Alignm identity: | 420 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 61, 88 |
| Conread position: | 73-461 |
| Cow position: | chr24:6049338-6049715 (view UCSC Genome Browser custom track) |
| Alignm length: | 398 |
| Alignm identity: | 268 |
| Alignm E-value: | 5e-36 |
| Alignm gaps (pig, cow): | 90, 25 |
| Conread position: | 412-704 |
| Cow position: | chr24:6353262-6353548 (view UCSC Genome Browser custom track) |
| Alignm length: | 299 |
| Alignm identity: | 217 |
| Alignm E-value: | 8.00001e-41 |
| Alignm gaps (pig, cow): | 51, 123 |
Show alignments to all cow chromosomes.