Cow genome map

Conread name: Utr1-UTR01H020100

Conread position: 1-123
Cow position:
Alignm length: 125
Alignm identity: 99
Alignm E-value: 3e-24
Alignm gaps (pig, cow): 94, 0

Conread position: 1-157
Cow position:
Alignm length: 160
Alignm identity: 117
Alignm E-value: 8e-23
Alignm gaps (pig, cow): 94, 122

Conread position: 1-399
Cow position:
Alignm length: 416
Alignm identity: 305
Alignm E-value: 0
Alignm gaps (pig, cow): 95, 243

Conread position: 1-622
Cow position:
Alignm length: 638
Alignm identity: 455
Alignm E-value: 0
Alignm gaps (pig, cow): 94, 12

Conread position: 1-622
Cow position:
Alignm length: 640
Alignm identity: 452
Alignm E-value: 0
Alignm gaps (pig, cow): 94, 245

Conread position: 1-697
Cow position:
Alignm length: 715
Alignm identity: 512
Alignm E-value: 0
Alignm gaps (pig, cow): 94, 107

Conread position: 1-705
Cow position:
Alignm length: 727
Alignm identity: 528
Alignm E-value: 0
Alignm gaps (pig, cow): 97, 25

Conread position: 1-705
Cow position:
Alignm length: 734
Alignm identity: 547
Alignm E-value: 0
Alignm gaps (pig, cow): 97, 124

Conread position: 2-299
Cow position:
Alignm length: 313
Alignm identity: 230
Alignm E-value: 0
Alignm gaps (pig, cow): 93, 208

Conread position: 2-386
Cow position:
Alignm length: 401
Alignm identity: 285
Alignm E-value: 0
Alignm gaps (pig, cow): 93, 242

Conread position: 3-208
Cow position:
Alignm length: 218
Alignm identity: 155
Alignm E-value: 3e-25
Alignm gaps (pig, cow): 83, 94

Conread position: 3-406
Cow position:
Alignm length: 421
Alignm identity: 307
Alignm E-value: 0
Alignm gaps (pig, cow): 92, 120

Conread position: 3-532
Cow position:
Alignm length: 549
Alignm identity: 397
Alignm E-value: 0
Alignm gaps (pig, cow): 98, 121

Conread position: 3-665
Cow position:
Alignm length: 682
Alignm identity: 499
Alignm E-value: 0
Alignm gaps (pig, cow): 92, 242

Conread position: 3-673
Cow position:
Alignm length: 691
Alignm identity: 454
Alignm E-value: 0
Alignm gaps (pig, cow): 92, 120

Conread position: 3-698
Cow position:
Alignm length: 714
Alignm identity: 526
Alignm E-value: 0
Alignm gaps (pig, cow): 92, 123

Conread position: 3-698
Cow position:
Alignm length: 701
Alignm identity: 514
Alignm E-value: 0
Alignm gaps (pig, cow): 94, 120

Conread position: 3-701
Cow position:
Alignm length: 717
Alignm identity: 531
Alignm E-value: 0
Alignm gaps (pig, cow): 95, 44

Conread position: 3-701
Cow position:
Alignm length: 719
Alignm identity: 534
Alignm E-value: 0
Alignm gaps (pig, cow): 92, 119

Conread position: 3-705
Cow position:
Alignm length: 721
Alignm identity: 513
Alignm E-value: 0
Alignm gaps (pig, cow): 90, 55

Conread position: 3-705
Cow position:
Alignm length: 730
Alignm identity: 550
Alignm E-value: 0
Alignm gaps (pig, cow): 15, 123

Conread position: 3-705
Cow position:
Alignm length: 722
Alignm identity: 533
Alignm E-value: 0
Alignm gaps (pig, cow): 92, 120

Conread position: 3-705
Cow position:
Alignm length: 716
Alignm identity: 523
Alignm E-value: 0
Alignm gaps (pig, cow): 91, 66

Conread position: 3-705
Cow position:
Alignm length: 732
Alignm identity: 539
Alignm E-value: 0
Alignm gaps (pig, cow): 95, 122

Conread position: 3-705
Cow position:
Alignm length: 724
Alignm identity: 531
Alignm E-value: 0
Alignm gaps (pig, cow): 92, 120

Conread position: 4-278
Cow position:
Alignm length: 290
Alignm identity: 198
Alignm E-value: 3e-24
Alignm gaps (pig, cow): 91, 52

Conread position: 4-705
Cow position:
Alignm length: 729
Alignm identity: 526
Alignm E-value: 0
Alignm gaps (pig, cow): 84, 130

Conread position: 4-705
Cow position:
Alignm length: 722
Alignm identity: 522
Alignm E-value: 0
Alignm gaps (pig, cow): 91, 119

Conread position: 4-705
Cow position:
Alignm length: 718
Alignm identity: 536
Alignm E-value: 0
Alignm gaps (pig, cow): 90, 240

Conread position: 5-705
Cow position:
Alignm length: 728
Alignm identity: 524
Alignm E-value: 0
Alignm gaps (pig, cow): 90, 235

Conread position: 6-658
Cow position:
Alignm length: 666
Alignm identity: 438
Alignm E-value: 0
Alignm gaps (pig, cow): 92, 68

Conread position: 8-495
Cow position:
Alignm length: 504
Alignm identity: 352
Alignm E-value: 0
Alignm gaps (pig, cow): 90, 240

Conread position: 8-648
Cow position:
Alignm length: 664
Alignm identity: 483
Alignm E-value: 0
Alignm gaps (pig, cow): 18, 102

Conread position: 8-705
Cow position:
Alignm length: 716
Alignm identity: 521
Alignm E-value: 0
Alignm gaps (pig, cow): 86, 39

Conread position: 11-705
Cow position:
Alignm length: 714
Alignm identity: 524
Alignm E-value: 0
Alignm gaps (pig, cow): 87, 67

Conread position: 22-705
Cow position:
Alignm length: 701
Alignm identity: 511
Alignm E-value: 0
Alignm gaps (pig, cow): 73, 101

Conread position: 63-606
Cow position:
Alignm length: 578
Alignm identity: 425
Alignm E-value: 0
Alignm gaps (pig, cow): 35, 62

Conread position: 276-658
Cow position:
Alignm length: 392
Alignm identity: 281
Alignm E-value: 0
Alignm gaps (pig, cow): 56, 73

Conread position: 385-695
Cow position:
Alignm length: 321
Alignm identity: 225
Alignm E-value: 2e-39
Alignm gaps (pig, cow): 94, 9

Conread position: 399-697
Cow position:
Alignm length: 312
Alignm identity: 232
Alignm E-value: 0
Alignm gaps (pig, cow): 61, 17

Show alignments to all cow chromosomes.