Cow genome map

Conread name: Utr1-UTR01H020100

Conread position: 1-157
Cow position:
Alignm length: 159
Alignm identity: 118
Alignm E-value: 5e-26
Alignm gaps (pig, cow): 96, 0

Conread position: 1-195
Cow position:
Alignm length: 209
Alignm identity: 157
Alignm E-value: 9e-32
Alignm gaps (pig, cow): 94, 0

Conread position: 1-303
Cow position:
Alignm length: 318
Alignm identity: 236
Alignm E-value: 0
Alignm gaps (pig, cow): 94, 243

Conread position: 1-343
Cow position:
Alignm length: 360
Alignm identity: 267
Alignm E-value: 0
Alignm gaps (pig, cow): 94, 320

Conread position: 1-346
Cow position:
Alignm length: 359
Alignm identity: 257
Alignm E-value: 0
Alignm gaps (pig, cow): 43, 23

Conread position: 1-375
Cow position:
Alignm length: 391
Alignm identity: 290
Alignm E-value: 0
Alignm gaps (pig, cow): 94, 239

Conread position: 1-400
Cow position:
Alignm length: 416
Alignm identity: 303
Alignm E-value: 0
Alignm gaps (pig, cow): 94, 243

Conread position: 1-488
Cow position:
Alignm length: 505
Alignm identity: 375
Alignm E-value: 0
Alignm gaps (pig, cow): 94, 246

Conread position: 1-635
Cow position:
Alignm length: 662
Alignm identity: 463
Alignm E-value: 0
Alignm gaps (pig, cow): 94, 230

Conread position: 1-653
Cow position:
Alignm length: 670
Alignm identity: 478
Alignm E-value: 0
Alignm gaps (pig, cow): 97, 243

Conread position: 1-669
Cow position:
Alignm length: 700
Alignm identity: 507
Alignm E-value: 0
Alignm gaps (pig, cow): 97, 124

Conread position: 1-682
Cow position:
Alignm length: 698
Alignm identity: 470
Alignm E-value: 0
Alignm gaps (pig, cow): 62, 124

Conread position: 1-697
Cow position:
Alignm length: 715
Alignm identity: 498
Alignm E-value: 0
Alignm gaps (pig, cow): 94, 243

Conread position: 1-697
Cow position:
Alignm length: 721
Alignm identity: 510
Alignm E-value: 0
Alignm gaps (pig, cow): 24, 347

Conread position: 1-703
Cow position:
Alignm length: 725
Alignm identity: 510
Alignm E-value: 0
Alignm gaps (pig, cow): 94, 175

Conread position: 1-705
Cow position:
Alignm length: 716
Alignm identity: 533
Alignm E-value: 0
Alignm gaps (pig, cow): 121, 60

Conread position: 1-705
Cow position:
Alignm length: 724
Alignm identity: 527
Alignm E-value: 0
Alignm gaps (pig, cow): 94, 243

Conread position: 2-703
Cow position:
Alignm length: 717
Alignm identity: 515
Alignm E-value: 0
Alignm gaps (pig, cow): 121, 85

Conread position: 2-705
Cow position:
Alignm length: 733
Alignm identity: 538
Alignm E-value: 0
Alignm gaps (pig, cow): 96, 31

Conread position: 3-336
Cow position:
Alignm length: 350
Alignm identity: 256
Alignm E-value: 0
Alignm gaps (pig, cow): 92, 14

Conread position: 3-532
Cow position:
Alignm length: 557
Alignm identity: 404
Alignm E-value: 0
Alignm gaps (pig, cow): 95, 242

Conread position: 3-634
Cow position:
Alignm length: 650
Alignm identity: 471
Alignm E-value: 0
Alignm gaps (pig, cow): 93, 120

Conread position: 3-681
Cow position:
Alignm length: 707
Alignm identity: 520
Alignm E-value: 0
Alignm gaps (pig, cow): 92, 48

Conread position: 3-697
Cow position:
Alignm length: 702
Alignm identity: 507
Alignm E-value: 0
Alignm gaps (pig, cow): 91, 120

Conread position: 3-701
Cow position:
Alignm length: 727
Alignm identity: 531
Alignm E-value: 0
Alignm gaps (pig, cow): 113, 96

Conread position: 3-701
Cow position:
Alignm length: 748
Alignm identity: 522
Alignm E-value: 0
Alignm gaps (pig, cow): 95, 245

Conread position: 3-701
Cow position:
Alignm length: 730
Alignm identity: 539
Alignm E-value: 0
Alignm gaps (pig, cow): 94, 122

Conread position: 3-701
Cow position:
Alignm length: 739
Alignm identity: 538
Alignm E-value: 0
Alignm gaps (pig, cow): 95, 122

Conread position: 3-705
Cow position:
Alignm length: 731
Alignm identity: 524
Alignm E-value: 0
Alignm gaps (pig, cow): 95, 24

Conread position: 3-705
Cow position:
Alignm length: 722
Alignm identity: 510
Alignm E-value: 0
Alignm gaps (pig, cow): 92, 120

Conread position: 3-705
Cow position:
Alignm length: 730
Alignm identity: 516
Alignm E-value: 0
Alignm gaps (pig, cow): 95, 60

Conread position: 3-705
Cow position:
Alignm length: 724
Alignm identity: 523
Alignm E-value: 0
Alignm gaps (pig, cow): 140, 94

Conread position: 3-705
Cow position:
Alignm length: 723
Alignm identity: 533
Alignm E-value: 0
Alignm gaps (pig, cow): 92, 120

Conread position: 3-705
Cow position:
Alignm length: 722
Alignm identity: 529
Alignm E-value: 0
Alignm gaps (pig, cow): 92, 211

Conread position: 3-705
Cow position:
Alignm length: 733
Alignm identity: 542
Alignm E-value: 0
Alignm gaps (pig, cow): 95, 120

Conread position: 3-705
Cow position:
Alignm length: 721
Alignm identity: 513
Alignm E-value: 0
Alignm gaps (pig, cow): 93, 120

Conread position: 3-706
Cow position:
Alignm length: 737
Alignm identity: 532
Alignm E-value: 0
Alignm gaps (pig, cow): 91, 120

Conread position: 5-697
Cow position:
Alignm length: 706
Alignm identity: 500
Alignm E-value: 0
Alignm gaps (pig, cow): 90, 235

Conread position: 5-701
Cow position:
Alignm length: 714
Alignm identity: 523
Alignm E-value: 0
Alignm gaps (pig, cow): 93, 120

Conread position: 8-409
Cow position:
Alignm length: 421
Alignm identity: 304
Alignm E-value: 0
Alignm gaps (pig, cow): 87, 115

Conread position: 8-705
Cow position:
Alignm length: 720
Alignm identity: 526
Alignm E-value: 0
Alignm gaps (pig, cow): 87, 6

Conread position: 11-704
Cow position:
Alignm length: 714
Alignm identity: 516
Alignm E-value: 0
Alignm gaps (pig, cow): 5, 234

Conread position: 20-390
Cow position:
Alignm length: 386
Alignm identity: 286
Alignm E-value: 0
Alignm gaps (pig, cow): 72, 102

Conread position: 20-697
Cow position:
Alignm length: 702
Alignm identity: 502
Alignm E-value: 0
Alignm gaps (pig, cow): 75, 224

Conread position: 22-706
Cow position:
Alignm length: 717
Alignm identity: 524
Alignm E-value: 0
Alignm gaps (pig, cow): 39, 104

Conread position: 143-701
Cow position:
Alignm length: 573
Alignm identity: 426
Alignm E-value: 0
Alignm gaps (pig, cow): 83, 91

Conread position: 154-705
Cow position:
Alignm length: 566
Alignm identity: 409
Alignm E-value: 0
Alignm gaps (pig, cow): 72, 80

Conread position: 380-697
Cow position:
Alignm length: 331
Alignm identity: 241
Alignm E-value: 0
Alignm gaps (pig, cow): 24, 45

Show alignments to all cow chromosomes.