Cow genome map


           Conread name:
           Utr1-UTR01H020100
        

               Conread position:
               1-118
               

               Cow position:
               
               

               Alignm length:
               120
               

               Alignm identity:
               94
               

               Alignm E-value:
               2e-21
               

               Alignm gaps (pig, cow):
               98, 0
               

               Conread position:
               1-126
               

               Cow position:
               
               

               Alignm length:
               128
               

               Alignm identity:
               103
               

               Alignm E-value:
               3e-25
               

               Alignm gaps (pig, cow):
               94, 122
               

               Conread position:
               1-137
               

               Cow position:
               
               

               Alignm length:
               139
               

               Alignm identity:
               110
               

               Alignm E-value:
               1e-26
               

               Alignm gaps (pig, cow):
               94, 122
               

               Conread position:
               1-138
               

               Cow position:
               
               

               Alignm length:
               140
               

               Alignm identity:
               111
               

               Alignm E-value:
               3e-27
               

               Alignm gaps (pig, cow):
               94, 122
               

               Conread position:
               1-141
               

               Cow position:
               
               

               Alignm length:
               142
               

               Alignm identity:
               114
               

               Alignm E-value:
               1e-29
               

               Alignm gaps (pig, cow):
               94, 121
               

               Conread position:
               1-227
               

               Cow position:
               
               

               Alignm length:
               242
               

               Alignm identity:
               178
               

               Alignm E-value:
               5e-30
               

               Alignm gaps (pig, cow):
               94, 31
               

               Conread position:
               1-262
               

               Cow position:
               
               

               Alignm length:
               277
               

               Alignm identity:
               200
               

               Alignm E-value:
               4e-38
               

               Alignm gaps (pig, cow):
               94, 243
               

               Conread position:
               1-354
               

               Cow position:
               
               

               Alignm length:
               368
               

               Alignm identity:
               272
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               94, 244
               

               Conread position:
               1-357
               

               Cow position:
               
               

               Alignm length:
               373
               

               Alignm identity:
               275
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               94, 243
               

               Conread position:
               1-358
               

               Cow position:
               
               

               Alignm length:
               375
               

               Alignm identity:
               282
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               97, 246
               

               Conread position:
               1-358
               

               Cow position:
               
               

               Alignm length:
               374
               

               Alignm identity:
               274
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               94, 175
               

               Conread position:
               1-399
               

               Cow position:
               
               

               Alignm length:
               417
               

               Alignm identity:
               306
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               89, 243
               

               Conread position:
               1-409
               

               Cow position:
               
               

               Alignm length:
               427
               

               Alignm identity:
               310
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               94, 46
               

               Conread position:
               1-416
               

               Cow position:
               
               

               Alignm length:
               432
               

               Alignm identity:
               316
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               94, 124
               

               Conread position:
               1-444
               

               Cow position:
               
               

               Alignm length:
               462
               

               Alignm identity:
               333
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               94, 243
               

               Conread position:
               1-531
               

               Cow position:
               
               

               Alignm length:
               550
               

               Alignm identity:
               401
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               93, 122
               

               Conread position:
               1-532
               

               Cow position:
               
               

               Alignm length:
               551
               

               Alignm identity:
               386
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               97, 243
               

               Conread position:
               1-615
               

               Cow position:
               
               

               Alignm length:
               642
               

               Alignm identity:
               455
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               97, 124
               

               Conread position:
               1-693
               

               Cow position:
               
               

               Alignm length:
               710
               

               Alignm identity:
               537
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               96, 178
               

               Conread position:
               1-697
               

               Cow position:
               
               

               Alignm length:
               715
               

               Alignm identity:
               517
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               97, 243
               

               Conread position:
               1-697
               

               Cow position:
               
               

               Alignm length:
               714
               

               Alignm identity:
               515
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               97, 245
               

               Conread position:
               1-697
               

               Cow position:
               
               

               Alignm length:
               716
               

               Alignm identity:
               521
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               94, 243
               

               Conread position:
               1-697
               

               Cow position:
               
               

               Alignm length:
               715
               

               Alignm identity:
               515
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               94, 242
               

               Conread position:
               1-697
               

               Cow position:
               
               

               Alignm length:
               717
               

               Alignm identity:
               526
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               94, 22
               

               Conread position:
               1-697
               

               Cow position:
               
               

               Alignm length:
               708
               

               Alignm identity:
               509
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               125, 96
               

               Conread position:
               1-697
               

               Cow position:
               
               

               Alignm length:
               718
               

               Alignm identity:
               521
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               97, 245
               

               Conread position:
               1-697
               

               Cow position:
               
               

               Alignm length:
               714
               

               Alignm identity:
               512
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               97, 243
               

               Conread position:
               1-697
               

               Cow position:
               
               

               Alignm length:
               721
               

               Alignm identity:
               526
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               94, 243
               

               Conread position:
               1-697
               

               Cow position:
               
               

               Alignm length:
               715
               

               Alignm identity:
               515
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               94, 36
               

               Conread position:
               1-697
               

               Cow position:
               
               

               Alignm length:
               716
               

               Alignm identity:
               508
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               24, 177
               

               Conread position:
               1-697
               

               Cow position:
               
               

               Alignm length:
               722
               

               Alignm identity:
               517
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               94, 240
               

               Conread position:
               1-697
               

               Cow position:
               
               

               Alignm length:
               715
               

               Alignm identity:
               506
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               95, 122
               

               Conread position:
               1-697
               

               Cow position:
               
               

               Alignm length:
               719
               

               Alignm identity:
               504
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               95, 230
               

               Conread position:
               1-697
               

               Cow position:
               
               

               Alignm length:
               720
               

               Alignm identity:
               507
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               94, 61
               

               Conread position:
               1-698
               

               Cow position:
               
               

               Alignm length:
               719
               

               Alignm identity:
               529
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               97, 124
               

               Conread position:
               1-701
               

               Cow position:
               
               

               Alignm length:
               714
               

               Alignm identity:
               536
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               94, 69
               

               Conread position:
               1-705
               

               Cow position:
               
               

               Alignm length:
               723
               

               Alignm identity:
               537
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               95, 122
               

               Conread position:
               1-705
               

               Cow position:
               
               

               Alignm length:
               733
               

               Alignm identity:
               542
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               70, 82
               

               Conread position:
               1-705
               

               Cow position:
               
               

               Alignm length:
               733
               

               Alignm identity:
               520
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               92, 123
               

               Conread position:
               1-705
               

               Cow position:
               
               

               Alignm length:
               724
               

               Alignm identity:
               533
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               16, 127
               

               Conread position:
               2-690
               

               Cow position:
               
               

               Alignm length:
               711
               

               Alignm identity:
               517
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               94, 39
               

               Conread position:
               3-379
               

               Cow position:
               
               

               Alignm length:
               395
               

               Alignm identity:
               293
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               56, 121
               

               Conread position:
               3-389
               

               Cow position:
               
               

               Alignm length:
               403
               

               Alignm identity:
               300
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               94, 120
               

               Conread position:
               3-590
               

               Cow position:
               
               

               Alignm length:
               626
               

               Alignm identity:
               456
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               95, 120
               

               Conread position:
               3-666
               

               Cow position:
               
               

               Alignm length:
               684
               

               Alignm identity:
               501
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               92, 120
               

               Conread position:
               3-685
               

               Cow position:
               
               

               Alignm length:
               711
               

               Alignm identity:
               525
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               95, 123
               

               Conread position:
               3-698
               

               Cow position:
               
               

               Alignm length:
               715
               

               Alignm identity:
               523
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               92, 173
               

               Conread position:
               3-701
               

               Cow position:
               
               

               Alignm length:
               728
               

               Alignm identity:
               547
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               92, 120
               

               Conread position:
               3-701
               

               Cow position:
               
               

               Alignm length:
               729
               

               Alignm identity:
               517
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               50, 125
               

               Conread position:
               3-701
               

               Cow position:
               
               

               Alignm length:
               727
               

               Alignm identity:
               543
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               95, 60
               

               Conread position:
               3-701
               

               Cow position:
               
               

               Alignm length:
               725
               

               Alignm identity:
               533
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               116, 29
               

               Conread position:
               3-701
               

               Cow position:
               
               

               Alignm length:
               723
               

               Alignm identity:
               526
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               95, 74
               

               Conread position:
               3-704
               

               Cow position:
               
               

               Alignm length:
               726
               

               Alignm identity:
               521
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               15, 371
               

               Conread position:
               3-705
               

               Cow position:
               
               

               Alignm length:
               723
               

               Alignm identity:
               522
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               92, 119
               

               Conread position:
               3-705
               

               Cow position:
               
               

               Alignm length:
               716
               

               Alignm identity:
               509
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               92, 237
               

               Conread position:
               3-705
               

               Cow position:
               
               

               Alignm length:
               720
               

               Alignm identity:
               531
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               92, 238
               

               Conread position:
               3-705
               

               Cow position:
               
               

               Alignm length:
               719
               

               Alignm identity:
               521
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               92, 59
               

               Conread position:
               3-705
               

               Cow position:
               
               

               Alignm length:
               727
               

               Alignm identity:
               525
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               93, 120
               

               Conread position:
               3-705
               

               Cow position:
               
               

               Alignm length:
               722
               

               Alignm identity:
               534
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               94, 120
               

               Conread position:
               3-705
               

               Cow position:
               
               

               Alignm length:
               712
               

               Alignm identity:
               522
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               94, 120
               

               Conread position:
               3-705
               

               Cow position:
               
               

               Alignm length:
               721
               

               Alignm identity:
               512
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               95, 122
               

               Conread position:
               3-705
               

               Cow position:
               
               

               Alignm length:
               725
               

               Alignm identity:
               532
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               140, 94
               

               Conread position:
               3-706
               

               Cow position:
               
               

               Alignm length:
               743
               

               Alignm identity:
               510
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               92, 83
               

               Conread position:
               3-706
               

               Cow position:
               
               

               Alignm length:
               732
               

               Alignm identity:
               498
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               93, 60
               

               Conread position:
               3-708
               

               Cow position:
               
               

               Alignm length:
               735
               

               Alignm identity:
               523
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               6, 200
               

               Conread position:
               4-354
               

               Cow position:
               
               

               Alignm length:
               367
               

               Alignm identity:
               277
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               91, 241
               

               Conread position:
               5-587
               

               Cow position:
               
               

               Alignm length:
               587
               

               Alignm identity:
               407
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               148, 65
               

               Conread position:
               5-705
               

               Cow position:
               
               

               Alignm length:
               721
               

               Alignm identity:
               526
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               133, 73
               

               Conread position:
               7-705
               

               Cow position:
               
               

               Alignm length:
               725
               

               Alignm identity:
               524
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               136, 57
               

               Conread position:
               10-495
               

               Cow position:
               
               

               Alignm length:
               502
               

               Alignm identity:
               366
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               85, 40
               

               Conread position:
               11-695
               

               Cow position:
               
               

               Alignm length:
               706
               

               Alignm identity:
               476
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               76, 45
               

               Conread position:
               14-241
               

               Cow position:
               
               

               Alignm length:
               244
               

               Alignm identity:
               169
               

               Alignm E-value:
               2e-23
               

               Alignm gaps (pig, cow):
               81, 210
               

               Conread position:
               14-697
               

               Cow position:
               
               

               Alignm length:
               696
               

               Alignm identity:
               497
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               84, 109
               

               Conread position:
               15-697
               

               Cow position:
               
               

               Alignm length:
               697
               

               Alignm identity:
               493
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               80, 108
               

               Conread position:
               16-706
               

               Cow position:
               
               

               Alignm length:
               715
               

               Alignm identity:
               478
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               80, 231
               

               Conread position:
               17-706
               

               Cow position:
               
               

               Alignm length:
               707
               

               Alignm identity:
               503
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               78, 227
               

               Conread position:
               35-697
               

               Cow position:
               
               

               Alignm length:
               688
               

               Alignm identity:
               503
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               63, 211
               

               Conread position:
               48-322
               

               Cow position:
               
               

               Alignm length:
               289
               

               Alignm identity:
               203
               

               Alignm E-value:
               2e-33
               

               Alignm gaps (pig, cow):
               47, 160
               

               Conread position:
               137-705
               

               Cow position:
               
               

               Alignm length:
               576
               

               Alignm identity:
               432
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               86, 52
               

               Conread position:
               146-673
               

               Cow position:
               
               

               Alignm length:
               540
               

               Alignm identity:
               369
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               308, 87
               

               Conread position:
               221-696
               

               Cow position:
               
               

               Alignm length:
               487
               

               Alignm identity:
               330
               

               Alignm E-value:
               5e-40
               

               Alignm gaps (pig, cow):
               104, 35
               

               Conread position:
               310-697
               

               Cow position:
               
               

               Alignm length:
               390
               

               Alignm identity:
               275
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               22, 81
               

               Conread position:
               407-637
               

               Cow position:
               
               

               Alignm length:
               243
               

               Alignm identity:
               171
               

               Alignm E-value:
               3e-26
               

               Alignm gaps (pig, cow):
               54, 109
               

               Conread position:
               429-693
               

               Cow position:
               
               

               Alignm length:
               274
               

               Alignm identity:
               189
               

               Alignm E-value:
               4e-29
               

               Alignm gaps (pig, cow):
               56, 36
               
Show alignments to all cow chromosomes.