Cow genome map
| Conread name: | Utr1-UTR01H020100 |
| Conread position: | 1-126 |
| Cow position: | chr4:13548383-13548509 (view UCSC Genome Browser custom track) |
| Alignm length: | 128 |
| Alignm identity: | 103 |
| Alignm E-value: | 2e-25 |
| Alignm gaps (pig, cow): | 94, 122 |
| Conread position: | 1-157 |
| Cow position: | chr4:100579-100424 (view UCSC Genome Browser custom track) |
| Alignm length: | 158 |
| Alignm identity: | 121 |
| Alignm E-value: | 9e-28 |
| Alignm gaps (pig, cow): | 97, 113 |
| Conread position: | 1-212 |
| Cow position: | chr4:41954825-41955040 (view UCSC Genome Browser custom track) |
| Alignm length: | 216 |
| Alignm identity: | 154 |
| Alignm E-value: | 1e-30 |
| Alignm gaps (pig, cow): | 97, 0 |
| Conread position: | 1-212 |
| Cow position: | chr4:41958480-41958705 (view UCSC Genome Browser custom track) |
| Alignm length: | 226 |
| Alignm identity: | 172 |
| Alignm E-value: | 7e-36 |
| Alignm gaps (pig, cow): | 97, 0 |
| Conread position: | 1-224 |
| Cow position: | chr4:16326420-16326183 (view UCSC Genome Browser custom track) |
| Alignm length: | 238 |
| Alignm identity: | 178 |
| Alignm E-value: | 9e-38 |
| Alignm gaps (pig, cow): | 94, 0 |
| Conread position: | 1-346 |
| Cow position: | chr4:29531525-29531170 (view UCSC Genome Browser custom track) |
| Alignm length: | 362 |
| Alignm identity: | 267 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 96, 122 |
| Conread position: | 1-599 |
| Cow position: | chr4:13870371-13870959 (view UCSC Genome Browser custom track) |
| Alignm length: | 617 |
| Alignm identity: | 408 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 95, 199 |
| Conread position: | 1-676 |
| Cow position: | chr4:27334063-27334740 (view UCSC Genome Browser custom track) |
| Alignm length: | 699 |
| Alignm identity: | 498 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 31, 234 |
| Conread position: | 1-686 |
| Cow position: | chr4:4416429-4417101 (view UCSC Genome Browser custom track) |
| Alignm length: | 701 |
| Alignm identity: | 505 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 120, 80 |
| Conread position: | 1-696 |
| Cow position: | chr4:18424170-18423469 (view UCSC Genome Browser custom track) |
| Alignm length: | 728 |
| Alignm identity: | 527 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 97, 9 |
| Conread position: | 1-697 |
| Cow position: | chr4:159508-160208 (view UCSC Genome Browser custom track) |
| Alignm length: | 718 |
| Alignm identity: | 516 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 37, 247 |
| Conread position: | 1-697 |
| Cow position: | chr4:529754-530453 (view UCSC Genome Browser custom track) |
| Alignm length: | 724 |
| Alignm identity: | 524 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 97, 239 |
| Conread position: | 1-697 |
| Cow position: | chr4:1930273-1929587 (view UCSC Genome Browser custom track) |
| Alignm length: | 725 |
| Alignm identity: | 528 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 122, 60 |
| Conread position: | 1-697 |
| Cow position: | chr4:5880520-5881212 (view UCSC Genome Browser custom track) |
| Alignm length: | 712 |
| Alignm identity: | 508 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 94, 239 |
| Conread position: | 1-697 |
| Cow position: | chr4:17093511-17092814 (view UCSC Genome Browser custom track) |
| Alignm length: | 725 |
| Alignm identity: | 519 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 97, 111 |
| Conread position: | 1-697 |
| Cow position: | chr4:32212522-32213218 (view UCSC Genome Browser custom track) |
| Alignm length: | 716 |
| Alignm identity: | 521 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 97, 398 |
| Conread position: | 1-698 |
| Cow position: | chr4:6490008-6489303 (view UCSC Genome Browser custom track) |
| Alignm length: | 721 |
| Alignm identity: | 530 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 97, 112 |
| Conread position: | 1-704 |
| Cow position: | chr4:61694176-61693459 (view UCSC Genome Browser custom track) |
| Alignm length: | 733 |
| Alignm identity: | 501 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 94, 121 |
| Conread position: | 1-705 |
| Cow position: | chr4:46664876-46665593 (view UCSC Genome Browser custom track) |
| Alignm length: | 733 |
| Alignm identity: | 527 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 96, 122 |
| Conread position: | 2-119 |
| Cow position: | chr4:16056955-16057074 (view UCSC Genome Browser custom track) |
| Alignm length: | 120 |
| Alignm identity: | 95 |
| Alignm E-value: | 2e-22 |
| Alignm gaps (pig, cow): | 93, 0 |
| Conread position: | 2-697 |
| Cow position: | chr4:603370-604068 (view UCSC Genome Browser custom track) |
| Alignm length: | 715 |
| Alignm identity: | 512 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 93, 242 |
| Conread position: | 2-697 |
| Cow position: | chr4:18337218-18337902 (view UCSC Genome Browser custom track) |
| Alignm length: | 712 |
| Alignm identity: | 500 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 96, 242 |
| Conread position: | 2-707 |
| Cow position: | chr4:60263807-60263091 (view UCSC Genome Browser custom track) |
| Alignm length: | 731 |
| Alignm identity: | 525 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 93, 121 |
| Conread position: | 3-157 |
| Cow position: | chr4:17540113-17539959 (view UCSC Genome Browser custom track) |
| Alignm length: | 157 |
| Alignm identity: | 119 |
| Alignm E-value: | 3e-26 |
| Alignm gaps (pig, cow): | 92, 116 |
| Conread position: | 3-457 |
| Cow position: | chr4:18517255-18517724 (view UCSC Genome Browser custom track) |
| Alignm length: | 474 |
| Alignm identity: | 345 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 92, 120 |
| Conread position: | 3-487 |
| Cow position: | chr4:31669632-31670122 (view UCSC Genome Browser custom track) |
| Alignm length: | 502 |
| Alignm identity: | 366 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 91, 120 |
| Conread position: | 3-616 |
| Cow position: | chr4:20604087-20604701 (view UCSC Genome Browser custom track) |
| Alignm length: | 627 |
| Alignm identity: | 415 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 92, 35 |
| Conread position: | 3-686 |
| Cow position: | chr4:12587694-12588374 (view UCSC Genome Browser custom track) |
| Alignm length: | 700 |
| Alignm identity: | 509 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 140, 94 |
| Conread position: | 3-698 |
| Cow position: | chr4:12240852-12240165 (view UCSC Genome Browser custom track) |
| Alignm length: | 714 |
| Alignm identity: | 513 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 92, 79 |
| Conread position: | 3-698 |
| Cow position: | chr4:41333069-41333740 (view UCSC Genome Browser custom track) |
| Alignm length: | 712 |
| Alignm identity: | 522 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 92, 120 |
| Conread position: | 3-701 |
| Cow position: | chr4:356266-356960 (view UCSC Genome Browser custom track) |
| Alignm length: | 728 |
| Alignm identity: | 528 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 95, 117 |
| Conread position: | 3-701 |
| Cow position: | chr4:25599139-25598433 (view UCSC Genome Browser custom track) |
| Alignm length: | 726 |
| Alignm identity: | 530 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 92, 120 |
| Conread position: | 3-701 |
| Cow position: | chr4:33072464-33071769 (view UCSC Genome Browser custom track) |
| Alignm length: | 720 |
| Alignm identity: | 537 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 57, 61 |
| Conread position: | 3-701 |
| Cow position: | chr4:43881462-43882162 (view UCSC Genome Browser custom track) |
| Alignm length: | 716 |
| Alignm identity: | 528 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 92, 242 |
| Conread position: | 3-701 |
| Cow position: | chr4:57984344-57985044 (view UCSC Genome Browser custom track) |
| Alignm length: | 721 |
| Alignm identity: | 538 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 95, 117 |
| Conread position: | 3-705 |
| Cow position: | chr4:13493675-13494386 (view UCSC Genome Browser custom track) |
| Alignm length: | 731 |
| Alignm identity: | 546 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 95, 245 |
| Conread position: | 3-705 |
| Cow position: | chr4:36896729-36897436 (view UCSC Genome Browser custom track) |
| Alignm length: | 722 |
| Alignm identity: | 536 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 92, 120 |
| Conread position: | 3-705 |
| Cow position: | chr4:43319283-43318578 (view UCSC Genome Browser custom track) |
| Alignm length: | 723 |
| Alignm identity: | 539 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 92, 45 |
| Conread position: | 5-658 |
| Cow position: | chr4:31564945-31564289 (view UCSC Genome Browser custom track) |
| Alignm length: | 670 |
| Alignm identity: | 491 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 90, 118 |
| Conread position: | 6-389 |
| Cow position: | chr4:18190754-18191152 (view UCSC Genome Browser custom track) |
| Alignm length: | 400 |
| Alignm identity: | 291 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 89, 238 |
| Conread position: | 8-461 |
| Cow position: | chr4:48026764-48027221 (view UCSC Genome Browser custom track) |
| Alignm length: | 471 |
| Alignm identity: | 344 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 87, 115 |
| Conread position: | 8-697 |
| Cow position: | chr4:10881909-10882602 (view UCSC Genome Browser custom track) |
| Alignm length: | 709 |
| Alignm identity: | 517 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 87, 115 |
| Conread position: | 13-697 |
| Cow position: | chr4:3126158-3126858 (view UCSC Genome Browser custom track) |
| Alignm length: | 718 |
| Alignm identity: | 520 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 85, 233 |
| Conread position: | 19-691 |
| Cow position: | chr4:494208-493555 (view UCSC Genome Browser custom track) |
| Alignm length: | 690 |
| Alignm identity: | 427 |
| Alignm E-value: | 8e-27 |
| Alignm gaps (pig, cow): | 67, 103 |
| Conread position: | 22-705 |
| Cow position: | chr4:17925583-17924905 (view UCSC Genome Browser custom track) |
| Alignm length: | 708 |
| Alignm identity: | 515 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 76, 156 |
| Conread position: | 73-690 |
| Cow position: | chr4:44726023-44726638 (view UCSC Genome Browser custom track) |
| Alignm length: | 642 |
| Alignm identity: | 460 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 25, 52 |
| Conread position: | 94-697 |
| Cow position: | chr4:5444387-5443778 (view UCSC Genome Browser custom track) |
| Alignm length: | 630 |
| Alignm identity: | 459 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 29, 145 |
| Conread position: | 130-698 |
| Cow position: | chr4:45298587-45298047 (view UCSC Genome Browser custom track) |
| Alignm length: | 573 |
| Alignm identity: | 396 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 96, 6 |
| Conread position: | 138-701 |
| Cow position: | chr4:16639116-16639668 (view UCSC Genome Browser custom track) |
| Alignm length: | 569 |
| Alignm identity: | 427 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 88, 93 |
| Conread position: | 138-706 |
| Cow position: | chr4:14775947-14776521 (view UCSC Genome Browser custom track) |
| Alignm length: | 598 |
| Alignm identity: | 394 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 89, 257 |
| Conread position: | 177-659 |
| Cow position: | chr4:49716220-49716688 (view UCSC Genome Browser custom track) |
| Alignm length: | 492 |
| Alignm identity: | 355 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 50, 57 |
| Conread position: | 196-695 |
| Cow position: | chr4:28148959-28149464 (view UCSC Genome Browser custom track) |
| Alignm length: | 519 |
| Alignm identity: | 316 |
| Alignm E-value: | 2.00386e-43 |
| Alignm gaps (pig, cow): | 9, 288 |
| Conread position: | 230-706 |
| Cow position: | chr4:50975230-50975686 (view UCSC Genome Browser custom track) |
| Alignm length: | 480 |
| Alignm identity: | 336 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 95, 154 |
| Conread position: | 388-706 |
| Cow position: | chr4:34178501-34178170 (view UCSC Genome Browser custom track) |
| Alignm length: | 338 |
| Alignm identity: | 248 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 74, 153 |
| Conread position: | 399-705 |
| Cow position: | chr4:26877033-26876717 (view UCSC Genome Browser custom track) |
| Alignm length: | 320 |
| Alignm identity: | 243 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 63, 143 |
| Conread position: | 412-686 |
| Cow position: | chr4:27300722-27300444 (view UCSC Genome Browser custom track) |
| Alignm length: | 285 |
| Alignm identity: | 207 |
| Alignm E-value: | 9.99995e-41 |
| Alignm gaps (pig, cow): | 51, 128 |
| Conread position: | 426-706 |
| Cow position: | chr4:4178043-4178312 (view UCSC Genome Browser custom track) |
| Alignm length: | 284 |
| Alignm identity: | 209 |
| Alignm E-value: | 9.99995e-41 |
| Alignm gaps (pig, cow): | 37, 50 |
Show alignments to all cow chromosomes.