Cow genome map

Conread name: Utr1-UTR01H020100

Conread position: 1-126
Cow position:
Alignm length: 128
Alignm identity: 103
Alignm E-value: 2e-25
Alignm gaps (pig, cow): 94, 122

Conread position: 1-157
Cow position:
Alignm length: 158
Alignm identity: 121
Alignm E-value: 9e-28
Alignm gaps (pig, cow): 97, 113

Conread position: 1-212
Cow position:
Alignm length: 216
Alignm identity: 154
Alignm E-value: 1e-30
Alignm gaps (pig, cow): 97, 0

Conread position: 1-212
Cow position:
Alignm length: 226
Alignm identity: 172
Alignm E-value: 7e-36
Alignm gaps (pig, cow): 97, 0

Conread position: 1-224
Cow position:
Alignm length: 238
Alignm identity: 178
Alignm E-value: 9e-38
Alignm gaps (pig, cow): 94, 0

Conread position: 1-346
Cow position:
Alignm length: 362
Alignm identity: 267
Alignm E-value: 0
Alignm gaps (pig, cow): 96, 122

Conread position: 1-599
Cow position:
Alignm length: 617
Alignm identity: 408
Alignm E-value: 0
Alignm gaps (pig, cow): 95, 199

Conread position: 1-676
Cow position:
Alignm length: 699
Alignm identity: 498
Alignm E-value: 0
Alignm gaps (pig, cow): 31, 234

Conread position: 1-686
Cow position:
Alignm length: 701
Alignm identity: 505
Alignm E-value: 0
Alignm gaps (pig, cow): 120, 80

Conread position: 1-696
Cow position:
Alignm length: 728
Alignm identity: 527
Alignm E-value: 0
Alignm gaps (pig, cow): 97, 9

Conread position: 1-697
Cow position:
Alignm length: 718
Alignm identity: 516
Alignm E-value: 0
Alignm gaps (pig, cow): 37, 247

Conread position: 1-697
Cow position:
Alignm length: 724
Alignm identity: 524
Alignm E-value: 0
Alignm gaps (pig, cow): 97, 239

Conread position: 1-697
Cow position:
Alignm length: 725
Alignm identity: 528
Alignm E-value: 0
Alignm gaps (pig, cow): 122, 60

Conread position: 1-697
Cow position:
Alignm length: 712
Alignm identity: 508
Alignm E-value: 0
Alignm gaps (pig, cow): 94, 239

Conread position: 1-697
Cow position:
Alignm length: 725
Alignm identity: 519
Alignm E-value: 0
Alignm gaps (pig, cow): 97, 111

Conread position: 1-697
Cow position:
Alignm length: 716
Alignm identity: 521
Alignm E-value: 0
Alignm gaps (pig, cow): 97, 398

Conread position: 1-698
Cow position:
Alignm length: 721
Alignm identity: 530
Alignm E-value: 0
Alignm gaps (pig, cow): 97, 112

Conread position: 1-704
Cow position:
Alignm length: 733
Alignm identity: 501
Alignm E-value: 0
Alignm gaps (pig, cow): 94, 121

Conread position: 1-705
Cow position:
Alignm length: 733
Alignm identity: 527
Alignm E-value: 0
Alignm gaps (pig, cow): 96, 122

Conread position: 2-119
Cow position:
Alignm length: 120
Alignm identity: 95
Alignm E-value: 2e-22
Alignm gaps (pig, cow): 93, 0

Conread position: 2-697
Cow position:
Alignm length: 715
Alignm identity: 512
Alignm E-value: 0
Alignm gaps (pig, cow): 93, 242

Conread position: 2-697
Cow position:
Alignm length: 712
Alignm identity: 500
Alignm E-value: 0
Alignm gaps (pig, cow): 96, 242

Conread position: 2-707
Cow position:
Alignm length: 731
Alignm identity: 525
Alignm E-value: 0
Alignm gaps (pig, cow): 93, 121

Conread position: 3-157
Cow position:
Alignm length: 157
Alignm identity: 119
Alignm E-value: 3e-26
Alignm gaps (pig, cow): 92, 116

Conread position: 3-457
Cow position:
Alignm length: 474
Alignm identity: 345
Alignm E-value: 0
Alignm gaps (pig, cow): 92, 120

Conread position: 3-487
Cow position:
Alignm length: 502
Alignm identity: 366
Alignm E-value: 0
Alignm gaps (pig, cow): 91, 120

Conread position: 3-616
Cow position:
Alignm length: 627
Alignm identity: 415
Alignm E-value: 0
Alignm gaps (pig, cow): 92, 35

Conread position: 3-686
Cow position:
Alignm length: 700
Alignm identity: 509
Alignm E-value: 0
Alignm gaps (pig, cow): 140, 94

Conread position: 3-698
Cow position:
Alignm length: 714
Alignm identity: 513
Alignm E-value: 0
Alignm gaps (pig, cow): 92, 79

Conread position: 3-698
Cow position:
Alignm length: 712
Alignm identity: 522
Alignm E-value: 0
Alignm gaps (pig, cow): 92, 120

Conread position: 3-701
Cow position:
Alignm length: 728
Alignm identity: 528
Alignm E-value: 0
Alignm gaps (pig, cow): 95, 117

Conread position: 3-701
Cow position:
Alignm length: 726
Alignm identity: 530
Alignm E-value: 0
Alignm gaps (pig, cow): 92, 120

Conread position: 3-701
Cow position:
Alignm length: 720
Alignm identity: 537
Alignm E-value: 0
Alignm gaps (pig, cow): 57, 61

Conread position: 3-701
Cow position:
Alignm length: 716
Alignm identity: 528
Alignm E-value: 0
Alignm gaps (pig, cow): 92, 242

Conread position: 3-701
Cow position:
Alignm length: 721
Alignm identity: 538
Alignm E-value: 0
Alignm gaps (pig, cow): 95, 117

Conread position: 3-705
Cow position:
Alignm length: 731
Alignm identity: 546
Alignm E-value: 0
Alignm gaps (pig, cow): 95, 245

Conread position: 3-705
Cow position:
Alignm length: 722
Alignm identity: 536
Alignm E-value: 0
Alignm gaps (pig, cow): 92, 120

Conread position: 3-705
Cow position:
Alignm length: 723
Alignm identity: 539
Alignm E-value: 0
Alignm gaps (pig, cow): 92, 45

Conread position: 5-658
Cow position:
Alignm length: 670
Alignm identity: 491
Alignm E-value: 0
Alignm gaps (pig, cow): 90, 118

Conread position: 6-389
Cow position:
Alignm length: 400
Alignm identity: 291
Alignm E-value: 0
Alignm gaps (pig, cow): 89, 238

Conread position: 8-461
Cow position:
Alignm length: 471
Alignm identity: 344
Alignm E-value: 0
Alignm gaps (pig, cow): 87, 115

Conread position: 8-697
Cow position:
Alignm length: 709
Alignm identity: 517
Alignm E-value: 0
Alignm gaps (pig, cow): 87, 115

Conread position: 13-697
Cow position:
Alignm length: 718
Alignm identity: 520
Alignm E-value: 0
Alignm gaps (pig, cow): 85, 233

Conread position: 19-691
Cow position:
Alignm length: 690
Alignm identity: 427
Alignm E-value: 8e-27
Alignm gaps (pig, cow): 67, 103

Conread position: 22-705
Cow position:
Alignm length: 708
Alignm identity: 515
Alignm E-value: 0
Alignm gaps (pig, cow): 76, 156

Conread position: 73-690
Cow position:
Alignm length: 642
Alignm identity: 460
Alignm E-value: 0
Alignm gaps (pig, cow): 25, 52

Conread position: 94-697
Cow position:
Alignm length: 630
Alignm identity: 459
Alignm E-value: 0
Alignm gaps (pig, cow): 29, 145

Conread position: 130-698
Cow position:
Alignm length: 573
Alignm identity: 396
Alignm E-value: 0
Alignm gaps (pig, cow): 96, 6

Conread position: 138-701
Cow position:
Alignm length: 569
Alignm identity: 427
Alignm E-value: 0
Alignm gaps (pig, cow): 88, 93

Conread position: 138-706
Cow position:
Alignm length: 598
Alignm identity: 394
Alignm E-value: 0
Alignm gaps (pig, cow): 89, 257

Conread position: 177-659
Cow position:
Alignm length: 492
Alignm identity: 355
Alignm E-value: 0
Alignm gaps (pig, cow): 50, 57

Conread position: 196-695
Cow position:
Alignm length: 519
Alignm identity: 316
Alignm E-value: 2.00386e-43
Alignm gaps (pig, cow): 9, 288

Conread position: 230-706
Cow position:
Alignm length: 480
Alignm identity: 336
Alignm E-value: 0
Alignm gaps (pig, cow): 95, 154

Conread position: 388-706
Cow position:
Alignm length: 338
Alignm identity: 248
Alignm E-value: 0
Alignm gaps (pig, cow): 74, 153

Conread position: 399-705
Cow position:
Alignm length: 320
Alignm identity: 243
Alignm E-value: 0
Alignm gaps (pig, cow): 63, 143

Conread position: 412-686
Cow position:
Alignm length: 285
Alignm identity: 207
Alignm E-value: 9.99995e-41
Alignm gaps (pig, cow): 51, 128

Conread position: 426-706
Cow position:
Alignm length: 284
Alignm identity: 209
Alignm E-value: 9.99995e-41
Alignm gaps (pig, cow): 37, 50

Show alignments to all cow chromosomes.