Cow genome map

Conread name: Utr1-UTR01H020100

Conread position: 1-157
Cow position:
Alignm length: 159
Alignm identity: 121
Alignm E-value: 1e-27
Alignm gaps (pig, cow): 94, 122

Conread position: 1-157
Cow position:
Alignm length: 159
Alignm identity: 122
Alignm E-value: 1e-28
Alignm gaps (pig, cow): 94, 122

Conread position: 1-215
Cow position:
Alignm length: 229
Alignm identity: 170
Alignm E-value: 2e-34
Alignm gaps (pig, cow): 94, 0

Conread position: 1-224
Cow position:
Alignm length: 236
Alignm identity: 179
Alignm E-value: 4.00001e-40
Alignm gaps (pig, cow): 118, 96

Conread position: 1-322
Cow position:
Alignm length: 337
Alignm identity: 258
Alignm E-value: 0
Alignm gaps (pig, cow): 94, 243

Conread position: 1-358
Cow position:
Alignm length: 372
Alignm identity: 276
Alignm E-value: 0
Alignm gaps (pig, cow): 118, 93

Conread position: 1-448
Cow position:
Alignm length: 461
Alignm identity: 346
Alignm E-value: 0
Alignm gaps (pig, cow): 94, 121

Conread position: 1-523
Cow position:
Alignm length: 541
Alignm identity: 387
Alignm E-value: 0
Alignm gaps (pig, cow): 94, 243

Conread position: 1-558
Cow position:
Alignm length: 574
Alignm identity: 407
Alignm E-value: 0
Alignm gaps (pig, cow): 94, 243

Conread position: 1-639
Cow position:
Alignm length: 659
Alignm identity: 453
Alignm E-value: 0
Alignm gaps (pig, cow): 97, 9

Conread position: 1-665
Cow position:
Alignm length: 688
Alignm identity: 459
Alignm E-value: 0
Alignm gaps (pig, cow): 30, 135

Conread position: 1-674
Cow position:
Alignm length: 702
Alignm identity: 500
Alignm E-value: 0
Alignm gaps (pig, cow): 94, 87

Conread position: 1-690
Cow position:
Alignm length: 706
Alignm identity: 498
Alignm E-value: 0
Alignm gaps (pig, cow): 97, 240

Conread position: 1-696
Cow position:
Alignm length: 711
Alignm identity: 485
Alignm E-value: 0
Alignm gaps (pig, cow): 95, 124

Conread position: 1-697
Cow position:
Alignm length: 721
Alignm identity: 516
Alignm E-value: 0
Alignm gaps (pig, cow): 86, 94

Conread position: 1-697
Cow position:
Alignm length: 721
Alignm identity: 507
Alignm E-value: 0
Alignm gaps (pig, cow): 11, 244

Conread position: 1-697
Cow position:
Alignm length: 717
Alignm identity: 511
Alignm E-value: 0
Alignm gaps (pig, cow): 96, 214

Conread position: 1-697
Cow position:
Alignm length: 719
Alignm identity: 509
Alignm E-value: 0
Alignm gaps (pig, cow): 94, 243

Conread position: 1-697
Cow position:
Alignm length: 715
Alignm identity: 515
Alignm E-value: 0
Alignm gaps (pig, cow): 96, 243

Conread position: 1-697
Cow position:
Alignm length: 722
Alignm identity: 516
Alignm E-value: 0
Alignm gaps (pig, cow): 94, 229

Conread position: 1-697
Cow position:
Alignm length: 718
Alignm identity: 507
Alignm E-value: 0
Alignm gaps (pig, cow): 94, 122

Conread position: 1-697
Cow position:
Alignm length: 715
Alignm identity: 520
Alignm E-value: 0
Alignm gaps (pig, cow): 94, 243

Conread position: 1-697
Cow position:
Alignm length: 714
Alignm identity: 510
Alignm E-value: 0
Alignm gaps (pig, cow): 94, 243

Conread position: 1-697
Cow position:
Alignm length: 710
Alignm identity: 482
Alignm E-value: 0
Alignm gaps (pig, cow): 94, 43

Conread position: 1-697
Cow position:
Alignm length: 731
Alignm identity: 523
Alignm E-value: 0
Alignm gaps (pig, cow): 94, 243

Conread position: 1-702
Cow position:
Alignm length: 725
Alignm identity: 529
Alignm E-value: 0
Alignm gaps (pig, cow): 24, 246

Conread position: 1-703
Cow position:
Alignm length: 736
Alignm identity: 524
Alignm E-value: 0
Alignm gaps (pig, cow): 97, 124

Conread position: 1-705
Cow position:
Alignm length: 731
Alignm identity: 552
Alignm E-value: 0
Alignm gaps (pig, cow): 97, 122

Conread position: 1-705
Cow position:
Alignm length: 734
Alignm identity: 556
Alignm E-value: 0
Alignm gaps (pig, cow): 97, 124

Conread position: 1-706
Cow position:
Alignm length: 725
Alignm identity: 514
Alignm E-value: 0
Alignm gaps (pig, cow): 94, 230

Conread position: 1-708
Cow position:
Alignm length: 748
Alignm identity: 495
Alignm E-value: 0
Alignm gaps (pig, cow): 95, 405

Conread position: 2-215
Cow position:
Alignm length: 227
Alignm identity: 172
Alignm E-value: 3e-37
Alignm gaps (pig, cow): 141, 95

Conread position: 2-385
Cow position:
Alignm length: 397
Alignm identity: 297
Alignm E-value: 0
Alignm gaps (pig, cow): 116, 73

Conread position: 2-697
Cow position:
Alignm length: 723
Alignm identity: 528
Alignm E-value: 0
Alignm gaps (pig, cow): 96, 396

Conread position: 2-697
Cow position:
Alignm length: 712
Alignm identity: 515
Alignm E-value: 0
Alignm gaps (pig, cow): 93, 392

Conread position: 3-157
Cow position:
Alignm length: 157
Alignm identity: 114
Alignm E-value: 5e-21
Alignm gaps (pig, cow): 92, 123

Conread position: 3-223
Cow position:
Alignm length: 235
Alignm identity: 170
Alignm E-value: 2e-31
Alignm gaps (pig, cow): 92, 120

Conread position: 3-330
Cow position:
Alignm length: 343
Alignm identity: 253
Alignm E-value: 0
Alignm gaps (pig, cow): 92, 241

Conread position: 3-598
Cow position:
Alignm length: 612
Alignm identity: 434
Alignm E-value: 0
Alignm gaps (pig, cow): 92, 241

Conread position: 3-658
Cow position:
Alignm length: 676
Alignm identity: 494
Alignm E-value: 0
Alignm gaps (pig, cow): 92, 120

Conread position: 3-688
Cow position:
Alignm length: 715
Alignm identity: 499
Alignm E-value: 0
Alignm gaps (pig, cow): 92, 120

Conread position: 3-697
Cow position:
Alignm length: 725
Alignm identity: 515
Alignm E-value: 0
Alignm gaps (pig, cow): 95, 38

Conread position: 3-697
Cow position:
Alignm length: 715
Alignm identity: 527
Alignm E-value: 0
Alignm gaps (pig, cow): 92, 120

Conread position: 3-701
Cow position:
Alignm length: 720
Alignm identity: 520
Alignm E-value: 0
Alignm gaps (pig, cow): 92, 120

Conread position: 3-701
Cow position:
Alignm length: 730
Alignm identity: 524
Alignm E-value: 0
Alignm gaps (pig, cow): 92, 120

Conread position: 3-704
Cow position:
Alignm length: 722
Alignm identity: 525
Alignm E-value: 0
Alignm gaps (pig, cow): 92, 121

Conread position: 3-705
Cow position:
Alignm length: 730
Alignm identity: 539
Alignm E-value: 0
Alignm gaps (pig, cow): 92, 123

Conread position: 3-705
Cow position:
Alignm length: 722
Alignm identity: 520
Alignm E-value: 0
Alignm gaps (pig, cow): 92, 120

Conread position: 3-705
Cow position:
Alignm length: 719
Alignm identity: 514
Alignm E-value: 0
Alignm gaps (pig, cow): 92, 171

Conread position: 3-705
Cow position:
Alignm length: 740
Alignm identity: 543
Alignm E-value: 0
Alignm gaps (pig, cow): 67, 122

Conread position: 3-705
Cow position:
Alignm length: 721
Alignm identity: 534
Alignm E-value: 0
Alignm gaps (pig, cow): 92, 120

Conread position: 3-705
Cow position:
Alignm length: 720
Alignm identity: 512
Alignm E-value: 0
Alignm gaps (pig, cow): 92, 123

Conread position: 3-705
Cow position:
Alignm length: 720
Alignm identity: 513
Alignm E-value: 0
Alignm gaps (pig, cow): 92, 120

Conread position: 3-705
Cow position:
Alignm length: 729
Alignm identity: 536
Alignm E-value: 0
Alignm gaps (pig, cow): 92, 120

Conread position: 3-705
Cow position:
Alignm length: 722
Alignm identity: 531
Alignm E-value: 0
Alignm gaps (pig, cow): 92, 242

Conread position: 3-706
Cow position:
Alignm length: 726
Alignm identity: 524
Alignm E-value: 0
Alignm gaps (pig, cow): 92, 36

Conread position: 5-410
Cow position:
Alignm length: 420
Alignm identity: 284
Alignm E-value: 1.99965e-42
Alignm gaps (pig, cow): 90, 118

Conread position: 8-705
Cow position:
Alignm length: 722
Alignm identity: 530
Alignm E-value: 0
Alignm gaps (pig, cow): 87, 237

Conread position: 9-410
Cow position:
Alignm length: 413
Alignm identity: 296
Alignm E-value: 0
Alignm gaps (pig, cow): 121, 12

Conread position: 11-705
Cow position:
Alignm length: 716
Alignm identity: 530
Alignm E-value: 0
Alignm gaps (pig, cow): 84, 112

Conread position: 16-567
Cow position:
Alignm length: 571
Alignm identity: 395
Alignm E-value: 0
Alignm gaps (pig, cow): 79, 219

Conread position: 18-646
Cow position:
Alignm length: 649
Alignm identity: 439
Alignm E-value: 0
Alignm gaps (pig, cow): 77, 9

Conread position: 138-706
Cow position:
Alignm length: 583
Alignm identity: 403
Alignm E-value: 0
Alignm gaps (pig, cow): 18, 35

Conread position: 170-706
Cow position:
Alignm length: 556
Alignm identity: 391
Alignm E-value: 0
Alignm gaps (pig, cow): 63, 219

Conread position: 180-706
Cow position:
Alignm length: 542
Alignm identity: 391
Alignm E-value: 0
Alignm gaps (pig, cow): 37, 54

Conread position: 202-603
Cow position:
Alignm length: 408
Alignm identity: 293
Alignm E-value: 0
Alignm gaps (pig, cow): 24, 32

Conread position: 222-705
Cow position:
Alignm length: 498
Alignm identity: 363
Alignm E-value: 0
Alignm gaps (pig, cow): 110, 11

Conread position: 233-701
Cow position:
Alignm length: 482
Alignm identity: 341
Alignm E-value: 0
Alignm gaps (pig, cow): 153, 87

Conread position: 237-697
Cow position:
Alignm length: 478
Alignm identity: 340
Alignm E-value: 0
Alignm gaps (pig, cow): 99, 111

Conread position: 385-681
Cow position:
Alignm length: 311
Alignm identity: 219
Alignm E-value: 2e-32
Alignm gaps (pig, cow): 72, 127

Conread position: 389-697
Cow position:
Alignm length: 311
Alignm identity: 233
Alignm E-value: 0
Alignm gaps (pig, cow): 235, 27

Show alignments to all cow chromosomes.