Cow genome map

Conread name: Utr1-UTR01H020100

Conread position: 1-113
Cow position:
Alignm length: 115
Alignm identity: 91
Alignm E-value: 5e-21
Alignm gaps (pig, cow): 96, 0

Conread position: 1-140
Cow position:
Alignm length: 142
Alignm identity: 112
Alignm E-value: 3e-27
Alignm gaps (pig, cow): 96, 122

Conread position: 1-157
Cow position:
Alignm length: 159
Alignm identity: 120
Alignm E-value: 8e-27
Alignm gaps (pig, cow): 94, 122

Conread position: 1-157
Cow position:
Alignm length: 159
Alignm identity: 118
Alignm E-value: 7e-25
Alignm gaps (pig, cow): 95, 122

Conread position: 1-157
Cow position:
Alignm length: 159
Alignm identity: 121
Alignm E-value: 9e-28
Alignm gaps (pig, cow): 94, 122

Conread position: 1-157
Cow position:
Alignm length: 159
Alignm identity: 120
Alignm E-value: 8e-27
Alignm gaps (pig, cow): 94, 122

Conread position: 1-157
Cow position:
Alignm length: 157
Alignm identity: 120
Alignm E-value: 3e-28
Alignm gaps (pig, cow): 96, 0

Conread position: 1-157
Cow position:
Alignm length: 159
Alignm identity: 119
Alignm E-value: 8e-26
Alignm gaps (pig, cow): 94, 122

Conread position: 1-157
Cow position:
Alignm length: 159
Alignm identity: 119
Alignm E-value: 8e-26
Alignm gaps (pig, cow): 95, 122

Conread position: 1-206
Cow position:
Alignm length: 215
Alignm identity: 161
Alignm E-value: 5e-33
Alignm gaps (pig, cow): 97, 9

Conread position: 1-215
Cow position:
Alignm length: 229
Alignm identity: 174
Alignm E-value: 3e-38
Alignm gaps (pig, cow): 96, 0

Conread position: 1-380
Cow position:
Alignm length: 396
Alignm identity: 291
Alignm E-value: 0
Alignm gaps (pig, cow): 94, 212

Conread position: 1-385
Cow position:
Alignm length: 401
Alignm identity: 301
Alignm E-value: 0
Alignm gaps (pig, cow): 97, 242

Conread position: 1-391
Cow position:
Alignm length: 406
Alignm identity: 289
Alignm E-value: 0
Alignm gaps (pig, cow): 94, 51

Conread position: 1-393
Cow position:
Alignm length: 411
Alignm identity: 290
Alignm E-value: 0
Alignm gaps (pig, cow): 94, 0

Conread position: 1-411
Cow position:
Alignm length: 428
Alignm identity: 322
Alignm E-value: 0
Alignm gaps (pig, cow): 94, 122

Conread position: 1-460
Cow position:
Alignm length: 471
Alignm identity: 346
Alignm E-value: 0
Alignm gaps (pig, cow): 41, 242

Conread position: 1-467
Cow position:
Alignm length: 481
Alignm identity: 345
Alignm E-value: 0
Alignm gaps (pig, cow): 94, 240

Conread position: 1-506
Cow position:
Alignm length: 529
Alignm identity: 375
Alignm E-value: 0
Alignm gaps (pig, cow): 142, 69

Conread position: 1-559
Cow position:
Alignm length: 575
Alignm identity: 391
Alignm E-value: 0
Alignm gaps (pig, cow): 94, 123

Conread position: 1-653
Cow position:
Alignm length: 671
Alignm identity: 469
Alignm E-value: 0
Alignm gaps (pig, cow): 94, 243

Conread position: 1-669
Cow position:
Alignm length: 689
Alignm identity: 470
Alignm E-value: 0
Alignm gaps (pig, cow): 94, 9

Conread position: 1-676
Cow position:
Alignm length: 694
Alignm identity: 507
Alignm E-value: 0
Alignm gaps (pig, cow): 224, 48

Conread position: 1-695
Cow position:
Alignm length: 712
Alignm identity: 514
Alignm E-value: 0
Alignm gaps (pig, cow): 95, 122

Conread position: 1-697
Cow position:
Alignm length: 718
Alignm identity: 511
Alignm E-value: 0
Alignm gaps (pig, cow): 94, 180

Conread position: 1-697
Cow position:
Alignm length: 714
Alignm identity: 510
Alignm E-value: 0
Alignm gaps (pig, cow): 97, 37

Conread position: 1-697
Cow position:
Alignm length: 715
Alignm identity: 515
Alignm E-value: 0
Alignm gaps (pig, cow): 94, 51

Conread position: 1-697
Cow position:
Alignm length: 726
Alignm identity: 531
Alignm E-value: 0
Alignm gaps (pig, cow): 97, 240

Conread position: 1-697
Cow position:
Alignm length: 714
Alignm identity: 510
Alignm E-value: 0
Alignm gaps (pig, cow): 94, 243

Conread position: 1-697
Cow position:
Alignm length: 721
Alignm identity: 514
Alignm E-value: 0
Alignm gaps (pig, cow): 25, 249

Conread position: 1-697
Cow position:
Alignm length: 715
Alignm identity: 514
Alignm E-value: 0
Alignm gaps (pig, cow): 53, 41

Conread position: 1-697
Cow position:
Alignm length: 731
Alignm identity: 503
Alignm E-value: 0
Alignm gaps (pig, cow): 11, 244

Conread position: 1-703
Cow position:
Alignm length: 717
Alignm identity: 507
Alignm E-value: 0
Alignm gaps (pig, cow): 94, 116

Conread position: 1-703
Cow position:
Alignm length: 738
Alignm identity: 525
Alignm E-value: 0
Alignm gaps (pig, cow): 100, 123

Conread position: 1-705
Cow position:
Alignm length: 722
Alignm identity: 508
Alignm E-value: 0
Alignm gaps (pig, cow): 33, 126

Conread position: 1-705
Cow position:
Alignm length: 728
Alignm identity: 523
Alignm E-value: 0
Alignm gaps (pig, cow): 94, 107

Conread position: 2-703
Cow position:
Alignm length: 722
Alignm identity: 517
Alignm E-value: 0
Alignm gaps (pig, cow): 93, 242

Conread position: 3-117
Cow position:
Alignm length: 117
Alignm identity: 92
Alignm E-value: 5e-21
Alignm gaps (pig, cow): 93, 0

Conread position: 3-535
Cow position:
Alignm length: 550
Alignm identity: 381
Alignm E-value: 0
Alignm gaps (pig, cow): 92, 122

Conread position: 3-697
Cow position:
Alignm length: 723
Alignm identity: 529
Alignm E-value: 0
Alignm gaps (pig, cow): 92, 120

Conread position: 3-697
Cow position:
Alignm length: 714
Alignm identity: 508
Alignm E-value: 0
Alignm gaps (pig, cow): 117, 89

Conread position: 3-701
Cow position:
Alignm length: 733
Alignm identity: 542
Alignm E-value: 0
Alignm gaps (pig, cow): 92, 120

Conread position: 3-701
Cow position:
Alignm length: 723
Alignm identity: 530
Alignm E-value: 0
Alignm gaps (pig, cow): 94, 120

Conread position: 3-701
Cow position:
Alignm length: 727
Alignm identity: 549
Alignm E-value: 0
Alignm gaps (pig, cow): 95, 122

Conread position: 3-701
Cow position:
Alignm length: 719
Alignm identity: 533
Alignm E-value: 0
Alignm gaps (pig, cow): 92, 119

Conread position: 3-703
Cow position:
Alignm length: 723
Alignm identity: 512
Alignm E-value: 0
Alignm gaps (pig, cow): 117, 78

Conread position: 3-705
Cow position:
Alignm length: 727
Alignm identity: 512
Alignm E-value: 0
Alignm gaps (pig, cow): 92, 120

Conread position: 3-705
Cow position:
Alignm length: 733
Alignm identity: 543
Alignm E-value: 0
Alignm gaps (pig, cow): 92, 242

Conread position: 3-705
Cow position:
Alignm length: 724
Alignm identity: 523
Alignm E-value: 0
Alignm gaps (pig, cow): 92, 120

Conread position: 3-705
Cow position:
Alignm length: 716
Alignm identity: 543
Alignm E-value: 0
Alignm gaps (pig, cow): 92, 238

Conread position: 3-705
Cow position:
Alignm length: 730
Alignm identity: 523
Alignm E-value: 0
Alignm gaps (pig, cow): 92, 123

Conread position: 3-705
Cow position:
Alignm length: 720
Alignm identity: 511
Alignm E-value: 0
Alignm gaps (pig, cow): 92, 120

Conread position: 3-705
Cow position:
Alignm length: 725
Alignm identity: 518
Alignm E-value: 0
Alignm gaps (pig, cow): 92, 120

Conread position: 4-705
Cow position:
Alignm length: 736
Alignm identity: 528
Alignm E-value: 0
Alignm gaps (pig, cow): 94, 66

Conread position: 5-698
Cow position:
Alignm length: 725
Alignm identity: 514
Alignm E-value: 0
Alignm gaps (pig, cow): 90, 36

Conread position: 5-701
Cow position:
Alignm length: 720
Alignm identity: 521
Alignm E-value: 0
Alignm gaps (pig, cow): 90, 121

Conread position: 5-705
Cow position:
Alignm length: 729
Alignm identity: 530
Alignm E-value: 0
Alignm gaps (pig, cow): 65, 70

Conread position: 8-157
Cow position:
Alignm length: 154
Alignm identity: 117
Alignm E-value: 2e-24
Alignm gaps (pig, cow): 11, 55

Conread position: 8-705
Cow position:
Alignm length: 727
Alignm identity: 506
Alignm E-value: 0
Alignm gaps (pig, cow): 87, 115

Conread position: 10-581
Cow position:
Alignm length: 577
Alignm identity: 434
Alignm E-value: 0
Alignm gaps (pig, cow): 86, 116

Conread position: 14-634
Cow position:
Alignm length: 639
Alignm identity: 464
Alignm E-value: 0
Alignm gaps (pig, cow): 81, 236

Conread position: 17-698
Cow position:
Alignm length: 702
Alignm identity: 516
Alignm E-value: 0
Alignm gaps (pig, cow): 81, 8

Conread position: 22-705
Cow position:
Alignm length: 714
Alignm identity: 511
Alignm E-value: 0
Alignm gaps (pig, cow): 76, 103

Conread position: 22-705
Cow position:
Alignm length: 696
Alignm identity: 514
Alignm E-value: 0
Alignm gaps (pig, cow): 73, 218

Conread position: 23-705
Cow position:
Alignm length: 712
Alignm identity: 518
Alignm E-value: 0
Alignm gaps (pig, cow): 65, 102

Conread position: 26-622
Cow position:
Alignm length: 618
Alignm identity: 429
Alignm E-value: 0
Alignm gaps (pig, cow): 69, 217

Conread position: 29-701
Cow position:
Alignm length: 701
Alignm identity: 502
Alignm E-value: 0
Alignm gaps (pig, cow): 69, 94

Conread position: 46-705
Cow position:
Alignm length: 687
Alignm identity: 504
Alignm E-value: 0
Alignm gaps (pig, cow): 52, 79

Conread position: 51-705
Cow position:
Alignm length: 677
Alignm identity: 516
Alignm E-value: 0
Alignm gaps (pig, cow): 47, 71

Conread position: 53-701
Cow position:
Alignm length: 692
Alignm identity: 504
Alignm E-value: 0
Alignm gaps (pig, cow): 46, 72

Conread position: 140-622
Cow position:
Alignm length: 490
Alignm identity: 325
Alignm E-value: 6.02558e-44
Alignm gaps (pig, cow): 192, 86

Conread position: 167-697
Cow position:
Alignm length: 546
Alignm identity: 393
Alignm E-value: 0
Alignm gaps (pig, cow): 50, 65

Conread position: 189-705
Cow position:
Alignm length: 530
Alignm identity: 397
Alignm E-value: 0
Alignm gaps (pig, cow): 37, 45

Conread position: 316-703
Cow position:
Alignm length: 389
Alignm identity: 281
Alignm E-value: 0
Alignm gaps (pig, cow): 16, 60

Conread position: 370-697
Cow position:
Alignm length: 330
Alignm identity: 249
Alignm E-value: 0
Alignm gaps (pig, cow): 254, 13

Conread position: 402-697
Cow position:
Alignm length: 308
Alignm identity: 230
Alignm E-value: 0
Alignm gaps (pig, cow): 44, 14

Show alignments to all cow chromosomes.