Cow genome map
| Conread name: | Utr1-UTR01H020100 |
| Conread position: | 1-209 |
| Cow position: | chr7:61559894-61560112 (view UCSC Genome Browser custom track) |
| Alignm length: | 219 |
| Alignm identity: | 166 |
| Alignm E-value: | 3e-38 |
| Alignm gaps (pig, cow): | 94, 0 |
| Conread position: | 1-262 |
| Cow position: | chr7:61808913-61809188 (view UCSC Genome Browser custom track) |
| Alignm length: | 277 |
| Alignm identity: | 201 |
| Alignm E-value: | 3e-39 |
| Alignm gaps (pig, cow): | 94, 243 |
| Conread position: | 1-315 |
| Cow position: | chr7:59683867-59684190 (view UCSC Genome Browser custom track) |
| Alignm length: | 330 |
| Alignm identity: | 249 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 94, 78 |
| Conread position: | 1-376 |
| Cow position: | chr7:60794620-60794228 (view UCSC Genome Browser custom track) |
| Alignm length: | 393 |
| Alignm identity: | 286 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 94, 0 |
| Conread position: | 1-385 |
| Cow position: | chr7:7257855-7258253 (view UCSC Genome Browser custom track) |
| Alignm length: | 401 |
| Alignm identity: | 281 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 94, 243 |
| Conread position: | 1-391 |
| Cow position: | chr7:49604432-49604839 (view UCSC Genome Browser custom track) |
| Alignm length: | 409 |
| Alignm identity: | 302 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 94, 243 |
| Conread position: | 1-399 |
| Cow position: | chr7:6579869-6580283 (view UCSC Genome Browser custom track) |
| Alignm length: | 416 |
| Alignm identity: | 306 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 94, 245 |
| Conread position: | 1-406 |
| Cow position: | chr7:41532346-41531937 (view UCSC Genome Browser custom track) |
| Alignm length: | 424 |
| Alignm identity: | 282 |
| Alignm E-value: | 7e-36 |
| Alignm gaps (pig, cow): | 114, 83 |
| Conread position: | 1-688 |
| Cow position: | chr7:67675797-67676462 (view UCSC Genome Browser custom track) |
| Alignm length: | 697 |
| Alignm identity: | 488 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 97, 44 |
| Conread position: | 1-697 |
| Cow position: | chr7:16192-15481 (view UCSC Genome Browser custom track) |
| Alignm length: | 726 |
| Alignm identity: | 517 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 94, 155 |
| Conread position: | 1-697 |
| Cow position: | chr7:3300475-3299789 (view UCSC Genome Browser custom track) |
| Alignm length: | 717 |
| Alignm identity: | 509 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 97, 243 |
| Conread position: | 1-697 |
| Cow position: | chr7:11447238-11447948 (view UCSC Genome Browser custom track) |
| Alignm length: | 719 |
| Alignm identity: | 517 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 89, 232 |
| Conread position: | 1-697 |
| Cow position: | chr7:20515095-20514407 (view UCSC Genome Browser custom track) |
| Alignm length: | 714 |
| Alignm identity: | 503 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 94, 244 |
| Conread position: | 1-697 |
| Cow position: | chr7:27101613-27100907 (view UCSC Genome Browser custom track) |
| Alignm length: | 725 |
| Alignm identity: | 532 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 97, 245 |
| Conread position: | 1-697 |
| Cow position: | chr7:65811514-65812203 (view UCSC Genome Browser custom track) |
| Alignm length: | 716 |
| Alignm identity: | 499 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 89, 242 |
| Conread position: | 1-701 |
| Cow position: | chr7:1371964-1371252 (view UCSC Genome Browser custom track) |
| Alignm length: | 727 |
| Alignm identity: | 523 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 94, 189 |
| Conread position: | 1-703 |
| Cow position: | chr7:67799516-67800215 (view UCSC Genome Browser custom track) |
| Alignm length: | 718 |
| Alignm identity: | 523 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 96, 122 |
| Conread position: | 1-705 |
| Cow position: | chr7:545530-546236 (view UCSC Genome Browser custom track) |
| Alignm length: | 733 |
| Alignm identity: | 526 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 97, 31 |
| Conread position: | 1-705 |
| Cow position: | chr7:20798759-20798055 (view UCSC Genome Browser custom track) |
| Alignm length: | 724 |
| Alignm identity: | 509 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 97, 31 |
| Conread position: | 1-705 |
| Cow position: | chr7:25440191-25440891 (view UCSC Genome Browser custom track) |
| Alignm length: | 722 |
| Alignm identity: | 516 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 94, 211 |
| Conread position: | 1-705 |
| Cow position: | chr7:29471138-29471853 (view UCSC Genome Browser custom track) |
| Alignm length: | 736 |
| Alignm identity: | 538 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 22, 124 |
| Conread position: | 1-705 |
| Cow position: | chr7:48635119-48635810 (view UCSC Genome Browser custom track) |
| Alignm length: | 729 |
| Alignm identity: | 527 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 119, 85 |
| Conread position: | 1-705 |
| Cow position: | chr7:59679533-59680240 (view UCSC Genome Browser custom track) |
| Alignm length: | 721 |
| Alignm identity: | 519 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 116, 60 |
| Conread position: | 1-706 |
| Cow position: | chr7:6647976-6647280 (view UCSC Genome Browser custom track) |
| Alignm length: | 722 |
| Alignm identity: | 525 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 97, 251 |
| Conread position: | 3-141 |
| Cow position: | chr7:21320839-21320978 (view UCSC Genome Browser custom track) |
| Alignm length: | 141 |
| Alignm identity: | 112 |
| Alignm E-value: | 9e-28 |
| Alignm gaps (pig, cow): | 92, 120 |
| Conread position: | 3-406 |
| Cow position: | chr7:33405557-33405141 (view UCSC Genome Browser custom track) |
| Alignm length: | 422 |
| Alignm identity: | 317 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 92, 120 |
| Conread position: | 3-461 |
| Cow position: | chr7:61578138-61578601 (view UCSC Genome Browser custom track) |
| Alignm length: | 476 |
| Alignm identity: | 353 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 95, 122 |
| Conread position: | 3-491 |
| Cow position: | chr7:995199-995697 (view UCSC Genome Browser custom track) |
| Alignm length: | 507 |
| Alignm identity: | 358 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 92, 120 |
| Conread position: | 3-532 |
| Cow position: | chr7:8144555-8144014 (view UCSC Genome Browser custom track) |
| Alignm length: | 555 |
| Alignm identity: | 397 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 92, 247 |
| Conread position: | 3-532 |
| Cow position: | chr7:27787318-27787850 (view UCSC Genome Browser custom track) |
| Alignm length: | 547 |
| Alignm identity: | 379 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 92, 120 |
| Conread position: | 3-568 |
| Cow position: | chr7:21929832-21930390 (view UCSC Genome Browser custom track) |
| Alignm length: | 583 |
| Alignm identity: | 418 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 20, 121 |
| Conread position: | 3-691 |
| Cow position: | chr7:55537236-55536550 (view UCSC Genome Browser custom track) |
| Alignm length: | 706 |
| Alignm identity: | 512 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 92, 120 |
| Conread position: | 3-701 |
| Cow position: | chr7:10430735-10430038 (view UCSC Genome Browser custom track) |
| Alignm length: | 714 |
| Alignm identity: | 531 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 92, 120 |
| Conread position: | 3-704 |
| Cow position: | chr7:46901389-46900681 (view UCSC Genome Browser custom track) |
| Alignm length: | 722 |
| Alignm identity: | 525 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 92, 122 |
| Conread position: | 3-705 |
| Cow position: | chr7:525659-526356 (view UCSC Genome Browser custom track) |
| Alignm length: | 722 |
| Alignm identity: | 523 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 92, 119 |
| Conread position: | 3-705 |
| Cow position: | chr7:14138911-14138207 (view UCSC Genome Browser custom track) |
| Alignm length: | 720 |
| Alignm identity: | 535 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 140, 118 |
| Conread position: | 3-705 |
| Cow position: | chr7:24807772-24807092 (view UCSC Genome Browser custom track) |
| Alignm length: | 718 |
| Alignm identity: | 507 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 92, 234 |
| Conread position: | 3-705 |
| Cow position: | chr7:45948466-45947751 (view UCSC Genome Browser custom track) |
| Alignm length: | 729 |
| Alignm identity: | 521 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 92, 245 |
| Conread position: | 3-705 |
| Cow position: | chr7:51014950-51015647 (view UCSC Genome Browser custom track) |
| Alignm length: | 724 |
| Alignm identity: | 543 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 46, 62 |
| Conread position: | 4-705 |
| Cow position: | chr7:21234329-21233617 (view UCSC Genome Browser custom track) |
| Alignm length: | 723 |
| Alignm identity: | 529 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 94, 119 |
| Conread position: | 5-705 |
| Cow position: | chr7:38397500-38398206 (view UCSC Genome Browser custom track) |
| Alignm length: | 721 |
| Alignm identity: | 529 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 92, 117 |
| Conread position: | 7-214 |
| Cow position: | chr7:39097793-39097581 (view UCSC Genome Browser custom track) |
| Alignm length: | 217 |
| Alignm identity: | 159 |
| Alignm E-value: | 3e-29 |
| Alignm gaps (pig, cow): | 91, 72 |
| Conread position: | 8-705 |
| Cow position: | chr7:21311129-21311838 (view UCSC Genome Browser custom track) |
| Alignm length: | 734 |
| Alignm identity: | 537 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 90, 117 |
| Conread position: | 8-705 |
| Cow position: | chr7:34486603-34487300 (view UCSC Genome Browser custom track) |
| Alignm length: | 717 |
| Alignm identity: | 523 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 87, 116 |
| Conread position: | 10-607 |
| Cow position: | chr7:39792463-39793061 (view UCSC Genome Browser custom track) |
| Alignm length: | 615 |
| Alignm identity: | 447 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 133, 87 |
| Conread position: | 17-706 |
| Cow position: | chr7:63386429-63387136 (view UCSC Genome Browser custom track) |
| Alignm length: | 717 |
| Alignm identity: | 510 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 101, 77 |
| Conread position: | 18-705 |
| Cow position: | chr7:67429273-67429960 (view UCSC Genome Browser custom track) |
| Alignm length: | 718 |
| Alignm identity: | 517 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 81, 40 |
| Conread position: | 26-705 |
| Cow position: | chr7:29369317-29368640 (view UCSC Genome Browser custom track) |
| Alignm length: | 713 |
| Alignm identity: | 516 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 51, 44 |
| Conread position: | 28-697 |
| Cow position: | chr7:5309399-5308732 (view UCSC Genome Browser custom track) |
| Alignm length: | 684 |
| Alignm identity: | 499 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 70, 92 |
| Conread position: | 40-708 |
| Cow position: | chr7:33332307-33332957 (view UCSC Genome Browser custom track) |
| Alignm length: | 686 |
| Alignm identity: | 495 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 58, 83 |
| Conread position: | 46-705 |
| Cow position: | chr7:5663292-5663955 (view UCSC Genome Browser custom track) |
| Alignm length: | 684 |
| Alignm identity: | 481 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 24, 37 |
| Conread position: | 137-705 |
| Cow position: | chr7:3156295-3156859 (view UCSC Genome Browser custom track) |
| Alignm length: | 589 |
| Alignm identity: | 426 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 69, 101 |
| Conread position: | 137-705 |
| Cow position: | chr7:42870974-42871533 (view UCSC Genome Browser custom track) |
| Alignm length: | 585 |
| Alignm identity: | 444 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 89, 38 |
| Conread position: | 138-705 |
| Cow position: | chr7:13533068-13532515 (view UCSC Genome Browser custom track) |
| Alignm length: | 579 |
| Alignm identity: | 424 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 88, 96 |
| Conread position: | 143-697 |
| Cow position: | chr7:6720981-6721520 (view UCSC Genome Browser custom track) |
| Alignm length: | 570 |
| Alignm identity: | 397 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 74, 89 |
| Conread position: | 151-598 |
| Cow position: | chr7:20785129-20784693 (view UCSC Genome Browser custom track) |
| Alignm length: | 462 |
| Alignm identity: | 327 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 182, 17 |
| Conread position: | 154-705 |
| Cow position: | chr7:19989876-19990403 (view UCSC Genome Browser custom track) |
| Alignm length: | 557 |
| Alignm identity: | 414 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 72, 17 |
| Conread position: | 212-705 |
| Cow position: | chr7:58376968-58376503 (view UCSC Genome Browser custom track) |
| Alignm length: | 501 |
| Alignm identity: | 341 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 14, 30 |
| Conread position: | 222-705 |
| Cow position: | chr7:27606411-27605924 (view UCSC Genome Browser custom track) |
| Alignm length: | 500 |
| Alignm identity: | 359 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 180, 11 |
| Conread position: | 266-705 |
| Cow position: | chr7:5261965-5261528 (view UCSC Genome Browser custom track) |
| Alignm length: | 457 |
| Alignm identity: | 319 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 196, 60 |
| Conread position: | 303-494 |
| Cow position: | chr7:40319902-40320080 (view UCSC Genome Browser custom track) |
| Alignm length: | 193 |
| Alignm identity: | 139 |
| Alignm E-value: | 1e-21 |
| Alignm gaps (pig, cow): | 29, 43 |
| Conread position: | 371-705 |
| Cow position: | chr7:58994636-58994974 (view UCSC Genome Browser custom track) |
| Alignm length: | 350 |
| Alignm identity: | 257 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 94, 10 |
| Conread position: | 376-678 |
| Cow position: | chr7:30118487-30118174 (view UCSC Genome Browser custom track) |
| Alignm length: | 317 |
| Alignm identity: | 223 |
| Alignm E-value: | 4.00001e-41 |
| Alignm gaps (pig, cow): | 27, 130 |
| Conread position: | 382-706 |
| Cow position: | chr7:27583668-27583339 (view UCSC Genome Browser custom track) |
| Alignm length: | 339 |
| Alignm identity: | 233 |
| Alignm E-value: | 6e-34 |
| Alignm gaps (pig, cow): | 11, 163 |
| Conread position: | 388-705 |
| Cow position: | chr7:57211229-57211540 (view UCSC Genome Browser custom track) |
| Alignm length: | 320 |
| Alignm identity: | 235 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 126, 77 |
| Conread position: | 395-705 |
| Cow position: | chr7:24934447-24934166 (view UCSC Genome Browser custom track) |
| Alignm length: | 312 |
| Alignm identity: | 222 |
| Alignm E-value: | 1e-31 |
| Alignm gaps (pig, cow): | 227, 64 |
| Conread position: | 398-691 |
| Cow position: | chr7:20304576-20304279 (view UCSC Genome Browser custom track) |
| Alignm length: | 308 |
| Alignm identity: | 213 |
| Alignm E-value: | 4e-30 |
| Alignm gaps (pig, cow): | 55, 26 |
| Conread position: | 402-705 |
| Cow position: | chr7:40268888-40268581 (view UCSC Genome Browser custom track) |
| Alignm length: | 310 |
| Alignm identity: | 214 |
| Alignm E-value: | 1e-39 |
| Alignm gaps (pig, cow): | 83, 54 |
| Conread position: | 403-706 |
| Cow position: | chr7:20533030-20533338 (view UCSC Genome Browser custom track) |
| Alignm length: | 315 |
| Alignm identity: | 218 |
| Alignm E-value: | 3e-37 |
| Alignm gaps (pig, cow): | 61, 136 |
| Conread position: | 424-706 |
| Cow position: | chr7:26852553-26852839 (view UCSC Genome Browser custom track) |
| Alignm length: | 296 |
| Alignm identity: | 215 |
| Alignm E-value: | 1e-38 |
| Alignm gaps (pig, cow): | 34, 122 |
Show alignments to all cow chromosomes.