Cow genome map

Conread name: Utr1-UTR01H020100

Conread position: 1-209
Cow position:
Alignm length: 219
Alignm identity: 166
Alignm E-value: 3e-38
Alignm gaps (pig, cow): 94, 0

Conread position: 1-262
Cow position:
Alignm length: 277
Alignm identity: 201
Alignm E-value: 3e-39
Alignm gaps (pig, cow): 94, 243

Conread position: 1-315
Cow position:
Alignm length: 330
Alignm identity: 249
Alignm E-value: 0
Alignm gaps (pig, cow): 94, 78

Conread position: 1-376
Cow position:
Alignm length: 393
Alignm identity: 286
Alignm E-value: 0
Alignm gaps (pig, cow): 94, 0

Conread position: 1-385
Cow position:
Alignm length: 401
Alignm identity: 281
Alignm E-value: 0
Alignm gaps (pig, cow): 94, 243

Conread position: 1-391
Cow position:
Alignm length: 409
Alignm identity: 302
Alignm E-value: 0
Alignm gaps (pig, cow): 94, 243

Conread position: 1-399
Cow position:
Alignm length: 416
Alignm identity: 306
Alignm E-value: 0
Alignm gaps (pig, cow): 94, 245

Conread position: 1-406
Cow position:
Alignm length: 424
Alignm identity: 282
Alignm E-value: 7e-36
Alignm gaps (pig, cow): 114, 83

Conread position: 1-688
Cow position:
Alignm length: 697
Alignm identity: 488
Alignm E-value: 0
Alignm gaps (pig, cow): 97, 44

Conread position: 1-697
Cow position:
Alignm length: 726
Alignm identity: 517
Alignm E-value: 0
Alignm gaps (pig, cow): 94, 155

Conread position: 1-697
Cow position:
Alignm length: 717
Alignm identity: 509
Alignm E-value: 0
Alignm gaps (pig, cow): 97, 243

Conread position: 1-697
Cow position:
Alignm length: 719
Alignm identity: 517
Alignm E-value: 0
Alignm gaps (pig, cow): 89, 232

Conread position: 1-697
Cow position:
Alignm length: 714
Alignm identity: 503
Alignm E-value: 0
Alignm gaps (pig, cow): 94, 244

Conread position: 1-697
Cow position:
Alignm length: 725
Alignm identity: 532
Alignm E-value: 0
Alignm gaps (pig, cow): 97, 245

Conread position: 1-697
Cow position:
Alignm length: 716
Alignm identity: 499
Alignm E-value: 0
Alignm gaps (pig, cow): 89, 242

Conread position: 1-701
Cow position:
Alignm length: 727
Alignm identity: 523
Alignm E-value: 0
Alignm gaps (pig, cow): 94, 189

Conread position: 1-703
Cow position:
Alignm length: 718
Alignm identity: 523
Alignm E-value: 0
Alignm gaps (pig, cow): 96, 122

Conread position: 1-705
Cow position:
Alignm length: 733
Alignm identity: 526
Alignm E-value: 0
Alignm gaps (pig, cow): 97, 31

Conread position: 1-705
Cow position:
Alignm length: 724
Alignm identity: 509
Alignm E-value: 0
Alignm gaps (pig, cow): 97, 31

Conread position: 1-705
Cow position:
Alignm length: 722
Alignm identity: 516
Alignm E-value: 0
Alignm gaps (pig, cow): 94, 211

Conread position: 1-705
Cow position:
Alignm length: 736
Alignm identity: 538
Alignm E-value: 0
Alignm gaps (pig, cow): 22, 124

Conread position: 1-705
Cow position:
Alignm length: 729
Alignm identity: 527
Alignm E-value: 0
Alignm gaps (pig, cow): 119, 85

Conread position: 1-705
Cow position:
Alignm length: 721
Alignm identity: 519
Alignm E-value: 0
Alignm gaps (pig, cow): 116, 60

Conread position: 1-706
Cow position:
Alignm length: 722
Alignm identity: 525
Alignm E-value: 0
Alignm gaps (pig, cow): 97, 251

Conread position: 3-141
Cow position:
Alignm length: 141
Alignm identity: 112
Alignm E-value: 9e-28
Alignm gaps (pig, cow): 92, 120

Conread position: 3-406
Cow position:
Alignm length: 422
Alignm identity: 317
Alignm E-value: 0
Alignm gaps (pig, cow): 92, 120

Conread position: 3-461
Cow position:
Alignm length: 476
Alignm identity: 353
Alignm E-value: 0
Alignm gaps (pig, cow): 95, 122

Conread position: 3-491
Cow position:
Alignm length: 507
Alignm identity: 358
Alignm E-value: 0
Alignm gaps (pig, cow): 92, 120

Conread position: 3-532
Cow position:
Alignm length: 555
Alignm identity: 397
Alignm E-value: 0
Alignm gaps (pig, cow): 92, 247

Conread position: 3-532
Cow position:
Alignm length: 547
Alignm identity: 379
Alignm E-value: 0
Alignm gaps (pig, cow): 92, 120

Conread position: 3-568
Cow position:
Alignm length: 583
Alignm identity: 418
Alignm E-value: 0
Alignm gaps (pig, cow): 20, 121

Conread position: 3-691
Cow position:
Alignm length: 706
Alignm identity: 512
Alignm E-value: 0
Alignm gaps (pig, cow): 92, 120

Conread position: 3-701
Cow position:
Alignm length: 714
Alignm identity: 531
Alignm E-value: 0
Alignm gaps (pig, cow): 92, 120

Conread position: 3-704
Cow position:
Alignm length: 722
Alignm identity: 525
Alignm E-value: 0
Alignm gaps (pig, cow): 92, 122

Conread position: 3-705
Cow position:
Alignm length: 722
Alignm identity: 523
Alignm E-value: 0
Alignm gaps (pig, cow): 92, 119

Conread position: 3-705
Cow position:
Alignm length: 720
Alignm identity: 535
Alignm E-value: 0
Alignm gaps (pig, cow): 140, 118

Conread position: 3-705
Cow position:
Alignm length: 718
Alignm identity: 507
Alignm E-value: 0
Alignm gaps (pig, cow): 92, 234

Conread position: 3-705
Cow position:
Alignm length: 729
Alignm identity: 521
Alignm E-value: 0
Alignm gaps (pig, cow): 92, 245

Conread position: 3-705
Cow position:
Alignm length: 724
Alignm identity: 543
Alignm E-value: 0
Alignm gaps (pig, cow): 46, 62

Conread position: 4-705
Cow position:
Alignm length: 723
Alignm identity: 529
Alignm E-value: 0
Alignm gaps (pig, cow): 94, 119

Conread position: 5-705
Cow position:
Alignm length: 721
Alignm identity: 529
Alignm E-value: 0
Alignm gaps (pig, cow): 92, 117

Conread position: 7-214
Cow position:
Alignm length: 217
Alignm identity: 159
Alignm E-value: 3e-29
Alignm gaps (pig, cow): 91, 72

Conread position: 8-705
Cow position:
Alignm length: 734
Alignm identity: 537
Alignm E-value: 0
Alignm gaps (pig, cow): 90, 117

Conread position: 8-705
Cow position:
Alignm length: 717
Alignm identity: 523
Alignm E-value: 0
Alignm gaps (pig, cow): 87, 116

Conread position: 10-607
Cow position:
Alignm length: 615
Alignm identity: 447
Alignm E-value: 0
Alignm gaps (pig, cow): 133, 87

Conread position: 17-706
Cow position:
Alignm length: 717
Alignm identity: 510
Alignm E-value: 0
Alignm gaps (pig, cow): 101, 77

Conread position: 18-705
Cow position:
Alignm length: 718
Alignm identity: 517
Alignm E-value: 0
Alignm gaps (pig, cow): 81, 40

Conread position: 26-705
Cow position:
Alignm length: 713
Alignm identity: 516
Alignm E-value: 0
Alignm gaps (pig, cow): 51, 44

Conread position: 28-697
Cow position:
Alignm length: 684
Alignm identity: 499
Alignm E-value: 0
Alignm gaps (pig, cow): 70, 92

Conread position: 40-708
Cow position:
Alignm length: 686
Alignm identity: 495
Alignm E-value: 0
Alignm gaps (pig, cow): 58, 83

Conread position: 46-705
Cow position:
Alignm length: 684
Alignm identity: 481
Alignm E-value: 0
Alignm gaps (pig, cow): 24, 37

Conread position: 137-705
Cow position:
Alignm length: 589
Alignm identity: 426
Alignm E-value: 0
Alignm gaps (pig, cow): 69, 101

Conread position: 137-705
Cow position:
Alignm length: 585
Alignm identity: 444
Alignm E-value: 0
Alignm gaps (pig, cow): 89, 38

Conread position: 138-705
Cow position:
Alignm length: 579
Alignm identity: 424
Alignm E-value: 0
Alignm gaps (pig, cow): 88, 96

Conread position: 143-697
Cow position:
Alignm length: 570
Alignm identity: 397
Alignm E-value: 0
Alignm gaps (pig, cow): 74, 89

Conread position: 151-598
Cow position:
Alignm length: 462
Alignm identity: 327
Alignm E-value: 0
Alignm gaps (pig, cow): 182, 17

Conread position: 154-705
Cow position:
Alignm length: 557
Alignm identity: 414
Alignm E-value: 0
Alignm gaps (pig, cow): 72, 17

Conread position: 212-705
Cow position:
Alignm length: 501
Alignm identity: 341
Alignm E-value: 0
Alignm gaps (pig, cow): 14, 30

Conread position: 222-705
Cow position:
Alignm length: 500
Alignm identity: 359
Alignm E-value: 0
Alignm gaps (pig, cow): 180, 11

Conread position: 266-705
Cow position:
Alignm length: 457
Alignm identity: 319
Alignm E-value: 0
Alignm gaps (pig, cow): 196, 60

Conread position: 303-494
Cow position:
Alignm length: 193
Alignm identity: 139
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 29, 43

Conread position: 371-705
Cow position:
Alignm length: 350
Alignm identity: 257
Alignm E-value: 0
Alignm gaps (pig, cow): 94, 10

Conread position: 376-678
Cow position:
Alignm length: 317
Alignm identity: 223
Alignm E-value: 4.00001e-41
Alignm gaps (pig, cow): 27, 130

Conread position: 382-706
Cow position:
Alignm length: 339
Alignm identity: 233
Alignm E-value: 6e-34
Alignm gaps (pig, cow): 11, 163

Conread position: 388-705
Cow position:
Alignm length: 320
Alignm identity: 235
Alignm E-value: 0
Alignm gaps (pig, cow): 126, 77

Conread position: 395-705
Cow position:
Alignm length: 312
Alignm identity: 222
Alignm E-value: 1e-31
Alignm gaps (pig, cow): 227, 64

Conread position: 398-691
Cow position:
Alignm length: 308
Alignm identity: 213
Alignm E-value: 4e-30
Alignm gaps (pig, cow): 55, 26

Conread position: 402-705
Cow position:
Alignm length: 310
Alignm identity: 214
Alignm E-value: 1e-39
Alignm gaps (pig, cow): 83, 54

Conread position: 403-706
Cow position:
Alignm length: 315
Alignm identity: 218
Alignm E-value: 3e-37
Alignm gaps (pig, cow): 61, 136

Conread position: 424-706
Cow position:
Alignm length: 296
Alignm identity: 215
Alignm E-value: 1e-38
Alignm gaps (pig, cow): 34, 122

Show alignments to all cow chromosomes.