Cow genome map

Conread name: Utr1-UTR01H020100

Conread position: 1-116
Cow position:
Alignm length: 118
Alignm identity: 98
Alignm E-value: 7e-26
Alignm gaps (pig, cow): 97, 0

Conread position: 1-139
Cow position:
Alignm length: 142
Alignm identity: 109
Alignm E-value: 4e-22
Alignm gaps (pig, cow): 93, 108

Conread position: 1-141
Cow position:
Alignm length: 143
Alignm identity: 109
Alignm E-value: 6e-24
Alignm gaps (pig, cow): 94, 121

Conread position: 1-157
Cow position:
Alignm length: 159
Alignm identity: 120
Alignm E-value: 8e-27
Alignm gaps (pig, cow): 94, 122

Conread position: 1-157
Cow position:
Alignm length: 159
Alignm identity: 119
Alignm E-value: 7e-26
Alignm gaps (pig, cow): 94, 122

Conread position: 1-163
Cow position:
Alignm length: 167
Alignm identity: 128
Alignm E-value: 9e-29
Alignm gaps (pig, cow): 93, 122

Conread position: 1-212
Cow position:
Alignm length: 226
Alignm identity: 168
Alignm E-value: 5e-34
Alignm gaps (pig, cow): 94, 0

Conread position: 1-215
Cow position:
Alignm length: 229
Alignm identity: 174
Alignm E-value: 3e-38
Alignm gaps (pig, cow): 94, 0

Conread position: 1-224
Cow position:
Alignm length: 238
Alignm identity: 171
Alignm E-value: 1e-29
Alignm gaps (pig, cow): 94, 0

Conread position: 1-507
Cow position:
Alignm length: 526
Alignm identity: 370
Alignm E-value: 0
Alignm gaps (pig, cow): 38, 244

Conread position: 1-533
Cow position:
Alignm length: 549
Alignm identity: 388
Alignm E-value: 0
Alignm gaps (pig, cow): 94, 155

Conread position: 1-637
Cow position:
Alignm length: 681
Alignm identity: 480
Alignm E-value: 0
Alignm gaps (pig, cow): 97, 246

Conread position: 1-657
Cow position:
Alignm length: 683
Alignm identity: 498
Alignm E-value: 0
Alignm gaps (pig, cow): 94, 237

Conread position: 1-658
Cow position:
Alignm length: 685
Alignm identity: 489
Alignm E-value: 0
Alignm gaps (pig, cow): 97, 124

Conread position: 1-665
Cow position:
Alignm length: 688
Alignm identity: 478
Alignm E-value: 0
Alignm gaps (pig, cow): 94, 244

Conread position: 1-690
Cow position:
Alignm length: 707
Alignm identity: 487
Alignm E-value: 0
Alignm gaps (pig, cow): 94, 167

Conread position: 1-690
Cow position:
Alignm length: 708
Alignm identity: 488
Alignm E-value: 0
Alignm gaps (pig, cow): 94, 37

Conread position: 1-697
Cow position:
Alignm length: 722
Alignm identity: 525
Alignm E-value: 0
Alignm gaps (pig, cow): 53, 213

Conread position: 1-697
Cow position:
Alignm length: 725
Alignm identity: 514
Alignm E-value: 0
Alignm gaps (pig, cow): 97, 244

Conread position: 1-697
Cow position:
Alignm length: 714
Alignm identity: 504
Alignm E-value: 0
Alignm gaps (pig, cow): 41, 34

Conread position: 1-697
Cow position:
Alignm length: 716
Alignm identity: 509
Alignm E-value: 0
Alignm gaps (pig, cow): 94, 243

Conread position: 1-697
Cow position:
Alignm length: 712
Alignm identity: 512
Alignm E-value: 0
Alignm gaps (pig, cow): 94, 241

Conread position: 1-697
Cow position:
Alignm length: 725
Alignm identity: 517
Alignm E-value: 0
Alignm gaps (pig, cow): 97, 247

Conread position: 1-697
Cow position:
Alignm length: 716
Alignm identity: 518
Alignm E-value: 0
Alignm gaps (pig, cow): 94, 243

Conread position: 1-697
Cow position:
Alignm length: 714
Alignm identity: 518
Alignm E-value: 0
Alignm gaps (pig, cow): 97, 243

Conread position: 1-697
Cow position:
Alignm length: 716
Alignm identity: 507
Alignm E-value: 0
Alignm gaps (pig, cow): 94, 243

Conread position: 1-698
Cow position:
Alignm length: 741
Alignm identity: 521
Alignm E-value: 0
Alignm gaps (pig, cow): 94, 124

Conread position: 1-705
Cow position:
Alignm length: 736
Alignm identity: 546
Alignm E-value: 0
Alignm gaps (pig, cow): 97, 247

Conread position: 1-705
Cow position:
Alignm length: 723
Alignm identity: 520
Alignm E-value: 0
Alignm gaps (pig, cow): 94, 232

Conread position: 1-705
Cow position:
Alignm length: 722
Alignm identity: 541
Alignm E-value: 0
Alignm gaps (pig, cow): 97, 48

Conread position: 1-705
Cow position:
Alignm length: 719
Alignm identity: 530
Alignm E-value: 0
Alignm gaps (pig, cow): 97, 122

Conread position: 1-705
Cow position:
Alignm length: 727
Alignm identity: 527
Alignm E-value: 0
Alignm gaps (pig, cow): 96, 123

Conread position: 2-532
Cow position:
Alignm length: 553
Alignm identity: 387
Alignm E-value: 0
Alignm gaps (pig, cow): 65, 249

Conread position: 3-157
Cow position:
Alignm length: 158
Alignm identity: 119
Alignm E-value: 2e-25
Alignm gaps (pig, cow): 12, 121

Conread position: 3-344
Cow position:
Alignm length: 359
Alignm identity: 258
Alignm E-value: 0
Alignm gaps (pig, cow): 95, 30

Conread position: 3-361
Cow position:
Alignm length: 375
Alignm identity: 271
Alignm E-value: 0
Alignm gaps (pig, cow): 92, 242

Conread position: 3-396
Cow position:
Alignm length: 409
Alignm identity: 302
Alignm E-value: 0
Alignm gaps (pig, cow): 92, 119

Conread position: 3-442
Cow position:
Alignm length: 457
Alignm identity: 337
Alignm E-value: 0
Alignm gaps (pig, cow): 95, 123

Conread position: 3-657
Cow position:
Alignm length: 688
Alignm identity: 501
Alignm E-value: 0
Alignm gaps (pig, cow): 95, 122

Conread position: 3-657
Cow position:
Alignm length: 672
Alignm identity: 475
Alignm E-value: 0
Alignm gaps (pig, cow): 92, 117

Conread position: 3-658
Cow position:
Alignm length: 677
Alignm identity: 505
Alignm E-value: 0
Alignm gaps (pig, cow): 92, 120

Conread position: 3-691
Cow position:
Alignm length: 704
Alignm identity: 516
Alignm E-value: 0
Alignm gaps (pig, cow): 92, 120

Conread position: 3-697
Cow position:
Alignm length: 719
Alignm identity: 521
Alignm E-value: 0
Alignm gaps (pig, cow): 92, 234

Conread position: 3-701
Cow position:
Alignm length: 727
Alignm identity: 521
Alignm E-value: 0
Alignm gaps (pig, cow): 95, 122

Conread position: 3-701
Cow position:
Alignm length: 728
Alignm identity: 521
Alignm E-value: 0
Alignm gaps (pig, cow): 95, 122

Conread position: 3-701
Cow position:
Alignm length: 728
Alignm identity: 517
Alignm E-value: 0
Alignm gaps (pig, cow): 93, 123

Conread position: 3-701
Cow position:
Alignm length: 718
Alignm identity: 519
Alignm E-value: 0
Alignm gaps (pig, cow): 92, 242

Conread position: 3-701
Cow position:
Alignm length: 716
Alignm identity: 527
Alignm E-value: 0
Alignm gaps (pig, cow): 95, 120

Conread position: 3-701
Cow position:
Alignm length: 733
Alignm identity: 538
Alignm E-value: 0
Alignm gaps (pig, cow): 95, 122

Conread position: 3-701
Cow position:
Alignm length: 717
Alignm identity: 525
Alignm E-value: 0
Alignm gaps (pig, cow): 83, 120

Conread position: 3-705
Cow position:
Alignm length: 721
Alignm identity: 530
Alignm E-value: 0
Alignm gaps (pig, cow): 92, 120

Conread position: 3-705
Cow position:
Alignm length: 721
Alignm identity: 531
Alignm E-value: 0
Alignm gaps (pig, cow): 92, 120

Conread position: 3-705
Cow position:
Alignm length: 722
Alignm identity: 525
Alignm E-value: 0
Alignm gaps (pig, cow): 92, 122

Conread position: 3-705
Cow position:
Alignm length: 736
Alignm identity: 528
Alignm E-value: 0
Alignm gaps (pig, cow): 95, 122

Conread position: 3-705
Cow position:
Alignm length: 723
Alignm identity: 540
Alignm E-value: 0
Alignm gaps (pig, cow): 92, 120

Conread position: 3-705
Cow position:
Alignm length: 734
Alignm identity: 538
Alignm E-value: 0
Alignm gaps (pig, cow): 51, 243

Conread position: 4-697
Cow position:
Alignm length: 720
Alignm identity: 526
Alignm E-value: 0
Alignm gaps (pig, cow): 91, 241

Conread position: 4-704
Cow position:
Alignm length: 718
Alignm identity: 478
Alignm E-value: 0
Alignm gaps (pig, cow): 92, 28

Conread position: 10-641
Cow position:
Alignm length: 652
Alignm identity: 470
Alignm E-value: 0
Alignm gaps (pig, cow): 85, 234

Conread position: 14-697
Cow position:
Alignm length: 702
Alignm identity: 505
Alignm E-value: 0
Alignm gaps (pig, cow): 81, 228

Conread position: 18-697
Cow position:
Alignm length: 697
Alignm identity: 504
Alignm E-value: 0
Alignm gaps (pig, cow): 77, 224

Conread position: 27-705
Cow position:
Alignm length: 687
Alignm identity: 503
Alignm E-value: 0
Alignm gaps (pig, cow): 97, 60

Conread position: 137-697
Cow position:
Alignm length: 580
Alignm identity: 404
Alignm E-value: 0
Alignm gaps (pig, cow): 89, 73

Conread position: 148-705
Cow position:
Alignm length: 588
Alignm identity: 431
Alignm E-value: 0
Alignm gaps (pig, cow): 78, 86

Conread position: 185-701
Cow position:
Alignm length: 547
Alignm identity: 404
Alignm E-value: 0
Alignm gaps (pig, cow): 41, 49

Conread position: 198-634
Cow position:
Alignm length: 451
Alignm identity: 324
Alignm E-value: 0
Alignm gaps (pig, cow): 22, 36

Conread position: 206-697
Cow position:
Alignm length: 509
Alignm identity: 375
Alignm E-value: 0
Alignm gaps (pig, cow): 119, 8

Conread position: 220-697
Cow position:
Alignm length: 491
Alignm identity: 349
Alignm E-value: 0
Alignm gaps (pig, cow): 112, 11

Conread position: 222-605
Cow position:
Alignm length: 397
Alignm identity: 271
Alignm E-value: 2e-37
Alignm gaps (pig, cow): 92, 112

Conread position: 222-702
Cow position:
Alignm length: 489
Alignm identity: 349
Alignm E-value: 0
Alignm gaps (pig, cow): 110, 11

Conread position: 325-697
Cow position:
Alignm length: 386
Alignm identity: 286
Alignm E-value: 0
Alignm gaps (pig, cow): 7, 67

Conread position: 376-702
Cow position:
Alignm length: 349
Alignm identity: 245
Alignm E-value: 5e-34
Alignm gaps (pig, cow): 29, 168

Conread position: 379-698
Cow position:
Alignm length: 323
Alignm identity: 230
Alignm E-value: 0
Alignm gaps (pig, cow): 74, 49

Conread position: 399-704
Cow position:
Alignm length: 317
Alignm identity: 213
Alignm E-value: 2e-24
Alignm gaps (pig, cow): 66, 17

Conread position: 400-705
Cow position:
Alignm length: 319
Alignm identity: 239
Alignm E-value: 0
Alignm gaps (pig, cow): 62, 142

Conread position: 402-697
Cow position:
Alignm length: 308
Alignm identity: 232
Alignm E-value: 0
Alignm gaps (pig, cow): 94, 22

Conread position: 402-705
Cow position:
Alignm length: 317
Alignm identity: 236
Alignm E-value: 0
Alignm gaps (pig, cow): 60, 14

Conread position: 409-706
Cow position:
Alignm length: 313
Alignm identity: 209
Alignm E-value: 9e-29
Alignm gaps (pig, cow): 50, 160

Conread position: 410-705
Cow position:
Alignm length: 298
Alignm identity: 203
Alignm E-value: 6e-25
Alignm gaps (pig, cow): 44, 23

Show alignments to all cow chromosomes.