Cow genome map
| Conread name: | Utr1-UTR01H020100 |
| Conread position: | 1-116 |
| Cow position: | chr8:42160557-42160440 (view UCSC Genome Browser custom track) |
| Alignm length: | 118 |
| Alignm identity: | 98 |
| Alignm E-value: | 7e-26 |
| Alignm gaps (pig, cow): | 97, 0 |
| Conread position: | 1-139 |
| Cow position: | chr8:21157976-21157837 (view UCSC Genome Browser custom track) |
| Alignm length: | 142 |
| Alignm identity: | 109 |
| Alignm E-value: | 4e-22 |
| Alignm gaps (pig, cow): | 93, 108 |
| Conread position: | 1-141 |
| Cow position: | chr8:47075136-47075277 (view UCSC Genome Browser custom track) |
| Alignm length: | 143 |
| Alignm identity: | 109 |
| Alignm E-value: | 6e-24 |
| Alignm gaps (pig, cow): | 94, 121 |
| Conread position: | 1-157 |
| Cow position: | chr8:15711548-15711391 (view UCSC Genome Browser custom track) |
| Alignm length: | 159 |
| Alignm identity: | 120 |
| Alignm E-value: | 8e-27 |
| Alignm gaps (pig, cow): | 94, 122 |
| Conread position: | 1-157 |
| Cow position: | chr8:19591001-19591158 (view UCSC Genome Browser custom track) |
| Alignm length: | 159 |
| Alignm identity: | 119 |
| Alignm E-value: | 7e-26 |
| Alignm gaps (pig, cow): | 94, 122 |
| Conread position: | 1-163 |
| Cow position: | chr8:1348364-1348199 (view UCSC Genome Browser custom track) |
| Alignm length: | 167 |
| Alignm identity: | 128 |
| Alignm E-value: | 9e-29 |
| Alignm gaps (pig, cow): | 93, 122 |
| Conread position: | 1-212 |
| Cow position: | chr8:25376629-25376854 (view UCSC Genome Browser custom track) |
| Alignm length: | 226 |
| Alignm identity: | 168 |
| Alignm E-value: | 5e-34 |
| Alignm gaps (pig, cow): | 94, 0 |
| Conread position: | 1-215 |
| Cow position: | chr8:6684315-6684543 (view UCSC Genome Browser custom track) |
| Alignm length: | 229 |
| Alignm identity: | 174 |
| Alignm E-value: | 3e-38 |
| Alignm gaps (pig, cow): | 94, 0 |
| Conread position: | 1-224 |
| Cow position: | chr8:46944039-46943802 (view UCSC Genome Browser custom track) |
| Alignm length: | 238 |
| Alignm identity: | 171 |
| Alignm E-value: | 1e-29 |
| Alignm gaps (pig, cow): | 94, 0 |
| Conread position: | 1-507 |
| Cow position: | chr8:30891448-30890933 (view UCSC Genome Browser custom track) |
| Alignm length: | 526 |
| Alignm identity: | 370 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 38, 244 |
| Conread position: | 1-533 |
| Cow position: | chr8:8556279-8555740 (view UCSC Genome Browser custom track) |
| Alignm length: | 549 |
| Alignm identity: | 388 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 94, 155 |
| Conread position: | 1-637 |
| Cow position: | chr8:20136741-20136065 (view UCSC Genome Browser custom track) |
| Alignm length: | 681 |
| Alignm identity: | 480 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 97, 246 |
| Conread position: | 1-657 |
| Cow position: | chr8:47068938-47068276 (view UCSC Genome Browser custom track) |
| Alignm length: | 683 |
| Alignm identity: | 498 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 94, 237 |
| Conread position: | 1-658 |
| Cow position: | chr8:11969414-11968750 (view UCSC Genome Browser custom track) |
| Alignm length: | 685 |
| Alignm identity: | 489 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 97, 124 |
| Conread position: | 1-665 |
| Cow position: | chr8:11762808-11763467 (view UCSC Genome Browser custom track) |
| Alignm length: | 688 |
| Alignm identity: | 478 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 94, 244 |
| Conread position: | 1-690 |
| Cow position: | chr8:1153441-1152739 (view UCSC Genome Browser custom track) |
| Alignm length: | 707 |
| Alignm identity: | 487 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 94, 167 |
| Conread position: | 1-690 |
| Cow position: | chr8:10749236-10749921 (view UCSC Genome Browser custom track) |
| Alignm length: | 708 |
| Alignm identity: | 488 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 94, 37 |
| Conread position: | 1-697 |
| Cow position: | chr8:1319910-1320609 (view UCSC Genome Browser custom track) |
| Alignm length: | 722 |
| Alignm identity: | 525 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 53, 213 |
| Conread position: | 1-697 |
| Cow position: | chr8:2886617-2887318 (view UCSC Genome Browser custom track) |
| Alignm length: | 725 |
| Alignm identity: | 514 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 97, 244 |
| Conread position: | 1-697 |
| Cow position: | chr8:8517718-8517032 (view UCSC Genome Browser custom track) |
| Alignm length: | 714 |
| Alignm identity: | 504 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 41, 34 |
| Conread position: | 1-697 |
| Cow position: | chr8:22571441-22570739 (view UCSC Genome Browser custom track) |
| Alignm length: | 716 |
| Alignm identity: | 509 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 94, 243 |
| Conread position: | 1-697 |
| Cow position: | chr8:27579265-27579965 (view UCSC Genome Browser custom track) |
| Alignm length: | 712 |
| Alignm identity: | 512 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 94, 241 |
| Conread position: | 1-697 |
| Cow position: | chr8:32437216-32436517 (view UCSC Genome Browser custom track) |
| Alignm length: | 725 |
| Alignm identity: | 517 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 97, 247 |
| Conread position: | 1-697 |
| Cow position: | chr8:32631159-32630467 (view UCSC Genome Browser custom track) |
| Alignm length: | 716 |
| Alignm identity: | 518 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 94, 243 |
| Conread position: | 1-697 |
| Cow position: | chr8:34348542-34349236 (view UCSC Genome Browser custom track) |
| Alignm length: | 714 |
| Alignm identity: | 518 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 97, 243 |
| Conread position: | 1-697 |
| Cow position: | chr8:37931959-37932661 (view UCSC Genome Browser custom track) |
| Alignm length: | 716 |
| Alignm identity: | 507 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 94, 243 |
| Conread position: | 1-698 |
| Cow position: | chr8:56883370-56884101 (view UCSC Genome Browser custom track) |
| Alignm length: | 741 |
| Alignm identity: | 521 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 94, 124 |
| Conread position: | 1-705 |
| Cow position: | chr8:5017048-5017760 (view UCSC Genome Browser custom track) |
| Alignm length: | 736 |
| Alignm identity: | 546 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 97, 247 |
| Conread position: | 1-705 |
| Cow position: | chr8:32041879-32041190 (view UCSC Genome Browser custom track) |
| Alignm length: | 723 |
| Alignm identity: | 520 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 94, 232 |
| Conread position: | 1-705 |
| Cow position: | chr8:38606330-38605640 (view UCSC Genome Browser custom track) |
| Alignm length: | 722 |
| Alignm identity: | 541 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 97, 48 |
| Conread position: | 1-705 |
| Cow position: | chr8:39195339-39194640 (view UCSC Genome Browser custom track) |
| Alignm length: | 719 |
| Alignm identity: | 530 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 97, 122 |
| Conread position: | 1-705 |
| Cow position: | chr8:49859893-49859194 (view UCSC Genome Browser custom track) |
| Alignm length: | 727 |
| Alignm identity: | 527 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 96, 123 |
| Conread position: | 2-532 |
| Cow position: | chr8:8315595-8315051 (view UCSC Genome Browser custom track) |
| Alignm length: | 553 |
| Alignm identity: | 387 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 65, 249 |
| Conread position: | 3-157 |
| Cow position: | chr8:12449823-12449979 (view UCSC Genome Browser custom track) |
| Alignm length: | 158 |
| Alignm identity: | 119 |
| Alignm E-value: | 2e-25 |
| Alignm gaps (pig, cow): | 12, 121 |
| Conread position: | 3-344 |
| Cow position: | chr8:19051348-19051702 (view UCSC Genome Browser custom track) |
| Alignm length: | 359 |
| Alignm identity: | 258 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 95, 30 |
| Conread position: | 3-361 |
| Cow position: | chr8:49215312-49215685 (view UCSC Genome Browser custom track) |
| Alignm length: | 375 |
| Alignm identity: | 271 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 92, 242 |
| Conread position: | 3-396 |
| Cow position: | chr8:8911379-8911779 (view UCSC Genome Browser custom track) |
| Alignm length: | 409 |
| Alignm identity: | 302 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 92, 119 |
| Conread position: | 3-442 |
| Cow position: | chr8:2170502-2170058 (view UCSC Genome Browser custom track) |
| Alignm length: | 457 |
| Alignm identity: | 337 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 95, 123 |
| Conread position: | 3-657 |
| Cow position: | chr8:24915465-24914802 (view UCSC Genome Browser custom track) |
| Alignm length: | 688 |
| Alignm identity: | 501 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 95, 122 |
| Conread position: | 3-657 |
| Cow position: | chr8:50994646-50995299 (view UCSC Genome Browser custom track) |
| Alignm length: | 672 |
| Alignm identity: | 475 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 92, 117 |
| Conread position: | 3-658 |
| Cow position: | chr8:14591031-14590369 (view UCSC Genome Browser custom track) |
| Alignm length: | 677 |
| Alignm identity: | 505 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 92, 120 |
| Conread position: | 3-691 |
| Cow position: | chr8:25523278-25523963 (view UCSC Genome Browser custom track) |
| Alignm length: | 704 |
| Alignm identity: | 516 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 92, 120 |
| Conread position: | 3-697 |
| Cow position: | chr8:25775796-25775092 (view UCSC Genome Browser custom track) |
| Alignm length: | 719 |
| Alignm identity: | 521 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 92, 234 |
| Conread position: | 3-701 |
| Cow position: | chr8:3856144-3855455 (view UCSC Genome Browser custom track) |
| Alignm length: | 727 |
| Alignm identity: | 521 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 95, 122 |
| Conread position: | 3-701 |
| Cow position: | chr8:7161768-7162467 (view UCSC Genome Browser custom track) |
| Alignm length: | 728 |
| Alignm identity: | 521 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 95, 122 |
| Conread position: | 3-701 |
| Cow position: | chr8:8401244-8400543 (view UCSC Genome Browser custom track) |
| Alignm length: | 728 |
| Alignm identity: | 517 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 93, 123 |
| Conread position: | 3-701 |
| Cow position: | chr8:23771508-23772215 (view UCSC Genome Browser custom track) |
| Alignm length: | 718 |
| Alignm identity: | 519 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 92, 242 |
| Conread position: | 3-701 |
| Cow position: | chr8:46051058-46051754 (view UCSC Genome Browser custom track) |
| Alignm length: | 716 |
| Alignm identity: | 527 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 95, 120 |
| Conread position: | 3-701 |
| Cow position: | chr8:50930259-50929545 (view UCSC Genome Browser custom track) |
| Alignm length: | 733 |
| Alignm identity: | 538 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 95, 122 |
| Conread position: | 3-701 |
| Cow position: | chr8:59262047-59261370 (view UCSC Genome Browser custom track) |
| Alignm length: | 717 |
| Alignm identity: | 525 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 83, 120 |
| Conread position: | 3-705 |
| Cow position: | chr8:4687273-4687975 (view UCSC Genome Browser custom track) |
| Alignm length: | 721 |
| Alignm identity: | 530 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 92, 120 |
| Conread position: | 3-705 |
| Cow position: | chr8:14928008-14927305 (view UCSC Genome Browser custom track) |
| Alignm length: | 721 |
| Alignm identity: | 531 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 92, 120 |
| Conread position: | 3-705 |
| Cow position: | chr8:25408601-25409307 (view UCSC Genome Browser custom track) |
| Alignm length: | 722 |
| Alignm identity: | 525 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 92, 122 |
| Conread position: | 3-705 |
| Cow position: | chr8:32318680-32317969 (view UCSC Genome Browser custom track) |
| Alignm length: | 736 |
| Alignm identity: | 528 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 95, 122 |
| Conread position: | 3-705 |
| Cow position: | chr8:47661449-47660748 (view UCSC Genome Browser custom track) |
| Alignm length: | 723 |
| Alignm identity: | 540 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 92, 120 |
| Conread position: | 3-705 |
| Cow position: | chr8:60061253-60061970 (view UCSC Genome Browser custom track) |
| Alignm length: | 734 |
| Alignm identity: | 538 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 51, 243 |
| Conread position: | 4-697 |
| Cow position: | chr8:33589247-33589953 (view UCSC Genome Browser custom track) |
| Alignm length: | 720 |
| Alignm identity: | 526 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 91, 241 |
| Conread position: | 4-704 |
| Cow position: | chr8:42657094-42656414 (view UCSC Genome Browser custom track) |
| Alignm length: | 718 |
| Alignm identity: | 478 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 92, 28 |
| Conread position: | 10-641 |
| Cow position: | chr8:61906037-61906674 (view UCSC Genome Browser custom track) |
| Alignm length: | 652 |
| Alignm identity: | 470 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 85, 234 |
| Conread position: | 14-697 |
| Cow position: | chr8:6064893-6064217 (view UCSC Genome Browser custom track) |
| Alignm length: | 702 |
| Alignm identity: | 505 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 81, 228 |
| Conread position: | 18-697 |
| Cow position: | chr8:9736126-9736810 (view UCSC Genome Browser custom track) |
| Alignm length: | 697 |
| Alignm identity: | 504 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 77, 224 |
| Conread position: | 27-705 |
| Cow position: | chr8:58185650-58185017 (view UCSC Genome Browser custom track) |
| Alignm length: | 687 |
| Alignm identity: | 503 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 97, 60 |
| Conread position: | 137-697 |
| Cow position: | chr8:42468682-42469242 (view UCSC Genome Browser custom track) |
| Alignm length: | 580 |
| Alignm identity: | 404 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 89, 73 |
| Conread position: | 148-705 |
| Cow position: | chr8:10742640-10742074 (view UCSC Genome Browser custom track) |
| Alignm length: | 588 |
| Alignm identity: | 431 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 78, 86 |
| Conread position: | 185-701 |
| Cow position: | chr8:12450085-12450613 (view UCSC Genome Browser custom track) |
| Alignm length: | 547 |
| Alignm identity: | 404 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 41, 49 |
| Conread position: | 198-634 |
| Cow position: | chr8:25437398-25437830 (view UCSC Genome Browser custom track) |
| Alignm length: | 451 |
| Alignm identity: | 324 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 22, 36 |
| Conread position: | 206-697 |
| Cow position: | chr8:1348176-1347685 (view UCSC Genome Browser custom track) |
| Alignm length: | 509 |
| Alignm identity: | 375 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 119, 8 |
| Conread position: | 220-697 |
| Cow position: | chr8:25377085-25377545 (view UCSC Genome Browser custom track) |
| Alignm length: | 491 |
| Alignm identity: | 349 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 112, 11 |
| Conread position: | 222-605 |
| Cow position: | chr8:19189764-19190139 (view UCSC Genome Browser custom track) |
| Alignm length: | 397 |
| Alignm identity: | 271 |
| Alignm E-value: | 2e-37 |
| Alignm gaps (pig, cow): | 92, 112 |
| Conread position: | 222-702 |
| Cow position: | chr8:12801518-12801984 (view UCSC Genome Browser custom track) |
| Alignm length: | 489 |
| Alignm identity: | 349 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 110, 11 |
| Conread position: | 325-697 |
| Cow position: | chr8:47075352-47075727 (view UCSC Genome Browser custom track) |
| Alignm length: | 386 |
| Alignm identity: | 286 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 7, 67 |
| Conread position: | 376-702 |
| Cow position: | chr8:11775856-11776192 (view UCSC Genome Browser custom track) |
| Alignm length: | 349 |
| Alignm identity: | 245 |
| Alignm E-value: | 5e-34 |
| Alignm gaps (pig, cow): | 29, 168 |
| Conread position: | 379-698 |
| Cow position: | chr8:35213113-35213430 (view UCSC Genome Browser custom track) |
| Alignm length: | 323 |
| Alignm identity: | 230 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 74, 49 |
| Conread position: | 399-704 |
| Cow position: | chr8:21230346-21230649 (view UCSC Genome Browser custom track) |
| Alignm length: | 317 |
| Alignm identity: | 213 |
| Alignm E-value: | 2e-24 |
| Alignm gaps (pig, cow): | 66, 17 |
| Conread position: | 400-705 |
| Cow position: | chr8:29007901-29008209 (view UCSC Genome Browser custom track) |
| Alignm length: | 319 |
| Alignm identity: | 239 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 62, 142 |
| Conread position: | 402-697 |
| Cow position: | chr8:33325317-33325618 (view UCSC Genome Browser custom track) |
| Alignm length: | 308 |
| Alignm identity: | 232 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 94, 22 |
| Conread position: | 402-705 |
| Cow position: | chr8:49215999-49216304 (view UCSC Genome Browser custom track) |
| Alignm length: | 317 |
| Alignm identity: | 236 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 60, 14 |
| Conread position: | 409-706 |
| Cow position: | chr8:15409059-15409369 (view UCSC Genome Browser custom track) |
| Alignm length: | 313 |
| Alignm identity: | 209 |
| Alignm E-value: | 9e-29 |
| Alignm gaps (pig, cow): | 50, 160 |
| Conread position: | 410-705 |
| Cow position: | chr8:46454503-46454228 (view UCSC Genome Browser custom track) |
| Alignm length: | 298 |
| Alignm identity: | 203 |
| Alignm E-value: | 6e-25 |
| Alignm gaps (pig, cow): | 44, 23 |
Show alignments to all cow chromosomes.