Cow genome map
| Conread name: | Utr1-UTR01H020100 |
| Conread position: | 1-274 |
| Cow position: | chr9:30827197-30827484 (view UCSC Genome Browser custom track) |
| Alignm length: | 290 |
| Alignm identity: | 216 |
| Alignm E-value: | 1.4013e-45 |
| Alignm gaps (pig, cow): | 94, 193 |
| Conread position: | 1-283 |
| Cow position: | chr9:3998532-3998827 (view UCSC Genome Browser custom track) |
| Alignm length: | 297 |
| Alignm identity: | 213 |
| Alignm E-value: | 4.00001e-41 |
| Alignm gaps (pig, cow): | 94, 272 |
| Conread position: | 1-317 |
| Cow position: | chr9:36725022-36725350 (view UCSC Genome Browser custom track) |
| Alignm length: | 332 |
| Alignm identity: | 253 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 86, 94 |
| Conread position: | 1-460 |
| Cow position: | chr9:64119738-64120215 (view UCSC Genome Browser custom track) |
| Alignm length: | 489 |
| Alignm identity: | 339 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 96, 252 |
| Conread position: | 1-506 |
| Cow position: | chr9:9706070-9706579 (view UCSC Genome Browser custom track) |
| Alignm length: | 527 |
| Alignm identity: | 367 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 97, 121 |
| Conread position: | 1-530 |
| Cow position: | chr9:2209811-2210367 (view UCSC Genome Browser custom track) |
| Alignm length: | 564 |
| Alignm identity: | 401 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 93, 241 |
| Conread position: | 1-555 |
| Cow position: | chr9:34722425-34722987 (view UCSC Genome Browser custom track) |
| Alignm length: | 574 |
| Alignm identity: | 409 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 94, 123 |
| Conread position: | 1-568 |
| Cow position: | chr9:3148751-3148186 (view UCSC Genome Browser custom track) |
| Alignm length: | 585 |
| Alignm identity: | 412 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 94, 243 |
| Conread position: | 1-619 |
| Cow position: | chr9:28440328-28440951 (view UCSC Genome Browser custom track) |
| Alignm length: | 635 |
| Alignm identity: | 453 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 94, 243 |
| Conread position: | 1-635 |
| Cow position: | chr9:45873863-45874497 (view UCSC Genome Browser custom track) |
| Alignm length: | 645 |
| Alignm identity: | 458 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 95, 121 |
| Conread position: | 1-697 |
| Cow position: | chr9:780284-779600 (view UCSC Genome Browser custom track) |
| Alignm length: | 716 |
| Alignm identity: | 503 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 97, 31 |
| Conread position: | 1-697 |
| Cow position: | chr9:1251477-1250779 (view UCSC Genome Browser custom track) |
| Alignm length: | 715 |
| Alignm identity: | 510 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 94, 243 |
| Conread position: | 1-697 |
| Cow position: | chr9:4943292-4942591 (view UCSC Genome Browser custom track) |
| Alignm length: | 720 |
| Alignm identity: | 514 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 33, 244 |
| Conread position: | 1-697 |
| Cow position: | chr9:51211202-51211902 (view UCSC Genome Browser custom track) |
| Alignm length: | 714 |
| Alignm identity: | 522 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 118, 241 |
| Conread position: | 1-703 |
| Cow position: | chr9:44818694-44819369 (view UCSC Genome Browser custom track) |
| Alignm length: | 721 |
| Alignm identity: | 512 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 95, 11 |
| Conread position: | 1-703 |
| Cow position: | chr9:50791232-50791937 (view UCSC Genome Browser custom track) |
| Alignm length: | 720 |
| Alignm identity: | 520 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 94, 243 |
| Conread position: | 1-705 |
| Cow position: | chr9:130667-129937 (view UCSC Genome Browser custom track) |
| Alignm length: | 749 |
| Alignm identity: | 535 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 97, 201 |
| Conread position: | 1-705 |
| Cow position: | chr9:222008-221294 (view UCSC Genome Browser custom track) |
| Alignm length: | 734 |
| Alignm identity: | 518 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 94, 197 |
| Conread position: | 1-705 |
| Cow position: | chr9:3005727-3005014 (view UCSC Genome Browser custom track) |
| Alignm length: | 732 |
| Alignm identity: | 531 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 94, 215 |
| Conread position: | 1-705 |
| Cow position: | chr9:17063867-17063157 (view UCSC Genome Browser custom track) |
| Alignm length: | 722 |
| Alignm identity: | 521 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 95, 12 |
| Conread position: | 3-354 |
| Cow position: | chr9:59173623-59173260 (view UCSC Genome Browser custom track) |
| Alignm length: | 367 |
| Alignm identity: | 267 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 95, 237 |
| Conread position: | 3-457 |
| Cow position: | chr9:7003331-7003780 (view UCSC Genome Browser custom track) |
| Alignm length: | 467 |
| Alignm identity: | 344 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 95, 122 |
| Conread position: | 3-600 |
| Cow position: | chr9:27035205-27035806 (view UCSC Genome Browser custom track) |
| Alignm length: | 615 |
| Alignm identity: | 436 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 92, 120 |
| Conread position: | 3-671 |
| Cow position: | chr9:32969473-32970149 (view UCSC Genome Browser custom track) |
| Alignm length: | 705 |
| Alignm identity: | 511 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 95, 122 |
| Conread position: | 3-685 |
| Cow position: | chr9:16176294-16176962 (view UCSC Genome Browser custom track) |
| Alignm length: | 702 |
| Alignm identity: | 505 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 95, 119 |
| Conread position: | 3-694 |
| Cow position: | chr9:30672889-30673594 (view UCSC Genome Browser custom track) |
| Alignm length: | 716 |
| Alignm identity: | 534 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 94, 48 |
| Conread position: | 3-701 |
| Cow position: | chr9:29027679-29026985 (view UCSC Genome Browser custom track) |
| Alignm length: | 728 |
| Alignm identity: | 523 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 95, 54 |
| Conread position: | 3-701 |
| Cow position: | chr9:29628224-29627529 (view UCSC Genome Browser custom track) |
| Alignm length: | 722 |
| Alignm identity: | 525 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 140, 96 |
| Conread position: | 3-701 |
| Cow position: | chr9:31808093-31808807 (view UCSC Genome Browser custom track) |
| Alignm length: | 732 |
| Alignm identity: | 529 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 46, 100 |
| Conread position: | 3-701 |
| Cow position: | chr9:60277493-60276794 (view UCSC Genome Browser custom track) |
| Alignm length: | 720 |
| Alignm identity: | 522 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 92, 120 |
| Conread position: | 3-704 |
| Cow position: | chr9:10322327-10323029 (view UCSC Genome Browser custom track) |
| Alignm length: | 720 |
| Alignm identity: | 513 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 92, 67 |
| Conread position: | 3-704 |
| Cow position: | chr9:28022327-28023030 (view UCSC Genome Browser custom track) |
| Alignm length: | 722 |
| Alignm identity: | 524 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 92, 59 |
| Conread position: | 3-705 |
| Cow position: | chr9:4533019-4533724 (view UCSC Genome Browser custom track) |
| Alignm length: | 724 |
| Alignm identity: | 522 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 95, 120 |
| Conread position: | 3-705 |
| Cow position: | chr9:5004497-5005212 (view UCSC Genome Browser custom track) |
| Alignm length: | 737 |
| Alignm identity: | 526 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 92, 120 |
| Conread position: | 3-705 |
| Cow position: | chr9:6249822-6250527 (view UCSC Genome Browser custom track) |
| Alignm length: | 724 |
| Alignm identity: | 532 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 92, 120 |
| Conread position: | 3-705 |
| Cow position: | chr9:7061555-7060850 (view UCSC Genome Browser custom track) |
| Alignm length: | 736 |
| Alignm identity: | 532 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 95, 67 |
| Conread position: | 3-705 |
| Cow position: | chr9:17305454-17304749 (view UCSC Genome Browser custom track) |
| Alignm length: | 730 |
| Alignm identity: | 534 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 93, 244 |
| Conread position: | 3-705 |
| Cow position: | chr9:18509276-18508597 (view UCSC Genome Browser custom track) |
| Alignm length: | 707 |
| Alignm identity: | 515 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 92, 120 |
| Conread position: | 3-705 |
| Cow position: | chr9:22654095-22654805 (view UCSC Genome Browser custom track) |
| Alignm length: | 721 |
| Alignm identity: | 528 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 92, 120 |
| Conread position: | 3-705 |
| Cow position: | chr9:25187630-25188327 (view UCSC Genome Browser custom track) |
| Alignm length: | 724 |
| Alignm identity: | 538 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 92, 120 |
| Conread position: | 3-705 |
| Cow position: | chr9:37162291-37161583 (view UCSC Genome Browser custom track) |
| Alignm length: | 724 |
| Alignm identity: | 540 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 92, 120 |
| Conread position: | 3-705 |
| Cow position: | chr9:37970673-37969982 (view UCSC Genome Browser custom track) |
| Alignm length: | 719 |
| Alignm identity: | 522 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 95, 244 |
| Conread position: | 3-705 |
| Cow position: | chr9:47002718-47003414 (view UCSC Genome Browser custom track) |
| Alignm length: | 722 |
| Alignm identity: | 519 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 95, 111 |
| Conread position: | 3-705 |
| Cow position: | chr9:59536619-59537324 (view UCSC Genome Browser custom track) |
| Alignm length: | 725 |
| Alignm identity: | 523 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 92, 120 |
| Conread position: | 4-486 |
| Cow position: | chr9:2171583-2172066 (view UCSC Genome Browser custom track) |
| Alignm length: | 490 |
| Alignm identity: | 342 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 66, 121 |
| Conread position: | 6-705 |
| Cow position: | chr9:51181660-51180949 (view UCSC Genome Browser custom track) |
| Alignm length: | 730 |
| Alignm identity: | 533 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 92, 116 |
| Conread position: | 14-343 |
| Cow position: | chr9:26083985-26083648 (view UCSC Genome Browser custom track) |
| Alignm length: | 341 |
| Alignm identity: | 256 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 82, 94 |
| Conread position: | 17-697 |
| Cow position: | chr9:28678506-28679193 (view UCSC Genome Browser custom track) |
| Alignm length: | 709 |
| Alignm identity: | 515 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 81, 224 |
| Conread position: | 25-215 |
| Cow position: | chr9:2487565-2487362 (view UCSC Genome Browser custom track) |
| Alignm length: | 204 |
| Alignm identity: | 150 |
| Alignm E-value: | 3e-27 |
| Alignm gaps (pig, cow): | 70, 0 |
| Conread position: | 32-354 |
| Cow position: | chr9:8095939-8096264 (view UCSC Genome Browser custom track) |
| Alignm length: | 337 |
| Alignm identity: | 227 |
| Alignm E-value: | 3e-29 |
| Alignm gaps (pig, cow): | 64, 91 |
| Conread position: | 94-697 |
| Cow position: | chr9:27934994-27935598 (view UCSC Genome Browser custom track) |
| Alignm length: | 620 |
| Alignm identity: | 452 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 34, 151 |
| Conread position: | 142-705 |
| Cow position: | chr9:8166213-8165651 (view UCSC Genome Browser custom track) |
| Alignm length: | 593 |
| Alignm identity: | 407 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 58, 98 |
| Conread position: | 165-705 |
| Cow position: | chr9:2211834-2212366 (view UCSC Genome Browser custom track) |
| Alignm length: | 555 |
| Alignm identity: | 376 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 52, 67 |
| Conread position: | 199-705 |
| Cow position: | chr9:21410025-21410527 (view UCSC Genome Browser custom track) |
| Alignm length: | 522 |
| Alignm identity: | 397 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 27, 35 |
| Conread position: | 202-705 |
| Cow position: | chr9:6977072-6977562 (view UCSC Genome Browser custom track) |
| Alignm length: | 522 |
| Alignm identity: | 356 |
| Alignm E-value: | 1.96182e-44 |
| Alignm gaps (pig, cow): | 21, 32 |
| Conread position: | 240-706 |
| Cow position: | chr9:3963353-3962902 (view UCSC Genome Browser custom track) |
| Alignm length: | 480 |
| Alignm identity: | 335 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 209, 38 |
| Conread position: | 421-698 |
| Cow position: | chr9:52033640-52033911 (view UCSC Genome Browser custom track) |
| Alignm length: | 280 |
| Alignm identity: | 192 |
| Alignm E-value: | 1e-31 |
| Alignm gaps (pig, cow): | 75, 110 |
Show alignments to all cow chromosomes.