Cow genome map

Conread name: Utr1-UTR01H020100

Conread position: 1-114
Cow position:
Alignm length: 116
Alignm identity: 92
Alignm E-value: 3e-21
Alignm gaps (pig, cow): 97, 0

Conread position: 1-115
Cow position:
Alignm length: 117
Alignm identity: 95
Alignm E-value: 1e-23
Alignm gaps (pig, cow): 79, 0

Conread position: 1-122
Cow position:
Alignm length: 125
Alignm identity: 100
Alignm E-value: 1e-23
Alignm gaps (pig, cow): 86, 94

Conread position: 1-137
Cow position:
Alignm length: 140
Alignm identity: 107
Alignm E-value: 1e-22
Alignm gaps (pig, cow): 97, 123

Conread position: 1-138
Cow position:
Alignm length: 140
Alignm identity: 107
Alignm E-value: 1e-23
Alignm gaps (pig, cow): 94, 122

Conread position: 1-141
Cow position:
Alignm length: 143
Alignm identity: 115
Alignm E-value: 8e-30
Alignm gaps (pig, cow): 94, 125

Conread position: 1-157
Cow position:
Alignm length: 159
Alignm identity: 121
Alignm E-value: 7e-28
Alignm gaps (pig, cow): 94, 122

Conread position: 1-198
Cow position:
Alignm length: 212
Alignm identity: 159
Alignm E-value: 3e-31
Alignm gaps (pig, cow): 93, 0

Conread position: 1-205
Cow position:
Alignm length: 220
Alignm identity: 160
Alignm E-value: 2e-27
Alignm gaps (pig, cow): 97, 124

Conread position: 1-215
Cow position:
Alignm length: 229
Alignm identity: 175
Alignm E-value: 2e-39
Alignm gaps (pig, cow): 94, 0

Conread position: 1-251
Cow position:
Alignm length: 266
Alignm identity: 192
Alignm E-value: 1e-34
Alignm gaps (pig, cow): 96, 17

Conread position: 1-258
Cow position:
Alignm length: 269
Alignm identity: 194
Alignm E-value: 6e-38
Alignm gaps (pig, cow): 118, 96

Conread position: 1-306
Cow position:
Alignm length: 323
Alignm identity: 234
Alignm E-value: 0
Alignm gaps (pig, cow): 96, 244

Conread position: 1-321
Cow position:
Alignm length: 341
Alignm identity: 246
Alignm E-value: 0
Alignm gaps (pig, cow): 48, 125

Conread position: 1-367
Cow position:
Alignm length: 383
Alignm identity: 286
Alignm E-value: 0
Alignm gaps (pig, cow): 94, 243

Conread position: 1-370
Cow position:
Alignm length: 387
Alignm identity: 283
Alignm E-value: 0
Alignm gaps (pig, cow): 94, 107

Conread position: 1-405
Cow position:
Alignm length: 422
Alignm identity: 311
Alignm E-value: 0
Alignm gaps (pig, cow): 94, 243

Conread position: 1-411
Cow position:
Alignm length: 431
Alignm identity: 317
Alignm E-value: 0
Alignm gaps (pig, cow): 94, 244

Conread position: 1-520
Cow position:
Alignm length: 536
Alignm identity: 388
Alignm E-value: 0
Alignm gaps (pig, cow): 94, 245

Conread position: 1-556
Cow position:
Alignm length: 575
Alignm identity: 403
Alignm E-value: 0
Alignm gaps (pig, cow): 95, 34

Conread position: 1-558
Cow position:
Alignm length: 586
Alignm identity: 414
Alignm E-value: 0
Alignm gaps (pig, cow): 97, 245

Conread position: 1-606
Cow position:
Alignm length: 621
Alignm identity: 428
Alignm E-value: 0
Alignm gaps (pig, cow): 93, 201

Conread position: 1-620
Cow position:
Alignm length: 632
Alignm identity: 454
Alignm E-value: 0
Alignm gaps (pig, cow): 97, 121

Conread position: 1-621
Cow position:
Alignm length: 642
Alignm identity: 449
Alignm E-value: 0
Alignm gaps (pig, cow): 97, 81

Conread position: 1-676
Cow position:
Alignm length: 704
Alignm identity: 473
Alignm E-value: 0
Alignm gaps (pig, cow): 97, 125

Conread position: 1-676
Cow position:
Alignm length: 683
Alignm identity: 476
Alignm E-value: 0
Alignm gaps (pig, cow): 135, 102

Conread position: 1-688
Cow position:
Alignm length: 720
Alignm identity: 509
Alignm E-value: 0
Alignm gaps (pig, cow): 94, 243

Conread position: 1-697
Cow position:
Alignm length: 716
Alignm identity: 521
Alignm E-value: 0
Alignm gaps (pig, cow): 94, 230

Conread position: 1-697
Cow position:
Alignm length: 719
Alignm identity: 509
Alignm E-value: 0
Alignm gaps (pig, cow): 24, 45

Conread position: 1-697
Cow position:
Alignm length: 714
Alignm identity: 501
Alignm E-value: 0
Alignm gaps (pig, cow): 94, 243

Conread position: 1-697
Cow position:
Alignm length: 719
Alignm identity: 508
Alignm E-value: 0
Alignm gaps (pig, cow): 24, 176

Conread position: 1-697
Cow position:
Alignm length: 716
Alignm identity: 513
Alignm E-value: 0
Alignm gaps (pig, cow): 94, 243

Conread position: 1-697
Cow position:
Alignm length: 716
Alignm identity: 516
Alignm E-value: 0
Alignm gaps (pig, cow): 97, 243

Conread position: 1-697
Cow position:
Alignm length: 725
Alignm identity: 531
Alignm E-value: 0
Alignm gaps (pig, cow): 97, 245

Conread position: 1-697
Cow position:
Alignm length: 716
Alignm identity: 516
Alignm E-value: 0
Alignm gaps (pig, cow): 89, 243

Conread position: 1-697
Cow position:
Alignm length: 718
Alignm identity: 518
Alignm E-value: 0
Alignm gaps (pig, cow): 94, 161

Conread position: 1-697
Cow position:
Alignm length: 705
Alignm identity: 506
Alignm E-value: 0
Alignm gaps (pig, cow): 135, 96

Conread position: 1-697
Cow position:
Alignm length: 714
Alignm identity: 493
Alignm E-value: 0
Alignm gaps (pig, cow): 94, 243

Conread position: 1-697
Cow position:
Alignm length: 723
Alignm identity: 521
Alignm E-value: 0
Alignm gaps (pig, cow): 97, 258

Conread position: 1-697
Cow position:
Alignm length: 715
Alignm identity: 505
Alignm E-value: 0
Alignm gaps (pig, cow): 94, 212

Conread position: 1-697
Cow position:
Alignm length: 715
Alignm identity: 513
Alignm E-value: 0
Alignm gaps (pig, cow): 94, 243

Conread position: 1-697
Cow position:
Alignm length: 702
Alignm identity: 479
Alignm E-value: 0
Alignm gaps (pig, cow): 66, 100

Conread position: 1-697
Cow position:
Alignm length: 715
Alignm identity: 507
Alignm E-value: 0
Alignm gaps (pig, cow): 94, 243

Conread position: 1-697
Cow position:
Alignm length: 717
Alignm identity: 516
Alignm E-value: 0
Alignm gaps (pig, cow): 94, 80

Conread position: 1-697
Cow position:
Alignm length: 720
Alignm identity: 517
Alignm E-value: 0
Alignm gaps (pig, cow): 94, 80

Conread position: 1-697
Cow position:
Alignm length: 711
Alignm identity: 504
Alignm E-value: 0
Alignm gaps (pig, cow): 16, 123

Conread position: 1-697
Cow position:
Alignm length: 717
Alignm identity: 514
Alignm E-value: 0
Alignm gaps (pig, cow): 94, 174

Conread position: 1-697
Cow position:
Alignm length: 716
Alignm identity: 524
Alignm E-value: 0
Alignm gaps (pig, cow): 94, 444

Conread position: 1-697
Cow position:
Alignm length: 739
Alignm identity: 509
Alignm E-value: 0
Alignm gaps (pig, cow): 142, 31

Conread position: 1-697
Cow position:
Alignm length: 713
Alignm identity: 492
Alignm E-value: 0
Alignm gaps (pig, cow): 94, 173

Conread position: 1-697
Cow position:
Alignm length: 714
Alignm identity: 489
Alignm E-value: 0
Alignm gaps (pig, cow): 94, 246

Conread position: 1-697
Cow position:
Alignm length: 728
Alignm identity: 505
Alignm E-value: 0
Alignm gaps (pig, cow): 94, 24

Conread position: 1-697
Cow position:
Alignm length: 714
Alignm identity: 498
Alignm E-value: 0
Alignm gaps (pig, cow): 96, 210

Conread position: 1-697
Cow position:
Alignm length: 715
Alignm identity: 513
Alignm E-value: 0
Alignm gaps (pig, cow): 97, 55

Conread position: 1-697
Cow position:
Alignm length: 726
Alignm identity: 518
Alignm E-value: 0
Alignm gaps (pig, cow): 97, 240

Conread position: 1-697
Cow position:
Alignm length: 714
Alignm identity: 510
Alignm E-value: 0
Alignm gaps (pig, cow): 119, 89

Conread position: 1-697
Cow position:
Alignm length: 723
Alignm identity: 531
Alignm E-value: 0
Alignm gaps (pig, cow): 97, 240

Conread position: 1-697
Cow position:
Alignm length: 715
Alignm identity: 522
Alignm E-value: 0
Alignm gaps (pig, cow): 97, 245

Conread position: 1-703
Cow position:
Alignm length: 729
Alignm identity: 509
Alignm E-value: 0
Alignm gaps (pig, cow): 97, 122

Conread position: 1-704
Cow position:
Alignm length: 723
Alignm identity: 524
Alignm E-value: 0
Alignm gaps (pig, cow): 94, 124

Conread position: 1-704
Cow position:
Alignm length: 722
Alignm identity: 506
Alignm E-value: 0
Alignm gaps (pig, cow): 94, 230

Conread position: 1-705
Cow position:
Alignm length: 724
Alignm identity: 517
Alignm E-value: 0
Alignm gaps (pig, cow): 94, 197

Conread position: 1-705
Cow position:
Alignm length: 740
Alignm identity: 550
Alignm E-value: 0
Alignm gaps (pig, cow): 94, 39

Conread position: 1-705
Cow position:
Alignm length: 723
Alignm identity: 531
Alignm E-value: 0
Alignm gaps (pig, cow): 97, 245

Conread position: 1-705
Cow position:
Alignm length: 722
Alignm identity: 507
Alignm E-value: 0
Alignm gaps (pig, cow): 94, 105

Conread position: 1-705
Cow position:
Alignm length: 724
Alignm identity: 508
Alignm E-value: 0
Alignm gaps (pig, cow): 97, 16

Conread position: 1-705
Cow position:
Alignm length: 723
Alignm identity: 523
Alignm E-value: 0
Alignm gaps (pig, cow): 118, 26

Conread position: 1-706
Cow position:
Alignm length: 724
Alignm identity: 518
Alignm E-value: 0
Alignm gaps (pig, cow): 94, 243

Conread position: 1-706
Cow position:
Alignm length: 725
Alignm identity: 515
Alignm E-value: 0
Alignm gaps (pig, cow): 50, 232

Conread position: 1-706
Cow position:
Alignm length: 724
Alignm identity: 527
Alignm E-value: 0
Alignm gaps (pig, cow): 94, 243

Conread position: 1-707
Cow position:
Alignm length: 733
Alignm identity: 519
Alignm E-value: 0
Alignm gaps (pig, cow): 97, 77

Conread position: 2-494
Cow position:
Alignm length: 514
Alignm identity: 345
Alignm E-value: 0
Alignm gaps (pig, cow): 94, 76

Conread position: 2-547
Cow position:
Alignm length: 558
Alignm identity: 378
Alignm E-value: 0
Alignm gaps (pig, cow): 85, 123

Conread position: 2-697
Cow position:
Alignm length: 712
Alignm identity: 507
Alignm E-value: 0
Alignm gaps (pig, cow): 96, 241

Conread position: 3-157
Cow position:
Alignm length: 157
Alignm identity: 115
Alignm E-value: 1e-22
Alignm gaps (pig, cow): 67, 120

Conread position: 3-203
Cow position:
Alignm length: 217
Alignm identity: 161
Alignm E-value: 7e-29
Alignm gaps (pig, cow): 67, 78

Conread position: 3-228
Cow position:
Alignm length: 240
Alignm identity: 171
Alignm E-value: 2e-29
Alignm gaps (pig, cow): 93, 234

Conread position: 3-269
Cow position:
Alignm length: 282
Alignm identity: 198
Alignm E-value: 3e-32
Alignm gaps (pig, cow): 70, 79

Conread position: 3-314
Cow position:
Alignm length: 329
Alignm identity: 234
Alignm E-value: 9.99967e-42
Alignm gaps (pig, cow): 92, 173

Conread position: 3-352
Cow position:
Alignm length: 367
Alignm identity: 270
Alignm E-value: 0
Alignm gaps (pig, cow): 93, 120

Conread position: 3-352
Cow position:
Alignm length: 354
Alignm identity: 231
Alignm E-value: 8e-30
Alignm gaps (pig, cow): 86, 96

Conread position: 3-396
Cow position:
Alignm length: 413
Alignm identity: 264
Alignm E-value: 0
Alignm gaps (pig, cow): 94, 241

Conread position: 3-406
Cow position:
Alignm length: 420
Alignm identity: 314
Alignm E-value: 0
Alignm gaps (pig, cow): 92, 18

Conread position: 3-412
Cow position:
Alignm length: 427
Alignm identity: 270
Alignm E-value: 0
Alignm gaps (pig, cow): 92, 243

Conread position: 3-414
Cow position:
Alignm length: 436
Alignm identity: 311
Alignm E-value: 0
Alignm gaps (pig, cow): 92, 120

Conread position: 3-656
Cow position:
Alignm length: 669
Alignm identity: 484
Alignm E-value: 0
Alignm gaps (pig, cow): 92, 395

Conread position: 3-676
Cow position:
Alignm length: 701
Alignm identity: 523
Alignm E-value: 0
Alignm gaps (pig, cow): 95, 219

Conread position: 3-697
Cow position:
Alignm length: 721
Alignm identity: 530
Alignm E-value: 0
Alignm gaps (pig, cow): 95, 60

Conread position: 3-698
Cow position:
Alignm length: 718
Alignm identity: 533
Alignm E-value: 0
Alignm gaps (pig, cow): 60, 125

Conread position: 3-698
Cow position:
Alignm length: 713
Alignm identity: 529
Alignm E-value: 0
Alignm gaps (pig, cow): 95, 120

Conread position: 3-701
Cow position:
Alignm length: 717
Alignm identity: 528
Alignm E-value: 0
Alignm gaps (pig, cow): 94, 122

Conread position: 3-701
Cow position:
Alignm length: 736
Alignm identity: 522
Alignm E-value: 0
Alignm gaps (pig, cow): 92, 120

Conread position: 3-704
Cow position:
Alignm length: 716
Alignm identity: 505
Alignm E-value: 0
Alignm gaps (pig, cow): 115, 244

Conread position: 3-705
Cow position:
Alignm length: 732
Alignm identity: 534
Alignm E-value: 0
Alignm gaps (pig, cow): 95, 122

Conread position: 3-705
Cow position:
Alignm length: 726
Alignm identity: 525
Alignm E-value: 0
Alignm gaps (pig, cow): 92, 120

Conread position: 3-705
Cow position:
Alignm length: 725
Alignm identity: 531
Alignm E-value: 0
Alignm gaps (pig, cow): 92, 399

Conread position: 3-705
Cow position:
Alignm length: 724
Alignm identity: 535
Alignm E-value: 0
Alignm gaps (pig, cow): 95, 120

Conread position: 3-705
Cow position:
Alignm length: 731
Alignm identity: 540
Alignm E-value: 0
Alignm gaps (pig, cow): 95, 242

Conread position: 3-705
Cow position:
Alignm length: 726
Alignm identity: 531
Alignm E-value: 0
Alignm gaps (pig, cow): 95, 52

Conread position: 3-705
Cow position:
Alignm length: 724
Alignm identity: 524
Alignm E-value: 0
Alignm gaps (pig, cow): 92, 44

Conread position: 3-705
Cow position:
Alignm length: 727
Alignm identity: 536
Alignm E-value: 0
Alignm gaps (pig, cow): 92, 120

Conread position: 3-705
Cow position:
Alignm length: 730
Alignm identity: 517
Alignm E-value: 0
Alignm gaps (pig, cow): 96, 242

Conread position: 4-697
Cow position:
Alignm length: 726
Alignm identity: 535
Alignm E-value: 0
Alignm gaps (pig, cow): 94, 13

Conread position: 4-705
Cow position:
Alignm length: 730
Alignm identity: 511
Alignm E-value: 0
Alignm gaps (pig, cow): 94, 51

Conread position: 5-681
Cow position:
Alignm length: 695
Alignm identity: 513
Alignm E-value: 0
Alignm gaps (pig, cow): 144, 116

Conread position: 5-705
Cow position:
Alignm length: 720
Alignm identity: 518
Alignm E-value: 0
Alignm gaps (pig, cow): 65, 8

Conread position: 8-697
Cow position:
Alignm length: 707
Alignm identity: 499
Alignm E-value: 0
Alignm gaps (pig, cow): 90, 236

Conread position: 8-705
Cow position:
Alignm length: 729
Alignm identity: 523
Alignm E-value: 0
Alignm gaps (pig, cow): 90, 240

Conread position: 14-705
Cow position:
Alignm length: 712
Alignm identity: 509
Alignm E-value: 0
Alignm gaps (pig, cow): 81, 111

Conread position: 19-646
Cow position:
Alignm length: 646
Alignm identity: 463
Alignm E-value: 0
Alignm gaps (pig, cow): 71, 223

Conread position: 22-273
Cow position:
Alignm length: 262
Alignm identity: 194
Alignm E-value: 3.00004e-41
Alignm gaps (pig, cow): 126, 99

Conread position: 29-697
Cow position:
Alignm length: 693
Alignm identity: 495
Alignm E-value: 0
Alignm gaps (pig, cow): 66, 94

Conread position: 32-705
Cow position:
Alignm length: 702
Alignm identity: 522
Alignm E-value: 0
Alignm gaps (pig, cow): 66, 58

Conread position: 40-697
Cow position:
Alignm length: 675
Alignm identity: 479
Alignm E-value: 0
Alignm gaps (pig, cow): 58, 5

Conread position: 137-705
Cow position:
Alignm length: 582
Alignm identity: 429
Alignm E-value: 0
Alignm gaps (pig, cow): 89, 75

Conread position: 137-706
Cow position:
Alignm length: 584
Alignm identity: 406
Alignm E-value: 0
Alignm gaps (pig, cow): 29, 191

Conread position: 140-444
Cow position:
Alignm length: 309
Alignm identity: 190
Alignm E-value: 4.06377e-44
Alignm gaps (pig, cow): 77, 92

Conread position: 178-705
Cow position:
Alignm length: 535
Alignm identity: 353
Alignm E-value: 2e-38
Alignm gaps (pig, cow): 295, 9

Conread position: 235-704
Cow position:
Alignm length: 473
Alignm identity: 344
Alignm E-value: 0
Alignm gaps (pig, cow): 245, 12

Conread position: 248-697
Cow position:
Alignm length: 462
Alignm identity: 339
Alignm E-value: 0
Alignm gaps (pig, cow): 84, 136

Conread position: 287-697
Cow position:
Alignm length: 424
Alignm identity: 314
Alignm E-value: 0
Alignm gaps (pig, cow): 46, 101

Conread position: 301-705
Cow position:
Alignm length: 417
Alignm identity: 304
Alignm E-value: 0
Alignm gaps (pig, cow): 31, 45

Conread position: 308-697
Cow position:
Alignm length: 405
Alignm identity: 299
Alignm E-value: 0
Alignm gaps (pig, cow): 24, 31

Conread position: 376-626
Cow position:
Alignm length: 264
Alignm identity: 184
Alignm E-value: 2e-29
Alignm gaps (pig, cow): 26, 165

Conread position: 376-706
Cow position:
Alignm length: 341
Alignm identity: 240
Alignm E-value: 0
Alignm gaps (pig, cow): 74, 163

Conread position: 390-697
Cow position:
Alignm length: 310
Alignm identity: 227
Alignm E-value: 0
Alignm gaps (pig, cow): 229, 12

Conread position: 390-697
Cow position:
Alignm length: 320
Alignm identity: 242
Alignm E-value: 0
Alignm gaps (pig, cow): 90, 26

Conread position: 402-697
Cow position:
Alignm length: 308
Alignm identity: 225
Alignm E-value: 1.4013e-45
Alignm gaps (pig, cow): 60, 14

Conread position: 402-706
Cow position:
Alignm length: 317
Alignm identity: 242
Alignm E-value: 0
Alignm gaps (pig, cow): 48, 26

Conread position: 404-697
Cow position:
Alignm length: 305
Alignm identity: 219
Alignm E-value: 2e-37
Alignm gaps (pig, cow): 59, 12

Conread position: 416-705
Cow position:
Alignm length: 305
Alignm identity: 220
Alignm E-value: 7e-39
Alignm gaps (pig, cow): 36, 75

Conread position: 421-698
Cow position:
Alignm length: 279
Alignm identity: 191
Alignm E-value: 7e-29
Alignm gaps (pig, cow): 203, 44

Show alignments to all cow chromosomes.